Ca_04866, Ca_04866_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_04866
Unique NameCa_04866_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length1896
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:31649247..31655811 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR368Pisum sativum Cameor genome v1aPisum sativum
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR384Pisum sativum Cameor genome v1aPisum sativum
capsR394Pisum sativum Cameor genome v1aPisum sativum
capsR428Pisum sativum Cameor genome v1aPisum sativum
cavuR407Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR423Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR454Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR513Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0709Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0339Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0392Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0479Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0763Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1063Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1138Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL041Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL201Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL749Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR385Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR364Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR365Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR401Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR368Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR370Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR421Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR403Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR433Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR419Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR432Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR472Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR408Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR438Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR399Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR413Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR186Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL264Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL560Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL689Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL761Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR377Cicer arietinum
cacarR393Cicer arietinum
cacarR427Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Va04G070230.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat05G0039200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_05430Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Tiffany.R1.2g168600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_019387Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun09g256500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.009G019400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr09.1216Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_09729Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat5g012400.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Hedin2.R1.2g208120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan09g034700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
jg55986.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_014646838.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004500861.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_04866-CDS1Ca_04866-CDS1Cicer arietinumCDS
Ca_04866-CDS2Ca_04866-CDS2Cicer arietinumCDS
Ca_04866-CDS3Ca_04866-CDS3Cicer arietinumCDS
Ca_04866-CDS4Ca_04866-CDS4Cicer arietinumCDS
Ca_04866-CDS5Ca_04866-CDS5Cicer arietinumCDS
Ca_04866-CDS6Ca_04866-CDS6Cicer arietinumCDS
Ca_04866-CDS7Ca_04866-CDS7Cicer arietinumCDS
Ca_04866-CDS8Ca_04866-CDS8Cicer arietinumCDS
Ca_04866-CDS9Ca_04866-CDS9Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_04866_v1.0_kabuliCa_04866_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_04866 vs. SwissProt
Match: PUS2_ARATH (RNA pseudouridine synthase 2, chloroplastic OS=Arabidopsis thaliana GN=At1g76050 PE=2 SV=1)

HSP 1 Score: 494.582 bits (1272), Expect = 9.224e-139
Identity = 249/380 (65.53%), Postives = 302/380 (79.47%), Query Frame = 1 
Query:  757 PKSNYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTED---SDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIG 1887
            P+ N AG+R+EEIVD     GK+RLD+WISSRING+SRARVQSSI+ GLV VNGR+VDKVS NV++GDE+ CTI+ELQ L+A  E+IPLDIVYED+H+LV+NKPAHMVVHPAPGN +GTLVNGILHHC+LP V++S  E   D+++   SDDE     + +PS          AS+RPGIVHRLDKGT+GLLVVAKDEHSH  L+EQFKL TI+RVY+SLT GVP+P  GR+E+P+GRD +NR+RM A+ G +   +ARHAASRYKVIE  AGG  ALVEW+LETGRTHQIRAHA+Y+GVPLLGDEVYGGTK+M LSLL+ R + S   E+ +++S +DRPCLHA+ LGF HP TGE V FSC PP D  EI+  LRR G
Sbjct:   62 PRVNNAGLRIEEIVDAA--KGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNVKSGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLPCVDYSNSEEDDDSDEETFSDDEE---MTTSPSSYA-------ASVRPGIVHRLDKGTTGLLVVAKDEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRGGRARHAASRYKVIETFAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVSRSDQEEIIELISRMDRPCLHAIVLGFTHPCTGEIVKFSCPPPSDLAEIVGLLRRSG 429
[Close]
BLAST of Ca_04866 vs. SwissProt
Match: PUS2_ORYSJ (RNA pseudouridine synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0717400 PE=2 SV=1)

HSP 1 Score: 465.307 bits (1196), Expect = 5.993e-130
Identity = 235/393 (59.80%), Postives = 291/393 (74.05%), Query Frame = 1 
Query:  727 LADDSNSNGEPKSN---YAGVRLEEIVDGEIKSGKLRLDTWISSRING--ISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDT--EDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 1884
            LA D+N+     S    + G RLEE V      G+ R+D WIS+R+ G  +SRAR+Q+SI+AGLV VNGR V KVS  V+ GD + CT+ ELQ LRA PE+IPLDIVYED+HLLV+NKPAHMVVHPAPGN +GTLVN ILHHC +         ++ D   + SDD+++ F     +   + S +  A +RPGIVHRLDKGTSGLLVVAKDEHSH +L+EQFKL TI+RVYISLT G P P +GR+EVP+ RDPNNR+RM A  G      ARHAASRYKV E+ AGG  ALVEW+LETGRTHQIRAHA+YLG+PLLGDE YGGTK+M LSLLRPRT    H +++ M+S++DRPCLHA  LGF+HPH+G+ + FSC PP DF E+L++L ++
Sbjct:   39 LAADANAEAVAPSRRGGHGGTRLEEAVPAG--EGRSRIDAWISARLGGGGVSRARIQASIRAGLVVVNGRPVSKVSHMVKGGDIVSCTVLELQPLRAEPEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNAILHHCKISTFTCLARNSIDDECPDSSDDDIDVFDIDQFTTGEVSSEVREALVRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNNRIRMIATPGS-GHRYARHAASRYKVREVFAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDETYGGTKSMALSLLRPRTPSRYHCDLSNMISKIDRPCLHAALLGFKHPHSGKILEFSCPPPDDFTEVLNELHQV 428
[Close]
BLAST of Ca_04866 vs. SwissProt
Match: Y723_CHLP8 (Uncharacterized RNA pseudouridine synthase Cpar_0723 OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_0723 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.411e-54
Identity = 134/356 (37.64%), Postives = 194/356 (54.49%), Query Frame = 1 
Query:  823 LRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGE-MTKMVSEL-DRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 1884
            +R+D +++ ++  ++R +VQ++I+ G V VNG+ V K ++ V++ D I  T          PE+IP+ I+YED+ L+VI+K A MVVHPA GN +GTL N ILHH      E  K E                                 +RPGIVHRLDK TSGL+++AK+  +  KL+ QF  R +++VY ++  GVP   +G ++  +GR   NR  M     P    + +HA + Y+V+E L  G  +L++  L TGRTHQIR H ++LG  +LGDE YGG          PRT P    E  T+ + EL  R  LHA TL F+ P TGE + FS   P D   +L ++R +
Sbjct:   12 MRIDRYLTQQVENMTRNKVQAAIEEGRVLVNGKPV-KSNYRVKSCDHIHLTFLRPPAPELAPEDIPITILYEDDDLMVIDKEAGMVVHPAFGNWTGTLANAILHHLGKDADELDKTE---------------------------------MRPGIVHRLDKDTSGLIIIAKNPTALHKLARQFANRQVEKVYKAIVWGVPKAESGTIKTNIGRSHKNRKVMANF--PYEGAEGKHAITDYQVVEDL--GYFSLMDVTLHTGRTHQIRVHLQHLGHSILGDETYGGA--------TPRTLPFSKSEPFTRNLLELMSRQALHAQTLRFRQPTTGEPLSFSAPLPEDMELVLEKIRTV 321
[Close]
BLAST of Ca_04866 vs. SwissProt
Match: YLYB_BACSU (Uncharacterized RNA pseudouridine synthase YlyB OS=Bacillus subtilis (strain 168) GN=ylyB PE=3 SV=3)

