Ca_11349, Ca_11349_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_11349
Unique NameCa_11349_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length798
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:42647682..42649038 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR406Pisum sativum Cameor genome v1aPisum sativum
capsR437Pisum sativum Cameor genome v1aPisum sativum
capsR443Pisum sativum Cameor genome v1aPisum sativum
cavuR363Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR377Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR426Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR447Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0552Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0581Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0029Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0037Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0242Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0340Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0384Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0755Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL054Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR372Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR393Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR378Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR379Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR438Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR444Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR398Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR417Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR470Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR346Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR365Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR197Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL272Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL486Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR380Cicer arietinum
cacarR404Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat07G0196200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat7g076920.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.001G261900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat05G0288800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-KK1_019872Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.6g054560.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va01G040550.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg30424.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun01g247400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Tiffany.R1.6g045400.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_014638319.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan01g105300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
jg53550.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va03G085290.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun03g167500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.L002146.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.2g111080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr03.3740Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_21821Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr01.2322Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.2g091320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_025141Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004502314.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004504381.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_11349-CDS1Ca_11349-CDS1Cicer arietinumCDS
Ca_11349-CDS2Ca_11349-CDS2Cicer arietinumCDS
Ca_11349-CDS3Ca_11349-CDS3Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_11349_v1.0_kabuliCa_11349_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_11349 vs. SwissProt
Match: FB76_ARATH (F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.973e-59
Identity = 112/168 (66.67%), Postives = 129/168 (76.79%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPLLTWSINPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGG-FPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLD 726
            A R L  C+  G     Y +  NV EGRRFLVQANARELAAVLS+G   Q   TW ++ +QPP P V       CPLLSDFGCNVPAPE HPA++F+ +WFA+RGG  PG G+RLCSH+GCGRPETRKHEFRRCSVCG VNYCSRACQALDWK RHK++CAPV+RWL+
Sbjct:  195 ALRELGHCLQDG-----YGVPQNVSEGRRFLVQANARELAAVLSSGI--QARSTW-LSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLE 354

HSP 2 Score: 126.331 bits (316), Expect = 2.038e-28
Identity = 61/97 (62.89%), Postives = 77/97 (79.38%), Query Frame = 1 
Query:    1 MPEKPPGVSDLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM 291
            +PE   G +DL +S+PDDLV+SIL KL ST+  P+DFI VL+TCKRLK L ++ IVLS+ S K ++VKA NW + +HRFLKRCVDAG+ EACYTLGM
Sbjct:   34 VPENTTG-ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGM 129
[Close]
BLAST of Ca_11349 vs. SwissProt
Match: FB342_ARATH (F-box protein At5g50450 OS=Arabidopsis thaliana GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.589e-33
Identity = 76/166 (45.78%), Postives = 95/166 (57.23%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPLLTWSINPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWL 723
            A R L  C+  G     Y +  +V EGRR L+QANARELA  L +  S +                    +G     L+D    VP  E HP ++F+ EWF+        G+R+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALDW+ +HKVEC P++ W+
Sbjct:  173 ALRELGHCLQDG-----YGVPRDVSEGRRLLIQANARELACSLRSYLSLK--------------------SGDENETLTDLSV-VPVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECTPLDLWV 312

HSP 2 Score: 115.931 bits (289), Expect = 2.754e-25
Identity = 60/118 (50.85%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:   22 VSDLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM-------NVIEGRRFLVQANARELAAVL 354
            V++ FE L DDL++SIL KL+++A+SPSDF+TVL TCKRL  LGL  +VLSKA  +TL+V A+ W DS+H+FLK CV+AGN +A Y+LGM       N + G   + +A  +  A  L
Sbjct:   18 VNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPAL 135
[Close]
BLAST of Ca_11349 vs. TrEMBL
Match: G7JBZ1_MEDTR (F-box protein OS=Medicago truncatula GN=MTR_3g085330 PE=4 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 1.562e-69
Identity = 131/172 (76.16%), Postives = 143/172 (83.14%), Query Frame = 1 
Query:  232 RFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNS-KQPLLTWSINP--NQPPQPQVRA----IAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLD 726
            R L  C+  G     Y +  NVIEGRRFLVQANARELAAVLSNGN+ KQPLLTWS+NP  +QPPQ +V A    ++GSGCPLLSDFGCNVP  E HPA++FMTEWF IRGGFPG GMRLCS+SGCGRPETRKHEFRRCSVCG VNYCSRACQALDWKFRHK ECAPVERWL+
Sbjct:  192 RELGHCLQDG-----YGVKQNVIEGRRFLVQANARELAAVLSNGNNNKQPLLTWSVNPGSSQPPQLRVLAGAGSVSGSGCPLLSDFGCNVPVQETHPANRFMTEWFDIRGGFPGPGMRLCSNSGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLE 358

