Ca_11242, Ca_11242_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_11242 vs. TrEMBL
Match: G7JTT3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g078310 PE=4 SV=1) HSP 1 Score: 398.282 bits (1022), Expect = 1.616e-108 Identity = 207/297 (69.70%), Postives = 226/297 (76.09%), Query Frame = 1 Query: 1 MDIELSITPAAAHRTSDEVIFADTVFGFWEEFQXXXXXXXXXXXXXXXXXXXXXXXXXXXCPIEKNKTFWEEQDQLLKATLCRSSSRETKIRQATKEALKELNMSEMLCMCRRPVVEAKSCRNCLRREICKRLSNLGYXXXXXXXXXXXXXEIPSGEHTYLEVTENSSNIKRGVIKVVIELNFRAEFEMARGNEEYNQLVKRLPEVFVGKAERLRVFVKIMCSAAKKCMKEKKLHLGPWRKQKYMLAKWDGKCDTSLLEPLPTLCSTRPRKPKASMLTFDL-LENIVAHHCTAVQVI 888 M ELS TPAA +R+SDEV FADTVFGFWEEFQ C IEKNK FWEEQDQLLKATLCR+SS ETK+RQATKEA++E+NMSEMLC+CR+PVV SCR CL EIC RL NLG+ EIPSGEHTYLEVTENSS K GVIKV+IELNFR EFEMARGNEEYNQLVKRLPE+FVGKAERLRV VKIMCSAAKKCMKEKKLHLGPWRKQKYM AKW+GKCD +LEPLP + STR KPKAS+LTFDL +ENIV HCTAV+V+ Sbjct: 1 MGKELSATPAATYRSSDEVSFADTVFGFWEEFQDSSENSSNSGNDEEIDDEEDEDSV---CTIEKNKAFWEEQDQLLKATLCRTSSGETKVRQATKEAMREINMSEMLCLCRQPVV---SCRKCLLTEICDRLVNLGFNSAICKSKWKSSSEIPSGEHTYLEVTENSSKAKGGVIKVIIELNFRGEFEMARGNEEYNQLVKRLPEIFVGKAERLRVLVKIMCSAAKKCMKEKKLHLGPWRKQKYMQAKWNGKCD-KILEPLPIVYSTRSTKPKASLLTFDLMIENIVGRHCTAVEVV 290
BLAST of Ca_11242 vs. TrEMBL
Match: I3RZW3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 360.533 bits (924), Expect = 3.735e-97 Identity = 189/294 (64.29%), Postives = 211/294 (71.77%), Query Frame = 1 Query: 13 LSITPAAAHRTSDEVIFADTVFGFWEEFQXXXXXXXXXXXXXXXXXXXXXXXXXXXCPIEKNKTFWEEQDQLLKATLCRSSSRETKIRQATKEALKELNMSEMLCMCRRPVVEAKSCRNCLRREICKRLSNLGYXXXXXXXXXXXXXEIPSGEHTYLEVTENSSNIKRGVIKVVIELNFRAEFEMARGNEEYNQLVKRLPEVFVGKAERLRVFVKIMCSAAKKCMKEKKLHLGPWRKQKYMLAKWDGKC-DTSLLEPLPTLCSTRPRKPKASMLTFDLLENIVAHHC-TAVQVI 888 +S PAA +SDEV FADTVFGFWE+ C +EKNK FWEEQ+QLLKATLCR+SSRE KIRQA KEAL ELN SE+LC CRRPV +SCR+CLRRE+C RL NLGY EIPSGEHTYLEVTENSSN KRGV+KVVIELNFRAEFEMAR NEEY QL +LPEVFVGK+ERLR VKIMCSAAKKCMKEKK+HL PWRKQKYM AKW G C D S++EPLP + +TR +PKASMLT DLL+NI HC AV+V+ Sbjct: 6 ISTIPAATGWSSDEVSFADTVFGFWEDAHVLVPPGNSSDSSNDELDYNDEEEDGSFCNLEKNKAFWEEQEQLLKATLCRTSSREMKIRQAVKEALGELNTSELLCFCRRPVA-TRSCRDCLRREMCDRLLNLGYNCVICKSKWRSSSEIPSGEHTYLEVTENSSNAKRGVVKVVIELNFRAEFEMARANEEYFQLATKLPEVFVGKSERLRAVVKIMCSAAKKCMKEKKMHLAPWRKQKYMQAKWLGTCLDRSIVEPLPMVDTTRGARPKASMLTCDLLDNISGLHCRNAVEVV 298
BLAST of Ca_11242 vs. TrEMBL