HSP 1 Score: 214.542 bits (545), Expect = 1.842e-54
Identity = 130/354 (36.72%), Postives = 183/354 (51.69%), Query Frame = 1 
Query:  826 RLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIG 1887
            R+D +++S  N  SR +VQ  +K G V VNG  V K ++ ++ GD++  T+ E + L  + E + LDI YED+ +LV+NKP  MVVHPAPG+ +GTLVNG++ HC                     +L+G                   +RPGIVHR+DK TSGLL+VAK++ +H  L  Q   +T+ R Y ++  G+ +   G ++ P+GRD  +R  MT       ++   H   R++           LVE +LETGRTHQIR H +Y+G PL GD  YG           PR T   +G+            LHA  LGF HP TGE V F    P D  E++  LR+ G
Sbjct:   16 RIDKFLASTENDWSRTQVQQWVKDGQVVVNGSAV-KANYKIQPGDQVTVTVPEPEALDVLAEPMDLDIYYEDQDVLVVNKPRGMVVHPAPGHLTGTLVNGLMAHCT--------------------DLSGINGV---------------MRPGIVHRIDKDTSGLLMVAKNDMAHESLVNQLVNKTVTRKYTAVVHGLISHDDGTIDAPIGRDKKDRQSMTVTRDGKNAVTHFHVLERFQ--------DFTLVECQLETGRTHQIRVHMKYIGFPLAGDPKYG-----------PRKTIDFNGQ-----------ALHAGVLGFDHPRTGEYVEFEAPLPEDMAELIENLRKNG 303
[Close]
BLAST of Ca_04866 vs. SwissProt
Match: Y1629_SYNY3 (Uncharacterized RNA pseudouridine synthase slr1629 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1629 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.331e-49
Identity = 124/353 (35.13%), Postives = 181/353 (51.27%), Query Frame = 1 
Query:  823 LRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRR 1881
            +RLD W++ ++  +SR+R Q  I++G V  NG +    +  ++ GD +   I EL  L  V +NIPLDI+YEDE L++INKPA +VVHP PG+  GT+VN +L HC                              P   G+         RPGIVHRLDK T+G +VVAK E +   L  Q K +T +R+Y  +  G P  + G V +PVGR P +R +M  V         R A + ++++E +  G+ + +E++LETGRTHQIR H++ +G PL+GD +Y              T+P        +   L    LHA  L   HP +GE +      P  F ++L  LR+
Sbjct:   32 VRLDKWLAEQLPELSRSRCQKLIESGQVQRNGLVCQDKNLILKTGDRLVVNIPELIPLDVVAQNIPLDILYEDEQLIIINKPAGLVVHPGPGHPDGTVVNALLAHC------------------------------PDLAGIGGVQ-----RPGIVHRLDKDTTGAMVVAKTELALHNLQVQLKEKTARRLYWGIVYGSPKEIQGTVNLPVGRHPGDRQKMGIVP---VEKGGREAVTHWRLLERI--GNHSWLEFQLETGRTHQIRVHSKQMGHPLVGDNLY--------------TSPG------SVNVNLPGQALHAHQLSLIHPVSGEIITAIAPMPAHFEKLLVYLRQ 324
[Close]
BLAST of Ca_04866 vs. SwissProt
Match: Y901_CHLAA (Uncharacterized RNA pseudouridine synthase Caur_0901 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=Caur_0901 PE=3 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 3.976e-49
Identity = 131/351 (37.32%), Postives = 182/351 (51.85%), Query Frame = 1 
Query:  826 RLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLR 1878
            R+D +++  +  +SRA+VQ  I+ G V  +GR   + S  VR G  I+ TI        V E IPLD+VYED  + VINKPA MVVHPAPG+  GTLVN +L     P++    +                                  +RPGIVHRLD+ TSGLLV+A+ + +   L +Q + R ++++Y +L  G P P  G ++ P+GRDP +RLRM  V         R A + Y++++    G  +L+E +LETGRTHQIR H R+LG P++GD VYG           PR +  LH         L R  LHA  LG  HP +G    F+   P D   +L QL+
Sbjct:   27 RIDRFLAGAMPDLSRAQVQRLIEQGFVLYDGRS-PRASQPVRPGAVIQLTIPPPIPTELVAEPIPLDVVYEDADIAVINKPAGMVVHPAPGHPRGTLVNALL--ARYPDLAIGGE----------------------------------LRPGIVHRLDRDTSGLLVIARHDQAMRSLVDQQQARRMRKIYQALVIGRP-PETGTIDAPIGRDPRDRLRMAVVPD------GRPARTHYRLLDTF--GDYSLLEVQLETGRTHQIRVHLRHLGYPIVGDPVYG-----------PRRS-HLH---------LSRQFLHAAYLGLVHPRSGRWQEFTAPLPADLQIVLRQLQ 310
[Close]
BLAST of Ca_04866 vs. SwissProt
Match: RLUD_ZYMMO (Ribosomal large subunit pseudouridine synthase D OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=rluD PE=3 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 5.192e-49
Identity = 132/351 (37.61%), Postives = 182/351 (51.85%), Query Frame = 1 
Query:  826 RLDTWISSRINGISRARVQSSIKAGLV-HVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQL 1875
            RLD  ++S I  +SR R+++ I +G V +  G LV   +F +++ D     I   +     P++IPL+IV+EDEHLLV+NKPA MVVHPA GN   TLVN +L+HC                     +L+G    A               RPGIVHR+DK TSGLLVVAK + +H  L+ QF   +I R Y ++  G P+ + G V+ P+ R   NR +M  V    +  + + A + Y++I  L   S  L+E +LETGRTHQ+R H   +G  LLGD VYG +K    +LL+                   R  LHA  LGF HP +G+QV F  E P D   +   L
Sbjct:   16 RLDRALASLITRLSRERLKNLISSGCVSNSQGALVRDPAFKIKSLDCFTVDIPLPRPAHNEPQDIPLEIVFEDEHLLVVNKPAGMVVHPAAGNYDNTLVNALLYHCA-------------------GKLSGIGGVA---------------RPGIVHRIDKDTSGLLVVAKTDPAHAGLAAQFADHSINRRYRAIVDGHPS-LQGHVDAPLARSSVNRQKMAIV----SDGRGKRAVTHYRMITPLKNAS--LIECRLETGRTHQVRVHMSSIGHSLLGDPVYGRSKKAHHALLQSLA--------------FQRQALHAAHLGFIHPISGKQVDFDAEMPQDMQLLFKML 311
[Close]
BLAST of Ca_04866 vs. SwissProt
Match: Y1758_AQUAE (Uncharacterized RNA pseudouridine synthase aq_1758 OS=Aquifex aeolicus (strain VF5) GN=aq_1758 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 5.741e-48
Identity = 120/366 (32.79%), Postives = 184/366 (50.27%), Query Frame = 1 
Query:  778 VRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQL 1875
            +++ E+++ +++  + RLD +++      SR+ ++  +K GLV+VNG  V K S  +R G+ +   + E + L   PENIP++I+YEDE + V+ KP  +VVHP+PG TSGTLVN +L+H                                S  G++        RPGIVHRLDK T+G++V+AK+  +H  L  QF+ R  ++ Y  L  G+     G ++ P+ R P +R R           + + A + Y V++        L++ K+ TGRTHQIR H   +G P+LGD  YG   + V     P+   SL GE   ++         A  LGF HP  GE + F  E P  F  + S L
Sbjct:    1 MKISEVLEFKVEGEEERLDKFLARAYPDFSRSYIKKLVKEGLVYVNGEEVRKPSRKLREGERVILHVPEPEPLDVKPENIPINIIYEDEDIAVVEKPCGLVVHPSPGYTSGTLVNALLYHIK---------------------------DLSSIGGVE--------RPGIVHRLDKETAGVMVIAKNNTAHRNLVRQFQERKTEKFYKVLVKGLVKKDYGAIDTPIARHPVDRKRF------WVRKEGKEALTEYWVLKRYEKYEITLLKVKIHTGRTHQIRVHFASIGHPVLGDRTYGFKSSSV-----PKELLSLMGECNMLI---------AYHLGFYHPTKGEWMVFEIEEPETFKSVYSWL 311
[Close]
BLAST of Ca_04866 vs. SwissProt
Match: RLUD_RALSO (Ribosomal large subunit pseudouridine synthase D OS=Ralstonia solanacearum (strain GMI1000) GN=rluD PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 7.498e-48
Identity = 137/369 (37.13%), Postives = 187/369 (50.68%), Query Frame = 1 
Query:  778 VRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRA-VPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEI--LAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQL 1875
            V + E + GE      RLD  ++  +   SR+R+Q  I AG V V G  V +    V  GD I+          A V E + LD+VYED+ LLVINKPA +VVHPA GN SGT++NG+LH                              + P   GL         R GIVHRLDK TSGL+VVA+   +   L  Q + RT+KR Y++L  G  TP AG ++ P+GRDP +R RM  +     +   + A + +K +++  L     +LV+ +LETGRTHQIR H    G PLLGD VY  T+N      RP+T  +       + +   R  LHA+ LG  HP +G+ VH+    P D  E++  L
Sbjct:   41 VEIPEALHGE------RLDKALAKLLPDYSRSRLQQWIDAGAVRVGGAAV-RPRAAVCGGDRIEVVPQRADDENAFVAEPVDLDVVYEDDTLLVINKPAGLVVHPAAGNWSGTVLNGLLH------------------------------RYPQAAGLP--------RAGIVHRLDKETSGLMVVARTLPAQTDLVRQLQARTVKRTYLALVWG-ETPEAGTIDAPIGRDPRDRTRMAII----ETASGKPARTHFKTLDVVDLGRAQVSLVQCQLETGRTHQIRVHFESEGHPLLGDPVY--TRNFRRG--RPQTIKA------PLPAPFARQALHAVRLGLVHPASGQSVHWHAGVPDDLAELMDAL 349
[Close]
BLAST of Ca_04866 vs. SwissProt
Match: RLUD_NEIMA (Ribosomal large subunit pseudouridine synthase D OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=rluD PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.083e-46
Identity = 141/387 (36.43%), Postives = 194/387 (50.13%), Query Frame = 1 
Query:  736 DSNSNGEPKSNYAGV-----RLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQK-LRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLR 1878
            D+ S+    S++A       R+   V  E+  G  RLD  ++  +   SR+R+   IK G V VN +   +    +  G++I+ T+   ++ L  VPE + LDIVYED+ ++V+NKPA +VVHPA GN +GTL+NG+L HC                     EL    SQ P              R GIVHRLDK TSGL+VVAK   +   L  Q + RT+KR+Y ++  G+  P  G++E  +GRDP+NRL+M  V         + A +  KV+E     S   +E  LETGRTHQIR H R    PL GD VYG  ++     ++         E  K +    R  LHA  L F HP +GE V F    P D   +LS LR
Sbjct:    7 DNESDYSDDSDFASASETENRIGLTVPLELAGG--RLDAVLAKLLPDYSRSRLTLWIKEGAVIVNDK-PSQPKDKMIGGEQIRVTVRPSEENLAFVPEPMALDIVYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHC--------------------PEL----SQIP--------------RAGIVHRLDKETSGLMVVAKTLPAQNSLVWQLQERTVKRIYRAVANGI-VPFDGKIETQIGRDPHNRLKMAVV-----KFGGKPAVTHVKVLERYLAHS--YIECSLETGRTHQIRVHMREANHPLAGDPVYGNPRHPCGDTVK---------EAVKSLGA--RQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLR 333
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BLAST of Ca_04866 vs. TrEMBL
Match: G7J5V2_MEDTR (RNA pseudourine synthase OS=Medicago truncatula GN=MTR_3g114540 PE=3 SV=1)