HSP 2 Score: 162.155 bits (409), Expect = 1.576e-37
Identity = 79/93 (84.95%), Postives = 83/93 (89.25%), Query Frame = 1 
Query:   13 PPGVSDLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM 291
            P   SD FE LPDD+VLSILGKLSSTA SPSDFI+VLITCKRL  L L+S+VLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGN EACYTLGM
Sbjct:   32 PQNTSDFFELLPDDIVLSILGKLSSTATSPSDFISVLITCKRLNGLSLNSVVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNIEACYTLGM 124
[Close]
BLAST of Ca_11349 vs. TrEMBL
Match: K7LRZ7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 9.476e-67
Identity = 123/167 (73.65%), Postives = 135/167 (80.84%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPLLTWSINPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLD 726
            A R L  C+  G     Y +  NV EGRRFLVQAN RELAAVLS GN+K+P LTWS  P   P P++R+  GSGCPLLSD+GCNVPAPE HPAS+FM+EWF IRGGFP +GMRLCS SGCGRPETR+HEFRRCSVCG VNYCSRACQALDWKFRHK ECAPVERWLD
Sbjct:   84 ALRELGHCLQDG-----YGVKQNVTEGRRFLVQANVRELAAVLSAGNNKRPWLTWSHQP--VPHPRLRSETGSGCPLLSDYGCNVPAPEVHPASQFMSEWFDIRGGFPSAGMRLCSQSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLD 243
[Close]
BLAST of Ca_11349 vs. TrEMBL
Match: I1MYF3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 7.508e-64
Identity = 120/167 (71.86%), Postives = 134/167 (80.24%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPLLTWSINPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLD 726
            A R L  C+  G     Y + +NV EGRRFLVQANARELAAVLS GN+K+P LTWS +P   P+ +      SGCPL+SD+GCNVPAP+AHPAS+FM+EWF IRGGFPG  MRLCSHSGCGRPETR+HEFRRCSVCG VNYCSRACQALDWKFRHK ECA VERWLD
Sbjct:  170 ALRELGHCLQDG-----YGVKLNVTEGRRFLVQANARELAAVLSAGNTKRPWLTWSHHPVTHPRLR------SGCPLMSDYGCNVPAPDAHPASQFMSEWFDIRGGFPGPDMRLCSHSGCGRPETRRHEFRRCSVCGLVNYCSRACQALDWKFRHKAECATVERWLD 325

HSP 2 Score: 150.599 bits (379), Expect = 4.747e-34
Identity = 74/88 (84.09%), Postives = 78/88 (88.64%), Query Frame = 1 
Query:   28 DLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM 291
            D F+SLPDDLVLSIL KLSSTA SPSDFI+VLITCKRL SLGL S+VLSKAS+KT SVKAKNWCDS HRFLK C DAGN EACYTLGM
Sbjct:   17 DFFDSLPDDLVLSILCKLSSTATSPSDFISVLITCKRLNSLGLHSLVLSKASHKTFSVKAKNWCDSLHRFLKHCADAGNIEACYTLGM 104
[Close]
BLAST of Ca_11349 vs. TrEMBL
Match: B9GML2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_640037 PE=4 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.154e-62
Identity = 122/169 (72.19%), Postives = 133/169 (78.70%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPLLTW-SINPNQPPQPQVRAIAG-SGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLD 726
            A R L  C+  G     Y +  NV EGRRFLVQANARELAAVLSN +S  P   W + NP+  P  +  +  G SGCPLLSDFGCNVPAPEAHPAS+FMTEWFAIRGG  GSG+RLCSH+GCGRPETRKHEFRRCSVCGAVNYCSRACQALDWK RHK ECAPVERW+D
Sbjct:  216 ALRELGHCLQDG-----YGVRQNVTEGRRFLVQANARELAAVLSNPDSGLPTRAWLTWNPHAHPNHRHPSENGPSGCPLLSDFGCNVPAPEAHPASRFMTEWFAIRGGSAGSGLRLCSHTGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKEECAPVERWVD 379

