Ca_12690, Ca_12690_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_12690 vs. TrEMBL
Match: G7J3T5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g087360 PE=4 SV=1) HSP 1 Score: 438.343 bits (1126), Expect = 2.568e-120 Identity = 218/260 (83.85%), Postives = 230/260 (88.46%), Query Frame = 1 Query: 535 QEESKKANK---QKQTPPSNWFFDEEDADFVSEFKDLPIKFQQTLLPDLERISTTSKAYLTKANKEITNNFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFFILCLSSLVTGLEPLRFFYSTSQSTYVCLQIIQTXXXXXXXXXXXXXXXXXFSTDCGLGSKLLGLAQMFVGFAVGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFVICILARAERRKKTYLEEGGDEGKKN 1305 Q SKK NK K+T PSNWFFDEED DFVS+FKDLPIKFQQTL+PDLE+ISTTSKAY+TKANKEIT NFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYF ILC SSL+TGLEPL+FFYSTSQSTY+ LQIIQT FSTDCGLGSKLLGLAQMFVGF+VGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFF+IC+LARAERRKKTYLEEGG+EGKKN Sbjct: 188 QSSSKKPNKLNNNKKTQPSNWFFDEEDMDFVSDFKDLPIKFQQTLIPDLEKISTTSKAYITKANKEITKNFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFSILCFSSLITGLEPLKFFYSTSQSTYLILQIIQTLAYFLYLMMLLMYLVLVFSTDCGLGSKLLGLAQMFVGFSVGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFMICVLARAERRKKTYLEEGGEEGKKN 447
BLAST of Ca_12690 vs. TrEMBL
Match: I1MYS9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 2.111e-106 Identity = 196/265 (73.96%), Postives = 220/265 (83.02%), Query Frame = 1 Query: 532 DQEESKKAN-------KQKQTPPSNWFFDEEDADFVSEFKDLPIKFQQTLLPDLERISTTSKAYLTKANKEITNNFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFFILCLSSLVTGLEPLRFFYSTSQSTYVCLQIIQTXXXXXXXXXXXXXXXXXFSTDCGLGSKLLGLAQMFVGFAVGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFVICILARAERRKKTYLEEGGDEGKKN 1305 D++ +KK+N K++Q PS F DE D D VSEFKDLP+KFQQTL+PDLERISTTSKAY+TKANKEIT FKPYVGNKYAPTI TLLSCA LIPLLLASLLFNKIKAYFSLQKLLIFIQAYL+IYF ILCLSS VTGLEPLRFFYS S+STY+CLQ++QT FSTD GLGSK LGLAQ FVGF+VGLHYY+TVFH+VVL+QPPKTNWKIH IYATCFF+IC++ARA+R+KKTYLEEGG+EGKKN Sbjct: 187 DKQSNKKSNTTNNKKKKEQQGQPSWVFEDEVDDDLVSEFKDLPMKFQQTLIPDLERISTTSKAYITKANKEITRGFKPYVGNKYAPTITTLLSCAFALIPLLLASLLFNKIKAYFSLQKLLIFIQAYLAIYFSILCLSSFVTGLEPLRFFYSASRSTYLCLQVLQTLAYVLYLLLLLMYLVLVFSTDSGLGSKFLGLAQTFVGFSVGLHYYVTVFHRVVLKQPPKTNWKIHAIYATCFFLICVIARADRKKKTYLEEGGEEGKKN 451
BLAST of Ca_12690 vs. TrEMBL
Match: I1LNL3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 391.349 bits (1004), Expect = 3.600e-106 Identity = 197/260 (75.77%), Postives = 217/260 (83.46%), Query Frame = 1 Query: 538 EESKKAN----KQKQTPPSNWFFDEEDADFVSEFKDLPIKFQQTLLPDLERISTTSKAYLTKANKEITNNFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFFILCLSSLVTGLEPLRFFYSTSQSTYVCLQIIQTXXXXXXXXXXXXXXXXXFSTDCGLGSKLLGLAQMFVGFAVGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFVICILARAERRKKTYLEEGGDEGKKN 1305 ++SKK N KQ+Q PS F DE D D VSEFKDLP+KFQQTL+PDLERISTTSKAY+TKANKEIT FKPYVGNKYAPTI TLLSCA LIPLLL SLLFNKIKAYFSLQKLLIFIQAYL+IYF ILCLSS VTGLEPLRFFYSTS+STY+ LQ++QT FSTD GLGSK LGLAQ FVGFA+GLHYY+TVFH+VVL+QPPKTNWKIH IYATCFF+IC++ARA+RRKKTYLEEGG+EGKKN Sbjct: 193 KQSKKTNNNNKKQQQGQPSWVFEDEVDDDLVSEFKDLPMKFQQTLIPDLERISTTSKAYITKANKEITRGFKPYVGNKYAPTITTLLSCAFALIPLLLVSLLFNKIKAYFSLQKLLIFIQAYLAIYFTILCLSSFVTGLEPLRFFYSTSRSTYLSLQVLQTLAYVLYLLLLLMYLVLVFSTDSGLGSKFLGLAQTFVGFAIGLHYYVTVFHRVVLKQPPKTNWKIHAIYATCFFLICVIARADRRKKTYLEEGGEEGKKN 452