HSP 1 Score: 699.508 bits (1804), Expect = 0.000e+0
Identity = 362/436 (83.03%), Postives = 387/436 (88.76%), Query Frame = 1 
Query:  625 ATRAFQSQFRTXXXXXXXXXXXXXX--RGVARAVSGLADDSNSNGE-PKSNYAGVRLEEIV-DGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDK---------VSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIGRQ 1893
            +T+AFQ  FRT                  +A++ S  ++DSNS+ E PKSNYAGV LEEIV DG IKSGKLRLD+WISSRINGISRARVQSSIKAGLVHVNGR+VDK         VSFNVRAGDEIKCTIAELQ+LRAVPENIPLDIVYED+HLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSK+EALSDTEDSDDELNGF+SQ+ S  GLDSRLS+ASIRPGIVHRLDKGTSGLLVVAK+EHSHMKLSEQFKLRTIKRVY+SLTAGVPTPV+GRVEVPVGRDPNNRLRM AVAG + S+KARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHA+YLGVPLLGDEVYGGTK+MVLSLLRPRTTPSLH EM K VS LDRPCLHA TLGFQHPHTGEQVHFSCEPPVDFN+ILSQLRRIG +
Sbjct:   16 STKAFQFHFRTSSSPFFFSPLNNFKLRSSIAKSFSTFSNDSNSSTEEPKSNYAGVLLEEIVHDGGIKSGKLRLDSWISSRINGISRARVQSSIKAGLVHVNGRVVDKLSIVVILEQVSFNVRAGDEIKCTIAELQQLRAVPENIPLDIVYEDDHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEALSDTEDSDDELNGFSSQSSSSVGLDSRLSMASIRPGIVHRLDKGTSGLLVVAKNEHSHMKLSEQFKLRTIKRVYVSLTAGVPTPVSGRVEVPVGRDPNNRLRMIAVAGLVNSVKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHAKYLGVPLLGDEVYGGTKSMVLSLLRPRTTPSLHSEMFKTVSGLDRPCLHASTLGFQHPHTGEQVHFSCEPPVDFNDILSQLRRIGSE 451
[Close]
BLAST of Ca_04866 vs. TrEMBL
Match: I1JSZ4_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 687.567 bits (1773), Expect = 0.000e+0
Identity = 348/427 (81.50%), Postives = 375/427 (87.82%), Query Frame = 1 
Query:  625 ATRAFQSQFRTXXXXXXXXXXXXXX--RGVARAVSGLADDSNSNGEPKSNYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIAS--IRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIGRQ 1893
            A+RAFQ QF+T                   A A SG A DS+S+GEPK N++GVRLEE VD  I SGKLRLD WISSRINGISRARVQSSIK+GLVHVNGR+VDKVSFNV++GDEIKCTIAELQ LRAVP+NIPLDIVYEDEH+LVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDE N + S A SCEGL+SRLS+AS  IRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFK RTIKR+Y+SLTAGVPTPVAGRVEVPVGRD NNR+RMTAV GP+ S KAR+AASRYKVIEILAGGSC+LVEWKLETGRTHQIRAHA+YLGVPLLGDE+YGGTK+MVLSLLRPRT  SLH ++ KMVS LDRPCLHA TLGFQHPHTGEQVHFSCEPP DF EILSQLRRIG +
Sbjct:   14 ASRAFQFQFQTAPSPSLFLSATSYKFRSATASAASGSAGDSDSDGEPKLNFSGVRLEEAVDSRIGSGKLRLDNWISSRINGISRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAELQNLRAVPQNIPLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDEFNSYISLASSCEGLNSRLSVASNSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKQRTIKRLYVSLTAGVPTPVAGRVEVPVGRDTNNRIRMTAVTGPVNSKKARYAASRYKVIEILAGGSCSLVEWKLETGRTHQIRAHAKYLGVPLLGDELYGGTKSMVLSLLRPRTPISLHSKIVKMVSRLDRPCLHAWTLGFQHPHTGEQVHFSCEPPADFAEILSQLRRIGSE 440
[Close]
BLAST of Ca_04866 vs. TrEMBL
Match: E0CQW6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00960 PE=3 SV=1)

HSP 1 Score: 542.347 bits (1396), Expect = 2.075e-151
Identity = 278/395 (70.38%), Postives = 318/395 (80.51%), Query Frame = 1 
Query:  739 SNSNGEP-------KSNYAGVRLEE-IVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTS--QAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIGRQ 1893
            SNS  EP       ++NYAGVRLEE +VD    SGKLRLD+WISSRI GISRARVQSSI++GLV VN R+VDKVS  +RAGD++ CTI+ELQ LRA PE+IPLDIVYEDEH+LV+NKPAHMVVHPAPGN SGTLVNGILHHC+LP V     ++  D + SDDE N F +     +CE         +IRPGIVHRLDKGTSGLLVVAKDEHSH  LSEQFKL +I RVYISLT+GVPTP++GRVE+PVGRDPNNR+RMTAV GP  S +ARHAASRYKVIEILA G  ALVEW+LETGRTHQIRAHA+YLG+PLLGDEVYGGTKNM LSLLRPR   S HG++ ++VS LDRPCLHA+ LGF HP TG+ VHFSC+PP DF EILS LR+I  +
Sbjct:   41 SNSTDEPLVSVSGRRTNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNGILHHCSLPTVALPNRDSEED-DISDDEFNSFAAGQNCGTCE--------TNIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKISTE 426
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BLAST of Ca_04866 vs. TrEMBL
Match: K4BVS1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc04g081920.2 PE=3 SV=1)

HSP 1 Score: 528.865 bits (1361), Expect = 2.374e-147
Identity = 263/400 (65.75%), Postives = 322/400 (80.50%), Query Frame = 1 
Query:  706 VARAVSGLADDSNSNGEP------KSNYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTED-SDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 1884
            + RA +    DS+S+  P      +SNY+GV+LEE VD   K+GKLRLD+W+SSRI+G+SRARVQSSI++GLV VNGR+ DKVS  V+ GD++ CTIA+L+ LRA PE+IPLDIVYEDEH+LV+NKPAHMVVHPAPGN +GTLV+GILHHC+LP V F  +E LSD ED SDDELN F+          S +  +S+RPGIVHRLDKGTSGLLVVAK+EHS   L+EQFK  TIKRVY+S+T GVP  VAGRV++P+GRD NNR+RM A+ G   S K+RHA SRYKVIE LAGG  ALVEW+LETGRTHQIRAHA++LG+PL+GDEVYGGTKNM LSLL+P+T P  HGE++++VS++DRPCLHA+TLGF+HP TGE +HF+  PP DF EILS+LR I
Sbjct:   28 ICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDS--KTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLMGDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAI 425
[Close]
BLAST of Ca_04866 vs. TrEMBL
Match: B9GQ77_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_642899 PE=3 SV=1)

HSP 1 Score: 527.709 bits (1358), Expect = 5.288e-147
Identity = 266/386 (68.91%), Postives = 313/386 (81.09%), Query Frame = 1 
Query:  736 DSNSNGEPKSNYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIGRQ 1893
            +SN N   + NY+GV+LEE VD   KSGK RLD+WISSRI+GISRARVQSSIK+GLV VNG+++DKVS NV+AGD++ C I+ELQ LRA PENIPLDIVYEDE++LV+NKPAHMVVHPAPGN +GTLVNGILHHC+LP V  S  E LS  ED  D+ +         EGL S    AS+RPGIVHRLDKGTSGLLVVAKDEHSH  LSEQFKL TIKRVY+SLT GVP P+AGR++VP+GRD +NR+RM A+  P    +ARHAASRYKVIEILAGG  ALVEW+LETGRTHQIRAHA+Y+G+PLLGDEVYGGT+NM LSLLR RT PS H +++  +S L+RPCLHA+ LGF HP TG+++HFSC PP DF EILSQLR +G +
Sbjct:   67 NSNQNPGQRINYSGVKLEESVDS--KSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDKVSHNVKAGDKVNCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPTV--SSQEVLSGAEDVSDDDD---------EGLCSSSYAASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVPIGRDVSNRIRMAAIVEPNRG-QARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDEVYGGTQNMALSLLRSRTQPSCHRQLSLSLSGLERPCLHALALGFTHPCTGKEIHFSCPPPPDFTEILSQLREMGTE 438
[Close]
BLAST of Ca_04866 vs. TrEMBL
Match: M1ALN6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009884 PE=3 SV=1)

HSP 1 Score: 524.628 bits (1350), Expect = 4.476e-146
Identity = 260/403 (64.52%), Postives = 322/403 (79.90%), Query Frame = 1 
Query:  706 VARAVSGLADDSNSNGEP------KSNYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTED-SDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIGRQ 1893
            + RA +    DS+S+  P      +SNY+GV+LEE VDG  K+GKLRLD+W+SSRI+G+SRARVQSSI++GLV VNGR+ DKVS  V+ GD++ CTIA+L+ LRA PE+IPLDIV+EDEH+LV+NKPAHMVVHPAPGN +GTLV+GILHHC+LP + F  +E LSD ED SDDELN F+          S +  +S+RPGIVHRLDKGTSGLLVVAK+E+S   L+EQFK  TIKRVY+S+T GVP  VAGRV++P+GRD NNR+RM A+ G   S K+RHA SRYKVIE LA G  ALVEW+LETGRTHQIRAHA+YLG+PL+GDEVYGGTKNM LSLL+P+T P  HG+++++VS++DRPCLHA+TLGF+HP TGE +HF+  PP DF EILS LR I  +
Sbjct:   28 ICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDG--KTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTISFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNENSLASLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKLARGGSALVEWRLETGRTHQIRAHAKYLGIPLMGDEVYGGTKNMALSLLQPKTPPMFHGKLSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSYLRAINTE 428
[Close]
BLAST of Ca_04866 vs. TrEMBL
Match: R0IAL9_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10020321mg PE=3 SV=1)

HSP 1 Score: 502.671 bits (1293), Expect = 1.822e-139
Identity = 255/379 (67.28%), Postives = 306/379 (80.74%), Query Frame = 1 
Query:  757 PKSNYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIGRQ 1893
            P+ N AG+R+EE VD ++K GK+RLD+WISSRING+SRARVQSSI+ GLV VNGR+VDKVS NV+AGDE+ CTI+ELQ L+A  E+IPLDIVYED+H+LV+NKPAHMVVHPAPGN +GTLVNGILHHC+LP+V +S  E     +DSDDE     S +   E   S    AS+RPGIVHRLDKGT+GLLVVAKDEHSH  L+EQFKL TI+RVY+SLT GVP+P  GR+E+P+GRD +NR+RM A+ G L+S +ARHAASRYKVIE LAGG  ALVEW+LETGRTHQIRAHA+Y+GVPLLGDEVYGGTK+M LSLL+ R   S   E+ +++S LDRPCLHA+ LGF HP TG+ V FSC PP D  EI+  LRR GR+
Sbjct:   62 PRVNNAGLRIEETVD-DLK-GKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNVKAGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLPSVAYSSPE----DDDSDDE-----SFSDGEEMTSSSSYAASVRPGIVHRLDKGTTGLLVVAKDEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGLSSGRARHAASRYKVIETLAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVCRSDQDEIIELISRLDRPCLHAIVLGFTHPCTGKIVKFSCPPPPDLAEIVGLLRRSGRE 429
[Close]
BLAST of Ca_04866 vs. TrEMBL
Match: A5AHP5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034413 PE=4 SV=1)

