Ca_04871, Ca_04871_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_04871 vs. SwissProt
Match: LAR1B_HUMAN (La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 3.531e-15 Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 1051 FPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRW 1314
+PV E L I Q++YYFS NL +D FLR MDE G++ ISLIA F RV+ LT N+ LILE+L+ S VE+ +K+R++ E +W
Sbjct: 208 YPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKW 295
BLAST of Ca_04871 vs. SwissProt
Match: LARP1_HUMAN (La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.640e-12 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 1051 FPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRW 1314
+ V + L + I Q++YYFS NL +D FLR MD G++ I+LIA+F RV+ LT +I LI +L+ S VVE+ +K+RRR E +W
Sbjct: 396 YSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREEPEKW 483
BLAST of Ca_04871 vs. SwissProt
Match: LARP1_MOUSE (La-related protein 1 OS=Mus musculus GN=Larp1 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 8.140e-12 Identity = 38/77 (49.35%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 1084 ILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRW 1314
I Q++YYFS NL +D FLR MD G++ I+LIA+F RV+ LT +I LI +L+ S VVE+ +K+RRR E +W
Sbjct: 382 IKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEMVEEKVRRREEPEKW 458
BLAST of Ca_04871 vs. SwissProt
Match: LARP7_XENTR (La-related protein 7 OS=Xenopus tropicalis GN=larp7 PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.300e-9 Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 1069 QLINSILNQVDYYFSDANLVKDDFLRSNMDEC--GWVSISLIANFPRVKNLTNNIELILESLRTSLVVEV--QGDKLRRR 1296
QL+ I QVD++F D NL KD FLR +++ G++ ISL+A+F ++K +T + +LI +++ S VVE+ G K+RRR
Sbjct: 35 QLLADIAKQVDFWFGDVNLHKDRFLREQIEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVEINLSGTKIRRR 114
BLAST of Ca_04871 vs. SwissProt
Match: LARP7_MACFA (La-related protein 7 OS=Macaca fascicularis GN=LARP7 PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.300e-9 Identity = 35/80 (43.75%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 1069 QLINSILNQVDYYFSDANLVKDDFLRSNMDEC--GWVSISLIANFPRVKNLTNNIELILESLRTSLVVE--VQGDKLRRR 1296
Q++ I QVD++F DANL KD FLR +++ G+V ISL+ +F ++K LT + +LI +LR+S VVE ++G ++RR+
Sbjct: 33 QVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRK 112
BLAST of Ca_04871 vs. SwissProt
Match: LARP7_HUMAN (La-related protein 7 OS=Homo sapiens GN=LARP7 PE=1 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.300e-9 Identity = 35/80 (43.75%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 1069 QLINSILNQVDYYFSDANLVKDDFLRSNMDEC--GWVSISLIANFPRVKNLTNNIELILESLRTSLVVE--VQGDKLRRR 1296
Q++ I QVD++F DANL KD FLR +++ G+V ISL+ +F ++K LT + +LI +LR+S VVE ++G ++RR+
Sbjct: 33 QVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRK 112
BLAST of Ca_04871 vs. SwissProt
Match: YLA3_SCHPO (Uncharacterized HTH La-type RNA-binding protein C1527.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1527.03 PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.697e-9 Identity = 33/91 (36.26%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 1084 ILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGD-------KLRRRNEWMRW-LPSAHR 1332