BLAST of Ca_12690 vs. TrEMBL
Match: M5VY69_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005824mg PE=4 SV=1) HSP 1 Score: 369.777 bits (948), Expect = 1.122e-99 Identity = 182/255 (71.37%), Postives = 207/255 (81.18%), Query Frame = 1 Query: 547 KKANKQKQTPP--SNWFFDEEDADFVSEFKDLPIKFQQTLLPDLERISTTSKAYLTKANKEITNNFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFFILCLSSLVTGLEPLRFFYSTSQSTYVCLQIIQTXXXXXXXXXXXXXXXXXFSTDCGLGSKLLGLAQMFVGFAVGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFVICILARAERRKKTYLEEGGDEGKKN 1305 KK +QK P +W E+D DFVS+F DLP KFQQTL+PDLERISTTSK YL KANK++TN FKP VGNKYA TIA+++SCA +LIPLLL SLLFN+IKAYFSLQKLLIFIQ YLSIYF ILCLSSLVTGLEPL+FFY+TSQSTYVCLQ++QT FSTD GLGSK+LGL Q FVGF+VGLHYYM+VFH+ VLRQPPKTNWK+HGIYATC+ VIC+ A AERRKK YLEEGG+EGKK+ Sbjct: 188 KKPTQQKPKKPIEPSWIDQEDDTDFVSDFTDLPGKFQQTLIPDLERISTTSKIYLNKANKQMTNQFKPIVGNKYAATIASIVSCAFLLIPLLLVSLLFNRIKAYFSLQKLLIFIQVYLSIYFSILCLSSLVTGLEPLKFFYATSQSTYVCLQVLQTLGYVLYLLLLLMYLILVFSTDSGLGSKMLGLGQTFVGFSVGLHYYMSVFHRAVLRQPPKTNWKVHGIYATCYLVICLFATAERRKKAYLEEGGEEGKKS 442
BLAST of Ca_12690 vs. TrEMBL
Match: D7M962_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490769 PE=4 SV=1) HSP 1 Score: 369.392 bits (947), Expect = 1.465e-99 Identity = 179/254 (70.47%), Postives = 206/254 (81.10%), Query Frame = 1 Query: 544 SKKANKQKQTPPSNWFFDEEDADFVSEFKDLPIKFQQTLLPDLERISTTSKAYLTKANKEITNNFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFFILCLSSLVTGLEPLRFFYSTSQSTYVCLQIIQTXXXXXXXXXXXXXXXXXFSTDCGLGSKLLGLAQMFVGFAVGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFVICILARAERRKKTYLEEGGDEGKKN 1305 +K +K+ P W DEED DFVSEF+DLP KFQ++L+PDLERISTTSK Y+ KANKEIT NFKPY GNKYAPTIA+++S +L+PLLL SL+FN+ KAYFSLQK+LIFIQ YLSIYF ILCLSSLVTG+EPL+F Y+TS STYVCLQI+QT FSTDCGLG K+LGLAQ FVGFAVGLHYY+ VFH+VVLRQPPKTNWKIHG+YATCF +IC+L+ AERRKK YLEEGGDEGKKN Sbjct: 197 TKSKQPEKEIKPF-WLDDEEDEDFVSEFRDLPTKFQRSLIPDLERISTTSKNYINKANKEITKNFKPYFGNKYAPTIASVVSFVFILVPLLLVSLIFNRFKAYFSLQKILIFIQIYLSIYFSILCLSSLVTGIEPLKFLYATSSSTYVCLQILQTLGYVFYLLLLLMYLVLVFSTDCGLGLKVLGLAQTFVGFAVGLHYYVAVFHRVVLRQPPKTNWKIHGVYATCFLLICLLSNAERRKKEYLEEGGDEGKKN 449
BLAST of Ca_12690 vs. TrEMBL