HSP 1 Score: 501.901 bits (1291), Expect = 3.107e-139
Identity = 272/435 (62.53%), Postives = 312/435 (71.72%), Query Frame = 1 
Query:  700 RGVARAVSGLADDSNSNGEP-------KSNYAGVRLEE-IVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDK---------------------------VSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTS--QAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIGRQ 1893
            +  +R    L D SNS  EP       ++NYAGVRLEE +VD    SGKLRLD+WISSRI GISRARVQSSI++GLV VN R+VDK                           VS  +RAGD++ CTI+ELQ LRA PE+IPLDIVYEDEH          VVHPAPGN SGTLVNGILHHC+LP V     ++  D +  DDE N F +     +CE         +IRPGIVHRLDKGTSGLLVVAKDEHSH  LSEQFKL +I RVYISLT+GVPTP++GRVE+PVGRDPNNR+RMTAV GP  S +ARHAASRYKVIEILA G  ALVEW+LETGRTHQIRAHA+YLG+PLLGDEVYGGTKNM LSLLRPR   S HG++ ++VS LDRPCLHA+ LGF HP TG+ VHFSC+PP DF EILS LR+I  +
Sbjct:  157 KSCSRVFRILRDCSNSTDEPLVSVSSRRTNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKAMLVSRKFEVGEGKKIEEKDPITYSEQVSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEH----------VVHPAPGNASGTLVNGILHHCSLPTVALPNRDSEED-DILDDEFNSFAAGQNCGTCE--------TNIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKISTE 572
[Close]
BLAST of Ca_04866 vs. TrEMBL
Match: M4DH18_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra015795 PE=3 SV=1)

HSP 1 Score: 487.649 bits (1254), Expect = 6.064e-135
Identity = 250/398 (62.81%), Postives = 308/398 (77.39%), Query Frame = 1 
Query:  706 VARAVSGLADDSNSNGEPKS---NYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIGR 1890
            ++R V+  +   NS  E  +   N AG++L+E V   +  GK+RLD+WISSR++G+SRARVQSSI+ GLV VNG ++DKVS NV+AGDE+ CTI++LQ LRA PE+IPLDIVYED+H+LV+NKP HMVVHPAPGN +GTLVNGILHHC+LP V    ++   D +DSD+E   F+      EG+        IRPGIVHRLDKGTSGLLVVAKDEHSH  L+EQFKL TI+RVYISLT GVP+P  GR++VP+GRD NNR+RM A+ G L+  +ARHAASRYKV+E LAGG  ALVEW+LETGRTHQIRAHA+Y+GVPLLGDEVYGGTK+M LSLL+ R + S   E+ ++VS +DRPCLHA+ LGF+HP TGE + FSC PP D  EI+  LRR GR
Sbjct:   33 LSRFVTATSATPNSTPETTTTRVNNAGLKLDETVS--VSKGKIRLDSWISSRVDGVSRARVQSSIRQGLVSVNGHVIDKVSHNVKAGDEVHCTISKLQPLRAEPEDIPLDIVYEDQHVLVVNKPPHMVVHPAPGNPNGTLVNGILHHCSLPCVATYSNQ--EDDDDSDEE-ETFSDD----EGM--------IRPGIVHRLDKGTSGLLVVAKDEHSHAHLAEQFKLHTIERVYISLTTGVPSPSQGRIDVPIGRDSNNRIRMAAIPGSLSRGRARHAASRYKVVETLAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQRRVSRSDQEEIIELVSRMDRPCLHAIVLGFEHPCTGEIIKFSCPPPPDLAEIVGLLRRSGR 413
[Close]
BLAST of Ca_04866 vs. TrEMBL
Match: B9S051_RICCO (Ribosomal pseudouridine synthase, putative OS=Ricinus communis GN=RCOM_1298450 PE=3 SV=1)

HSP 1 Score: 479.945 bits (1234), Expect = 1.264e-132
Identity = 239/346 (69.08%), Postives = 286/346 (82.66%), Query Frame = 1 
Query:  763 SNYAGVRLEEIVDG-EIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTED-SDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLG 1794
            +NY G+RLEE V     KS KLRLD+WISSRI+GISRARVQSSIK+GLV VNGR+VDKVS NV+ GD++ CTI+ELQ LRA PE++PLDIVYEDEHLLV+NKP HMVVHPAPGN +GTLVNGILHHCNLP V  S  E LSD ED SDD+   ++S   SCE        +SIRPGIVHRLDKGTSGLLVVAKDEH+H  LSEQFK  TI+RVYISLT+GVP+ + GR+++P+GRD NNR+RMTA+ GP+   +ARHAASR+KV+E LAGG  ALVEW+LETGRTHQIRAHA+Y+G+PLLGDEVYGGT++M LSLLRPR   + H E++ ++S+L+RPCLHA+ LG
Sbjct:   51 TNYGGIRLEETVQVVHAKSVKLRLDSWISSRISGISRARVQSSIKSGLVSVNGRVVDKVSHNVKFGDKVTCTISELQPLRAEPEDMPLDIVYEDEHLLVVNKPPHMVVHPAPGNPTGTLVNGILHHCNLPTVAISSQEVLSDAEDRSDDDERSYSS---SCE--------SSIRPGIVHRLDKGTSGLLVVAKDEHAHAHLSEQFKQHTIQRVYISLTSGVPSALTGRIDIPIGRDVNNRIRMTAIPGPIKQGRARHAASRFKVVETLAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDEVYGGTRSMALSLLRPRIPSTCHSELSLLLSKLERPCLHALALG 385
[Close]
BLAST of Ca_04866 vs. DB:Swiss
Match: PUS2_ARATH (RNA pseudouridine synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g76050 PE=2 SV=1)

HSP 1 Score: 500.745 bits (1288), Expect = 2.051e-172
Identity = 249/380 (65.53%), Postives = 302/380 (79.47%), Query Frame = 1 
Query:  757 PKSNYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTED---SDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIG 1887
            P+ N AG+R+EEIVD     GK+RLD+WISSRING+SRARVQSSI+ GLV VNGR+VDKVS NV++GDE+ CTI+ELQ L+A  E+IPLDIVYED+H+LV+NKPAHMVVHPAPGN +GTLVNGILHHC+LP V++S  E   D+++   SDDE     + +PS          AS+RPGIVHRLDKGT+GLLVVAKDEHSH  L+EQFKL TI+RVY+SLT GVP+P  GR+E+P+GRD +NR+RM A+ G +   +ARHAASRYKVIE  AGG  ALVEW+LETGRTHQIRAHA+Y+GVPLLGDEVYGGTK+M LSLL+ R + S   E+ +++S +DRPCLHA+ LGF HP TGE V FSC PP D  EI+  LRR G
Sbjct:   62 PRVNNAGLRIEEIVDA--AKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNVKSGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLPCVDYSNSEEDDDSDEETFSDDE---EMTTSPSSYA-------ASVRPGIVHRLDKGTTGLLVVAKDEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRGGRARHAASRYKVIETFAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVSRSDQEEIIELISRMDRPCLHAIVLGFTHPCTGEIVKFSCPPPSDLAEIVGLLRRSG 429
[Close]
BLAST of Ca_04866 vs. DB:Swiss
Match: PUS2_ORYSJ (RNA pseudouridine synthase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0717400 PE=2 SV=1)

HSP 1 Score: 457.218 bits (1175), Expect = 3.943e-155
Identity = 230/380 (60.53%), Postives = 281/380 (73.95%), Query Frame = 1 
Query:  760 KSNYAGVRLEEIVDGEIKSGKLRLDTWISSRING--ISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSD---TEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 1884
            +  + G RLEE V      G+ R+D WIS+R+ G  +SRAR+Q+SI+AGLV VNGR V KVS  V+ GD + CT+ ELQ LRA PE+IPLDIVYED+HLLV+NKPAHMVVHPAPGN +GTLVN ILHHC +         ++ D       DD       Q  + E + S +  A +RPGIVHRLDKGTSGLLVVAKDEHSH +L+EQFKL TI+RVYISLT G P P +GR+EVP+ RDPNNR+RM A  G      ARHAASRYKV E+ AGG  ALVEW+LETGRTHQIRAHA+YLG+PLLGDE YGGTK+M LSLLRPRT    H +++ M+S++DRPCLHA  LGF+HPH+G+ + FSC PP DF E+L++L ++
Sbjct:   53 RGGHGGTRLEEAVPA--GEGRSRIDAWISARLGGGGVSRARIQASIRAGLVVVNGRPVSKVSHMVKGGDIVSCTVLELQPLRAEPEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNAILHHCKISTFTCLARNSIDDECPDSSDDDIDVFDIDQFTTGE-VSSEVREALVRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNNRIRMIATPGS-GHRYARHAASRYKVREVFAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDETYGGTKSMALSLLRPRTPSRYHCDLSNMISKIDRPCLHAALLGFKHPHSGKILEFSCPPPDDFTEVLNELHQV 428
[Close]
BLAST of Ca_04866 vs. DB:Swiss
Match: YLYB_BACSU (Uncharacterized RNA pseudouridine synthase YlyB OS=Bacillus subtilis (strain 168) OX=224308 GN=ylyB PE=3 SV=3)