+ +Q++YYFS NL KD FLR +MD+ G+V ++ +A+F R+K+ + ++ L+ + + S +++V D K+RR+ W W LPS R
Sbjct: 329 LTSQLEYYFSIENLCKDMFLRKHMDDEGYVPLAFLASFNRIKSFSTDLNLLHAACKASDIIDVAIDLQSPMSIKVRRKETWSPWILPSESR 419
BLAST of Ca_04871 vs. SwissProt
Match: LARP7_MOUSE (La-related protein 7 OS=Mus musculus GN=Larp7 PE=1 SV=2) HSP 1 Score: 63.929 bits (154), Expect = 2.895e-9 Identity = 34/80 (42.50%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 1069 QLINSILNQVDYYFSDANLVKDDFLRSNMDEC--GWVSISLIANFPRVKNLTNNIELILESLRTSLVVE--VQGDKLRRR 1296
Q++ I QVD++F DANL KD FLR +++ G+V ISL+ +F ++K LT + +LI +L++S VVE ++G ++RR+
Sbjct: 27 QVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRK 106
BLAST of Ca_04871 vs. SwissProt
Match: LARP7_DANRE (La-related protein 7 OS=Danio rerio GN=larp7 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 2.895e-9 Identity = 30/80 (37.50%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 1069 QLINSILNQVDYYFSDANLVKDDFLRSNMDEC--GWVSISLIANFPRVKNLTNNIELILESLRTSLVVEV--QGDKLRRR 1296
QL++ + QV+++F D NL KD F++S +++ G++ I+++ F R+KNLT +++LI +L+ S +VEV +G ++RR+
Sbjct: 41 QLLSDVKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMKNLTADVKLIARALKNSTIVEVNDEGTRIRRK 120
BLAST of Ca_04871 vs. SwissProt
Match: LARP7_RAT (La-related protein 7 OS=Rattus norvegicus GN=Larp7 PE=1 SV=2) HSP 1 Score: 63.5438 bits (153), Expect = 3.781e-9 Identity = 34/80 (42.50%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 1069 QLINSILNQVDYYFSDANLVKDDFLRSNMDEC--GWVSISLIANFPRVKNLTNNIELILESLRTSLVVE--VQGDKLRRR 1296
Q++ I QVD++F DANL KD FLR +++ G+V ISL+ +F ++K LT + +LI +L++S VVE ++G ++RR+
Sbjct: 28 QVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRK 107
BLAST of Ca_04871 vs. TrEMBL
Match: G7J5C2_MEDTR (NAD(P)H-quinone oxidoreductase chain OS=Medicago truncatula GN=MTR_3g114340 PE=4 SV=1) HSP 1 Score: 402.905 bits (1034), Expect = 1.375e-109 Identity = 229/406 (56.40%), Postives = 262/406 (64.53%), Query Frame = 1
Query: 295 SNG--ISDVSPVMGAVSWPALSAKPTVKLXXXXXXXXXXXXXXPQGSITSHSPQKHANANVTVDANVKPTPPINCG--VGNNRQRSTRRGGGNGDSNTGP-----SNPVHSNLQQSAAPPFPVLQIPTTTS-PDGIHLYRNNNGWSPRSPVGVYVPPVNEHRSPSXXXXXXXXXXXXYGVRRNQGPGNLVNTRDPPHLHQRMHSSGFLTPTLPNSASYLGHQSL--RPFVNQAGFHEFCYYPTLPFEPFGGMPFLTHPPPPAMFFPVAE-----TQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSAHRRXXXXXXXXXXXXXXXXAADFDKITIDEA-------TTTNGES 1440
SNG +++V+PVMGAVSWPALSAKP+ KL QG + S+SPQK A A T AN + TPP+N V N +Q+ RGG N ++ GP SNP +N Q S +PPFPVLQIP T DG+ Y+NNNGW PRSP G Y PV+EH S YG RRNQ PGN +NTRD RMHS GFL PTLPNSA YLG Q + RPF+N AGFHEF YYPTL FEPFGGMPFLTHPPPPAMFFPVAE T N IL Q+DYYFSD NL D+FL+SNMDE GWV +SLIANFPRVKNLTNNIELIL+SLR S VVEV GDKLR+R EW R+L +++ ADFDKIT+DEA TTTNG+S
Sbjct: 104 SNGLVVAEVNPVMGAVSWPALSAKPSAKLTSDSISAVGSISIS-QGPVISNSPQKQATATATA-ANARHTPPMNHSHSVSNRQQKPMERGGVN-NNEPGPLSNNLSNPPQANHQPSVSPPFPVLQIPPNTFLVDGVQSYKNNNGWGPRSPAGGYGLPVDEH---SHRGNYGHRPRNNYGTRRNQDPGNTMNTRDAHPPQHRMHSEGFLRPTLPNSA-YLGSQPMPMRPFLNPAGFHEFYYYPTLQFEPFGGMPFLTHPPPPAMFFPVAEETPPTTPPTNIILKQIDYYFSDVNLTNDEFLKSNMDEHGWVPVSLIANFPRVKNLTNNIELILDSLRNSSVVEVNGDKLRKRKEWARFLSPVYQQVGSSSISSVGSTCKNIIADFDKITLDEATVLKNSKTTTNGDS 502
BLAST of Ca_04871 vs. TrEMBL