HSP 2 Score: 139.813 bits (351), Expect = 8.378e-31
Identity = 68/91 (74.73%), Postives = 77/91 (84.62%), Query Frame = 1 
Query:   19 GVSDLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM 291
            G +DLFESLPDDLV+SIL KLSS+A+ PSDFI VLITC+RL  LGL S+VLSKAS K+ ++KA NW DSAHRFLK C DAGN EACYTLGM
Sbjct:   60 GETDLFESLPDDLVISILCKLSSSASCPSDFINVLITCRRLNGLGLHSLVLSKASPKSFAIKANNWSDSAHRFLKLCADAGNAEACYTLGM 150
[Close]
BLAST of Ca_11349 vs. TrEMBL
Match: I1KS21_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 4.120e-62
Identity = 117/167 (70.06%), Postives = 129/167 (77.25%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPLLTWSINPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLD 726
            A R L  C+  G     Y +  N+ EGRRFLVQANARELAAVLS G + + LL+W++ P Q  Q       GSGCPLLSDFGCNVPAP+ HPAS FMTEWFA  GG PG G+RLCS++GCGRPETRKHEFRRCSVCG VNYCSRACQALDWKFRHK ECAPVERWLD
Sbjct:  215 ALRELGHCLQDG-----YGVRQNIAEGRRFLVQANARELAAVLSTGAAARTLLSWNLQPQQLRQ-------GSGCPLLSDFGCNVPAPDVHPASLFMTEWFAAHGGSPGPGLRLCSNAGCGRPETRKHEFRRCSVCGEVNYCSRACQALDWKFRHKAECAPVERWLD 369

HSP 2 Score: 134.42 bits (337), Expect = 3.520e-29
Identity = 68/97 (70.10%), Postives = 75/97 (77.32%), Query Frame = 1 
Query:    4 PEK-PPGVSDLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM 291
            PEK   G  D FESLPDDLV+SI  KLSSTA  PSDF+ VLIT KRL  L L S+VLSKAS +T ++KAK WCDSAH+FLK C DAGN EACYTLGM
Sbjct:   53 PEKLAAGRYDFFESLPDDLVISIFCKLSSTATKPSDFVNVLITSKRLNRLALHSLVLSKASPRTFTIKAKYWCDSAHKFLKHCADAGNIEACYTLGM 149
[Close]
BLAST of Ca_11349 vs. TrEMBL
Match: B9GZP6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_647055 PE=4 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.325e-60
Identity = 121/169 (71.60%), Postives = 130/169 (76.92%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPLLTW-SINPNQPPQPQVRAIAG-SGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLD 726
            A R L  C+  G     Y +  NV EGRRFLVQANARELAAVLS  NS  P  TW S NP+  P  +     G SGCPLLSDFGCNVPAPE+HPAS+FMTEWFAIRGG  GSG+RLCSH+GCGR ETRKHEFRRCSVCGAVNYCSRACQALDWK RHK  CAPVERW+D
Sbjct:  215 ALRELGHCLQDG-----YGVRQNVTEGRRFLVQANARELAAVLSKHNSGFPTRTWFSWNPHAHPNHRHPTGNGPSGCPLLSDFGCNVPAPESHPASRFMTEWFAIRGGSSGSGLRLCSHTGCGRSETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKEGCAPVERWVD 378