HSP 1 Score: 219.164 bits (557), Expect = 5.617e-65
Identity = 131/354 (37.01%), Postives = 186/354 (52.54%), Query Frame = 1 
Query:  826 RLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIG 1887
            R+D +++S  N  SR +VQ  +K G V VNG  V K ++ ++ GD++  T+ E + L  + E + LDI YED+ +LV+NKP  MVVHPAPG+ +GTLVNG++ HC                     +L+G                   +RPGIVHR+DK TSGLL+VAK++ +H  L  Q   +T+ R Y ++  G+ +   G ++ P+GRD  +R  MT       +   ++A + + V+E        LVE +LETGRTHQIR H +Y+G PL GD  YG           PR T   +G+            LHA  LGF HP TGE V F    P D  E++  LR+ G
Sbjct:   16 RIDKFLASTENDWSRTQVQQWVKDGQVVVNGSAV-KANYKIQPGDQVTVTVPEPEALDVLAEPMDLDIYYEDQDVLVVNKPRGMVVHPAPGHLTGTLVNGLMAHCT--------------------DLSGIN---------------GVMRPGIVHRIDKDTSGLLMVAKNDMAHESLVNQLVNKTVTRKYTAVVHGLISHDDGTIDAPIGRDKKDRQSMTV------TRDGKNAVTHFHVLERFQ--DFTLVECQLETGRTHQIRVHMKYIGFPLAGDPKYG-----------PRKTIDFNGQ-----------ALHAGVLGFDHPRTGEYVEFEAPLPEDMAELIENLRKNG 303
[Close]
BLAST of Ca_04866 vs. DB:Swiss
Match: Y723_CHLP8 (Uncharacterized RNA pseudouridine synthase Cpar_0723 OS=Chlorobaculum parvum (strain NCIB 8327) OX=517417 GN=Cpar_0723 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.353e-64
Identity = 134/356 (37.64%), Postives = 197/356 (55.34%), Query Frame = 1 
Query:  823 LRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGE-MTKMVSEL-DRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 1884
            +R+D +++ ++  ++R +VQ++I+ G V VNG+ V K ++ V++ D I  T          PE+IP+ I+YED+ L+VI+K A MVVHPA GN +GTL N ILHH                 +D+D+                  L    +RPGIVHRLDK TSGL+++AK+  +  KL+ QF  R +++VY ++  GVP   +G ++  +GR   NR  M     P    + +HA + Y+V+E L  G  +L++  L TGRTHQIR H ++LG  +LGDE YGG          PRT P    E  T+ + EL  R  LHA TL F+ P TGE + FS   P D   +L ++R +
Sbjct:   12 MRIDRYLTQQVENMTRNKVQAAIEEGRVLVNGKPV-KSNYRVKSCDHIHLTFLRPPAPELAPEDIPITILYEDDDLMVIDKEAGMVVHPAFGNWTGTLANAILHHLG---------------KDADE------------------LDKTEMRPGIVHRLDKDTSGLIIIAKNPTALHKLARQFANRQVEKVYKAIVWGVPKAESGTIKTNIGRSHKNRKVMANF--PYEGAEGKHAITDYQVVEDL--GYFSLMDVTLHTGRTHQIRVHLQHLGHSILGDETYGGAT--------PRTLPFSKSEPFTRNLLELMSRQALHAQTLRFRQPTTGEPLSFSAPLPEDMELVLEKIRTV 321
[Close]
BLAST of Ca_04866 vs. DB:Swiss
Match: Y901_CHLAA (Uncharacterized RNA pseudouridine synthase Caur_0901 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) OX=324602 GN=Caur_0901 PE=3 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.169e-58
Identity = 131/351 (37.32%), Postives = 182/351 (51.85%), Query Frame = 1 
Query:  826 RLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLR 1878
            R+D +++  +  +SRA+VQ  I+ G V  +GR   + S  VR G  I+ TI        V E IPLD+VYED  + VINKPA MVVHPAPG+  GTLVN +L     P++    +                                  +RPGIVHRLD+ TSGLLV+A+ + +   L +Q + R ++++Y +L  G P P  G ++ P+GRDP +RLRM  V         R A + Y++++    G  +L+E +LETGRTHQIR H R+LG P++GD VYG           PR +  LH         L R  LHA  LG  HP +G    F+   P D   +L QL+
Sbjct:   27 RIDRFLAGAMPDLSRAQVQRLIEQGFVLYDGR-SPRASQPVRPGAVIQLTIPPPIPTELVAEPIPLDVVYEDADIAVINKPAGMVVHPAPGHPRGTLVNALL--ARYPDLAIGGE----------------------------------LRPGIVHRLDRDTSGLLVIARHDQAMRSLVDQQQARRMRKIYQALVIGRP-PETGTIDAPIGRDPRDRLRMAVVP------DGRPARTHYRLLDTF--GDYSLLEVQLETGRTHQIRVHLRHLGYPIVGDPVYG-----------PRRS-HLH---------LSRQFLHAAYLGLVHPRSGRWQEFTAPLPADLQIVLRQLQ 310
[Close]
BLAST of Ca_04866 vs. DB:Swiss
Match: Y1629_SYNY3 (Uncharacterized RNA pseudouridine synthase slr1629 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1629 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.343e-57
Identity = 124/353 (35.13%), Postives = 181/353 (51.27%), Query Frame = 1 
Query:  823 LRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRR 1881
            +RLD W++ ++  +SR+R Q  I++G V  NG +    +  ++ GD +   I EL  L  V +NIPLDI+YEDE L++INKPA +VVHP PG+  GT+VN +L HC                              P   G+         RPGIVHRLDK T+G +VVAK E +   L  Q K +T +R+Y  +  G P  + G V +PVGR P +R +M  V         R A + ++++E +  G+ + +E++LETGRTHQIR H++ +G PL+GD +Y              T+P        +   L    LHA  L   HP +GE +      P  F ++L  LR+
Sbjct:   32 VRLDKWLAEQLPELSRSRCQKLIESGQVQRNGLVCQDKNLILKTGDRLVVNIPELIPLDVVAQNIPLDILYEDEQLIIINKPAGLVVHPGPGHPDGTVVNALLAHC------------------------------PDLAGIG-----GVQRPGIVHRLDKDTTGAMVVAKTELALHNLQVQLKEKTARRLYWGIVYGSPKEIQGTVNLPVGRHPGDRQKMGIVP---VEKGGREAVTHWRLLERI--GNHSWLEFQLETGRTHQIRVHSKQMGHPLVGDNLY--------------TSPG------SVNVNLPGQALHAHQLSLIHPVSGEIITAIAPMPAHFEKLLVYLRQ 324
[Close]
BLAST of Ca_04866 vs. DB:Swiss
Match: RLUD_ZYMMO (Ribosomal large subunit pseudouridine synthase D OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=rluD PE=3 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.583e-57
Identity = 134/351 (38.18%), Postives = 184/351 (52.42%), Query Frame = 1 
Query:  826 RLDTWISSRINGISRARVQSSIKAGLV-HVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQL 1875
            RLD  ++S I  +SR R+++ I +G V +  G LV   +F +++ D     I   +     P++IPL+IV+EDEHLLV+NKPA MVVHPA GN   TLVN +L+HC                     +L+G    A               RPGIVHR+DK TSGLLVVAK + +H  L+ QF   +I R Y ++  G P+ + G V+ P+ R   NR +M  V    +  + + A + Y++I  L   S  L+E +LETGRTHQ+R H   +G  LLGD VYG +K    +LL+     SL            R  LHA  LGF HP +G+QV F  E P D   +   L
Sbjct:   16 RLDRALASLITRLSRERLKNLISSGCVSNSQGALVRDPAFKIKSLDCFTVDIPLPRPAHNEPQDIPLEIVFEDEHLLVVNKPAGMVVHPAAGNYDNTLVNALLYHCA-------------------GKLSGIGGVA---------------RPGIVHRIDKDTSGLLVVAKTDPAHAGLAAQFADHSINRRYRAIVDGHPS-LQGHVDAPLARSSVNRQKMAIV----SDGRGKRAVTHYRMITPLKNAS--LIECRLETGRTHQVRVHMSSIGHSLLGDPVYGRSKKAHHALLQ-----SL---------AFQRQALHAAHLGFIHPISGKQVDFDAEMPQDMQLLFKML 311
[Close]
BLAST of Ca_04866 vs. DB:Swiss
Match: Y1758_AQUAE (Uncharacterized RNA pseudouridine synthase aq_1758 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1758 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.386e-56
Identity = 122/366 (33.33%), Postives = 187/366 (51.09%), Query Frame = 1 
Query:  778 VRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQL 1875
            +++ E+++ +++  + RLD +++      SR+ ++  +K GLV+VNG  V K S  +R G+ +   + E + L   PENIP++I+YEDE + V+ KP  +VVHP+PG TSGTLVN +L+H         KD +                   S  G++        RPGIVHRLDK T+G++V+AK+  +H  L  QF+ R  ++ Y  L  G+     G ++ P+ R P +R R           + + A + Y V++        L++ K+ TGRTHQIR H   +G P+LGD  YG   + V     P+   SL GE   ++         A  LGF HP  GE + F  E P  F  + S L
Sbjct:    1 MKISEVLEFKVEGEEERLDKFLARAYPDFSRSYIKKLVKEGLVYVNGEEVRKPSRKLREGERVILHVPEPEPLDVKPENIPINIIYEDEDIAVVEKPCGLVVHPSPGYTSGTLVNALLYHI--------KDLS-------------------SIGGVE--------RPGIVHRLDKETAGVMVIAKNNTAHRNLVRQFQERKTEKFYKVLVKGLVKKDYGAIDTPIARHPVDRKRF------WVRKEGKEALTEYWVLKRYEKYEITLLKVKIHTGRTHQIRVHFASIGHPVLGDRTYGFKSSSV-----PKELLSLMGECNMLI---------AYHLGFYHPTKGEWMVFEIEEPETFKSVYSWL 311
[Close]
BLAST of Ca_04866 vs. DB:Swiss
Match: RLUD_RALSO (Ribosomal large subunit pseudouridine synthase D OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=rluD PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.293e-55
Identity = 137/369 (37.13%), Postives = 187/369 (50.68%), Query Frame = 1 
Query:  778 VRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRA-VPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEI--LAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQL 1875
            V + E + GE      RLD  ++  +   SR+R+Q  I AG V V G  V +    V  GD I+          A V E + LD+VYED+ LLVINKPA +VVHPA GN SGT++NG+LH                              + P   GL         R GIVHRLDK TSGL+VVA+   +   L  Q + RT+KR Y++L  G  TP AG ++ P+GRDP +R RM  +     +   + A + +K +++  L     +LV+ +LETGRTHQIR H    G PLLGD VY  T+N      RP+T  +       + +   R  LHA+ LG  HP +G+ VH+    P D  E++  L
Sbjct:   41 VEIPEALHGE------RLDKALAKLLPDYSRSRLQQWIDAGAVRVGGAAV-RPRAAVCGGDRIEVVPQRADDENAFVAEPVDLDVVYEDDTLLVINKPAGLVVHPAAGNWSGTVLNGLLH------------------------------RYPQAAGLP--------RAGIVHRLDKETSGLMVVARTLPAQTDLVRQLQARTVKRTYLALVWG-ETPEAGTIDAPIGRDPRDRTRMAII----ETASGKPARTHFKTLDVVDLGRAQVSLVQCQLETGRTHQIRVHFESEGHPLLGDPVY--TRNFRRG--RPQTIKA------PLPAPFARQALHAVRLGLVHPASGQSVHWHAGVPDDLAELMDAL 349
[Close]
BLAST of Ca_04866 vs. DB:Swiss
Match: RLUD_PASMU (Ribosomal large subunit pseudouridine synthase D OS=Pasteurella multocida (strain Pm70) OX=272843 GN=rluD PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.965e-53
Identity = 123/364 (33.79%), Postives = 182/364 (50.00%), Query Frame = 1 
Query:  796 VDGEIKSGKL--RLDTWISSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASI-RPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLR 1878
            +  EI+  +L  RLD  ++      SR+R+++ I+  LVHVNG +V+     V  G++I+  +      R  PEN+PL+IVYED+ +LVINKP   VVHP  GN SGT++N +L+H                                         +IA + R GIVHRLDK T+GL+V+AK   +  KL    + R I R Y ++  G+ T   G V+ P+ R P  R  M     P+     + A + Y+++E     +   +  +LETGRTHQIR H  ++  PLLGD+ YGG         RPR   +   E+ + + +  R  LHA+ L   HP TGE + +    P DF E++  L+
Sbjct:    6 LSAEIQLSQLGQRLDQALAELFPDYSRSRLKTWIEQNLVHVNGDVVNVPRAKVYGGEQIEIVVEIDDDTRFEPENLPLNIVYEDDDILVINKPKDFVVHPGAGNASGTVLNALLYHYP---------------------------------------AIAEVPRAGIVHRLDKDTTGLMVIAKTIPAQTKLVRDLQKRKITREYEAIACGIMTK-GGMVDQPMARHPTKRTHMAV--HPM----GKPAVTHYRIMERFR--NYTRLRLRLETGRTHQIRVHMAHIAHPLLGDQTYGG---------RPRPPKNASEELMQTLRDFKRQALHAIMLRLAHPITGELMEWHAPLPTDFVELVEALK 312
The following BLAST results are available for this feature:
BLAST of Ca_04866 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
PUS2_ARATH9.224e-13965.53RNA pseudouridine synthase 2, chloroplastic OS=Ara... [more]
PUS2_ORYSJ5.993e-13059.80RNA pseudouridine synthase 2, chloroplastic OS=Ory... [more]
Y723_CHLP81.411e-5437.64Uncharacterized RNA pseudouridine synthase Cpar_07... [more]
YLYB_BACSU1.842e-5436.72Uncharacterized RNA pseudouridine synthase YlyB OS... [more]
Y1629_SYNY32.331e-4935.13Uncharacterized RNA pseudouridine synthase slr1629... [more]
Y901_CHLAA3.976e-4937.32Uncharacterized RNA pseudouridine synthase Caur_09... [more]
RLUD_ZYMMO5.192e-4937.61Ribosomal large subunit pseudouridine synthase D O... [more]
Y1758_AQUAE5.741e-4832.79Uncharacterized RNA pseudouridine synthase aq_1758... [more]
RLUD_RALSO7.498e-4837.13Ribosomal large subunit pseudouridine synthase D O... [more]
RLUD_NEIMA1.083e-4636.43Ribosomal large subunit pseudouridine synthase D O... [more]