Match: G7J5U3_MEDTR (La-related protein 1B OS=Medicago truncatula GN=MTR_3g114450 PE=4 SV=1) HSP 1 Score: 384.03 bits (985), Expect = 6.610e-104 Identity = 215/366 (58.74%), Postives = 243/366 (66.39%), Query Frame = 1
Query: 295 SNG--ISDVSPVMGAVSWPALSAKPTVKLXXXXXXXXXXXXXXP--QGSITSHSPQKHANANVTVDANVKPTPPINCG--VGNNRQRSTRRGGGNGDSNTGP-----SNPVHSNLQQSAAPPFPVLQI-PTTTSPDGIHLYRNNNGWSPRSPVGVYVPPVNEHRSPSXXXXXXXXXXXXYGVRRNQGPGNLVNTRDPPHLHQRMHSSGFLTPTLPNSASYLGHQSL--RPFVNQAGFHEFCYYPTLPFEPFGGMPFLTHPPPPAMFFPVAE-----TQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSAHRR 1335
SNG +++VSPVMGAVSWPALSAKP+ KL QG + S+SPQK A A AN + TPP+N V N +Q+ RGGGN ++ GP SNP N Q S APPFPVLQI P T DG+ Y+NNNGW PRSP G Y PV+EH S YG RRNQ PGN +NTRD RMHS GFL PTLPNSA YLG Q + RPF+N AGFHEF YYPTL FEPFGGMPFLTHPPPPAMFFPVAE T N IL Q+DYYFSD NL D+FL+SNMDE GWV +SLIANFPRVKNLTNNIELIL+SLR S VVEV GDKLR+R EW R+L +++
Sbjct: 96 SNGLVVAEVSPVMGAVSWPALSAKPSAKLTSDSISAVDGAGSISISQGPVISNSPQKQATATA---ANARHTPPMNHSHSVSNRQQKPMERGGGN-NNEPGPLSNNLSNPPQVNHQPSVAPPFPVLQITPNTFLVDGVQSYKNNNGWGPRSPAGGYGLPVDEH---SHRGNYGHRPRNNYGTRRNQDPGNTMNTRDAHPPQHRMHSEGFLRPTLPNSA-YLGSQPMPMRPFLNPAGFHEFYYYPTLQFEPFGGMPFLTHPPPPAMFFPVAEETPPTTPPTNIILKQIDYYFSDVNLTNDEFLKSNMDEHGWVPVSLIANFPRVKNLTNNIELILDSLRNSSVVEVNGDKLRKRKEWARFLSPVYQQ 453
BLAST of Ca_04871 vs. TrEMBL
Match: K7KHP9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 2.599e-100 Identity = 229/502 (45.62%), Postives = 265/502 (52.79%), Query Frame = 1
Query: 1 MVTHTADXXXXXXXXXXXXXXXXXXXXXXRKNLPSPWIKVVRGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGISDVSPVMGAVSWPALS--AKPTVKLXXXXXXXXXXXXXX----PQGSITSHSPQKHANANVTVDANVKPTPPINCGVGNNRQRSTRRGGGNGDSNTGPSNPVHSNLQQSAA--------PPFPVLQIPTTTSPDGI---------HLYRNNNGWSPRSPVGVYVPPVNEHRSPSXXXXXXXXXXXX------YGVRRNQGPGNLVNTRDPPHLHQRMHSSGFLTPTLPNSASYLGHQSLRPFVNQAGFHEFCYYPTLPFEPFGGMPFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSAHRRXXXXXXXXXXXXXXXXAADFDKITIDEA 1419
MVT T D RKNLPSPW +VVRGAD SNG+S+V PVMGA SWP LS KPT KL PQ + S SPQK A N AN PTP +N G+ N RQRS ++ GG+ N G S PV +N + PPFPVL +P T GI YRNNN W R P G ++PP++EHRSPS YG RR+Q G NTRD QRM G + P PN A ++G Q +RPF N AGF EF Y+PTL FEPFGGMPF TH PPPAMFFPVAET L N+I NQ+DYYFSDANLVKD++LRSNMDE GWV I+LIA+FPRV++LT+NI+LIL+SLRTS VVEVQGDKLRR NEWM+WLPSA R AADF+KIT+DEA
Sbjct: 1 MVTTTVDSSSNHYSPTAATAAADTSNNFPRKNLPSPWAQVVRGADAEPNHQSPPSSSSSSFSSLDSINSNGPAVQTSDTTVKPAWKKPE---------SNGVSEVGPVMGAHSWPDLSESTKPTAKLTSDSSVKTAADEESLTTTPQDPVNSDSPQKQAIGN----ANPSPTPAMNYGMAN-RQRSMKQRGGSNGYNVG-SGPVQNNFSGATQNLPPPPPPPPFPVLPMPPRTFAHGIPGVPVPTPRDPYRNNN-WDARPPHGGFMPPMSEHRSPSRRGNAGHHPRGDGPYHNSYGSRRDQDRGGYANTRDAHVNQQRMPPRGLMRPPPPNPAPFMGPQPMRPFANPAGFPEFYYFPTLQFEPFGGMPFFTHAPPPAMFFPVAETPLTNTIANQIDYYFSDANLVKDEYLRSNMDEQGWVPITLIASFPRVRSLTSNIKLILDSLRTSTVVEVQGDKLRRCNEWMKWLPSAQLRANSGSISPSGSSSNNLAADFEKITVDEA 486
BLAST of Ca_04871 vs. TrEMBL
Match: I1K7H8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 353.984 bits (907), Expect = 7.325e-95 Identity = 212/472 (44.92%), Postives = 255/472 (54.03%), Query Frame = 1
Query: 88 RKNLPSPWIKVVRGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGISDVSPVMGAVSWPALS--AKPTVKLXXXXXXXXXXXXXX---PQGSITSHSPQKHANANVTVDANVKPTPPINCGVGNNRQRSTRRGGGNGDSNTGPSNPVHSNLQQSAA--------PPFPVLQIPTTTSPDGI---------HLYRNNNGWSPRSPVGVYVPPVNEHRSPSXXXXXXXXXXXX------YGVRRNQGPGNLVNTRDPPHLHQRMHSSGFLTPTLPNSASYLGHQSLRPFVNQAGFHEFCYYPTLPFEPFGGMPFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSAHRRXXXXXXXXXXXXXXXXAADFDKITIDEA 1419
+K +PSPW +VVRGAD +NG+++V PVMGA SWP LS KPT KL PQG +TS PQK A AN A PTP +N G+ N ++ +RGG NG+ N G S PV +N + PPFPVL +P +T GI YRNNN W R G ++PP+NEHRSPS YG RR+Q NTRD QRM G + P PN A ++G Q +RP N AGF E+ Y+PTL FEPFGGMPF TH PPPAMF+PVAET L N+I NQ+DYYFSDANLVKD++LRSNMDE GWV ISLIA+FPRV++LT+NI+LIL+SLRTS VEVQGDKLRRR EWM+WLPS AADF+KIT+D+A
Sbjct: 26 QKTMPSPWAQVVRGADAEPNDQSPPSSSSSSSLDSINSNGPAVQTSDIAVKPAWKKPE-----------ANGVAEVGPVMGAHSWPDLSESTKPTAKLTSDSSVKTAADEESTTTPQGPVTSDPPQKQATAN----AKPSPTPAMNYGMANRQRSMKQRGGANGN-NVG-SGPVQNNFSGTTPNLPPPPPPPPFPVLLMPPSTFAHGIPGAPVPTPRDPYRNNN-WDARPQHGGFMPPMNEHRSPSHRGNAGHHPRGEGPYHNSYGNRRDQDRVGYANTRDAHVNQQRMPPRGLMRPPPPNPAPFMGPQPMRPLANPAGFPEYYYFPTLQFEPFGGMPFFTHAPPPAMFYPVAETPLTNTIANQIDYYFSDANLVKDEYLRSNMDEQGWVPISLIASFPRVRSLTSNIKLILDSLRTSTFVEVQGDKLRRRTEWMKWLPSVQLLAKSGSISPSESSSNNLAADFEKITVDDA 479
BLAST of Ca_04871 vs. TrEMBL
Match: I1MC18_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 271.552 bits (693), Expect = 4.781e-70 Identity = 179/402 (44.53%), Postives = 216/402 (53.73%), Query Frame = 1
Query: 295 SNGIS--DVSPVMGAV-SWPAL--SAKPTVKLXXXXXXXXXXXXXX---PQGSITSHSPQKHANANVTVDANVKPTPPINCGVGNNRQRSTRRGGGNGDSNTGPSNPVHSNLQQSAAPP--FPVLQIPTTTSPDGI---------HLYRNNNGWSPRSPVGVYVPPVNEHRSPSXXXXXXXXXXXX------YGVRRN-QGPGNLVNTRDPPHLHQRMHSSGFLTPTLPNSASYLGHQSLRPFVNQAGFHEFCYYPTLPFEPFGGMPFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSAHRRXXXXXXXXXXXXXXXXAADFDKITIDEAT 1422
SNG+ + PVMGA SWP L S K + KL Q +TS SPQK A KP+ N V + RQRS +R GG+ + +GPS SN + PP FPV Q+P + + + YRNNN W R VG +VP +NE+R S YG RR+ Q GN VN RD RM G L PN+A+++G Q + PF N F EF YY + E F GMPF TH PPP FF AE+ L N I+ Q++YYFSDANLVKD FLRS MDE GWV ++LIA+FPRVKNLT NI+LIL+SLRTS VVEVQGDKLRR NEWMRWLPSA RR A+F I ++E T
Sbjct: 117 SNGVVVVETGPVMGAAESWPTLLASTKGSAKLPAESSSKTVTDDGSLSTSQWPMTSQSPQKQATTIA------KPSSAPNYNVPS-RQRSMKRVGGSS-TGSGPSQSNFSNPPPTPPPPPPFPVYQLPPVSYGNMVPGVPDHAPRDHYRNNN-WDARPLVGGFVPAMNEYRGSSRRGYFGPHPRGDGSYHNSYGSRRDHQDRGNYVNARDAFLPQPRMPPRGLLRHPPPNTAAFVGPQPIGPFANPISFPEFYYYQPVTVEQFTGMPFFTHSPPPTPFFSAAESPLSNMIVYQIEYYFSDANLVKDAFLRSKMDEQGWVPVTLIADFPRVKNLTTNIQLILDSLRTSTVVEVQGDKLRRLNEWMRWLPSAQRRSNSGSISPSGSTHNNLTANFQTIILEETT 509
BLAST of Ca_04871 vs. TrEMBL
Match: E6NTY6_9ROSI (JHL20J20.1 protein OS=Jatropha curcas GN=JHL20J20.1 PE=4 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 3.207e-66 Identity = 161/411 (39.17%), Postives = 220/411 (53.53%), Query Frame = 1
Query: 295 SNGISD-VSPVMGAVSWPALSAKPTVKLXXXXXXXXXXXXXXPQGSITSHS----PQKHANANVTVDANVKPTPPINCGVGNNRQRSTRRGGGNGDSNTGPSNPVHSNLQQSAA-----------PPFPVLQIPTT-------TSPDGIHL---YRNNNGWSPRSPVGVYV---PPVNEHRSPSXXXXXXXXXXXXY----GVRRNQGPGNLVNTRDPPHLHQRMHSSGFLTPTLPNSASYLGHQSLRPFVNQAGFHEFCYYPTLPFEPFGGMPFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSAHRRXXXXXXXXXXXXXXXXAAD-FDKITIDEATT 1425
