Psat6g005600.1

Transcript Overview
NamePsat6g005600.1
Unique NamePsat6g005600.1_Ps_Cameor_v1a
TypemRNA
OrganismPisum sativum (pea)
Sequence length1466
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6LG2supercontigchr6LG2:3906949..3908414 +Pisum sativum Cameor genome v1an/a
chr6LG2supercontigchr6LG2:3906949..3908414 +Pisum sativum Cameor genome v1an/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan: P. sativum Cameor genome v1a2019-09-12
BLAST: P. sativum Cameor genome v1a vs. Swissprot2019-09-12
Pisum sativum Cameor genome v1a2019-09-06
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
crpsL366Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpsL373Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpsL479Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caipsL401Cicer arietinum ICC 4958 genome v2Cicer arietinum
capsL340Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
psvuR622Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuR651Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pspvR580Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvR700Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpsL806Cajanus cajan Asha genome v1.0Cajanus cajan
anpsL0097Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0304Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0351Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0649Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspsL232Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspsL764Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pszwsR580Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pszwsR594Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pstifR574Vicia faba cv. Tiffany genome v1.0Vicia faba
pstifR649Vicia faba cv. Tiffany genome v1.0Vicia faba
psvfhR554Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvfhR634Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvrvR508Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvrvR512Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvuaR592Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvuaR599Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvssR709Vicia sativa cv. Studenica genome v1.0Vicia sativa
psvssR715Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpsL343Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpsL442Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpsL597Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpsL764Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpsL320Cicer arietinum
ccapsL546Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapsL663Cajanus cajan cv. Asha genome v2.0Cajanus cajan
psvumR664Vigna umbellata FF25 genome v1.0Vigna umbellata
psvumR692Vigna umbellata FF25 genome v1.0Vigna umbellata
psvvaR756Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvasR583Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvasR599Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvstR592Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvstR619Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pspvfR606Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
psvunR596Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