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BLAST of Ca_04866 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7J5V2_MEDTR0.000e+083.03RNA pseudourine synthase OS=Medicago truncatula GN... [more]
I1JSZ4_SOYBN0.000e+081.50Uncharacterized protein OS=Glycine max PE=3 SV=1[more]
E0CQW6_VITVI2.075e-15170.38Putative uncharacterized protein OS=Vitis vinifera... [more]
K4BVS1_SOLLC2.374e-14765.75Uncharacterized protein OS=Solanum lycopersicum GN... [more]
B9GQ77_POPTR5.288e-14768.91Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
M1ALN6_SOLTU4.476e-14664.52Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
R0IAL9_9BRAS1.822e-13967.28Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
A5AHP5_VITVI3.107e-13962.53Putative uncharacterized protein OS=Vitis vinifera... [more]
M4DH18_BRARP6.064e-13562.81Uncharacterized protein OS=Brassica rapa subsp. pe... [more]
B9S051_RICCO1.264e-13269.08Ribosomal pseudouridine synthase, putative OS=Rici... [more]

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BLAST of Ca_04866 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PUS2_ARATH2.051e-17265.53RNA pseudouridine synthase 2, chloroplastic OS=Ara... [more]
PUS2_ORYSJ3.943e-15560.53RNA pseudouridine synthase 2, chloroplastic OS=Ory... [more]
YLYB_BACSU5.617e-6537.01Uncharacterized RNA pseudouridine synthase YlyB OS... [more]
Y723_CHLP82.353e-6437.64Uncharacterized RNA pseudouridine synthase Cpar_07... [more]
Y901_CHLAA1.169e-5837.32Uncharacterized RNA pseudouridine synthase Caur_09... [more]
Y1629_SYNY31.343e-5735.13Uncharacterized RNA pseudouridine synthase slr1629... [more]
RLUD_ZYMMO1.583e-5738.18Ribosomal large subunit pseudouridine synthase D O... [more]
Y1758_AQUAE4.386e-5633.33Uncharacterized RNA pseudouridine synthase aq_1758... [more]
RLUD_RALSO2.293e-5537.13Ribosomal large subunit pseudouridine synthase D O... [more]
RLUD_PASMU6.965e-5333.79Ribosomal large subunit pseudouridine synthase D O... [more]
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Expression

Available Analyses

Select an Expression Analysis

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Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainGENE3D3.10.290.10no descriptioncoord: 272..360
score: 9.3
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 276..322
score: 2.6
IPR002942RNA-binding S4 domainSMARTSM00363S4 RNA-binding domaincoord: 275..340
score: 1.3
IPR002942RNA-binding S4 domainPROFILEPS50889S4coord: 275..348
score: 12
IPR006145Pseudouridine synthase, RsuA and RluB/C/D/E/FPFAMPF00849PseudoU_synth_2coord: 349..544
score: 1.4
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 430..444
score
IPR012336Thioredoxin-like foldGENE3D3.40.30.10no descriptioncoord: 103..208
score: 1.5
IPR012336Thioredoxin-like foldPROFILEPS51352THIOREDOXIN_2coord: 83..271
score: 9
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 82..208
score: 1.3
IPR020103Pseudouridine synthase, catalytic domainSUPERFAMILY55120Pseudouridine synthasecoord: 341..626
score: 4.3
NoneNo IPR availableCOILcoilcoiled-coilcoord: 68..89
score
NoneNo IPR availablePANTHERPTHR10436RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEINcoord: 155..627
score: 3.2e
NoneNo IPR availablePANTHERPTHR10436:SF39PSEUDOURIDINE SYNTHASEcoord: 155..627
score: 3.2e
NoneNo IPR availablePFAMPF13905Thioredoxin_8coord: 112..208
score: 5.5
NoneNo IPR availableSEGsegsegcoord: 220..233
score
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 276..374
score: 1.8
NoneNo IPR availableSEGsegsegcoord: 47..64
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_04866_v1.0_kabuli ID=Ca_04866_v1.0_kabuli; Name=Ca_04866; organism=Cicer arietinum; type=mRNA; length=1896bp
ATGCCGTGGCTTGCAATTCCATTCTATGATTTGGAAACAAAAAAATCATT
GAATAGAAAATATGAAGTGGAAGGTATTCCATGTTTAATTATGTTGCAAC
CTAGTAAAGTGGATGATGCAACAACACTTCGTCATGGTGTTGAACTTATT
TATCGATATGGTGTTCAAGCTTATCCATTTAGTAATGAGAGATTGATGGA
ATTGCACGAGGCAGAGAGAGAGAAGCGTGAAAATCAAACACTTATTAATT
TACTTGCTAACAATTTTAGAGACTATGTTTTGAGTCAAACTCACACGGGA
CTATTCACACAGGTACCTATTGCTTCTTTAGTGGGTAAGACAATTGGACT
ATACTTCTCAGCCGGGTGGTGCGTACCATGCACAAAATTCACCCCAAAAT
TGATTTCCGTTTATGAAAAGATCAAACAAGAGCTAACTGAAAAAGGAGAT
AATGAAGACTTTGAAATTGTGCTAGTTTCCAACGACCGTGACCAAGAATC
TTTTGACTCTTACTACAATACTATGCCTTGGTTAGCATTGCCTTTTGGAG
ACCCAGAAATAAAGAACCTTGCAAGACACTTTGATATACAAGGGATTCCT
TGTTTGGTAATTATAGGTCCTGATGCAACAAGAGCATTCCAATCTCAGTT
TCGAACTTCACCTTCTTCACTGTTTTTCTTCTCTCCCACTAAGTTTCCAC
GTGGCGTTGCGAGAGCCGTTTCTGGTTTGGCCGATGATTCGAACTCGAAC
GGAGAGCCAAAATCGAATTACGCAGGCGTGCGGTTGGAAGAGATCGTGGA
CGGTGAAATCAAATCTGGGAAACTGAGACTAGACACTTGGATCTCTTCTC
GCATCAATGGCATCAGTAGGGCTCGTGTTCAATCAAGTATTAAAGCCGGA
CTCGTTCATGTCAATGGCCGTCTCGTTGATAAGGTTTCTTTCAATGTCAG
AGCTGGGGATGAAATCAAGTGCACAATTGCAGAGTTGCAAAAGTTGAGAG
CTGTGCCGGAAAACATACCTTTGGATATAGTTTATGAAGATGAGCATTTG
CTAGTCATAAATAAACCTGCACACATGGTTGTGCATCCAGCACCTGGCAA
TACATCTGGGACACTCGTCAATGGCATTCTTCACCATTGCAACCTGCCAA
ATGTTGAATTTTCTAAAGACGAAGCTCTTTCAGATACAGAAGATTCGGAT
GATGAACTTAATGGCTTCACGTCCCAGGCACCTTCTTGTGAAGGGTTAGA
TTCTAGATTGTCTATAGCATCAATTCGCCCAGGAATTGTACACAGATTAG
ACAAAGGCACGAGTGGGTTACTAGTTGTTGCAAAGGATGAACATTCTCAT
ATGAAATTGTCTGAACAATTCAAGCTGCGCACTATCAAGAGGGTCTATAT
TAGTCTCACTGCCGGGGTACCTACTCCAGTTGCTGGGCGTGTTGAGGTTC
CGGTTGGTCGTGATCCTAATAACCGGCTTCGTATGACTGCTGTAGCTGGA
CCACTTACCTCTATGAAGGCCCGTCATGCTGCTAGTAGGTATAAAGTAAT
TGAGATACTTGCTGGGGGTAGCTGTGCATTGGTTGAGTGGAAGTTGGAAA
CCGGACGCACTCATCAGATCCGTGCACATGCCAGGTATTTGGGTGTACCT
CTGCTTGGTGATGAGGTATATGGAGGGACGAAAAACATGGTCTTGTCACT
GCTAAGGCCGCGAACAACTCCGAGTTTGCATGGGGAAATGACTAAAATGG
TTTCTGAGCTAGATAGGCCTTGCCTTCATGCTATGACTCTCGGGTTTCAG
CATCCTCATACAGGGGAGCAGGTGCACTTTTCATGCGAACCCCCTGTAGA
TTTTAATGAGATTTTGAGCCAGCTTCGTAGAATTGGCAGGCAGTGA
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protein sequence of Ca_04866_v1.0_kabuli