Match: Q9SMR9_ARATH (Putative uncharacterized protein AT4g39840 OS=Arabidopsis thaliana GN=T5J17.10 PE=2 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 1.913e-99 Identity = 180/260 (69.23%), Postives = 207/260 (79.62%), Query Frame = 1 Query: 535 QEESKKANKQKQTPPSN---WFFDEEDADFVSEFKDLPIKFQQTLLPDLERISTTSKAYLTKANKEITNNFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFFILCLSSLVTGLEPLRFFYSTSQSTYVCLQIIQTXXXXXXXXXXXXXXXXXFSTDCGLGSKLLGLAQMFVGFAVGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFVICILARAERRKKTYLEEGGDEGKKN 1305 Q SK K KQ+ W DEED DFVSEF+DLP +FQ++L+PDLERISTTSK Y+ KANK+IT NFKPY GNKYAPTIA+++S +L+PLLL SL+FN+ KAYFSLQK+LIFIQ YLSIYF ILCLSSLVTG+EPL+F Y+TS STYVCLQI+QT FSTDCGLG K+LGLAQ FVGFAVGLHYY+ VFH+VVLRQPPKTNWKIHG+YATCF +IC+L+ AERRKK YLEEGGDEGKKN Sbjct: 192 QPSSKPVTKSKQSEKEIKPFWLDDEEDEDFVSEFRDLPTRFQRSLIPDLERISTTSKNYINKANKQITKNFKPYFGNKYAPTIASVVSFVFILVPLLLVSLIFNRFKAYFSLQKILIFIQIYLSIYFSILCLSSLVTGIEPLKFLYATSSSTYVCLQILQTLGYVFYLLLLLMYLVLVFSTDCGLGLKVLGLAQTFVGFAVGLHYYVAVFHRVVLRQPPKTNWKIHGVYATCFLLICLLSNAERRKKEYLEEGGDEGKKN 451
BLAST of Ca_12690 vs. TrEMBL
Match: R0GZL0_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10004748mg PE=4 SV=1) HSP 1 Score: 366.311 bits (939), Expect = 1.240e-98 Identity = 175/240 (72.92%), Postives = 200/240 (83.33%), Query Frame = 1 Query: 586 WFFDEEDADFVSEFKDLPIKFQQTLLPDLERISTTSKAYLTKANKEITNNFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFFILCLSSLVTGLEPLRFFYSTSQSTYVCLQIIQTXXXXXXXXXXXXXXXXXFSTDCGLGSKLLGLAQMFVGFAVGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFVICILARAERRKKTYLEEGGDEGKKN 1305 W DEED DFVSEF+DLP KFQ++L+PDLERISTTSK Y+ KANKEIT NFKPY GNKYAPTIA+++S +L+PLLL SL+FN+ KAYFSLQK+LIFIQ YLSIYF ILCLSSLVTG+EPL+F Y+TS +TYVCLQI+QT FSTDCGLG K+LGLAQ FVGFAVGLHYY+ VFH+VVLRQPPKTNWKIHG+YATCF +IC+L+ AERRKK YLEEGGDEGKKN Sbjct: 226 WLDDEEDEDFVSEFRDLPTKFQRSLIPDLERISTTSKNYINKANKEITKNFKPYFGNKYAPTIASVVSFVFILVPLLLVSLIFNRFKAYFSLQKILIFIQIYLSIYFSILCLSSLVTGIEPLKFLYATSSTTYVCLQILQTLGYVFYLLLLLMYLVLVFSTDCGLGLKVLGLAQTFVGFAVGLHYYVAVFHRVVLRQPPKTNWKIHGVYATCFLLICLLSSAERRKKEYLEEGGDEGKKN 465
BLAST of Ca_12690 vs. TrEMBL
Match: I1K4J9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 2.339e-97 Identity = 181/260 (69.62%), Postives = 206/260 (79.23%), Query Frame = 1 Query: 535 QEESKKANKQKQTPPSNWFFDE---EDADFVSEFKDLPIKFQQTLLPDLERISTTSKAYLTKANKEITNNFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFFILCLSSLVTGLEPLRFFYSTSQSTYVCLQIIQTXXXXXXXXXXXXXXXXXFSTDCGLGSKLLGLAQMFVGFAVGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFVICILARAERRKKTYLEEGGDEGKKN 1305 Q+ KK KQK PPS W +E ED D VSEF DLP KF +TLLPDLERISTTSKAY+TKAN E+T FKPYVG KYAPT+AT++SCA +LIPLLL SLL +IKAYFSLQK+LIFIQ YLSIYF ILC++S TG EPLRF YSTSQSTY+CLQ++QT FSTDCGL SK LGLAQ+FVGFAVGLHYY+TVFH+VVL+QPPKTNWKIH IYATCF +IC+LA A+RRKKTY+E+GG EGKKN Sbjct: 220 QQTQKKPTKQK-APPS-WIMEELEEEDDDLVSEFTDLPNKFHRTLLPDLERISTTSKAYITKANNEMTKGFKPYVGKKYAPTLATIISCAFILIPLLLVSLLCTRIKAYFSLQKILIFIQIYLSIYFTILCVTSFFTGFEPLRFLYSTSQSTYLCLQVLQTLAYVFYLLLLLMYLVLLFSTDCGLASKFLGLAQVFVGFAVGLHYYVTVFHRVVLQQPPKTNWKIHAIYATCFLLICVLAGADRRKKTYVEDGGGEGKKN 477
BLAST of Ca_12690 vs. TrEMBL