Match: I1LS37_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 2.195e-89 Identity = 179/298 (60.07%), Postives = 203/298 (68.12%), Query Frame = 1 Query: 1 MDIELSITPAAAHRTSDEVIFADTVFGFWEEFQXXXXXXXXXXXXXXXXXXXXXXXXXXXCPIEKNKTFWEEQDQLLKATLCRSSSRETKIRQATKEALKELNMSEMLCMCRRPVVEAKSCRNCLRREICKRLSNLGYXXXXXXXXXXXXXEIPSGEHTYLEVTENSSNIKRGVIKVVIELNFRAEFEMARGNEEYNQLVKRLPEVFVGKAERLRVFVKIMCSAAKKCMKEKKLHLGPWRKQKYMLAKWDGKCDTSLLEPLPTLC-STRPRKPKASMLTFDLLENIV-AHHCTAVQVI 888 MD E S P A R+SD+V FADTVFGFW+ C E K FWEEQ QLLKA LCR+SS ETK+RQATK L+ELN+SEMLC+CRR V AKSCRNCL RE+C RL NLGY EIPSGEHTYLEV N SN KRG +KVVIEL FRAEFEMAR NEEYN+L+KRLPEVFVGK++RLR VKIMCSA+KKCMKEKK+H+GPWRK KYM AKW C+ S E LPT+ S + K KASMLTFDLL+NI+ HCT V+V+ Sbjct: 1 MDKEFSTIPVAG-RSSDDVSFADTVFGFWDSSNSSNDRDDDDDDDDDDETI---------CTAENGKAFWEEQYQLLKAILCRTSSYETKVRQATKGVLRELNISEMLCICRRAEV-AKSCRNCLLREVCDRLLNLGYNCAICKSKWRSSPEIPSGEHTYLEVRNNVSNTKRGAVKVVIELYFRAEFEMARANEEYNKLIKRLPEVFVGKSDRLRALVKIMCSASKKCMKEKKMHIGPWRKHKYMQAKWFSTCEMSTTESLPTIMNSAQQPKSKASMLTFDLLDNIIHGLHCTTVEVV 287
BLAST of Ca_11242 vs. TrEMBL
Match: B9N5W3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_928996 PE=4 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 9.898e-74 Identity = 150/282 (53.19%), Postives = 185/282 (65.60%), Query Frame = 1 Query: 43 TSDEVIFADTVFGFWEEFQXXXXXXXXXXXXXXXXXXXXXXXXXXXCPIEKNKTFWEEQDQLLKATLCRSSSRETKIRQATKEALKELNMSEMLCMCRRPVVEAKSCRNCLRREICKRLSNLGYXXXXXXXXXXXXXEIPSGEHTYLEVTENSSNIKRGVIKVVIELNFRAEFEMARGNEEYNQLVKRLPEVFVGKAERLRVFVKIMCSAAKKCMKEKKLHLGPWRKQKYMLAKWDGKCDTSLLEPLPTLCSTRPRKPKASMLTFDLLENIVAHHCTAVQVI 888 + D F D VFGF EE + C +E+NK FW+EQ+QLL+ATL R+SS E KIRQATK+ LKE+++ M C+C + V A CR+CL+REI RL N GY EIPSGEHT+LEV S+ K+G ++VVIELNFRAEFEMA+ N+EYNQL+ RLPEVFVGKAERL +KI+CSAAKKCMKEKK+HLGPWRK KYM +KW C+ + PLP S R KP+ASMLT+DLLE + HCTAV+V+ Sbjct: 22 SDDPAYFTDIVFGFLEEQEVSPDGSCASGGEYNEEDEDEISP----CNVEENKKFWDEQNQLLQATLYRTSSLEAKIRQATKDTLKEIDVVGMHCLCGKLV--AGDCRDCLQREISIRLQNEGYNCAICKSKWKRSEEIPSGEHTFLEVVGKLSS-KKGEVRVVIELNFRAEFEMAKANQEYNQLISRLPEVFVGKAERLTALIKILCSAAKKCMKEKKMHLGPWRKHKYMQSKWIATCERTTPAPLPGGFSDRTAKPRASMLTYDLLETLPVLHCTAVEVL 296
BLAST of Ca_11242 vs. TrEMBL