psvunR623Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pspvfR737Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Va04G069500.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun08g010700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
evm.model.Chr09.1268Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_08664.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
jg35135.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.001G009800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_12364Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.3g234280.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_014647955.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cr_12742.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
XM_058869359.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_03G02036.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Tiffany.R1.3g191160.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Va07G070700.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun09g250100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.2g204760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigan.03G287700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_014645281.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_031798Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun09g250100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun08g010700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg55900.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_07760.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
PvulFLAVERTChr01.74Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.02G026300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigst.03G184800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.02G031400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_02G00271.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Tiffany.R1.2g165840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cc_v2.0_10949.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
PvulFLAVERTChr09.1000137Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_15170.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
LR48_mrnaVigan07g282100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr08.618Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan09g028500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.009G013700.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_027334549.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004499154.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_10767Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_08171Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_31032Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Psat06G0014600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat05G0047400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Psat6g005600Psat6g005600_Ps_Cameor_v1aPisum sativumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Psat6g005600.1Psat6g005600.1_Ps_Cameor_v1a-proteinPisum sativumpolypeptide
Psat6g005600.1_Ps_Cameor_v1aPsat6g005600.1_Ps_Cameor_v1aPisum sativumpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat6g005600.1.cds1Psat6g005600.1.cds1_Ps_Cameor_v1aPisum sativumCDS
