Ca_06383, Ca_06383_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_06383 vs. TrEMBL
Match: I3SIF1_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 1.495e-62 Identity = 121/136 (88.97%), Postives = 129/136 (94.85%), Query Frame = 1 Query: 1 MEVERSEGTADSSQPMKLLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQKSLDIEKVKSVFPYGKILNVEVVDGGLLCSSGVLVEEMGDKNDDCYIVNAAVYVGY 408 MEVERS+ + +SS MKLLFVEMGVGYDQHGQNIT+AAMRACRDAISSNSIPAFRRGSIPGVSF+QMKLQIK GVPHSLQKSLDIEKVKSVFPYGKILNV++VDGGL+ SSGV VEEMGDKNDDCYIVNAAVYVGY Sbjct: 59 MEVERSDDSTESSSAMKLLFVEMGVGYDQHGQNITAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLQIKPGVPHSLQKSLDIEKVKSVFPYGKILNVDIVDGGLIYSSGVHVEEMGDKNDDCYIVNAAVYVGY 194
BLAST of Ca_06383 vs. TrEMBL
Match: G7JPN5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g087740 PE=4 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.952e-62 Identity = 123/139 (88.49%), Postives = 129/139 (92.81%), Query Frame = 1 Query: 1 MEVERSEGTADSSQPMK---LLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQKSLDIEKVKSVFPYGKILNVEVVDGGLLCSSGVLVEEMGDKNDDCYIVNAAVYVGY 408 ME E+SEG+ DSS LLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSF QMKLQIKLGVPHSLQ++LDIEKVKSVFPYGKILNVEVVDGGL+CSSGVLVEEMGDKN+DCYIVNAAVYVGY Sbjct: 1 MEAEQSEGSTDSSSSQTMNHLLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFGQMKLQIKLGVPHSLQQALDIEKVKSVFPYGKILNVEVVDGGLICSSGVLVEEMGDKNEDCYIVNAAVYVGY 139
BLAST of Ca_06383 vs. TrEMBL
Match: C6T3H4_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 9.688e-62 Identity = 123/135 (91.11%), Postives = 127/135 (94.07%), Query Frame = 1 Query: 7 VERSEGTADSSQP-MKLLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQKSLDIEKVKSVFPYGKILNVEVVDGGLLCSSGVLVEEMGDKNDDCYIVNAAVYVGY 408 VE SE + SS P MKLLFVEMGVGYDQHGQ+IT AAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQ SLDIEKVKSVFPYG+ILNVEVVDGGL+CSSGVLVEEMGDKNDDCYIVNAAVYVGY Sbjct: 54 VEGSEESKGSSSPLMKLLFVEMGVGYDQHGQDITVAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQNSLDIEKVKSVFPYGEILNVEVVDGGLICSSGVLVEEMGDKNDDCYIVNAAVYVGY 188
BLAST of Ca_06383 vs. TrEMBL
Match: G7JPN4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g087740 PE=4 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 6.280e-61 Identity = 121/137 (88.32%), Postives = 127/137 (92.70%), Query Frame = 1 Query: 1 MEVERSEGTADSSQPMK---LLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQKSLDIEKVKSVFPYGKILNVEVVDGGLLCSSGVLVEEMGDKNDDCYIVNAAVYV 402 ME E+SEG+ DSS LLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSF QMKLQIKLGVPHSLQ++LDIEKVKSVFPYGKILNVEVVDGGL+CSSGVLVEEMGDKN+DCYIVNAAVYV Sbjct: 1 MEAEQSEGSTDSSSSQTMNHLLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFGQMKLQIKLGVPHSLQQALDIEKVKSVFPYGKILNVEVVDGGLICSSGVLVEEMGDKNEDCYIVNAAVYV 137
BLAST of Ca_06383 vs. TrEMBL
Match: G7JPN3_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_4g087740 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.399e-60 Identity = 120/137 (87.59%), Postives = 127/137 (92.70%), Query Frame = 1 Query: 1 MEVERSEGTADSSQPMK---LLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQKSLDIEKVKSVFPYGKILNVEVVDGGLLCSSGVLVEEMGDKNDDCYIVNAAVYV 402 ME E+SEG+ DSS LLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSF QMKLQIKLGVPHSLQ++LDIEKVKSVFPYGKILNVEVVDGGL+CSSGVLVEEMGDKN+DCYIVNAAVY+ Sbjct: 1 MEAEQSEGSTDSSSSQTMNHLLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFGQMKLQIKLGVPHSLQQALDIEKVKSVFPYGKILNVEVVDGGLICSSGVLVEEMGDKNEDCYIVNAAVYL 137
BLAST of Ca_06383 vs. TrEMBL
Match: F6HM84_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g01060 PE=4 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 6.943e-60 Identity = 118/140 (84.29%), Postives = 127/140 (90.71%), Query Frame = 1 Query: 1 MEVERSEGTAD----SSQPMKLLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQKSLDIEKVKSVFPYGKILNVEVVDGGLLCSSGVLVEEMGDKNDDCYIVNAAVYVGY 408 ME E+S GTA S+Q MKLLFVEMGVGYDQHGQ++T+AAMRACRDAISSNSIPAFRRGSIPGV+FDQMKLQIKLGVP LQ SLDIE+VKSVFPYGKI+N EVVDGGL+CSSGV VEEMGDKNDDCYIVNAAVYVGY Sbjct: 1 MEAEQSGGTASIESGSAQSMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVTFDQMKLQIKLGVPRPLQHSLDIERVKSVFPYGKIINFEVVDGGLICSSGVQVEEMGDKNDDCYIVNAAVYVGY 140