SNG+++ VSPVMGAVSWPALS GSI ++ P K ++N +A + P RQRS +RGG +G S T HS+ Q + PPFP+ +P PD YR NN W PR PVG +V P VN+HR S Y G RR+Q G+ N RD P + Q+ GF+ P PN+ +++ Q +RPF N GF + Y PTLP EPF G+PF+TH P P + PV E L +++Q++YYFSDANL+KDDFL+SNMD+ GWVSI+LIA F RVK++T +++LIL+SLRTS ++EVQ +K+RRRN+WM+W+P + R + F K+T++E T+
Sbjct: 101 SNGVAEAVSPVMGAVSWPALSESTKSS-------PKSSSADSSDGSIANNQVPVIPPKQTSSNAKSNATSNQSMPA-------RQRSIKRGG-SGSSTTSGGGHSHSHSQSNFTHPPPPPPPPPPPPFPLFAMPPNGYGNMVPAMPDRSPRDPPYRGNNNWEPR-PVGGFVTQPPAVNDHRHSSRRGNFGSRGDGTYHHNFGGRRDQDRGHYGNVRDAP-VQQQRSPRGFVRPPPPNTTTFVPPQPVRPFANPIGFPDVVYIPTLPLEPFRGVPFITHAPAPGIIVPVPEPPLPAMLVHQIEYYFSDANLIKDDFLKSNMDDQGWVSITLIAGFNRVKSMTKDVQLILDSLRTSTILEVQEEKVRRRNDWMKWIPGSSRLSIDSGLQSFNSPSQGMLTNSFQKMTVEEVTS 494
BLAST of Ca_04871 vs. TrEMBL
Match: M5Y7L2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018923mg PE=4 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 3.319e-63 Identity = 169/421 (40.14%), Postives = 222/421 (52.73%), Query Frame = 1
Query: 295 SNGISDVSP--VMGAVSWPALS--AKPTVKLXXXXXXXXXXXXXXPQGSIT-------SHSP--QKHANANVTVDANVKPTPPINCGVGNNRQRSTRRGGGNGDSNTGPSNPVHSNLQQSAAPP-------FPVLQ------IPTTTSPDGIHLYRNNNGWSPRSPVGVYVPP---VNEHRSPSXXXXXXXXXXXX------YGVRRNQGPGNLVNTRDPPHLHQ-RMHSSGFLTPTLPNSASYLGHQSLRPFVNQAGFH-EFCYYPTLPFEPFGGMPFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSAHR-RXXXXXXXXXXXXXXXXAADFDKITIDEATTTNGEST 1443
+N +VSP VMGAVSWPALS + + KL GS++ +HSP ++H+ N + ++ P RQR ++RGGG S+TG + HS PP FP+L +PT P N W R PVG +V VN+HR+ S +G +R+Q GN +N RD H+HQ R G + P PN+A++ Q RPF N GF EF Y PTLP EP GMPF++ P P MF PVAE+ L + I+NQ+DYYFSDANL+KDDFLRSNMD GWV ISLIANFPRVK+LT NI+LIL+SLR S +VEV DK+RR NEWM+W+P+ + A F+K+T++E + +T
Sbjct: 110 ANDDVEVSPTTVMGAVSWPALSESTRASPKLPADSSSKTVSDATVTHGSVSVSQAPVITHSPNSKRHSTNNASPNSTSNNAFPA-------RQRPSKRGGG---SSTGGGH-AHSGFGHPPTPPPPPPFPVFPILPNGYGNLVPTMPDPSSRDPSFRGNSWDVR-PVGGFVTQSHQVNDHRNNSRRGNFGPHPRGDGPYHNNHGGKRDQDRGNYMNARDA-HMHQHRAPPRGLVRPAPPNTAAF-APQPARPFANPMGFPGEFVYIPTLPLEPMRGMPFISQAPHPTMFIPVAESPLPSLIVNQIDYYFSDANLIKDDFLRSNMDVQGWVPISLIANFPRVKSLTTNIQLILDSLRASSIVEVHDDKVRRLNEWMKWIPAGSQLPFESGSSSPGVLSHNTLATSFEKMTVEEEAPSQTNTT 516
BLAST of Ca_04871 vs. TrEMBL
Match: K7MP28_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.661e-63 Identity = 164/373 (43.97%), Postives = 196/373 (52.55%), Query Frame = 1
Query: 295 SNGIS-DVSPVMGAV-SWPAL------SAKPTVKLXXXXXXXXXXXXXXPQGSITSHSPQKHANANVTVDANVKPTPPINCGVGNNRQRSTRRGGGNGDSNTGPSNPVHSNLQQSAAPP-FPVLQIPTTT---------SPDGIHLYRNNNGWSPRSPVGVYVPPVNEHRSPSXXXXXXXXXXXX------YGVRRN-QGPGNLVNTRDPPHLHQRMHSSGFL--TPTLPNSASYLGHQSLRPFVNQAGFHEFCYYPTLPFEPFGGMPFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSAHR 1332
SNG+ + PVMGA SWP L SAK + PQG + S SPQK A N KP N V RQRS +R GG+ + + PS SN PP FPV Q+P + P YRNNN W VG +VP +N +R S YG RR+ Q GN VNTRD RM G TP +A+++G Q + PF GF EF YY + E F GM F H PPP FF AE+ L N I+ Q++YYFSDANLVKD FLRS MDE GWV ++LIA+FPRVK+LT NI+LIL+S+RTS +VEVQGDKLRR NEW RWL S R
Sbjct: 107 SNGVVVETGPVMGAAESWPTLLASTKGSAKLPPESSSNTVIDYGSLSTSPQGPMASQSPQKQATTNA------KPNSAPNYNVPG-RQRSMKRVGGSSSTVSDPSQGNFSNPPPPPPPPPFPVYQLPPVSYCNMVPGVPDPAPRDHYRNNN-WDAGPMVGGFVPAMNGYRGSSRRGYFGPHPRGDGSYHNSYGSRRDHQDRGNYVNTRDAFVPQPRMPPRGLPRHTPPPTTAAAFVGPQPIGPFAKPIGFPEFYYYQPVTVEQFTGMSFFAHSPPPTPFFSAAESPLSNMIVYQIEYYFSDANLVKDAFLRSKMDEQGWVPVTLIADFPRVKSLTTNIQLILDSIRTSAIVEVQGDKLRRLNEWKRWLSSTQR 471