Psat6g005600.1.cds2Psat6g005600.1.cds2_Ps_Cameor_v1aPisum sativumCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat6g005600.1.exon1Psat6g005600.1.exon1_Ps_Cameor_v1aPisum sativumexon
Psat6g005600.1.exon2Psat6g005600.1.exon2_Ps_Cameor_v1aPisum sativumexon


Homology
BLAST of Psat6g005600.1 vs. DB:Swiss
Match: SRS5_ARATH (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.467e-47
Identity = 142/366 (38.80%), Postives = 175/366 (47.81%), Query Frame = 1
Query:    1 MAGFFSLSSGRGKEEAREQEEXXXXXXXXXQ------FLFRNEEIYNNKGFEIWXXXXXXXXXXXXNLN---------NFYXXXXXXXXXXXXXXRRNENNLNDDVSVSFSDESTRFGLTVMRXXXXXXXXXXMNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPNDTSAGGASGS-LACTPIPITTTVSAM--------------------------DAQDERYAYQTAVNIGGRVFKGILYDQGLESSYTGVNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFEYSSLYPAPLNAFMAGTQFFPPPRS 972
            MAGFF L          +Q+ +    + ++Q      +L+++E   NNKGFEIWP        HQQ            NFYSFG+   G   +++     +L  +V    SD     G TV R  G       MNCQDCGNQAKKDCPH+RCRTCCKSRGF CQTHVKSTWVPAAKRRER  QL+SLQ  +   ++ Q  +        +N +D    G  GS LA T +    + S +                          D  D+ YAYQTAVNIGG +FKGILYDQG E                    S+              T   N     + SSLYPA LN+F+AGT FF PPRS
Sbjct:    1 MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNV---VSDHEPG-GFTVTRQGG-------MNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQ---------DNHHLNLLASTATTTNVEETATKTVTGNNNNGLMLDPSSLYPAQLNSFIAGTPFFTPPRS 346          
BLAST of Psat6g005600.1 vs. DB:Swiss
Match: SRS7_ARATH (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.206e-44
Identity = 140/355 (39.44%), Postives = 183/355 (51.55%), Query Frame = 1
Query:    1 MAGFFSLSSGR--GKEEAREQEEXXXXXXXXXQFLFRNEEIYNNKGFEIWXXXXXXXXXXXXNL---NNFYXXXXXXXXXXXXXXRRNENNLN-DDVSVSFSDESTRFGLTVMRXXXXXXXXXXMNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPNDTSAGGASGSLACT---------------PIPITTT-------VSAMDAQDERYAYQTAVNIGGRVFKGILYDQGLESSYTGVNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFEYSSLYPA---PLNAFMA-GTQFFPPPR 969
            MAG F L  GR   K++  +++++N   + N  +L+++E   NNKGFEI+P         Q +     N YSFG+   GG  +++R    +L  + VS      S+  G TV R          MNCQDCGNQAKKDCPH+RCRTCCKSRGF CQTHVKSTWV AAKRRERQ QL+ L  +       +           +  ND+  GG+  +LACT               P  I++        VS++D +DE YAYQTAV+IGG VFKGILYDQG  S +   ++            +           N +T   TN  +  + SSLY A   P NAF+A GT FF   R
Sbjct:    1 MAGLFYLG-GRDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQQQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQGN-------MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGS--ALACTRVVNASSSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGS-IDPSSLYTAVATPFNAFVAGGTPFFASSR 344          
BLAST of Psat6g005600.1 vs. DB:Swiss
Match: SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.371e-32
Identity = 95/219 (43.38%), Postives = 126/219 (57.53%), Query Frame = 1
Query:  361 CQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEN------PNDTSAGGASGSLACTPIPITTT-------VSAMDAQDERYAYQTAVNIGGRVFKGILYDQG-LESSYTGVNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFEYSSL-YPAPLNAFMAGTQFFPPPRS 972