>Ca_04866_v1.0_kabuli ID=Ca_04866_v1.0_kabuli; Name=Ca_04866_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=631bp
MPWLAIPFYDLETKKSLNRKYEVEGIPCLIMLQPSKVDDATTLRHGVELI
YRYGVQAYPFSNERLMELHEAEREKRENQTLINLLANNFRDYVLSQTHTG
LFTQVPIASLVGKTIGLYFSAGWCVPCTKFTPKLISVYEKIKQELTEKGD
NEDFEIVLVSNDRDQESFDSYYNTMPWLALPFGDPEIKNLARHFDIQGIP
CLVIIGPDATRAFQSQFRTSPSSLFFFSPTKFPRGVARAVSGLADDSNSN
GEPKSNYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAG
LVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHL
LVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSD
DELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSH
MKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAG
PLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVP
LLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQ
HPHTGEQVHFSCEPPVDFNEILSQLRRIGRQ
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mRNA from alignment at Ca5:31649247..31655811-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_04866_v1.0_kabuli ID=Ca_04866_v1.0_kabuli; Name=Ca_04866; organism=Cicer arietinum; type=mRNA; length=6565bp; location=Sequence derived from: Ca5:31649247..31655811- (Cicer arietinum
ATGCCGTGGCTTGCAATTCCATTCTATGATTTGGAAACAAAAAAATCATT
GAATAGAAAATATGAAGTGGAAGGTATTCCATGTTTAATTATGTTGCAAC
CTAGTAAAGTGGATGATGCAACAACACTTCGTCATGGTGTTGAACTTATT
TATCGATATGGTGTTCAAGCTTATCCATTTAGTAATGAGAGATTGATGGA
ATTGCACGAGGCAGAGAGAGAGAAGCGTGAAAATCAAACACTTATTAATT
TACTTGCTAACAATTTTAGAGACTATGTTTTGAGTCAAACTCACACGGGA
CTATTCACACAGGTAATTAATATTTTGCATGCTACTGTTTTCTTCCACTA
TTATTATTATTTGAAAATAGATATTATTAATTTTTGGTTTGATTGGTCGT
GTACAGGTACCTATTGCTTCTTTAGTGGGTAAGACAATTGGACTATACTT
CTCAGCCGGGTGGTGCGTACCATGCACAAAATTCACCCCAAAATTGATTT
CCGTTTATGAAAAGATCAAACAAGAGCTAACTGAAAAAGGAGATAATGAA
GACTTTGAAATTGTGCTAGTTTCCAACGACCGTGACCAAGAATCTTTTGA
CTCTTACTACAATACTATGCCTTGGTTAGCATTGCCTTTTGGAGACCCAG
AAATAAAGAACCTTGCAAGACACTTTGATATACAAGGGATTCCTTGTTTG
GTAATTATAGGTCCTGATGGTAAAACAATAACAATACATGGAAGAAATTT
AATAAACTTGTATCAAGAAAATGCTTACCCTTTCACTAAGGCCAAAGTTG
AGCAACTAGAGAAACAACTTGAAGAAGAGGCTAGAGACCTTCCAATTTTG
GTGCATCATGTAGGACACCATCATGGATTGAATTTAGTGTCGGATGGAAA
TGGGGGAGGACCCTTTATTTGTTGTGTGTGTGATGAGCAAGGCTCTAATT
GGGCCTACCAATGTCTTCAATGTGGCTATGAAGTGCATCCAAAATGCATC
AAAACCGTGCATGTGCATGTGCATGGACCGTGACAACCCACGACCCCTTA
TTGGGTTGAGATCCTCTTTACTCATCCAAAAATTTCAATAAAATAAAATA
TTATTTTGTTTCATCAATCTTTCTATCTCCTATTGAAATTTTTTTTAGAG
AAGATCTCAACTCCTCTAAAGGCTACTAATACGAAGTTGATTGTAAGAAT
CAATTTTCTAGGATCACCAATTAATTGTGTGTGTTGATGTGTCTTGCATG
TGCAACAATGTTTGATTAGGTGGTTGGTTACATATAATCCTAATCTAGAC
AACGCGTTGGAATTCCCTTCATATGCAATTTGGATATCTTTATTTATTTT
ATATTAGATTGTTTTCTATTAATCAGAAACGTGTGACAAATTTAAGAGAA
TTTGGAGACTAAGAAATTACATGCGAGCTCTCCAACTTTTCGATTCTAAT
AAATGGAAATTTAGTGAACATAGGAAAGGAAATAACGTTAATTTTTTCAA
AAATATTATTTTGATATCAATTTTATTTAAAGAATCTAATGCCAAAATTC
ATATACATTAAATATCGAAAAATAGAGTATTTACATATTATATATATGTG
CAGCTACATATAAAACGGTACCTACGAGAAAATTTTAGCATCAAATATTT
TTAATTACAGTTAATTTGCCAAATTTTATATGCTAAATAGACGCAATAGA
GTTTTTATGTATTTGATTTGATAGAAAAAGAAGAAACATTTGAATTGAAA
TGATATCACTTAATAACTCATGTGGATGTTGTGGTGTTTCCACAGCAACA
AGAGCATTCCAATCTCAGTTTCGAACTTCACCTTCTTCACTGTTTTTCTT
CTCTCCCACTAAGTTTCCACGTGGCGTTGCGAGAGCCGTTTCTGGTTTGG
CCGATGATTCGAACTCGAACGGAGAGCCAAAATCGAATTACGCAGGCGTG
CGGTTGGAAGAGATCGTGGACGGTGAAATCAAATCTGGGAAACTGAGACT
AGACACTTGGATCTCTTCTCGCATCAATGGCATCAGTAGGGCTCGTGTTC
AATCAAGTATTAAAGCCGGACTCGTTCATGTCAATGGCCGTCTCGTTGAT
AAGGTACTCAATTGCGATTCCAAACTCAACTTTTTTTTTTTGTTTTCATG
TTATATATGTTGATTCATGCGAGTAATTTCTTTGCGATTGCTATTTATGC
TGCTCAAATATTGTCCCTCAACTGTTTGATAAAAGTTCGCTTTCAATTTT
CTAGTTATTATTGTTCTGATTTAAGTTTAACATATCCTTTTTCTCTGTCC
CACTGTTAAATACTAAAAGTAATAATAATTTGTTGATGCTTTATGGGTAT
ATTTGATTGGAATCTAAAGTGTGTGTGCGTGCTTGTTGATGCTATTTTTT
GTGGTGGACGCAGCTGTACTTATTACAACTTAGCTTGATTTCCTACCGAG
ACTATCTGAACTCATTCTAGGAAATAGTATGATAGGATCTCTCCTATAAG
AAATGAAGATGAAATAATTTTAATATATGCTCTAGGCTAGAAGAAAGAAG
GTTTGCATGATTTTCGTTTAACCATTAGAGCCTAGCTATAAATCCAGACT
ATTCAATCCGAGAATGTCTCTTGTTTATTTGTGGTCAGTTGGTGAAAATG
AAATGTACTTTGTGTTAAGAATTTAGAACACATTTCCAATATTTAGATGA
GAAAGGGAAACATGGTGCTGTAAAGCTCTCGTCGTGGCTGGGTCTAGGGC
AAACCGTTGTGGGTCTATTGTACAGTCTTATCTTGCATTTGCAAGAGTTT
GGTTCCACATCACGCATCTATGAACTCTAAGTTTCACGATGACAACTCCA
ACCGTTATGGCAACTGCCAAGGCTCCCATTCTCCAATATCTTGACGATGC
TCACAAATTGGAAGTCTTTCGTTGTAGAAATAATCTCTTAGTTGAGACTA
CATCTTTAACGCTGGCCATCTTTGTTGCAATTAGTGACTACGGGAGCTAC
CCCTTAGGACAGTTACGGCTTTAAGACATTGATGGTCGTCAAACATTCCA
AGTATAATGGTGGCTCTCAGTGTTTGCAGGCTAGAGGTTGTGTTGAACTT
GAATGATTTGTGTATTCCTAATTCCACATGACTCGGTGAACTGTGAAACT
TTTGTTTGAAAGTCATTAAATTTTATCATTTGAAATGAACTAGGTCCTTT
AAGGTTTCAATAGTTTCTGGTGTTCCTTTCTTAATTTGTAGTTGAGCAGC
ATGGTGATATATACTTGGGCAGGTTTCTTTCAATGTCAGAGCTGGGGATG
AAATCAAGTGCACAATTGCAGAGTTGCAAAAGTTGAGAGCTGTGCCGGAA
AACATACCTTTGGATATAGTTTATGAAGATGAGCATTTGCTAGTCATAAA
TAAACCTGCACACATGGTAATTCCAAACCTCTTGCTGTTAGATGTTATTG
TTAAATCTTTTGCATGATCCATGTGCATAATTGTAGGGTAGATAGCGCGA
TGCTCTTGTTTTTGGTATATAATTTATTTCTCTTGATTTTTAAACTATCA
GAAGTTCAATACTTGATTATTAAATTCAGGCTGTTTAAACCAACCAACCA
TTTCATTCTATACTGCTAGGCTAGAAGTTATTTTTTAAAATTGATTTCTA
ATCATGTCAGAAATTTTCAGAAGGCAAATGGAAACTAACTCAAAATCAAT
GTTGCCAAATAGCGGCTCTATAGCTTAACGAAATTTGAACAAACATCAAT
TGTTTCAGAATACACAATTTAGCACAAAATGTTGTCAAATAGAGGCCATA
GCGGCGCTATAGCAATGTGGCATAAAGGAATTTGAACAAACCGCTATTTT
CCGCTATCCGTGATTGGTAAGACTACTCAAAATATTGATATTGACTAATG
TCATTACTTGGTCTTCAACCTAGGTTGTGCATCCAGCACCTGGCAATACA
TCTGGGACACTCGTCAATGGCATTCTTCACCATTGCAACCTGCCAAATGT
TGAATTTTCTAAAGACGAAGCTCTTTCAGATACAGAAGATTCGGATGATG
AACTTAATGGCTTCACGTCCCAGGCACCTTCTTGTGAAGGGTTAGATTCT
AGATTGTCTATAGCATCAATTCGCCCAGGAATTGTACACAGATTAGACAA
AGGCACGAGTGGGTTACTAGTTGTTGCAAAGGTACTTTTTACATTTTCTC
AGATCTTGTTACCAAACTTCAATCAAGAATGAAATTATTCTCACACTTCA
TAAGATTAGCATTCATCTTACACCCAGTATTCTATATGTATGCTTTGCTA
TCAGGATGAACATTCTCATATGAAATTGTCTGAACAATTCAAGCTGCGCA
CTATCAAGAGGGTCTATATTAGTCTCACTGCCGGGGTACCTACTCCAGTT
GCTGGGCGTGTTGAGGTTCCGGTTGGTCGTGATCCTAATAACCGGCTTCG
TATGACTGCTGTAGCTGGACCACTTACCTCTATGAAGGCCCGTCATGCTG
CTAGTAGGTGATTTATGGTACTTTTACCCTAAATGTGTATTTTTCAACAT
TTGTCTATTTGTGTACATAAAAGTGTATTTTTCAACATTTGTCTATTTGT
GTACATGTATTAGATGAACTTCCAGTGTATTATTATTCAATCCGGGTGAC
ATTTCCAAAAATATTTCCAGTGGAATTAGTATGACCCTCTAACTAGCAAT
TATCATGATTCTTGACAAATGCCCACAGGATGTAACCGCGTGACATTTGG
GTTTTTTCATCATATAACCAAATTAATAAGAAACTAAATAAAACAGTTGA
AAATCTCTTGTGCGATCCATTTAACTTTTAACTCGTAGGTCATTAGCTGA
TAAAAACTTCTTAGTTAAAAAAAGTCTATAGTTCTTACTTACTTAAAAGT
CCTTATCAGCTTGGAGATGATCATATAAAGTTAAATCAGATGTTTTAAAA
ACTTATAGTTATTGCAATATTTTTTTAATATTACATTATATTAACATTTT
CGAAGAATGTTTTTTGAGAAGTTTATATCCACTGCTTAATGGCTTTCTAT
TCATCTAATAGTTAATTGCTATCTGCAGGTATAAAGTAATTGAGATACTT
GCTGGGGGTAGCTGTGCATTGGTTGAGTGGAAGTTGGAAACCGGACGCAC
TCATCAGGTATATATCTCTAGAAACTCTAGAGAAATCGTATTTGGCCCCC
ATCTTGTTGTAAGTGATAGAACAGAGGGTGTTGTTTACCGTTGGAGTAAA
ACATGGTCAAAGTTCTATGGTCGGACATGGCATAGATGTATTAACAAAGC
ACAGAGAGCTAGCACTTCGATGCATGCATTTTGCAGATAATAGTATATTC
TTAGTTAGAGAGTTGAGAGAGGAAATGAATGTAAGTTTAGAGATTTGGAG
ACAAGTTTTATAAGAAGTAATTTTGTTTGAATGGAAGTAAAACGAAATAT
ATGAAAAATTTAGCAAAAGAAGAAGAACCTCTAGCTTAGGTAAAAAATGG
AGACTATACCATAAGTTGCACGGTTTAAATATCTTGCAGTAATTGTTCAA
AATGATGGAGAAACATAGGGAGAATCAGAATACATCAAGTGTAAACAGCT
GATTCAAGTGATTGAAATGGAGGAAGGCCTCAATTGTTTCATGTAATGAA
AGGTACATCTCAAGCTAGGGAAATTGTATCGTATAACTATACCAATATTG
TATGGGAATGAGTCGCTGAATGAGTGAAAACACTAGAGGAGATATGATTA
GGACTGTTACTATTAAAAAATTGTTGGGGTCTACTGTATAAAAATTGGCT
GAATCTCGACTCAAGTGCTTCGGTCCTGTGTGGAGGAGACTTGTAAATTC
CTTAGTAAGAAAAGTATATTTGATGATGGACAATTCAATTGCTAAAGGTA
GAGGGAGTCCAAGAAAAATGAAAGTTGAACTTGAAACTATTAAAAAAGAT
TTAAGAGGCTAATTATTTGGTTATAGACATGATTTATAATAGAATATTAT
AAAGTCGTTTGATCATGTTGTCAATCCCACTTAGAGAGATAAGATTTGGT
TGCAGTTATTTTTAGAATTTAGTTATAAATATTTAGAAAAAAAAAATGAA
ATGTAATTGTTTTAAAGAATATTCCACAATAATATGCTAAACTTATAATT
ACCTTCTAAAATATACACTTGTTTTGTAGATCCGTGCACATGCCAGGTAT
TTGGGTGTACCTCTGCTTGGTGATGAGGTATATGGAGGGACGAAAAACAT
GGTCTTGTCACTGCTAAGGCCGCGAACAACTCCGAGTTTGCATGGGGAAA
TGACTAAAATGGTTTCTGAGCTAGATAGGCCTTGCCTTCATGCTATGACT
CTCGGGTAACATGATAAAATATTTTTAACTTCCTAGCTAAACTTTGGTTC
TCATTTTATTTGCATAATTCATTAAACTTGAGAGCACCATTGGTTTTGCT
CATTGTATGTAGGTTTCAGCATCCTCATACAGGGGAGCAGGTGCACTTTT
CATGCGAACCCCCTGTAGATTTTAATGAGATTTTGAGCCAGCTTCGTAGA
ATTGGCAGGCAGTGA
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Coding sequence (CDS) from alignment at Ca5:31649247..31655811-