BLAST of Ca_06383 vs. TrEMBL
Match: G7JPN6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g087750 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 4.500e-59 Identity = 118/134 (88.06%), Postives = 125/134 (93.28%), Query Frame = 1 Query: 10 ERSEGTADSSQPMK-LLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQKSLDIEKVKSVFPYGKILNVEVVDGGLLCSSGVLVEEMGDKNDDCYIVNAAVYVGY 408 ERSEG+ DSS PM LLFVEMGVGYDQHGQ+IT+AA RACRDAI+SNSIPAFRRGSIPGVSF+QMKLQIKLGVP SLQKSLDIEKVKSVFPYGKILNVEVVDGGL+ SSGV VEEMGDK D+CYIVNAAVYVGY Sbjct: 54 ERSEGSTDSSPPMNHLLFVEMGVGYDQHGQDITAAATRACRDAITSNSIPAFRRGSIPGVSFEQMKLQIKLGVPRSLQKSLDIEKVKSVFPYGKILNVEVVDGGLISSSGVHVEEMGDKTDECYIVNAAVYVGY 187
BLAST of Ca_06383 vs. TrEMBL
Match: I3SB89_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 1.309e-58 Identity = 117/134 (87.31%), Postives = 125/134 (93.28%), Query Frame = 1 Query: 10 ERSEGTADSSQPMK-LLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQKSLDIEKVKSVFPYGKILNVEVVDGGLLCSSGVLVEEMGDKNDDCYIVNAAVYVGY 408 ERSEG+ DSS PM LLFVEMGVGYDQHGQ+IT+AA RACRDAI+SNSIPAFRRGSIPGVSF+QMKLQIKLGVP SLQKSLDIE+VKSVFPYGKILNVEVVDGGL+ SSGV VEEMGDK D+CYIVNAAVYVGY Sbjct: 54 ERSEGSTDSSPPMNHLLFVEMGVGYDQHGQDITAAATRACRDAITSNSIPAFRRGSIPGVSFEQMKLQIKLGVPRSLQKSLDIEEVKSVFPYGKILNVEVVDGGLISSSGVHVEEMGDKTDECYIVNAAVYVGY 187
BLAST of Ca_06383 vs. TrEMBL
Match: M5WHV9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011813mg PE=4 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 2.233e-58 Identity = 111/136 (81.62%), Postives = 127/136 (93.38%), Query Frame = 1 Query: 1 MEVERSEGTADSSQPMKLLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQKSLDIEKVKSVFPYGKILNVEVVDGGLLCSSGVLVEEMGDKNDDCYIVNAAVYVGY 408 ME ++SE T S+ PMKLLFVEMGVGYDQHGQ++T+A+MRACRDAISSNSIPAFRRGSIPGV+F++MKL+IKLGVPH LQ SLD+E+VKSVFPYGKI+ VEVVDGGL+CSSGV VEEMGDKNDDCYIVNAAVY+GY Sbjct: 60 MEAQQSE-TGVSTPPMKLLFVEMGVGYDQHGQDVTAASMRACRDAISSNSIPAFRRGSIPGVTFEEMKLEIKLGVPHLLQPSLDVERVKSVFPYGKIVKVEVVDGGLICSSGVCVEEMGDKNDDCYIVNAAVYIGY 194
BLAST of Ca_06383 vs. TrEMBL
Match: B9I1N3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728220 PE=4 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 2.233e-58 Identity = 117/139 (84.17%), Postives = 128/139 (92.09%), Query Frame = 1 Query: 1 MEVERSEGTA---DSSQPMKLLFVEMGVGYDQHGQNITSAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKLQIKLGVPHSLQKSLDIEKVKSVFPYGKILNVEVVDGGLLCSSGVLVEEMGDKNDDCYIVNAAVYVGY 408 ME E+S GTA S+ MKLLFVEMGVGYDQHGQ+IT+AAMRACRDAISSNSIPAFRRGSIPGV+F QMKLQIKLGVPHSLQ+SLDIE+VKSVFPYG+I+ EVVDGG++CSSGVLVEEMGDKNDDCYIVNAAVYVGY Sbjct: 1 MEAEQS-GTAVNPSSNASMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRGSIPGVTFGQMKLQIKLGVPHSLQQSLDIERVKSVFPYGEIVKFEVVDGGMICSSGVLVEEMGDKNDDCYIVNAAVYVGY 138 The following BLAST results are available for this feature:
BLAST of Ca_06383 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_06383 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_06383_v1.0_kabuli ID=Ca_06383_v1.0_kabuli; Name=Ca_06383; organism=Cicer arietinum; type=mRNA; length=411bpback to top protein sequence of Ca_06383_v1.0_kabuli >Ca_06383_v1.0_kabuli ID=Ca_06383_v1.0_kabuli; Name=Ca_06383_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=136bpback to top mRNA from alignment at Ca6:17659043..17660559+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_06383_v1.0_kabuli ID=Ca_06383_v1.0_kabuli; Name=Ca_06383; organism=Cicer arietinum; type=mRNA; length=1517bp; location=Sequence derived from: Ca6:17659043..17660559+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca6:17659043..17660559+ >Ca_06383_v1.0_kabuli ID=Ca_06383_v1.0_kabuli; Name=Ca_06383; organism=Cicer arietinum; type=CDS; length=411bp; location=Sequence derived from: Ca6:17659043..17660559+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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