HSP 2 Score: 138.658 bits (348), Expect = 1.866e-30
Identity = 69/91 (75.82%), Postives = 77/91 (84.62%), Query Frame = 1 
Query:   19 GVSDLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM 291
            G +DLF+SLPDDLV+SIL KLSS+A+ PSDFI VL+TCKRL  LGL S+VLSKAS KT +VKAKNW DSAHRFLK   DAGN EACYTLGM
Sbjct:   59 GETDLFDSLPDDLVISILCKLSSSASCPSDFINVLLTCKRLNGLGLHSLVLSKASPKTFAVKAKNWSDSAHRFLKLFADAGNVEACYTLGM 149
[Close]
BLAST of Ca_11349 vs. TrEMBL
Match: M0TWK5_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.731e-60
Identity = 133/271 (49.08%), Postives = 164/271 (60.52%), Query Frame = 1 
Query:   22 VSDLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM-------NVIEGRRFLVQ-------ANARELAAVLSNGN-----SKQPLLTWSINPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPE---------------AHPASKFMTEWFAIRG--GFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLD 726
            V DLF+ LPDDLV+SIL K+S++A SPSD I+++ITCKRLK LG + +VL+KAS ++L+V+AKNW +SAHRFLKRC DAGN EACY LGM       N   G   + +       A    LA +  NG+      K      ++         V A+   G  L   +G      E                HPA++FM EWFA RG  G    G+RLCSH GCGR ETR+HEFRRCSVCGAVNYCSRACQAL WK  HK +CAP++RWLD
Sbjct:   58 VPDLFDGLPDDLVVSILSKVSASAASPSDLISIMITCKRLKGLGSNPLVLAKASAQSLAVRAKNWSESAHRFLKRCADAGNLEACYILGMIRFYCLQNRGSGASLMARSAMGSHAAALYSLAVIQFNGSGGDKGDKDLHAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNVAEGRRFLVQANARELAAVHPANRFMVEWFAARGASGTGEEGLRLCSHGGCGRQETRRHEFRRCSVCGAVNYCSRACQALHWKLAHKADCAPMDRWLD 328
[Close]
BLAST of Ca_11349 vs. TrEMBL
Match: B9RME6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1080380 PE=4 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.731e-60
Identity = 116/166 (69.88%), Postives = 125/166 (75.30%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPLLTWSINPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWL 723
            A R L  C+  G     Y +  N+ EGRRFLVQANARELAAVLSN NS      W +N N       R  +G GCPLLSDFGCNVPAPEAHPAS+FM +WFA RGG PG G+RLCSH GCGRPETRKHEFRRCSVCGAVNYCSRACQALDWK RHK ECAPVERW+
Sbjct:  213 ALRELGHCLQDG-----YGVRQNIAEGRRFLVQANARELAAVLSNPNSDLNTRAW-VNWNPHAHSNHRHASGPGCPLLSDFGCNVPAPEAHPASRFMADWFATRGGSPGQGLRLCSHVGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKEECAPVERWV 372

HSP 2 Score: 134.806 bits (338), Expect = 2.695e-29
Identity = 69/97 (71.13%), Postives = 77/97 (79.38%), Query Frame = 1 
Query:    4 PEKPPG-VSDLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM 291
            PEK  G  +D F +LPDDLV  IL KLSS+A+ PSDF+ VL TCKRL  LGL+SIVLSKAS KT ++KAKNW DSAHRFLK C DAGN EACYTLGM
Sbjct:   51 PEKIAGDKTDFFYALPDDLVTCILCKLSSSASCPSDFVNVLATCKRLNGLGLNSIVLSKASPKTFALKAKNWSDSAHRFLKLCADAGNVEACYTLGM 147
[Close]
BLAST of Ca_11349 vs. TrEMBL
Match: M5XDI5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006570mg PE=4 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.465e-59
Identity = 115/173 (66.47%), Postives = 131/173 (75.72%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSN----GNSKQPLLTWSI--NPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLD 726
            A R L  C+  G     Y +  N+ EGRRFLVQANARELAAVLS+    G   + LLTW+   +P+  P PQ+  + GSGCPLLSDFGCNVPAPE HPA++F+ EWFA R G PG G+RLCSH GCGRPETR+HEFRRCSVCGAVNYCSRACQALDWK RHK ECA VERW+D
Sbjct:  216 ALRELGHCLQDG-----YGVRQNITEGRRFLVQANARELAAVLSSAAASGVPMRQLLTWTPLPHPHPHPHPQLGHLTGSGCPLLSDFGCNVPAPEMHPANRFLGEWFAAREGSPGPGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKAECAAVERWVD 383