Match: I1KT32_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 358.992 bits (920), Expect = 1.980e-96 Identity = 177/258 (68.60%), Postives = 204/258 (79.07%), Query Frame = 1 Query: 538 EESKKANKQKQTPPSNWFF--DEEDADFVSEFKDLPIKFQQTLLPDLERISTTSKAYLTKANKEITNNFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFFILCLSSLVTGLEPLRFFYSTSQSTYVCLQIIQTXXXXXXXXXXXXXXXXXFSTDCGLGSKLLGLAQMFVGFAVGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFVICILARAERRKKTYLEEGGDEGKKN 1305 +++KK KQ PPS W DE++ D VSE DLP KF +TLLPDLERISTTSKAY+TKAN EIT FKPYVG KYAPT+AT++S A +LIPLLL SLL +IKAYFSLQK+LIFIQ YLS YF ILC++S TG EPLRF YSTSQSTY+CLQ++QT FSTDCGLGSK LGLAQ+FVGFAVGLHYY+TVFH+VVL+QPPKTNWKIH IYATCF +IC+LARA+RRKK Y+E+GG EGKKN Sbjct: 183 QQTKKKPAPKQAPPS-WIVEEDEDEYDLVSELTDLPNKFHRTLLPDLERISTTSKAYITKANSEITKGFKPYVGKKYAPTVATIISSAFILIPLLLVSLLCTRIKAYFSLQKILIFIQVYLSFYFTILCVTSFFTGFEPLRFLYSTSQSTYLCLQVLQTLAYVFYLLLLLMYLVLVFSTDCGLGSKFLGLAQVFVGFAVGLHYYVTVFHRVVLQQPPKTNWKIHAIYATCFLLICVLARADRRKKNYVEDGGGEGKKN 439
BLAST of Ca_12690 vs. TrEMBL
Match: M4D5S1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra011828 PE=4 SV=1) HSP 1 Score: 356.681 bits (914), Expect = 9.827e-96 Identity = 169/240 (70.42%), Postives = 199/240 (82.92%), Query Frame = 1 Query: 586 WFFDEEDADFVSEFKDLPIKFQQTLLPDLERISTTSKAYLTKANKEITNNFKPYVGNKYAPTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFFILCLSSLVTGLEPLRFFYSTSQSTYVCLQIIQTXXXXXXXXXXXXXXXXXFSTDCGLGSKLLGLAQMFVGFAVGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFVICILARAERRKKTYLEEGGDEGKKN 1305 W DEED DFVSEF+DLP +FQ++L+PDLERIS TSK+Y+ KANKEIT NFKPY GNKY+ TIA+++S +L+PLLL SL+FN+ KAYFSLQKLLIFIQ YLSIYF ILCLSSLVTG+EPL+F Y+TS STYVCLQI+QT FSTDCGLG ++LGLAQ FVGFAVGLHYY+ VFH+VVLRQPPKTNWK+HG+YATCF +IC+L+ AERRKK YLE+GG+EGKKN Sbjct: 221 WLDDEEDEDFVSEFRDLPTRFQRSLIPDLERISATSKSYINKANKEITKNFKPYFGNKYSQTIASVVSFVFILVPLLLVSLVFNRFKAYFSLQKLLIFIQIYLSIYFSILCLSSLVTGVEPLKFLYATSSSTYVCLQIMQTLGYVFYLLLLLMYLVLVFSTDCGLGLRVLGLAQTFVGFAVGLHYYVAVFHRVVLRQPPKTNWKVHGVYATCFLLICLLSSAERRKKEYLEDGGEEGKKN 460 The following BLAST results are available for this feature:
BLAST of Ca_12690 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_12690 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_12690_v1.0_kabuli ID=Ca_12690_v1.0_kabuli; Name=Ca_12690; organism=Cicer arietinum; type=mRNA; length=1308bpback to top protein sequence of Ca_12690_v1.0_kabuli >Ca_12690_v1.0_kabuli ID=Ca_12690_v1.0_kabuli; Name=Ca_12690_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=435bpback to top mRNA from alignment at Ca5:43584740..43586047- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_12690_v1.0_kabuli ID=Ca_12690_v1.0_kabuli; Name=Ca_12690; organism=Cicer arietinum; type=mRNA; length=1308bp; location=Sequence derived from: Ca5:43584740..43586047- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:43584740..43586047- >Ca_12690_v1.0_kabuli ID=Ca_12690_v1.0_kabuli; Name=Ca_12690; organism=Cicer arietinum; type=CDS; length=1308bp; location=Sequence derived from: Ca5:43584740..43586047- (Cicer arietinumback to top |