>Ca_04866_v1.0_kabuli ID=Ca_04866_v1.0_kabuli; Name=Ca_04866; organism=Cicer arietinum; type=CDS; length=1896bp; location=Sequence derived from: Ca5:31649247..31655811- (Cicer arietinum
ATGCCGTGGCTTGCAATTCCATTCTATGATTTGGAAACAAAAAAATCATT
GAATAGAAAATATGAAGTGGAAGGTATTCCATGTTTAATTATGTTGCAAC
CTAGTAAAGTGGATGATGCAACAACACTTCGTCATGGTGTTGAACTTATT
TATCGATATGGTGTTCAAGCTTATCCATTTAGTAATGAGAGATTGATGGA
ATTGCACGAGGCAGAGAGAGAGAAGCGTGAAAATCAAACACTTATTAATT
TACTTGCTAACAATTTTAGAGACTATGTTTTGAGTCAAACTCACACGGGA
CTATTCACACAGGTACCTATTGCTTCTTTAGTGGGTAAGACAATTGGACT
ATACTTCTCAGCCGGGTGGTGCGTACCATGCACAAAATTCACCCCAAAAT
TGATTTCCGTTTATGAAAAGATCAAACAAGAGCTAACTGAAAAAGGAGAT
AATGAAGACTTTGAAATTGTGCTAGTTTCCAACGACCGTGACCAAGAATC
TTTTGACTCTTACTACAATACTATGCCTTGGTTAGCATTGCCTTTTGGAG
ACCCAGAAATAAAGAACCTTGCAAGACACTTTGATATACAAGGGATTCCT
TGTTTGGTAATTATAGGTCCTGATGCAACAAGAGCATTCCAATCTCAGTT
TCGAACTTCACCTTCTTCACTGTTTTTCTTCTCTCCCACTAAGTTTCCAC
GTGGCGTTGCGAGAGCCGTTTCTGGTTTGGCCGATGATTCGAACTCGAAC
GGAGAGCCAAAATCGAATTACGCAGGCGTGCGGTTGGAAGAGATCGTGGA
CGGTGAAATCAAATCTGGGAAACTGAGACTAGACACTTGGATCTCTTCTC
GCATCAATGGCATCAGTAGGGCTCGTGTTCAATCAAGTATTAAAGCCGGA
CTCGTTCATGTCAATGGCCGTCTCGTTGATAAGGTTTCTTTCAATGTCAG
AGCTGGGGATGAAATCAAGTGCACAATTGCAGAGTTGCAAAAGTTGAGAG
CTGTGCCGGAAAACATACCTTTGGATATAGTTTATGAAGATGAGCATTTG
CTAGTCATAAATAAACCTGCACACATGGTTGTGCATCCAGCACCTGGCAA
TACATCTGGGACACTCGTCAATGGCATTCTTCACCATTGCAACCTGCCAA
ATGTTGAATTTTCTAAAGACGAAGCTCTTTCAGATACAGAAGATTCGGAT
GATGAACTTAATGGCTTCACGTCCCAGGCACCTTCTTGTGAAGGGTTAGA
TTCTAGATTGTCTATAGCATCAATTCGCCCAGGAATTGTACACAGATTAG
ACAAAGGCACGAGTGGGTTACTAGTTGTTGCAAAGGATGAACATTCTCAT
ATGAAATTGTCTGAACAATTCAAGCTGCGCACTATCAAGAGGGTCTATAT
TAGTCTCACTGCCGGGGTACCTACTCCAGTTGCTGGGCGTGTTGAGGTTC
CGGTTGGTCGTGATCCTAATAACCGGCTTCGTATGACTGCTGTAGCTGGA
CCACTTACCTCTATGAAGGCCCGTCATGCTGCTAGTAGGTATAAAGTAAT
TGAGATACTTGCTGGGGGTAGCTGTGCATTGGTTGAGTGGAAGTTGGAAA
CCGGACGCACTCATCAGATCCGTGCACATGCCAGGTATTTGGGTGTACCT
CTGCTTGGTGATGAGGTATATGGAGGGACGAAAAACATGGTCTTGTCACT
GCTAAGGCCGCGAACAACTCCGAGTTTGCATGGGGAAATGACTAAAATGG
TTTCTGAGCTAGATAGGCCTTGCCTTCATGCTATGACTCTCGGGTTTCAG
CATCCTCATACAGGGGAGCAGGTGCACTTTTCATGCGAACCCCCTGTAGA
TTTTAATGAGATTTTGAGCCAGCTTCGTAGAATTGGCAGGCAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR006145PsdUridine_synth_RsuA/RluA
IPR006224PsdUridine_synth_RluC/D_CS
IPR012336Thioredoxin-like_fold
IPR020103PsdUridine_synth_cat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K15452PUS2; tRNA pseudouridine synthase 2 [EC:5.4.99.-]