HSP 2 Score: 134.035 bits (336), Expect = 4.597e-29
Identity = 65/88 (73.86%), Postives = 73/88 (82.95%), Query Frame = 1 
Query:   28 DLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM 291
            DLF+SLPDDL++ IL KLSSTANSPSDFI+  ITCKRL  L L S+V+SKAS KT  +KAKNW +SAHRFLK C DAGN EACYTLGM
Sbjct:   63 DLFDSLPDDLLILILSKLSSTANSPSDFISASITCKRLNGLALHSLVVSKASPKTFVLKAKNWSESAHRFLKLCADAGNVEACYTLGM 150
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BLAST of Ca_11349 vs. TrEMBL
Match: K4BYQ8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc05g015420.2 PE=4 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 4.263e-59
Identity = 115/170 (67.65%), Postives = 128/170 (75.29%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPL---LTWSINPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLD 726
            A R L  C+  G     Y +  N+ EGRRFLVQANARELAAVLS   S       LTW+      P P  R  AGSGCPLLSDFGCNVPAPEAHPA++F+TEWFA +GG PGSG+RLCSH+GCGRPE+R+HEFRRCSVCG VNYCSRACQALDWK RHK EC PVERW+D
Sbjct:  205 ALRELGHCLQDG-----YGVKQNIAEGRRFLVQANARELAAVLSMTPSALTAGGWLTWN------PLPHHRHGAGSGCPLLSDFGCNVPAPEAHPANQFLTEWFASKGGVPGSGLRLCSHAGCGRPESRRHEFRRCSVCGTVNYCSRACQALDWKMRHKAECTPVERWID 363
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BLAST of Ca_11349 vs. DB:Swiss
Match: FB76_ARATH (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 5.918e-70
Identity = 112/168 (66.67%), Postives = 129/168 (76.79%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPLLTWSINPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGG-FPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLD 726
            A R L  C+  G     Y +  NV EGRRFLVQANARELAAVLS+G   Q   TW ++ +QPP P V       CPLLSDFGCNVPAPE HPA++F+ +WFA+RGG  PG G+RLCSH+GCGRPETRKHEFRRCSVCG VNYCSRACQALDWK RHK++CAPV+RWL+
Sbjct:  195 ALRELGHCLQDG-----YGVPQNVSEGRRFLVQANARELAAVLSSG--IQARSTW-LSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLE 354

HSP 2 Score: 123.25 bits (308), Expect = 1.265e-31
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = 1 
Query:   25 SDLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM 291
            +DL +S+PDDLV+SIL KL ST+  P+DFI VL+TCKRLK L ++ IVLS+ S K ++VKA NW + +HRFLKRCVDAG+ EACYTLGM
Sbjct:   41 ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGM 129
[Close]
BLAST of Ca_11349 vs. DB:Swiss
Match: FB342_ARATH (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.286e-39
Identity = 77/166 (46.39%), Postives = 96/166 (57.83%), Query Frame = 1 
Query:  226 AHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPLLTWSINPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWL 723
            A R L  C+  G     Y +  +V EGRR L+QANARELA  L     +  L   S + N+                L+D    VP  E HP ++F+ EWF+        G+R+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALDW+ +HKVEC P++ W+
Sbjct:  173 ALRELGHCLQDG-----YGVPRDVSEGRRLLIQANARELACSL-----RSYLSLKSGDENET---------------LTDLSV-VPVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECTPLDLWV 312

HSP 2 Score: 114.39 bits (285), Expect = 1.363e-28
Identity = 54/86 (62.79%), Postives = 70/86 (81.40%), Query Frame = 1 
Query:   34 FESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGM 291
            FE L DDL++SIL KL+++A+SPSDF+TVL TCKRL  LGL  +VLSKA  +TL+V A+ W DS+H+FLK CV+AGN +A Y+LGM
Sbjct:   22 FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGM 107
The following BLAST results are available for this feature:
BLAST of Ca_11349 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
FB76_ARATH4.973e-5966.67F-box protein At1g67340 OS=Arabidopsis thaliana GN... [more]
FB342_ARATH3.589e-3345.78F-box protein At5g50450 OS=Arabidopsis thaliana GN... [more]
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BLAST of Ca_11349 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7JBZ1_MEDTR1.562e-6976.16F-box protein OS=Medicago truncatula GN=MTR_3g0853... [more]
K7LRZ7_SOYBN9.476e-6773.65Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1MYF3_SOYBN7.508e-6471.86Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9GML2_POPTR3.154e-6272.19Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
I1KS21_SOYBN4.120e-6270.06Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9GZP6_POPTR1.325e-6071.60Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
M0TWK5_MUSAM1.731e-6049.08Uncharacterized protein OS=Musa acuminata subsp. m... [more]
B9RME6_RICCO1.731e-6069.88Putative uncharacterized protein OS=Ricinus commun... [more]
M5XDI5_PRUPE1.465e-5966.47Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
K4BYQ8_SOLLC4.263e-5967.65Uncharacterized protein OS=Solanum lycopersicum GN... [more]