BLAST of Ca_04871 vs. TrEMBL
Match: F6GZT4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14900 PE=4 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.630e-60 Identity = 159/419 (37.95%), Postives = 211/419 (50.36%), Query Frame = 1
Query: 295 SNGISDVSPVMGAVSWPALSAKPTVKLXXXXXXXXXXXXXXP---QGSITSHSPQKHANANVTVDANVKPTPPINCGVGNNRQRSTRRGGGNGDSNTG--PSNPVHSNLQQSAAPPFPVLQIP--------------TTTSPDGIHLYRNNNGWSPRSPVGVYVPP---VNEHRSP--------SXXXXXXXXXXXXYGVRRNQGPGNLV------NTRDPPHLHQRMHSSGFLTPTLPNSAS--YLGHQSLRPFVNQAGF----HEFCYYPTLPFEPFGGMPFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSAHR-RXXXXXXXXXXXXXXXXAADFDKITIDEAT 1422
SN + +V PVMGAVSWPALS QG + HSPQK AN +++ P RQRS + GGG+ + G PS P PP+P+ ++P +T P YRNN W R P+G +VP +++H P YG RR+Q GN N RD QR GF+ P S+S ++ Q +RPF+N AG+ + Y+P LP EPF +PF+ H PPP MF PV + L ++NQ++YYFSD NL+KDD+LRS MD+ GWV I+LIA FPRV++LTN+I LIL+SLRTS VEVQGDK+RRRNEWM+WLPS+ R + F K+T++E +
Sbjct: 116 SNDVVEVGPVMGAVSWPALSESTRASPRSSSDSPKPAVDGSAASIQGPVIPHSPQKQVPANTNPNSSQNHASPF-------RQRSIKSGGGSSQTVHGHLPSQP------PPPPPPYPLFEMPQNKYAKMAPQVLDSSTREPP----YRNNT-WETR-PIGGFVPQPRGLSDHPLPRNSRRGNFGPHPRGDGPHHNNYGGRRDQDRGNYEWNSRSSNVRDIHMQPQRAPPRGFIRAA-PQSSSPRFMTPQPIRPFMNPAGYPDMPSQMYYFPALPSEPFRSVPFVAHAPPPPMFIPVPDPPLPTLLVNQIEYYFSDVNLIKDDYLRSYMDDQGWVPITLIAGFPRVQSLTNSIPLILDSLRTSTSVEVQGDKVRRRNEWMKWLPSSARFHADLGLQSPGGLSYGTLVSSFQKVTVEEGS 514
BLAST of Ca_04871 vs. TrEMBL
Match: B9H517_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_818830 PE=4 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.344e-55 Identity = 148/373 (39.68%), Postives = 200/373 (53.62%), Query Frame = 1
Query: 295 SNGISDV-SPVMGAVSWPALS--AKPTVK---LXXXXXXXXXXXXXXPQGSITSHSPQKHANANVTVDANVKPTPPINCGVGNNRQRSTRRG-GGNGDSNTGPSNPVHSNLQQSAAPP---FPVLQIPTT-------TSPDGIH---LYRNNNGWSPRSPVGVYVPP---VNEHRSPSXXXXXXXXXXXX-----YGVRRNQGPGNLVNTRDPPHLHQRMHSSGFLTPTLPNSASYLGHQSLRPFVNQAGFHEFCYYPT-LPFEPFGGMPFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSA 1326
SNG++++ SPVM A SWPALS KP+ K QG + ++SP+K N+N + T P+ RQR RRG GG+ S++G + +S PP FP+ +P PD LYR NN W PR P+G +VPP V+EHR PS Y RR Q G+ N+RD QR + GF P+ NS +++ QS+RPF N G+H+ + P + EP+ P + H P M P+ + L +LNQ++YYFSD NL KD FL+S MD+ GWV I+LIA F RV+ +TNNI+ ILE LRTS ++EVQ DK+RRRN+WM WLPS+
Sbjct: 78 SNGVAEITSPVMDATSWPALSESTKPSPKPSPAESSSKIVSDGSIPTSQGPVIANSPKKQGNSNAKSISATNHTMPV-------RQRPVRRGSGGSSGSSSGGGHSQNSFTHPPPPPPPPPFPIFPMPPNGFTNLVPAMPDQSPRETLYRGNN-WEPR-PIGGFVPPPPVVSEHRRPSRRGNFGQPPGDGSHRNNYVGRREQDRGHHGNSRDVHVQQQRAPTRGFPRPSPQNSGTFIPPQSVRPFANPMGYHDMLFIPPPITLEPY---PVVPHMQSPTMLMPIPQP-LPLLLLNQIEYYFSDMNLSKDGFLKSKMDDEGWVPITLIAGFNRVRIMTNNIQFILECLRTSTLLEVQDDKVRRRNDWMNWLPSS 437
BLAST of Ca_04871 vs. DB:Swiss
Match: LRP1B_ARATH (La-related protein 1B OS=Arabidopsis thaliana OX=3702 GN=LARP1B PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.195e-23 Identity = 59/147 (40.14%), Postives = 88/147 (59.86%), Query Frame = 1
Query: 892 PTLP-NSASYLGHQSLRPFVNQAGFHEFCYYPTLPF---EPFGGM-PFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWL 1317
P+ P +SA Y+ L + + ++ + +P +P G + PF P M+F + L N IL QV+YYFS NL +D+ LR M++ GWV + +IA F R+ LTNNI+ ILE+LR+S VVE+QG+ LRRR +W ++L
Sbjct: 273 PSFPASSAQYMAAPQLGSYGGPIIYPDYAQHVFMPHPSPDPMGLVGPFPLQP----MYFRNFDAILYNKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYL 415
BLAST of Ca_04871 vs. DB:Swiss
Match: LRP1C_ARATH (La-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=LARP1C PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.927e-23 Identity = 117/375 (31.20%), Postives = 165/375 (44.00%), Query Frame = 1
Query: 295 SNGISDVSPVMGAVSWPALSAKPTVKLXXXXXXXXXXXXXXPQGSITSHS---PQKHANANVTV-----DANVKPTPPINCGVGNNRQRS-TRRGGGNGDSNTGPSNPVH------------SNLQQSAAPPFPVLQIPTTTSPDGIHLYRNNNGWSPRSPVGVYVPPVNEHRSPSXXXXXXXXXXXXYGVRRNQGPGNL-------VNTRDPPHLHQRMHSSGFL---TPTLPNSASYLGHQ---SLRPFVNQAGFHEFCYYPTLPFEPFGGMPFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWL 1317
SNG S+V PVMGA SWPALS + SS ++ +P S S S Q ANA+V AN PTP ++RQRS +R G +G +N S P S Q+ F T +P YRN NG N H+S +G RRNQ GN N R+ QR + F+ +PT+ ++ Q S PF + + YYP +P+ M + H P F+ + L + Q+ YYFSD NL+ D +LR M+ G+V + ++A F +V LT+NI+ I+E+L+ S VEVQGD +R+R+ W W+
Sbjct: 120 SNGASEVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANASVPAPKQAGRANPNPTP------NHSRQRSFKQRNGASGSANGTVSQPSAQGSFTELPSHNPSPRGQNQKNGFASQNHGGTENPSQRDSYRNQNG--------------NHHQS--------------HGGRRNQEHGNQNWTFQRSFNGREGNAQSQRG-TPAFVRHPSPTVQPIPQFMAAQPFPSHIPFPTE--LAQSSYYPRMPY-----MTPIPHGP--QFFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWV 450
BLAST of Ca_04871 vs. DB:Swiss
Match: LRP1A_ARATH (La-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=LARP1A PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.576e-19 Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 1
Query: 1072 LINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSAHR 1332
L + +L QV+YYFSD NL D +L S MDE GWV +IA F RVK +T +++ I+ +L S VEVQGD++R+R++W W+P++ +
Sbjct: 278 LRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKK 364
BLAST of Ca_04871 vs. DB:Swiss
Match: LAR1B_HUMAN (La-related protein 1B OS=Homo sapiens OX=9606 GN=LARP1B PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.982e-17 Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 1051 FPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRW 1314
+PV E L I Q++YYFS NL +D FLR MDE G++ ISLIA F RV+ LT N+ LILE+L+ S VE+ +K+R++ E +W
Sbjct: 208 YPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKW 295
BLAST of Ca_04871 vs. DB:Swiss
Match: LARP1_HUMAN (La-related protein 1 OS=Homo sapiens OX=9606 GN=LARP1 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.529e-15 Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 1048 FFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRW 1314
+ V + L + I Q++YYFS NL +D FLR MD G++ I+LIA+F RV+ LT +I LI +L+ S VVE+ +K+RRR E +W
Sbjct: 395 LYSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREEPEKW 483
BLAST of Ca_04871 vs. DB:Swiss
Match: LARP1_MOUSE (La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 7.139e-15 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 1048 FFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRW 1314
+ + + L + I Q++YYFS NL +D FLR MD G++ I+LIA+F RV+ LT +I LI +L+ S VVE+ +K+RRR E +W
Sbjct: 370 IYSMDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEMVEEKVRRREEPEKW 458
BLAST of Ca_04871 vs. DB:Swiss
Match: LARP1_CAEEL (La-related protein 1 OS=Caenorhabditis elegans OX=6239 GN=larp-1 PE=4 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.752e-14 Identity = 40/96 (41.67%), Postives = 59/96 (61.46%), Query Frame = 1
Query: 1009 GMPFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLVKDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRR 1296
+PF PP PV + L + Q++YYFS+ NL KD FLR M G++ ++LIA+FPRV++LT + LILE+L+ S V++ D L+ R
Sbjct: 558 AIPFAPIYNPPTAPRPVTDDTLKEYVRKQIEYYFSEENLQKDFFLRRKMGPEGYLPVALIASFPRVRSLTEDYSLILEALKDSTKVDMSPDGLQIR 653
BLAST of Ca_04871 vs. DB:Swiss
Match: LARP7_MACFA (La-related protein 7 OS=Macaca fascicularis OX=9541 GN=LARP7 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.354e-11 Identity = 35/81 (43.21%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 1069 QLINSILNQVDYYFSDANLVKDDFLRSNMDEC--GWVSISLIANFPRVKNLTNNIELILESLRTSLVVE--VQGDKLRRRN 1299
Q++ I QVD++F DANL KD FLR +++ G+V ISL+ +F ++K LT + +LI +LR+S VVE ++G ++RR+
Sbjct: 33 QVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKK 113
BLAST of Ca_04871 vs. DB:Swiss
Match: LARP7_HUMAN (La-related protein 7 OS=Homo sapiens OX=9606 GN=LARP7 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.575e-11 Identity = 35/81 (43.21%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 1069 QLINSILNQVDYYFSDANLVKDDFLRSNMDEC--GWVSISLIANFPRVKNLTNNIELILESLRTSLVVE--VQGDKLRRRN 1299
Q++ I QVD++F DANL KD FLR +++ G+V ISL+ +F ++K LT + +LI +LR+S VVE ++G ++RR+
Sbjct: 33 QVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKK 113
BLAST of Ca_04871 vs. DB:Swiss
Match: LARP7_MOUSE (La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.829e-11 Identity = 34/81 (41.98%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 1069 QLINSILNQVDYYFSDANLVKDDFLRSNMDEC--GWVSISLIANFPRVKNLTNNIELILESLRTSLVVE--VQGDKLRRRN 1299
Q++ I QVD++F DANL KD FLR +++ G+V ISL+ +F ++K LT + +LI +L++S VVE ++G ++RR+
Sbjct: 27 QVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKK 107 The following BLAST results are available for this feature:
BLAST of Ca_04871 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 16
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BLAST of Ca_04871 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_04871 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_04871_v1.0_kabuli ID=Ca_04871_v1.0_kabuli; Name=Ca_04871; organism=Cicer arietinum; type=mRNA; length=1446bpback to top protein sequence of Ca_04871_v1.0_kabuli >Ca_04871_v1.0_kabuli ID=Ca_04871_v1.0_kabuli; Name=Ca_04871_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=481bpback to top mRNA from alignment at Ca5:31687740..31690487+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_04871_v1.0_kabuli ID=Ca_04871_v1.0_kabuli; Name=Ca_04871; organism=Cicer arietinum; type=mRNA; length=2748bp; location=Sequence derived from: Ca5:31687740..31690487+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:31687740..31690487+ >Ca_04871_v1.0_kabuli ID=Ca_04871_v1.0_kabuli; Name=Ca_04871; organism=Cicer arietinum; type=CDS; length=1446bp; location=Sequence derived from: Ca5:31687740..31690487+ (Cicer arietinumback to top |