            CQDCGNQ+KKDC H+RCRTCCKSRG  C THVKSTWVPAAKRRERQ QLS+ QQ  Q      ++Q         +      P++ ++G   G+    P  ++++       VS++D ++E YAY+TAV+IGG VFKG+LYDQG  E S +G  +   +    G   SS       N   + +T+        + +SL YP P+N FM GT FF   RS
Sbjct:  120 CQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNF---PPEVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGVVGSTSDHY----IDPASLNYPTPINTFMTGTHFFSNSRS 331          
BLAST of Psat6g005600.1 vs. DB:Swiss
Match: SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.887e-30
Identity = 74/151 (49.01%), Postives = 93/151 (61.59%), Query Frame = 1
Query:  355 MNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPNDTSAGGASGSLACTPIP-------------ITTT-------VSAMDAQDERYAYQTAVNIGGRVFKGILYD 747
            ++CQDCGNQAKKDC H+RCRTCCKSRGF+C THV+STWVPAAKRRE        Q      Q Q  +     +RHREN   TS+     SL CT IP             ++++       VS+++  +E +AYQTAV+IGG +FKGILYD
Sbjct:  142 VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRE-----RQQQLATVQPQTQLPRGESVPKRHRENLPATSS-----SLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYD 282          
BLAST of Psat6g005600.1 vs. DB:Swiss
Match: SRS3_ARATH (Protein SHI RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=SRS3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.041e-29
Identity = 62/133 (46.62%), Postives = 76/133 (57.14%), Query Frame = 1
Query:  361 CQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPNDTSAGGASGSLACTPIPITTTVSAMDAQDERYAYQTAVNIGGRVFKGILYDQGLE 759
            C+DCGNQAKKDC ++RCRTCCKS+ F CQTH+KSTWVPA +R   +HQ   L        Q                  T+ G     L+         VS++D   E+YAYQT VNIGG VF+GIL+DQGL 
Sbjct:    9 CEDCGNQAKKDCVYMRCRTCCKSKAFHCQTHIKSTWVPAYRRSHHKHQSQPLSTSIPKGVQI----------------HTTPGHFPAELSSLADFRCVKVSSIDDGKEQYAYQTTVNIGGHVFRGILHDQGLH 125          
BLAST of Psat6g005600.1 vs. DB:Swiss
Match: SRS2_ARATH (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.699e-27
Identity = 67/155 (43.23%), Postives = 82/155 (52.90%), Query Frame = 1
Query:  355 MNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPNDTSAG----------GASGSLACTPIPITTTVSAM----------DAQDERYAYQTAVNIGGRVFKGILYDQGLE 759
            ++C+DCGNQAKKDC H+RCRTCCKSRGF C THV+STW+P A+RRERQ QL                    S   + + + T  G           A   +     P   +  A+          D  D +YAYQT VNIGG +FKGILYDQG E
Sbjct:   92 ISCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246          
BLAST of Psat6g005600.1 vs. DB:Swiss
Match: SRS4_ARATH (Protein SHI RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=SRS4 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.319e-23
Identity = 57/137 (41.61%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  355 MNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPNDTSAGGA--SGSLACTPIPITTTVSAMDAQDERYAYQTAVNIGGRVFKGILYDQGLE 759
            ++CQ+CGNQAKK C H RCRTCCKS G  C THV+STW+P AKRRERQ QL +          +  +    ++    + +    G       ++   +     +S  D  + +YAYQT V I G +FKGILY+QG E
Sbjct:   70 ISCQECGNQAKKGCTHGRCRTCCKSNGLHCPTHVRSTWIPIAKRRERQQQLQTPTSNPTGGSGRVGKYRDINQHATLDSSGLEMGETRFPDEVSSDALFRCVRMSGTDDGEGQYAYQTTVGIAGHLFKGILYNQGPE 206          
BLAST of Psat6g005600.1 vs. DB:Swiss
Match: LRP1_ARATH (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.758e-23
Identity = 63/160 (39.38%), Postives = 70/160 (43.75%), Query Frame = 1
Query:  361 CQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPNDTSAGGASGSLACTPIPITTTVSAMDAQDER---------------------------YAYQTAVNIGGRVFKGILYDQGLE 759
            CQDCGNQAKK+C   RCRTCCKSRGF C THVKSTWV AA+RRERQ   +                        +      A   + +    P    T+ S  D    R                           YAYQ  V IGG VFKG LYDQGLE
Sbjct:  112 CQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLE 271          
BLAST of Psat6g005600.1 vs. DB:Swiss
Match: SRS8_ARATH (Protein SHI RELATED SEQUENCE 8 OS=Arabidopsis thaliana OX=3702 GN=SRS8 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.352e-19
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 1
Query:  355 MNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRE 492
            ++CQD GNQAKKDC H+RCRTCCKSRGF+C THV+STWVPA KRRE
Sbjct:   50 VSCQDFGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPATKRRE 95          
BLAST of Psat6g005600.1 vs. DB:Swiss
Match: SRS6_ARATH (Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.918e-15
Identity = 48/140 (34.29%), Postives = 68/140 (48.57%), Query Frame = 1
Query:  361 CQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPNDTSAG------GASGSLACTPIPITTTVSAMDAQDE-RYAYQTAVNIGGRVFKGILYDQGLE 759
            C+DCGN+AKK+C   RCRTCCKSRG+ C THVKSTW+P++  R         ++    +Q                P  TS        G  G +    +   T V+A+   ++    YQ  V I G +FKG L+  G++
Sbjct:   41 CRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATRSSSSPSERKKKLKIDKQSSPNVSLL--------PTTTSRQERGFREGLPGKIEAPAVFKRTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYYGVD 172          
The following BLAST results are available for this feature:
BLAST of Psat6g005600.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
SRS5_ARATH1.467e-4738.80Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thal... [more]
SRS7_ARATH8.206e-4439.44Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thal... [more]
SHI_ARATH1.371e-3243.38Protein SHORT INTERNODES OS=Arabidopsis thaliana O... [more]
SRS1_ARATH1.887e-3049.01Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thal... [more]
SRS3_ARATH2.041e-2946.62Protein SHI RELATED SEQUENCE 3 OS=Arabidopsis thal... [more]
SRS2_ARATH1.699e-2743.23Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thal... [more]
SRS4_ARATH3.319e-2341.61Protein SHI RELATED SEQUENCE 4 OS=Arabidopsis thal... [more]
LRP1_ARATH3.758e-2339.38Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis t... [more]
SRS8_ARATH1.352e-1980.43Protein SHI RELATED SEQUENCE 8 OS=Arabidopsis thal... [more]
SRS6_ARATH6.918e-1534.29Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thal... [more]
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InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..182
NoneNo IPR availablePFAMPF05142DUF702coord: 118..253
e-value: 2.7E-47
score: 161.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..210
IPR006511SHORT INTERNODES, C-terminalTIGRFAMTIGR01624TIGR01624coord: 218..252
e-value: 7.3E-14
score: 49.4
IPR006510Zinc finger, lateral root primordium type 1TIGRFAMTIGR01623TIGR01623coord: 120..162
e-value: 1.2E-26
score: 90.4

Sequences
The following sequences are available for this feature:

mRNA sequence

>Psat6g005600.1_Ps_Cameor_v1a ID=Psat6g005600.1_Ps_Cameor_v1a; Name=Psat6g005600.1; organism=Pisum sativum; type=mRNA; length=1466bp
ATGGCAGGTTTCTTCTCTCTAAGCAGTGGAAGAGGAAAAGAAGAAGCAAG
AGAACAAGAAGAAAATAATAACAGTGGAAACACTAATAATCAGTTTCTCT
TCAGAAACGAAGAGATCTACAACAACAAAGGATTCGAGATATGGCCGCAA
CCACAACAATCTTCTTTTCATCATCAACAAAATCTTAACAACTTTTACTC
CTTCGGTGTTGGTGGTGGAGGTGGAGGTGGAAGCAGTAGTAGAAGAAACG
AAAACAATTTAAACGACGATGTTTCCGTTTCGTTTTCCGATGAATCAACT
AGATTTGGATTAACAGTGATGAGGTCTTCCGGCGGTGGTTTAAGCGGCGG
TGGAATGAACTGCCAAGATTGCGGTAACCAAGCGAAGAAAGATTGTCCTC
ATCTTAGATGCAGAACTTGTTGTAAGAGCCGAGGGTTTCAGTGTCAAACT
CATGTTAAAAGTACTTGGGTTCCCGCCGCGAAACGCCGTGAACGGCAGCA
TCAGCTTTCATCTTTGCAGCAACAAAATCAGCACCAGCAGCAGCAACAAC
AACAACAGTTTCATTCCTCACGACGACACAGAGAAAATCCAAACGATACT
TCTGCAGGAGGAGCTTCTGGTTCTCTTGCTTGTACTCCAATACCTATCAC
TACCACAGGTATATATATAAAAAATAACTGAAAGAGAGAGTTTACAAAAT
GAAAATAAAAAAATAATCACGAGTGTTTGAATTTTAGTGTTTAGTTTTAT
GATATATAGCTAGGTCAGTGAAATTTTTTCAAACTATATAGCTTGTTGAT
AGAGATCTCGAAGAGAGGAATTCTAGTCTTCTATGATAAATAGGATACCT
AATTGGTCTATATAATCTATCTCTCCATTCCTTTCAGACTCTAATCTATC
ACCTTGTTTCTATTTTTTTTCTTCTTCTTCTTTTTCTCTCTCTATTTTTT
TAATCATTTGTGAAGATGAAATTGTTAGGTAAATGGTTCTTTCTTTCTTT
TATTCATGAAAATGATAGCTATATAGAGTCATTGAGGTTTAATTTCTGTG
ATTTTGATGTATAGATTATGATTGTTTTGAAATTAGGGTTGGAGCTGGGG
AGTTTTCCCCCGGAACTGAATTCACCGGCGGTGTTCCGGTGTGTGAAAGT
GAGTGCAATGGATGCACAGGATGAACGTTACGCTTATCAAACTGCTGTGA
ACATAGGAGGACGTGTTTTCAAGGGAATTCTCTATGATCAAGGACTTGAA
AGTAGTTACACTGGTGTAAATGCTGGTGGTGGAAGTGGTGGTGGTGGTGG
TGGTGAGGGTTCTTCTGGTGGTGGCGGCGGTGAAGGAAATCAACAGAATC
TGATAACAACCACCACAACAAATGTTAACAATCCATTTGAATACTCATCA
CTTTATCCAGCACCTCTTAATGCTTTCATGGCTGGTACGCAATTCTTCCC
ACCTCCAAGATCCTAA
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protein sequence of Psat6g005600.1_Ps_Cameor_v1a

>Psat6g005600.1_Ps_Cameor_v1a ID=Psat6g005600.1_Ps_Cameor_v1a; Name=Psat6g005600.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=325bp
MAGFFSLSSGRGKEEAREQEENNNSGNTNNQFLFRNEEIYNNKGFEIWPQ
PQQSSFHHQQNLNNFYSFGVGGGGGGGSSSRRNENNLNDDVSVSFSDEST
RFGLTVMRSSGGGLSGGGMNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQT
HVKSTWVPAAKRRERQHQLSSLQQQNQHQQQQQQQQFHSSRRHRENPNDT
SAGGASGSLACTPIPITTTVSAMDAQDERYAYQTAVNIGGRVFKGILYDQ
GLESSYTGVNAGGGSGGGGGGEGSSGGGGGEGNQQNLITTTTTNVNNPFE
YSSLYPAPLNAFMAGTQFFPPPRS*
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mRNA from alignment at chr6LG2:3906949..3908414+

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat6g005600.1_Ps_Cameor_v1a ID=Psat6g005600.1_Ps_Cameor_v1a; Name=Psat6g005600.1; organism=Pisum sativum; type=mRNA; length=1466bp; location=Sequence derived from: chr6LG2:3906949..3908414+ (Pisum sativum
ATGGCAGGTTTCTTCTCTCTAAGCAGTGGAAGAGGAAAAGAAGAAGCAAG AGAACAAGAAGAAAATAATAACAGTGGAAACACTAATAATCAGTTTCTCT TCAGAAACGAAGAGATCTACAACAACAAAGGATTCGAGATATGGCCGCAA CCACAACAATCTTCTTTTCATCATCAACAAAATCTTAACAACTTTTACTC CTTCGGTGTTGGTGGTGGAGGTGGAGGTGGAAGCAGTAGTAGAAGAAACG AAAACAATTTAAACGACGATGTTTCCGTTTCGTTTTCCGATGAATCAACT AGATTTGGATTAACAGTGATGAGGTCTTCCGGCGGTGGTTTAAGCGGCGG TGGAATGAACTGCCAAGATTGCGGTAACCAAGCGAAGAAAGATTGTCCTC ATCTTAGATGCAGAACTTGTTGTAAGAGCCGAGGGTTTCAGTGTCAAACT CATGTTAAAAGTACTTGGGTTCCCGCCGCGAAACGCCGTGAACGGCAGCA TCAGCTTTCATCTTTGCAGCAACAAAATCAGCACCAGCAGCAGCAACAAC AACAACAGTTTCATTCCTCACGACGACACAGAGAAAATCCAAACGATACT TCTGCAGGAGGAGCTTCTGGTTCTCTTGCTTGTACTCCAATACCTATCAC TACCACAGGTATATATATAAAAAATAACTGAAAGAGAGAGTTTACAAAAT GAAAATAAAAAAATAATCACGAGTGTTTGAATTTTAGTGTTTAGTTTTAT GATATATAGCTAGGTCAGTGAAATTTTTTCAAACTATATAGCTTGTTGAT AGAGATCTCGAAGAGAGGAATTCTAGTCTTCTATGATAAATAGGATACCT AATTGGTCTATATAATCTATCTCTCCATTCCTTTCAGACTCTAATCTATC ACCTTGTTTCTATTTTTTTTCTTCTTCTTCTTTTTCTCTCTCTATTTTTT TAATCATTTGTGAAGATGAAATTGTTAGGTAAATGGTTCTTTCTTTCTTT TATTCATGAAAATGATAGCTATATAGAGTCATTGAGGTTTAATTTCTGTG ATTTTGATGTATAGATTATGATTGTTTTGAAATTAGGGTTGGAGCTGGGG AGTTTTCCCCCGGAACTGAATTCACCGGCGGTGTTCCGGTGTGTGAAAGT GAGTGCAATGGATGCACAGGATGAACGTTACGCTTATCAAACTGCTGTGA ACATAGGAGGACGTGTTTTCAAGGGAATTCTCTATGATCAAGGACTTGAA AGTAGTTACACTGGTGTAAATGCTGGTGGTGGAAGTGGTGGTGGTGGTGG TGGTGAGGGTTCTTCTGGTGGTGGCGGCGGTGAAGGAAATCAACAGAATC TGATAACAACCACCACAACAAATGTTAACAATCCATTTGAATACTCATCA CTTTATCCAGCACCTCTTAATGCTTTCATGGCTGGTACGCAATTCTTCCC ACCTCCAAGATCCTAA
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Coding sequence (CDS) from alignment at chr6LG2:3906949..3908414+

>Psat6g005600.1_Ps_Cameor_v1a ID=Psat6g005600.1_Ps_Cameor_v1a; Name=Psat6g005600.1; organism=Pisum sativum; type=CDS; length=1950bp; location=Sequence derived from: chr6LG2:3906949..3908414+ (Pisum sativum
ATGGCAGGTTTCTTCTCTCTAAGCAGTGGAAGAGGAAAAGAAGAAGCAAG
AGAACAAGAAGAAAATAATAACAGTGGAAACACTAATAATCAGTTTCTCT
TCAGAAACGAAGAGATCTACAACAACAAAGGATTCGAGATATGGCCGCAA
CCACAACAATCTTCTTTTCATCATCAACAAAATCTTAACAACTTTTACTC
CTTCGGTGTTGGTGGTGGAGGTGGAGGTGGAAGCAGTAGTAGAAGAAACG
AAAACAATTTAAACGACGATGTTTCCGTTTCGTTTTCCGATGAATCAACT
AGATTTGGATTAACAGTGATGAGGTCTTCCGGCGGTGGTTTAAGCGGCGG
TGGAATGAACTGCCAAGATTGCGGTAACCAAGCGAAGAAAGATTGTCCTC
ATCTTAGATGCAGAACTTGTTGTAAGAGCCGAGGGTTTCAGTGTCAAACT
CATGTTAAAAGTACTTGGGTTCCCGCCGCGAAACGCCGTGAACGGCAGCA
TCAGCTTTCATCTTTGCAGCAACAAAATCAGCACCAGCAGCAGCAACAAC
AACAACAGTTTCATTCCTCACGACGACACAGAGAAAATCCAAACGATACT
TCTGCAGGAGGAGCTTCTGGTTCTCTTGCTTGTACTCCAATACCTATCAC
TACCACAGATGGCAGGTTTCTTCTCTCTAAGCAGTGGAAGAGGAAAAGAA
GAAGCAAGAGAACAAGAAGAAAATAATAACAGTGGAAACACTAATAATCA
GTTTCTCTTCAGAAACGAAGAGATCTACAACAACAAAGGATTCGAGATAT
GGCCGCAACCACAACAATCTTCTTTTCATCATCAACAAAATCTTAACAAC
TTTTACTCCTTCGGTGTTGGTGGTGGAGGTGGAGGTGGAAGCAGTAGTAG
AAGAAACGAAAACAATTTAAACGACGATGTTTCCGTTTCGTTTTCCGATG
AATCAACTAGATTTGGATTAACAGTGATGAGGTCTTCCGGCGGTGGTTTA
AGCGGCGGTGGAATGAACTGCCAAGATTGCGGTAACCAAGCGAAGAAAGA
TTGTCCTCATCTTAGATGCAGAACTTGTTGTAAGAGCCGAGGGTTTCAGT
GTCAAACTCATGTTAAAAGTACTTGGGTTCCCGCCGCGAAACGCCGTGAA
CGGCAGCATCAGCTTTCATCTTTGCAGCAACAAAATCAGCACCAGCAGCA
GCAACAACAACAACAGTTTCATTCCTCACGACGACACAGAGAAAATCCAA
ACGATACTTCTGCAGGAGGAGCTTCTGGTTCTCTTGCTTGTACTCCAATA
CCTATCACTACCACAGTGAGTGCAATGGATGCACAGGATGAACGTTACGC
TTATCAAACTGCTGTGAACATAGGAGGACGTGTTTTCAAGGGAATTCTCT
ATGATCAAGGACTTGAAAGTAGTTACACTGGTGTAAATGCTGGTGGTGGA
AGTGGTGGTGGTGGTGGTGGTGAGGGTTCTTCTGGTGGTGGCGGCGGTGA
AGGAAATCAACAGAATCTGATAACAACCACCACAACAAATGTTAACAATC
CATTTGAATACTCATCACTTTATCCAGCACCTCTTAATGCTTTCATGGCT
GGTACGCAATTCTTCCCACCTCCAAGATCCTAATGAGTGCAATGGATGCA
CAGGATGAACGTTACGCTTATCAAACTGCTGTGAACATAGGAGGACGTGT
TTTCAAGGGAATTCTCTATGATCAAGGACTTGAAAGTAGTTACACTGGTG
TAAATGCTGGTGGTGGAAGTGGTGGTGGTGGTGGTGGTGAGGGTTCTTCT
GGTGGTGGCGGCGGTGAAGGAAATCAACAGAATCTGATAACAACCACCAC
AACAAATGTTAACAATCCATTTGAATACTCATCACTTTATCCAGCACCTC
TTAATGCTTTCATGGCTGGTACGCAATTCTTCCCACCTCCAAGATCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006511SHI_C
IPR006510Znf_LRP1