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BLAST of Ca_11349 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
FB76_ARATH5.918e-7066.67F-box protein At1g67340 OS=Arabidopsis thaliana OX... [more]
FB342_ARATH1.286e-3946.39F-box protein At5g50450 OS=Arabidopsis thaliana OX... [more]
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Expression

Available Analyses

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Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 194..234
score: 3.2
IPR002893Zinc finger, MYND-typePROFILEPS50865ZF_MYND_2coord: 192..234
score: 10
NoneNo IPR availablePANTHERPTHR12298FAMILY NOT NAMEDcoord: 101..248
score: 2.3
NoneNo IPR availableSEGsegsegcoord: 243..264
score
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 196..238
score: 4

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_11349_v1.0_kabuli ID=Ca_11349_v1.0_kabuli; Name=Ca_11349; organism=Cicer arietinum; type=mRNA; length=798bp
ATGCCGGAAAAACCACCCGGAGTTTCTGACTTGTTTGAATCTCTTCCCGA
TGACCTTGTCCTCTCTATCCTCGGAAAGCTTAGCTCCACCGCAAATTCTC
CCTCTGATTTCATCACTGTTTTAATCACGTGCAAAAGACTCAAATCTTTA
GGTCTTAGCTCTATTGTTTTGTCGAAAGCATCCAACAAAACATTATCAGT
TAAAGCTAAAAATTGGTGTGACTCTGCTCATCGATTTCTCAAACGATGTG
TTGATGCTGGAAACACTGAAGCGTGTTACACTCTCGGAATGAACGTTATT
GAAGGACGGCGGTTTTTAGTTCAAGCTAACGCCCGTGAACTAGCTGCCGT
TTTGTCTAACGGGAACAGTAAACAGCCGTTGCTTACGTGGAGCATTAACC
CGAACCAGCCACCTCAACCTCAGGTTCGGGCTATTGCTGGTTCGGGTTGT
CCGTTGCTAAGTGATTTTGGATGTAACGTTCCGGCTCCAGAGGCTCACCC
GGCTAGTAAGTTTATGACTGAGTGGTTTGCTATTCGAGGCGGGTTTCCGG
GTTCGGGTATGAGGTTATGTTCGCATTCGGGTTGCGGGCGACCCGAGACA
AGGAAGCACGAGTTTCGAAGGTGTTCGGTTTGTGGTGCGGTTAATTATTG
TTCACGCGCTTGTCAAGCGCTTGATTGGAAGTTTCGACATAAGGTGGAGT
GTGCGCCCGTAGAGAGGTGGTTAGATGAGGAGGTTAACGGCGCCGGTGAG
GTTAACGGCGCCGTTAACGTTGAAGAGGTTGTTGTGGTTAATAGATAG
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protein sequence of Ca_11349_v1.0_kabuli