Match: M5VGF0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009489mg PE=4 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 2.205e-73 Identity = 144/235 (61.28%), Postives = 170/235 (72.34%), Query Frame = 1 Query: 187 IEKNKTFWEEQDQLLKATLCRSSSRETKIRQATKEALKELNMSEM-LCMCRRPVVEAKSCRNCLRREICKRLSNLGYXXXXXXXXXXXXXEIPSGEHTYLEVTENSSNIKRGVIKVVIELNFRAEFEMARGNEEYNQLVKRLPEVFVGKAERLRVFVKIMCSAAKKCMKEKKLHLGPWRKQKYMLAKWDGKCDTSLLEPLPTLCSTRPRKPKASMLTFDLLENIVAHHCTAVQVI 888 +E+NK FWEEQDQLL+ATLC+SS ETKIRQATKEAL+++N S C+C +PV CR+CLR E+C RL + GY P+GEHTYLEV + SS KRG I+VVIELNFRAEFEMAR +E YN+L+ LPEVFVGKAERLR +KI+C AAKKCMKEKK+HLGPWRK KYM AKW G + S LP + P KPKASMLTFDLLE + HCTAV+V+ Sbjct: 60 VEENKAFWEEQDQLLQATLCKSSGIETKIRQATKEALRDINSSAAEYCVCSKPVFGG--CRSCLRNELCNRLIDFGYNCVICKSKWRSSTSTPAGEHTYLEVLDTSS--KRGEIRVVIELNFRAEFEMARASENYNRLISWLPEVFVGKAERLRALIKILCCAAKKCMKEKKMHLGPWRKHKYMQAKWFGTFERSTPGSLPVRFANGPPKPKASMLTFDLLEAMPGLHCTAVEVV 290
BLAST of Ca_11242 vs. TrEMBL
Match: B9RVY5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174190 PE=4 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 1.338e-70 Identity = 143/278 (51.44%), Postives = 182/278 (65.47%), Query Frame = 1 Query: 61 FADTVFGFWEEFQXXXXXXXXXXXXXXXXXXXXXXXXXXXCPIEKNKTFWEEQDQLLKATLCRSSSRETKIRQATKEALKELNMSEMLCMCRRPVVEAKSCRNCLRREICKRLSNLGYXXXXXXXXXXXXXEIPSGEHTYLEVTENSSNIKRGVIKVVIELNFRAEFEMARGNEEYNQLVKRLPEVFVGKAERLRVFVKIMCSAAKKCMKEKKLHLGPWRKQKYMLAKWDGKCD--TSLLEPLPTLCSTRPRKPKASMLTFDLLENIVAHHCTAVQVI 888 FAD VFGF EE + +E+N+ FWE Q++LL+ATL R+SS E KIRQATK+A++E+ + C C P CRN L+REI RL GY +IPSGEHT+LEV E N K+G ++VVIELNFR EFEMAR ++EYNQL+ RLPE+FVGKAERL+ +K++CSAAKKCMKEKK+HLGPWRK KYM +KW G C+ TS ++PLP S RP KP+ASMLT+D+L+N+ HCTAV+V+ Sbjct: 24 FADIVFGFLEEQEESPKSSCDSNDYLEDDEDDSSSS------VEENRKFWETQEELLQATLYRTSSLEMKIRQATKDAVREIKQLGLRCPCHEPATG--QCRNFLQREISLRLQAEGYNCAICKSKWKSSHDIPSGEHTFLEVVEKL-NSKKGEVRVVIELNFRGEFEMARASQEYNQLINRLPEMFVGKAERLKALLKVLCSAAKKCMKEKKMHLGPWRKHKYMQSKWLGTCERTTSAMDPLPVGFSDRPTKPRASMLTYDMLQNLPVLHCTAVKVL 292
BLAST of Ca_11242 vs. TrEMBL
Match: B9N2D5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_783946 PE=4 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.282e-70 Identity = 147/283 (51.94%), Postives = 179/283 (63.25%), Query Frame = 1 Query: 43 TSDEVIFADTVFGFWEEFQXXXXXXXXXXXXXXXXXXXXXXXXXXXCPIEKNKTFWEEQDQLLKATLCRSSSRETKIRQATKEALKELNMSEMLCMCRRPVVEAKSCRNCLRREICKRLSNLGYXXXXXXXXXXXXXEIPSGEHTYLEVTENSSNIKRGVIKVVIELNFRAEFEMARGNEEYNQLVKRLPEVFVGKAERLRVFVKIMCSAAKKCMKEKKLHLGPWRKQKYMLAKWDGKCDTSLLEP-LPTLCSTRPRKPKASMLTFDLLENIVAHHCTAVQVI 888 + D F D VFG WEE + C +E+N FWE Q QLL+ TL R+SS ETKIRQATKEA+KE++ M C+C +P+ A CRNCL+REI RL N GY EIPSGEHT+LEV + N K+G +VVIELNFRAEFEMA+ N+EY QL+ RLPEV+VGK ERL+ +KI+CSAAK+CMKEKK+HLGPWRK KYM +KW G C+ + P P S RP K +ASMLT DL E + HCTAVQV+ Sbjct: 22 SDDPAYFTDIVFGSWEEQEVSHESLCTSGDYNEDDGDDDEISP---CNVEENNKFWETQLQLLQGTLYRTSSLETKIRQATKEAMKEIDGVGMYCLCGKPMPGA--CRNCLQREISIRLQNQGYNCAICESKWKRSEEIPSGEHTFLEVVDKL-NSKKGEARVVIELNFRAEFEMAKANQEYKQLINRLPEVYVGKTERLKALIKILCSAAKECMKEKKMHLGPWRKLKYMQSKWAGTCERTTPAPYFPGGFSDRPPKSRASMLTCDLSEALPVWHCTAVQVL 298
BLAST of Ca_11242 vs. TrEMBL
Match: F6H9C4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0265g00090 PE=4 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 1.635e-68 Identity = 136/235 (57.87%), Postives = 165/235 (70.21%), Query Frame = 1 Query: 187 IEKNKTFWEEQDQLLKATLCRSSSRETKIRQATKEALKELNMSEMLCMCRRPVVEAKSCRNCLRREICKRLSNLGYXXXXXXXXXXXXXEIPSGEHTYLEVTENSSNIKRGVIKVVIELNFRAEFEMARGNEEYNQLVKRLPEVFVGKAERLRVFVKIMCSAAKKCMKEKKLHLGPWRKQKYMLAKWDGKCDTSL-LEPLPTLCSTRPRKPKASMLTFDLLENIVAHHCTAVQVI 888 +E+NK FWE Q Q+L TLCR+SS E IR ATKEALKE+ M + +C+C RPVV CR+CL RE+ RL N GY IPSGEHT+L+V NSS K+G ++V+IELNFRAEFEMAR +EEYN+L++RLPEVFVGK ERL VKI+C AAKKCMKEKK+H+GPWRK +YM AKW C S L + S R KPKASMLT DL+E + HCTAV+V+ Sbjct: 78 VEENKNFWESQHQILHTTLCRTSSLELGIRNATKEALKEIQMDDNVCVCLRPVVGG--CRSCLLREVSDRLRNAGYNSAICKSKWRSSPNIPSGEHTFLDVVHNSS-AKKGEVRVIIELNFRAEFEMARASEEYNRLIRRLPEVFVGKVERLHTLVKILCMAAKKCMKEKKMHMGPWRKHRYMQAKWLSTCVRSTSTSSLLSGDSGRLPKPKASMLTVDLMEKLPNMHCTAVEVV 309
BLAST of Ca_11242 vs. TrEMBL
Match: B9H2U2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_555791 PE=4 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.210e-65 Identity = 135/236 (57.20%), Postives = 167/236 (70.76%), Query Frame = 1 Query: 187 IEKNKTFWEEQDQLLKATLCRSSSRETKIRQATKEALKELNMSEMLCMCRRPVVEAKSCRNCLRREICKRLSNLGYXXXXXXXXXXXXXEIPSGEHTYLEVTENSSNIKRGVIKVVIELNFRAEFEMARGNEEYNQLVKRLPEVFVGKAERLRVFVKIMCSAAKKCMKEKKLHLGPWRKQKYMLAKW-DGKCDTSL-LEPLPTLCSTRPRKPKASMLTFDLLENIVAHHCTAVQVI 888 +E++K+FWE Q QLL ATL R+SS E++IR +KEALKE+ M+ +C C RP+ A SCR+CL E+ RL N GY IPSGEHT+++V +NSS+ KRG ++V+IELNFRAEFEMA+ +EEYNQLV RLPEVFVGK ERL VKI+C AAKKCMKEKK+HLGPWRKQ+YM AKW C+ S + P S R +PKASMLT DL E + HCTAV V+ Sbjct: 74 VEEDKSFWENQHQLLHATLFRTSSLESRIRSISKEALKEIQMAGTICGCGRPM--AASCRSCLMAEVSSRLRNAGYNSAICKTKWRSSPGIPSGEHTFMDVIDNSSS-KRGEVRVIIELNFRAEFEMAKASEEYNQLVHRLPEVFVGKVERLNSVVKILCLAAKKCMKEKKMHLGPWRKQRYMQAKWLRTTCERSTSMPPFSMGSSGRLPRPKASMLTVDLKEMLPDVHCTAVAVV 306
BLAST of Ca_11242 vs. TrEMBL
Match: M5WGU8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009430mg PE=4 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 8.399e-65 Identity = 132/237 (55.70%), Postives = 167/237 (70.46%), Query Frame = 1 Query: 190 EKNKTFWEEQDQLLKATLCRSSSRETKIRQATKEALKELNMSEMLCMCRRPVVEAKSCRNCLRREICKRLSNLGYXXXXXXXXXXXXXEIPSGEHTYLEVTENSSNIKRGVIKVVIELNFRAEFEMARGNEEYNQLVKRLPEVFVGKAERLRVFVKIMCSAAKKCMKEKKLHLGPWRKQKYMLAKWDGKCDTSLLEPLPTLCST---RPRKPKASMLTFDLLENIVAHHC-TAVQVI 888 EK++ FWE Q QLL+ TLCR+SS ET+IR TKEA+ E+N C C +P+ A CR+CL RE+ RL N GY +IPSGEHT+++V + SSN K+G ++V+IELNFRAEFEMAR + EYN LV RLPEVFVGK ERL+ +KI+CSAAKKCMKEKK+H+GPWRKQKYM AKW C + PL ++ ++ RP KPK SMLT DLLE + +C TAV+V+ Sbjct: 61 EKDRRFWENQHQLLQTTLCRTSSLETRIRSVTKEAVNEINREGTECGCGKPM--ASGCRSCLMREVSGRLCNAGYNSAICKSKWRSSPDIPSGEHTFIDVVD-SSNPKKGEVRVIIELNFRAEFEMARASNEYNNLVNRLPEVFVGKVERLQNLIKILCSAAKKCMKEKKMHMGPWRKQKYMQAKWLSPCKRTTSTPLLSVGNSGRLRP-KPKESMLTVDLLEMLPNSYCITAVEVV 293 The following BLAST results are available for this feature:
BLAST of Ca_11242 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_11242 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_11242_v1.0_kabuli ID=Ca_11242_v1.0_kabuli; Name=Ca_11242; organism=Cicer arietinum; type=mRNA; length=891bpback to top protein sequence of Ca_11242_v1.0_kabuli >Ca_11242_v1.0_kabuli ID=Ca_11242_v1.0_kabuli; Name=Ca_11242_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=296bpback to top mRNA from alignment at Ca6:21968294..21969439- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_11242_v1.0_kabuli ID=Ca_11242_v1.0_kabuli; Name=Ca_11242; organism=Cicer arietinum; type=mRNA; length=1146bp; location=Sequence derived from: Ca6:21968294..21969439- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca6:21968294..21969439- >Ca_11242_v1.0_kabuli ID=Ca_11242_v1.0_kabuli; Name=Ca_11242; organism=Cicer arietinum; type=CDS; length=891bp; location=Sequence derived from: Ca6:21968294..21969439- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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