>Ca_11349_v1.0_kabuli ID=Ca_11349_v1.0_kabuli; Name=Ca_11349_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=265bp
MPEKPPGVSDLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSL
GLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGMNVI
EGRRFLVQANARELAAVLSNGNSKQPLLTWSINPNQPPQPQVRAIAGSGC
PLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPET
RKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLDEEVNGAGE
VNGAVNVEEVVVVNR
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mRNA from alignment at Ca5:42647682..42649038+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_11349_v1.0_kabuli ID=Ca_11349_v1.0_kabuli; Name=Ca_11349; organism=Cicer arietinum; type=mRNA; length=1357bp; location=Sequence derived from: Ca5:42647682..42649038+ (Cicer arietinum
ATGCCGGAAAAACCACCCGGAGTTTCTGACTTGTTTGAATCTCTTCCCGA
TGACCTTGTCCTCTCTATCCTCGGAAAGCTTAGCTCCACCGCAAATTCTC
CCTCTGATTTCATCACTGTTTTAATCACGTATGTTTTCGACACAACAACC
TACAAATATGTGAAAATTTCTCATTTTGTTAAAATTCGTCCTTTTTGTTG
TTGTGGTAACTGATTTTTTGAAACTGAACAAAACAGGTGCAAAAGACTCA
AATCTTTAGGTCTTAGCTCTATTGTTTTGTCGAAAGCATCCAACAAAACA
TTATCAGTTAAAGCTAAAAATTGGTGTGACTCTGCTCATCGATTTCTCAA
ACGATGTGTTGATGCTGGAAACACTGAAGCGTGTTACACTCTCGGAATGG
TAAGAACTAAAAATAAAATTGTTATTTTAGTTTTTTTACCTGCATACAAA
CGAAAGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGGCCACATCGACG
GTTTACGTGAGCTAGGTCATTGTTTACAAGACGGTTACGGCGTTAAACAG
AACGTTATTGAAGGACGGCGGTTTTTAGTTCAAGCTAACGCCCGTGAACT
AGCTGCCGTTTTGTCTAACGGGAACAGTAAACAGCCGTTGCTTACGTGGA
GCATTAACCCGAACCAGCCACCTCAACCTCAGGTTCGGGCTATTGCTGGT
TCGGGTTGTCCGTTGCTAAGTGATTTTGGATGTAACGTTCCGGCTCCAGA
GGCTCACCCGGCTAGTAAGTTTATGACTGAGTGGTTTGCTATTCGAGGCG
GGTTTCCGGGTTCGGGTATGAGGTTATGTTCGCATTCGGGTTGCGGGCGA
CCCGAGACAAGGAAGCACGAGTTTCGAAGGTGTTCGGTTTGTGGTGCGGT
TAATTATTGTTCACGCGCTTGTCAAGCGCTTGATTGGAAGTTTCGACATA
AGGTGGAGTGTGCGCCCGTAGAGAGGTGGTTAGATGAGGAGGTTAACGGC
GCCGGTGAGGTTAACGGCGCCGTTAACGTTGAAGAGGTTGTTGTGGTTAA
TAGATAG
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Coding sequence (CDS) from alignment at Ca5:42647682..42649038+

>Ca_11349_v1.0_kabuli ID=Ca_11349_v1.0_kabuli; Name=Ca_11349; organism=Cicer arietinum; type=CDS; length=798bp; location=Sequence derived from: Ca5:42647682..42649038+ (Cicer arietinum
ATGCCGGAAAAACCACCCGGAGTTTCTGACTTGTTTGAATCTCTTCCCGA
TGACCTTGTCCTCTCTATCCTCGGAAAGCTTAGCTCCACCGCAAATTCTC
CCTCTGATTTCATCACTGTTTTAATCACGTGCAAAAGACTCAAATCTTTA
GGTCTTAGCTCTATTGTTTTGTCGAAAGCATCCAACAAAACATTATCAGT
TAAAGCTAAAAATTGGTGTGACTCTGCTCATCGATTTCTCAAACGATGTG
TTGATGCTGGAAACACTGAAGCGTGTTACACTCTCGGAATGAACGTTATT
GAAGGACGGCGGTTTTTAGTTCAAGCTAACGCCCGTGAACTAGCTGCCGT
TTTGTCTAACGGGAACAGTAAACAGCCGTTGCTTACGTGGAGCATTAACC
CGAACCAGCCACCTCAACCTCAGGTTCGGGCTATTGCTGGTTCGGGTTGT
CCGTTGCTAAGTGATTTTGGATGTAACGTTCCGGCTCCAGAGGCTCACCC
GGCTAGTAAGTTTATGACTGAGTGGTTTGCTATTCGAGGCGGGTTTCCGG
GTTCGGGTATGAGGTTATGTTCGCATTCGGGTTGCGGGCGACCCGAGACA
AGGAAGCACGAGTTTCGAAGGTGTTCGGTTTGTGGTGCGGTTAATTATTG
TTCACGCGCTTGTCAAGCGCTTGATTGGAAGTTTCGACATAAGGTGGAGT
GTGCGCCCGTAGAGAGGTGGTTAGATGAGGAGGTTAACGGCGCCGGTGAG
GTTAACGGCGCCGTTAACGTTGAAGAGGTTGTTGTGGTTAATAGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding