rna-KK1_019940

Transcript Overview


Name	rna-KK1_019940
Unique Name	rna-KK1_019940_Cc_Asha_v1.0
Type	mRNA
Organism	Cajanus cajan (pigeon pea)
Sequence length	1608
Product	T-complex protein 1 subunit epsilon

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_1-CM003603.1	supercontig	Chr_1-CM003603.1:1916043..1920242 -	Cajanus cajan Asha genome v1.0	n/a
Chr_1-CM003603.1	supercontig	Chr_1-CM003603.1:1916043..1920242 -	Cajanus cajan Asha genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cajanus cajan Asha genome v1.0	2019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot	2019-10-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
cccrR0011	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
cccrR0023	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
cccrR0028	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ccpsR022	Pisum sativum Cameor genome v1a	Pisum sativum
ccpsR036	Pisum sativum Cameor genome v1a	Pisum sativum
ccpvR0004	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccpvR0017	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccpvR0036	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccvuR0003	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccvuR0024	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
caiccL0517	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caiccL0680	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caccL0156	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
caccL0552	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
caccL0729	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anccL0001	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0255	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0379	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0433	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0833	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0912	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
asccL0005	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asccL0662	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
cctifR0008	Vicia faba cv. Tiffany genome v1.0	Vicia faba
cctifR0010	Vicia faba cv. Tiffany genome v1.0	Vicia faba
cctifR0034	Vicia faba cv. Tiffany genome v1.0	Vicia faba
ccvfhR0008	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvfhR0010	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvfhR0036	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvrvR0014	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccvrvR0035	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccvssR0010	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccvuaR0003	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
ccvssR0038	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccvuaR0015	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
canccL0154	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canccL0553	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canccL0735	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjccL0001	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjccL0330	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjccL0697	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carccL0160		Cicer arietinum
carccL0594		Cicer arietinum
carccL0785		Cicer arietinum
ccccaR0000	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccccaR0050	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccvumR0008	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccvumR0042	Vigna umbellata FF25 genome v1.0	Vigna umbellata

Orthologs


Gene/Transcript	Assembly	Species
Vigun01g242300.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Cr_13066.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
Va03G084680.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vum_04G03178.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
jg53636.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vfaba.Hedin2.R1.2g114280.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Ca_11296	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Psat5g092720.1	Pisum sativum Cameor genome v1a	Pisum sativum
rna-XM_014638278.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Vfaba.Tiffany.R1.2g093640.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
rna-XM_004502303.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
rna-TanjilR_17771	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
evm.model.Chr01.2284.1.6211317a	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Phvul.001G256700.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Ca_13826.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
LR48_mrnaVigan03g310900	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Cc_v2.0_00147.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-KK1_019940	gene-KK1_019940_Cc_Asha_v1.0	Cajanus cajan	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-KK1_019940	rna-KK1_019940_Cc_Asha_v1.0-protein	Cajanus cajan	polypeptide
rna-KK1_019940_Cc_Asha_v1.0	rna-KK1_019940_Cc_Asha_v1.0	Cajanus cajan	polypeptide

The following CDS feature(s) are a part of this mRNA:

The following exon feature(s) are a part of this mRNA:

Homology

[Close]

BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=CCT5 PE=1 SV=1)

HSP 1 Score: 989.178 bits (2556), Expect = 0.000e+0
Identity = 483/535 (90.28%), Postives = 522/535 (97.57%), Query Frame = 1

Query:    1 MALAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSEY 1605
            MALAFDEFGRPFIIL+EQ+QK+RLRG+DAQK+NI+AGKAVARILR+SLGPKGMDKMLQ PDGD+TITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVV+AGALLE+AER L+RGIHPIRIAEGYEMASR+AVEHLER+A KFEFD  N EPL+QTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLER+DVNLDLIKVEGKVGGKLEDTELIYGI++DKDMSHPQMPKQIEDA IAILTCPFEPPKPKTKHKVDIDTVEKF+TLR QEQ+YFD+MVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQEL+ EKLGKAG+VREKSFGTTK+RMLYIEHCANS+AVT+FIRGGNKM+IEETKRS+HDALCVARNLIRNKSIVYGGG+AEIACS+AV+AAAD+YPGVEQYAIRAF +AL+++PMALAENSGLQPIETLSAVK+QQIK+N P +GIDCNDVGTNDMREQNVFETLIGKQQQ+LLATQVVKMILKIDDVIS SEY
Sbjct:    1 MALAFDEFGRPFIILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQIEDAHIAILTCPFEPPKPKTKHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGVVREKSFGTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGAAEIACSLAVDAAADKYPGVEQYAIRAFAEALDSVPMALAENSGLQPIETLSAVKSQQIKENIPFYGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISNSEY 535

[Close]

BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1)

HSP 1 Score: 956.051 bits (2470), Expect = 0.000e+0
Identity = 471/535 (88.04%), Postives = 513/535 (95.89%), Query Frame = 1

Query:    1 MALAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSEY 1605
            MAL FDE+ RPFIIL+EQE+KSRL+GLDAQK+NI+AGK+VARILRTSLGPKGMDKMLQSPDGDVTITNDGATILE MDVDNQIAKLMVELSRSQDY+IGDGTTGVVV+AG+LLE+AE+LLERGIHPIR+AEGYEMASRIAV+HLE ++ K+EF  T++EPL+QTCMTTLSSKIV+RCKR+LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTEL+ GI+VDKDMSHPQMPK+IEDA IAILTCPFEPPKPKTKHKVDIDTVEKFQTLR QEQKYFD+MVQKCKDVGATLVICQWGFDDEANHLLM R LPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAG+VREKSFGTTKDRMLYIE CANS+AVTIFIRGGNKM+IEETKRS+HDALCVARNLI N SIVYGGGSAEI+CSIAVEAAADR+PGVEQYAIRAF DAL+AIP+ALAENSGL PI+TL+ VK+Q +K+NN   GIDCNDVGTNDM+EQNVFETLIGKQQQ+LLATQVVKMILKIDDVI+PSEY
Sbjct:    1 MALDFDEYWRPFIILREQEKKSRLQGLDAQKANIAAGKSVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLMVELSRSQDYDIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRALAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVQGIIVDKDMSHPQMPKRIEDAHIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQWGFDDEANHLLMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSFGTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVITPSEY 535

[Close]

BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1)

HSP 1 Score: 931.398 bits (2406), Expect = 0.000e+0
Identity = 469/535 (87.66%), Postives = 512/535 (95.70%), Query Frame = 1

Query:    1 MALAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSEY 1605
            MALAFDE+GRPFIIL+EQE+KSRL+GLDA K+NI+A KA+ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILE MDVDNQIAKL+VELSRSQDY+IGDGTTGVVV+AGALLE+AE+LLERGIHPIR+AEGYEMASRIAV+HLE ++ K+EF  T++EPL+QTCMTTLSSKIV+RCKR+LAEI+VKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTEL+ GI+VDKDMSHPQMPK+I DA IAILTCPFEPPKPKTKHKVDIDTVEKFQTLR QEQKYFD+MVQKCKDVGATLVICQWGFDDEANHLLM R LPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAG+VREKSFGTTKDRMLYIE CANS+AVTIFIRGGNKM+IEETKRS+HDALCVARNLI N SIVYGGGSAEI+CSIAVEAAADR+PGVEQYAIRAF DAL+AIP+ALAENSGL PI+TL+ VK+Q +K+NN   GIDCNDVGTNDM+EQNVFETLIGKQQQ+LLATQVVKMILKIDDVI+PSEY
Sbjct:    1 MALAFDEYGRPFIILREQEKKSRLQGLDAHKANIAAAKAIARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLLVELSRSQDYDIGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRALAEISVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVEGIIVDKDMSHPQMPKRIYDAHIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQWGFDDEANHLLMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSFGTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVITPSEY 535

[Close]

BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis OX=9541 GN=CCT5 PE=2 SV=1)

HSP 1 Score: 763.837 bits (1971), Expect = 0.000e+0
Identity = 372/532 (69.92%), Postives = 456/532 (85.71%), Query Frame = 1

Query:    7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
            LAFDE+GRPF+I+K+Q++KSRL GL+A KS+I A KAVA  +RTSLGP G+DKM+   DGDVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVVLAGALLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL+++++    D  + EPLIQT  TTL SK+VN C R +AEIAV AVL VAD+ER+DV+ +LIKVEGKVGG+LEDT+LI G++VDKD SHPQMPK++EDAKIAILTCPFEPPKPKTKHK+D+ +VE ++ L+  E++ F++M+Q+ K+ GA L ICQWGFDDEANHLL+  NLPAVRWVGG E+ELIAIATGGRIVPRF EL+ EKLG AG+V+E SFGTTKD+ML IE C NSRAVTIFIRGGNKMIIEE KRSLHDALCV RNLIR+  +VYGGG+AEI+C++AV   AD+ P +EQYA+RAF DALE IPMAL+ENSG+ PI+T++ V+A+Q+K+ NP  GIDC   GTNDM++Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+  P E
Sbjct:    7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538

[Close]

BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens OX=9606 GN=CCT5 PE=1 SV=1)

HSP 1 Score: 763.837 bits (1971), Expect = 0.000e+0
Identity = 372/532 (69.92%), Postives = 456/532 (85.71%), Query Frame = 1

Query:    7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
            LAFDE+GRPF+I+K+Q++KSRL GL+A KS+I A KAVA  +RTSLGP G+DKM+   DGDVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVVLAGALLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL+++++    D  + EPLIQT  TTL SK+VN C R +AEIAV AVL VAD+ER+DV+ +LIKVEGKVGG+LEDT+LI G++VDKD SHPQMPK++EDAKIAILTCPFEPPKPKTKHK+D+ +VE ++ L+  E++ F++M+Q+ K+ GA L ICQWGFDDEANHLL+  NLPAVRWVGG E+ELIAIATGGRIVPRF EL+ EKLG AG+V+E SFGTTKD+ML IE C NSRAVTIFIRGGNKMIIEE KRSLHDALCV RNLIR+  +VYGGG+AEI+C++AV   AD+ P +EQYA+RAF DALE IPMAL+ENSG+ PI+T++ V+A+Q+K+ NP  GIDC   GTNDM++Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+  P E
Sbjct:    7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538

[Close]

BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii OX=9601 GN=CCT5 PE=2 SV=1)

HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0
Identity = 370/532 (69.55%), Postives = 455/532 (85.53%), Query Frame = 1

Query:    7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
            LAFDE+GRPF+I+K+Q++KSRL GL+A KS+I A KAVA  +RTSLGP G+DKM+   DGDVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVVLAGALLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL+++++    D  + EPLIQT  TTL SK+VN C R +AEIAV AVL VAD+ER+DV+ +LIKVEGKVGG+LEDT+LI G++VDKD SHP+MPK++EDAKIAILTCPFEPPKPKTKHK+D+ +VE ++ L+  E++ F++M+Q+ K+ GA L ICQWGFDDEANHLL+  NLPAVRWVGG E+ELIAIATGGRIVPRF EL+ EKLG AG+V+E SFGTTKD+ML IE C NSRAVTIFIRGGNKMIIEE KRSLHDALCV RNLIR+  +VYGGG+AE +C++AV   AD+ P +EQYA+RAF DALE IPMAL+ENSG+ PI+T++ V+A+Q+K+ NP  GIDC   GTNDM++Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+  P E
Sbjct:    7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPRMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAETSCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538

[Close]

BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus OX=10090 GN=Cct5 PE=1 SV=1)

HSP 1 Score: 756.133 bits (1951), Expect = 0.000e+0
Identity = 370/532 (69.55%), Postives = 456/532 (85.71%), Query Frame = 1

Query:    7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
            LAFDE+GRPF+I+K+Q++KSRL GL+A KS+I A KAVA  +RTSLGP G+DKM+   DGDVTITNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVVLAGALLE+AE+LL+RGIHPIRIA+GYE A+RIA++HL+++++K   D  N EPLIQT  TTL SK++N C R +AEIAV AVL VAD+ER+DV+ +LIKVEGKVGG+LEDT+LI G++VDKD SHPQMPK++ DAKIAILTCPFEPPKPKTKHK+D+ +VE ++ L+  E++ F++M+++ K+ GA L ICQWGFDDEANHLL+   LPAVRWVGG E+ELIAIATGGRIVPRF EL++EKLG AG+V+E SFGTTKD+ML IE C NSRAVTIFIRGGNKMIIEE KRSLHDALCV RNLIR+  +VYGGG+AEI+C++AV   AD+ P +EQYA+RAF DALE IPMAL+ENSG+ PI+T++ V+A+Q+K++NP  GIDC   G+NDM+ Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+  P E
Sbjct:    7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDKVLVDINNPEPLIQTAKTTLGSKVINSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVVDAKIAILTCPFEPPKPKTKHKLDVMSVEDYKALQKYEKEKFEEMIKQIKETGANLAICQWGFDDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVQEISFGTTKDKMLVIEKCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538

[Close]

BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1)

HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0
Identity = 369/532 (69.36%), Postives = 454/532 (85.34%), Query Frame = 1

Query:    7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
            LAFDE+GRPF+I+K+Q++KSRL GL+A KS+I A KAVA  +RTSLGP G+DKM+   DGDVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVVLAGALLE+AE+LL+RGIHPIRIA+GYE A+RIA++HL+++++    D  N EPLIQT  TTL SK+VN C R +AEIAV AVL VAD+ER+DV+ +LIKVEGKVGG+LEDT+LI G++VDKD SHPQMPK++ +AKIAILTCPFEPPKPKTKHK+D+ +VE ++ L+  E++ F++M+ + K+ GA L ICQWGFDDEANHLL+   LPAVRWVGG E+ELIAIATGGRIVPRF EL++EKLG AG+VRE SFGTTKD+ML IE C NSRAVTIFIRGGNKMIIEE KRSLHDALCV RNLIR+  +VYGGG+AEI+C++AV   AD+ P +EQYA+RAF DALE IPMAL+ENSG+ PI+T++ V+A+Q+K++NP  GIDC   G+NDM+ Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+  P E
Sbjct:    7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDNVLVDINNPEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKEVLNAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIAQIKETGANLAICQWGFDDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVREISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538

[Close]

BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum OX=44689 GN=cct5 PE=3 SV=1)

HSP 1 Score: 727.628 bits (1877), Expect = 0.000e+0
Identity = 355/530 (66.98%), Postives = 438/530 (82.64%), Query Frame = 1

Query:    1 MALAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVI 1590
            M+L FDE+G PFI++++Q+ K RLRG++A +S+I A K ++ I+++SLGPKGMDKM+ S DG+V +TNDGATILE M VDNQIAKLMV+LS+SQD EIGDGTTGVVVLAG+LLE+AE+L+E+GIHP RI EGYE A +IA EHL+ +++  EF   N+EPLI+T MT L SKIVNR  R ++EIAVKAV++VADLERKDVNL+ IK+EGK GGKLEDT+L+ GI++DK +SHPQMPK I+DAKI +LTCPFEPPKPKTK+ ++I   E F+ L   EQKYF DMV+K K  GA LVICQWGFDDEANHLL+  NLPAVRWVGG++LE IA+ATGGRIV RF+++S +KLG+AG+VRE  FGTT+DR L IE C N+ AVTIF+RGGNKMI+EE KRS+HDALCV RNLIR+  ++YGGGS+EI+C + + A AD    +EQYA+RAF DAL+AIP+ALAENSGL  IE+LS VKA QIK+ NP  GIDCN   TNDM+ Q+VF+TL GK QQ LLA QVVKMILKIDD+I
Sbjct:    1 MSLVFDEYGNPFIVIRDQQAKERLRGIEAHRSHILAAKTISNIMKSSLGPKGMDKMMVSQDGEVLVTNDGATILENMQVDNQIAKLMVQLSKSQDDEIGDGTTGVVVLAGSLLEQAEQLIEKGIHPCRIYEGYETACKIATEHLKTISDSIEFSKDNIEPLIKTAMTCLGSKIVNRFHRQMSEIAVKAVISVADLERKDVNLENIKLEGKEGGKLEDTQLVKGIIIDKGISHPQMPKIIKDAKICLLTCPFEPPKPKTKNSIEITKAEDFKVLGEIEQKYFTDMVEKVKATGANLVICQWGFDDEANHLLLQNNLPAVRWVGGLDLEKIAMATGGRIVARFEDVSADKLGRAGLVREVGFGTTQDRYLSIEDCPNTNAVTIFVRGGNKMIVEEAKRSIHDALCVTRNLIRDNRVIYGGGSSEISCGLKISAMADDIASIEQYAVRAFADALDAIPLALAENSGLPSIESLSTVKAMQIKEKNPRLGIDCNHRDTNDMKAQHVFDTLPGKTQQFLLANQVVKMILKIDDII 530

[Close]

BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans OX=6239 GN=cct-5 PE=2 SV=1)

HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0
Identity = 350/532 (65.79%), Postives = 437/532 (82.14%), Query Frame = 1

Query:    7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
            L FDE G+PFI+++EQE + R+ G++A KS+I A +AVA  LRTSLGP+G+DKML SPDGDVTITNDGATI+E+MDV + +AKLMVELS+SQD+EIGDGTTGVVVLAGALLE+AE+L++RGIHPI+IA+G+++A + A+E L+ +++KF  +  N E L++T  T+L SKIVNR  R  AEIAV AVL+VAD+E KDVN ++IK+EGKVGG+LEDT L+ GIV+DK MSHPQMPK++++AK+AILTCPFEPPKPKTKHK+DI + E F+ LR  E++ F+ M+++ K+ GATL ICQWGFDDEANHLL   +LPAVRWVGG E+EL+AIAT  RIVPRF ELS EKLG AG+VRE +FG  KDRML IE C N++AVTIF+RGGNKMII+E KR+LHDALCV RNL+R+  IVYGGGSAE+A +I V   ADR  G+EQYA RAF DALE+IPMALAENSGL PI+ LS +KA+QI+      GID    GTNDM+EQ V ETL+ K++Q+ LATQVV+MILKIDDV  P +
Sbjct:    8 LLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVE--NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQVKESGATLAICQWGFDDEANHLLQANDLPAVRWVGGPEIELLAIATNARIVPRFSELSKEKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDVRVPDD 537

The following BLAST results are available for this feature:

BLAST of rna-KK1_019940 vs. DB:Swiss

BLAST of rna-KK1_019940 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
TCPE_ARATH	0.000e+0	90.28	T-complex protein 1 subunit epsilon OS=Arabidopsis...	[more]
TCPE2_AVESA	0.000e+0	88.04	T-complex protein 1 subunit epsilon OS=Avena sativ...	[more]
TCPE1_AVESA	0.000e+0	87.66	T-complex protein 1 subunit epsilon OS=Avena sativ...	[more]
TCPE_MACFA	0.000e+0	69.92	T-complex protein 1 subunit epsilon OS=Macaca fasc...	[more]
TCPE_HUMAN	0.000e+0	69.92	T-complex protein 1 subunit epsilon OS=Homo sapien...	[more]
TCPE_PONAB	0.000e+0	69.55	T-complex protein 1 subunit epsilon OS=Pongo abeli...	[more]
TCPE_MOUSE	0.000e+0	69.55	T-complex protein 1 subunit epsilon OS=Mus musculu...	[more]
TCPE_RAT	0.000e+0	69.36	T-complex protein 1 subunit epsilon OS=Rattus norv...	[more]
TCPE_DICDI	0.000e+0	66.98	T-complex protein 1 subunit epsilon OS=Dictyosteli...	[more]
TCPE_CAEEL	0.000e+0	65.79	T-complex protein 1 subunit epsilon OS=Caenorhabdi...	[more]

InterPro

Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 64..82 score: 37.32 coord: 414..426 score: 46.86 coord: 380..402 score: 34.74 coord: 94..113 score: 51.83 coord: 42..58 score: 42.23
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 152..412 e-value: 2.5E-184 score: 615.6
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 156..411
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 33..530 e-value: 2.5E-184 score: 615.6
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 21..531
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10		coord: 223..376 e-value: 2.5E-184 score: 615.6
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 217..385
None	No IPR available	TIGRFAM	TIGR02343	TIGR02343	coord: 3..532 e-value: 5.8E-300 score: 993.4
None	No IPR available	CDD	cd03339	TCP1_epsilon	coord: 6..531 e-value: 0.0 score: 1071.92
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 40..531 e-value: 7.0E-159 score: 529.6
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00995	TCP1_3	coord: 94..102
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00750	TCP1_1	coord: 45..57
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00751	TCP1_2	coord: 66..82

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_1-CM003603.1:1916043..1920242-
coding sequence from alignment at Chr_1-CM003603.1:1916043..1920242-

mRNA sequence

>rna-KK1_019940_Cc_Asha_v1.0 ID=rna-KK1_019940_Cc_Asha_v1.0; Name=rna-KK1_019940; organism=Cajanus cajan; type=mRNA; length=1608bp
ATGGCGTTGGCTTTCGACGAGTTCGGAAGGCCTTTCATAATCCTGAAGGA
GCAGGAACAGAAGAGTAGACTCAGAGGCTTAGACGCTCAGAAATCAAACA
TCTCCGCCGGCAAAGCCGTCGCTCGCATCCTCCGAACCTCCCTCGGCCCC
AAAGGCATGGACAAGATGCTCCAAAGCCCCGACGGCGACGTCACAATAAC
GAACGATGGCGCCACGATTCTCGAGCAGATGGACGTGGACAACCAAATCG
CGAAGCTGATGGTGGAGCTTTCGAGGAGTCAGGACTACGAAATCGGCGAC
GGCACCACCGGCGTCGTCGTCCTCGCCGGCGCGCTTCTCGAGAAGGCGGA
GCGCCTCCTCGAGCGCGGAATTCACCCCATCAGGATCGCCGAGGGTTACG
AAATGGCGTCGAGGATCGCCGTCGAACACCTCGAGCGCGTCGCCAACAAG
TTCGAGTTTGATGACACCAATTTGGAGCCTCTCATTCAAACTTGCATGAC
CACCCTCTCCTCAAAGATTGTGAATCGGTGCAAGCGTAGCTTGGCTGAGA
TCGCTGTGAAGGCGGTTCTCGCTGTTGCTGATCTGGAGAGGAAGGATGTT
AATTTGGATCTGATTAAAGTGGAAGGGAAAGTTGGTGGGAAGTTGGAGGA
TACTGAGTTGATTTATGGCATTGTTGTTGATAAGGATATGAGTCATCCCC
AGATGCCTAAGCAGATTGAGGATGCTAAAATTGCTATCCTCACTTGCCCC
TTTGAGCCTCCCAAGCCAAAGACTAAGCATAAGGTTGATATCGATACGGT
GGAGAAGTTTCAGACGTTGAGGTTGCAGGAACAGAAGTATTTTGATGACA
TGGTTCAAAAGTGCAAGGATGTGGGTGCAACGCTGGTCATTTGCCAATGG
GGTTTTGACGACGAAGCAAATCATCTCCTAATGCACAGGAACTTGCCAGC
CGTCAGATGGGTTGGTGGTGTAGAGTTGGAATTGATAGCTATAGCAACAG
GTGGAAGAATTGTGCCTAGGTTCCAAGAGTTATCTACAGAAAAGTTGGGA
AAGGCTGGTATGGTTCGAGAAAAGTCATTTGGTACAACAAAAGACCGAAT
GCTATACATTGAACATTGTGCAAACTCAAGGGCTGTAACAATATTCATTC
GAGGAGGTAACAAAATGATCATAGAGGAGACAAAGCGCAGCCTTCACGAT
GCATTGTGTGTGGCTAGGAATCTTATTCGCAATAAGTCTATTGTATATGG
TGGTGGTTCAGCTGAGATTGCCTGCTCTATAGCTGTGGAGGCAGCTGCTG
ATAGATACCCTGGAGTAGAACAGTATGCTATTAGAGCATTTGGGGATGCT
TTGGAGGCCATCCCAATGGCCCTTGCTGAAAATAGTGGCCTCCAACCGAT
TGAAACATTATCCGCTGTCAAGGCTCAGCAAATAAAGGATAATAACCCTC
ACTTTGGCATTGATTGTAATGATGTTGGCACTAATGACATGCGTGAGCAA
AATGTCTTTGAAACTTTGATTGGAAAGCAGCAACAGCTCTTGCTCGCTAC
TCAAGTTGTCAAGATGATTCTGAAAATTGATGATGTCATTTCCCCATCTG
AGTACTGA

protein sequence of rna-KK1_019940_Cc_Asha_v1.0

>rna-KK1_019940_Cc_Asha_v1.0 ID=rna-KK1_019940_Cc_Asha_v1.0; Name=rna-KK1_019940_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=535bp
MALAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGP
KGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGD
GTTGVVVLAGALLEKAERLLERGIHPIRIAEGYEMASRIAVEHLERVANK
FEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDV
NLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCP
FEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLG
KAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHD
ALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDA
LEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQ
NVFETLIGKQQQLLLATQVVKMILKIDDVISPSEY

mRNA from alignment at Chr_1-CM003603.1:1916043..1920242-

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-KK1_019940_Cc_Asha_v1.0 ID=rna-KK1_019940_Cc_Asha_v1.0; Name=rna-KK1_019940; organism=Cajanus cajan; type=mRNA; length=4200bp; location=Sequence derived from: Chr_1-CM003603.1:1916043..1920242- (Cajanus cajan
ATGGCGTTGGCTTTCGACGAGTTCGGAAGGCCTTTCATAATCCTGAAGGA
GCAGGAACAGAAGAGTAGACTCAGAGGCTTAGACGCTCAGAAATCAAACA
TCTCCGCCGGCAAAGCCGTCGCTCGCATCCTCCGAACCTCCCTCGGCCCC
AAAGGCATGGACAAGATGCTCCAAAGCCCCGACGGCGACGTCACAATAAG
TAAGTTCCACTTCCACACGCGCACACTCGCACGTGCGACTCCATTTCCTC
ATTTTCGCTCTCTTATTCTGCAGCGAACGATGGCGCCACGATTCTCGAGC
AGATGGACGTGGACAACCAAATCGCGAAGCTGATGGTGGAGCTTTCGAGG
AGTCAGGACTACGAAATCGGCGACGGCACCACCGGCGTCGTCGTCCTCGC
CGGCGCGCTTCTCGAGAAGGCGGAGCGCCTCCTCGAGCGCGGAATTCACC
CCATCAGGATCGCCGAGGGTTACGAAATGGCGTCGAGGATCGCCGTCGAA
CACCTCGAGCGCGTCGCCAACAAGTTCGAGTTTGATGACACCAATTTGGA
GCCTCTCATTCAAACTTGCATGACCACCCTCTCCTCAAAGATGTAACTAC
TCTGATTAATTAATTAATTAATTGCTCGTTGCCCATTACTTGCCTAGTTA
ACTTGTAACTGCATTTTTTTTTGTTGCTTATGATTTGTTTTTTAATGTTG
TAGTGTGAATCGGTGCAAGCGTAGCTTGGCTGAGATCGCTGTGAAGGCGG
TTCTCGCTGTTGCTGATCTGGAGAGGAAGGATGTTAATTTGGATCTGATT
AAAGTGGAAGGGAAAGTTGGTGGGAAGTTGGAGGATACTGAGTTGATTTA
TGGCATTGTTGTTGATAAGGATATGAGTCATCCCCAGATGCCTAAGCAGA
TTGAGGATGCTAAAATTGCTATCCTCACTTGCCCCTTTGAGCCTCCCAAG
CCAAAGACTAAGCATAAGGTTGATATCGATACGGTGGAGAAGTTTCAGAC
GTTGAGGTTGCAGGAACAGAAGTATTTTGATGACATGGTTCAAAAGTGCA
AGGTGGGATGGATTTCGTTTAGCTTATTTTAATCTTCTAATTGAAATGCA
TGTTCAGTTTCTTTACTTTAGCGTGGTGTATAAACCTTTTTGGATTTAAG
TTCAAATTAGCCTGCTTGTGACCCGCTAGGCACCCTTTTTGTCTTGCTAG
AAATTAGAATGTGTTTGGGTTTATTGGAAGTGACATTGATTTGCAGGATG
TGGGTGCAACGCTGGTCATTTGCCAATGGGGTTTTGACGACGAAGCAAAT
CATCTCCTAATGCACAGGAACTTGCCAGCCGTCAGATGGGTTGGTGGTGT
AGAGTTGGAATTGATAGCTATAGCAACAGGTGTGTTTTAATTAAACTATG
TACGCTTGGAAAGTTTTTATATTTTCTGTGTAACTGTATATTATGTGGCT
TAATTGGCTCTGTATACATTCTTCTATGTCTATTGACAGAGCAATGATCG
ATTTGTGAATACAGGTGGAAGAATTGTGCCTAGGTTCCAAGAGTTATCTA
CAGAAAAGTTGGGAAAGGTATAGTTTTGCTCTTGATTTTCTTTTGGGGGT
TTTACGAGACATGCATTTCTTTTGCAGTTTGTTGTCATTTTTAAATCACA
TGCAATTGTGGGGTTTAGTATTTTAAAACATGTAGCAGGGGTAGCATTCT
TCTTCCTGTATACTTTGTTGGGGGTGGCATGTTGTGCACAAAAGATTCTC
ATAATTCTTTTGTTTGTAAATTTGACAGCAAGAAAAGCATCACTAATTTG
TGATCTATTTTTTTAGGCTGGTATGGTTCGAGAAAAGTCATTTGGTACAA
CAAAAGACCGAATGCTATACATTGAACATTGTGCAAACTCAAGGGCTGTA
ACAATATTCATTCGAGGAGGTAAAGCCATTCTGCTTGATTCCTTCATTTA
ACTGGTTTTCTTTGAATTTCTTGTAGTTAATTACCTTCTTGGAGGAAGAT
AATTTTCTATACTTACTGTTGATCAATATTGTATTTATTTCTTTATTTCT
TTATTGCTTTGGAGTGAGAATTATGAACCTTTAGGTTATGTTTAGATTGA
TGGTAAGAAGTGGGAGGTAATGGATTAAAGTGAAATGGAATATAATAGAA
TAAAATCTGCATTCCATTGTTGGGATATATTATGGTGGAACGGAATAGAA
TTTTATTCCTGTGCTGGATACTGAATGGAGAACAAATAATTATTTTTTAT
TGATATATTACCCTTATTTTAAAATACTAAAATGTTGTTTTTAATCGTCA
TTTGTTTTATTTATCTATAATCCCCACTCCCTGATAAAATAATTTCCTTT
TCCTTGTTTCCTATTTAATATCTCCCTTTTGGATAGTTGTCTGTGGTTAT
TTTATTTATTTATTTATTTTTATCATTCACAATTGGTTTGTTATTTCGAT
AACATGCTAGGCTGTTATATTTTTTAAGAAAAAATGGGTAGTTTAAAAGA
ACTCCACAGAATTGTAAATGTCCCTAACTAACACCCATAAACCATAGTGG
TAATGAGACACCATTTCAATCTGACGTTTCACCAAACACCTTCCTAACAT
TTTCAAAACCACCCCAAAACCCTGGAATAATTGTCTAAAAGAGCTGTTTG
CACAGCACAATTGGGTATTGCTTGAAACCAGATTTCAAGTTCTGCGCATG
CACCAAATCTGTGGCACTTGATTTCATGCACCCTTTCGGCATGTAAGGGT
ATATGAAGAGGTTTGGTTGTGTGGTTGGGATGTGAAGCATGTGGCATTAC
TGCAGTAGAGGGTGAAGGTGGAAAGGTAGGTGATAGGATGAAAGCAAAGG
CGGTGGTCATGGGGACACAGTATAATCTAGATGTTGGGAGAGTGGATGTG
ACGTAGTGTGCTGAAGTAGGCTTGGAGTTGCTGGAGATGGTTCAGGTGAT
TACTATTGCTCAATGACGTTACAGTGATATCATAATTAAAAAGAACAAAT
CAATTGTGTGCTCTATGCCATACTCTCGAATTTGGGGGTAAGAAACTGAT
GGGAACACCGAACAGATGGAATAGGTTCCATCACTTACTATTCTATACTG
TTGAAGAGAAGGAAAGAGAGGCATGTGAGTAAACAGTAAAAAAATGCACT
GCAATGTGTGGTGACCCTTCTATTTATATTTTTAAGTAATGTACATAAAA
GCATGTCGGTTTTCCCATACACATACAACTAAGTACTAAACCCTTTATTA
TAATAACATTTGTTTTTCAATCCAAACAATGGATCTCAAATATTGCTTGG
TTTGGCTTTGCAGTTATTAAGTTATGTATTTTTTGTGGAGTTTTTGATAT
TGACTTTGAAGACTGGTAAGTTGTCTAAGCAAACCTTGACAAATTAATAG
TAGCTGTCTTGTTTGGCAGGTAACAAAATGATCATAGAGGAGACAAAGCG
CAGCCTTCACGATGCATTGTGTGTGGCTAGGAATCTTATTCGCAATAAGT
CTATTGTATATGGTGGTGGTTCAGCTGAGATTGCCTGCTCTATAGCTGTG
GAGGCAGCTGCTGATAGATACCCTGGAGTAGAACAGGTATGGATATCATT
GAACTCACGTGGTATTAATTTTTATTGCTTGTTAGAATAAACAGTTTTTA
TATCTTAAGCTAATCTAATGATCCCACCTGTTTAAAGTAGCTATTTAAAG
TCACCGTTATTCACTGATAGTGCATTGAGGTGATAGTGTGTTATTTACAA
TGGATCAAATGTAATATCAATGCTTAAACTAACAATTTCTACGTATGCTT
ATTGATTACTTTTTCTTCGCTTGCAGTATGCTATTAGAGCATTTGGGGAT
GCTTTGGAGGCCATCCCAATGGCCCTTGCTGAAAATAGTGGCCTCCAACC
GATTGAAACATTATCCGCTGTCAAGGCTCAGCAAATAAAGGTAATAAATC
GATCGTGATGATTGTTTTGACCATGTTAAACATCTATTACTTGTATATTA
TGGCGCTGACCTCAAAACTCTGCCTTCAGGATAATAACCCTCACTTTGGC
ATTGATTGTAATGATGTTGGCACTAATGACATGCGTGAGCAAAATGTCTT
TGAAACTTTGATTGGAAAGCAGCAACAGCTCTTGCTCGCTACTCAAGTTG
TCAAGATGATTCTGAAAATTGATGATGTCATTTCCCCATCTGAGTACTGA

Coding sequence (CDS) from alignment at Chr_1-CM003603.1:1916043..1920242-

>rna-KK1_019940_Cc_Asha_v1.0 ID=rna-KK1_019940_Cc_Asha_v1.0; Name=rna-KK1_019940; organism=Cajanus cajan; type=CDS; length=3216bp; location=Sequence derived from: Chr_1-CM003603.1:1916043..1920242- (Cajanus cajan
ATGGCGTTGGCTTTCGACGAGTTCGGAAGGCCTTTCATAATCCTGAAGGA
GCAGGAACAGAAGAGTAGACTCAGAGGCTTAGACGCTCAGAAATCAAACA
TCTCCGCCGGCAAAGCCGTCGCTCGCATCCTCCGAACCTCCCTCGGCCCC
AAAGGCATGGACAAGATGCTCCAAAGCCCCGACGGCGACGTCACAATAAA
TGGCGTTGGCTTTCGACGAGTTCGGAAGGCCTTTCATAATCCTGAAGGAG
CAGGAACAGAAGAGTAGACTCAGAGGCTTAGACGCTCAGAAATCAAACAT
CTCCGCCGGCAAAGCCGTCGCTCGCATCCTCCGAACCTCCCTCGGCCCCA
AAGGCATGGACAAGATGCTCCAAAGCCCCGACGGCGACGTCACAATAACG
AACGATGGCGCCACGATTCTCGAGCAGATGGACGTGGACAACCAAATCGC
GAAGCTGATGGTGGAGCTTTCGAGGAGTCAGGACTACGAAATCGGCGACG
GCACCACCGGCGTCGTCGTCCTCGCCGGCGCGCTTCTCGAGAAGGCGGAG
CGCCTCCTCGAGCGCGGAATTCACCCCATCAGGATCGCCGAGGGTTACGA
AATGGCGTCGAGGATCGCCGTCGAACACCTCGAGCGCGTCGCCAACAAGT
TCGAGTTTGATGACACCAATTTGGAGCCTCTCATTCAAACTTGCATGACC
ACCCTCTCCTCAAAGATCGAACGATGGCGCCACGATTCTCGAGCAGATGG
ACGTGGACAACCAAATCGCGAAGCTGATGGTGGAGCTTTCGAGGAGTCAG
GACTACGAAATCGGCGACGGCACCACCGGCGTCGTCGTCCTCGCCGGCGC
GCTTCTCGAGAAGGCGGAGCGCCTCCTCGAGCGCGGAATTCACCCCATCA
GGATCGCCGAGGGTTACGAAATGGCGTCGAGGATCGCCGTCGAACACCTC
GAGCGCGTCGCCAACAAGTTCGAGTTTGATGACACCAATTTGGAGCCTCT
CATTCAAACTTGCATGACCACCCTCTCCTCAAAGATTGTGAATCGGTGCA
AGCGTAGCTTGGCTGAGATCGCTGTGAAGGCGGTTCTCGCTGTTGCTGAT
CTGGAGAGGAAGGATGTTAATTTGGATCTGATTAAAGTGGAAGGGAAAGT
TGGTGGGAAGTTGGAGGATACTGAGTTGATTTATGGCATTGTTGTTGATA
AGGATATGAGTCATCCCCAGATGCCTAAGCAGATTGAGGATGCTAAAATT
GCTATCCTCACTTGCCCCTTTGAGCCTCCCAAGCCAAAGACTAAGCATAA
GGTTGATATCGATACGGTGGAGAAGTTTCAGACGTTGAGGTTGCAGGAAC
AGAAGTATTTTGATGACATGGTTCAAAAGTGCAAGTGTGAATCGGTGCAA
GCGTAGCTTGGCTGAGATCGCTGTGAAGGCGGTTCTCGCTGTTGCTGATC
TGGAGAGGAAGGATGTTAATTTGGATCTGATTAAAGTGGAAGGGAAAGTT
GGTGGGAAGTTGGAGGATACTGAGTTGATTTATGGCATTGTTGTTGATAA
GGATATGAGTCATCCCCAGATGCCTAAGCAGATTGAGGATGCTAAAATTG
CTATCCTCACTTGCCCCTTTGAGCCTCCCAAGCCAAAGACTAAGCATAAG
GTTGATATCGATACGGTGGAGAAGTTTCAGACGTTGAGGTTGCAGGAACA
GAAGTATTTTGATGACATGGTTCAAAAGTGCAAGGATGTGGGTGCAACGC
TGGTCATTTGCCAATGGGGTTTTGACGACGAAGCAAATCATCTCCTAATG
CACAGGAACTTGCCAGCCGTCAGATGGGTTGGTGGTGTAGAGTTGGAATT
GATAGCTATAGCAACAGGATGTGGGTGCAACGCTGGTCATTTGCCAATGG
GGTTTTGACGACGAAGCAAATCATCTCCTAATGCACAGGAACTTGCCAGC
CGTCAGATGGGTTGGTGGTGTAGAGTTGGAATTGATAGCTATAGCAACAG
GTGGAAGAATTGTGCCTAGGTTCCAAGAGTTATCTACAGAAAAGTTGGGA
AAGGTGGAAGAATTGTGCCTAGGTTCCAAGAGTTATCTACAGAAAAGTTG
GGAAAGGCTGGTATGGTTCGAGAAAAGTCATTTGGTACAACAAAAGACCG
AATGCTATACATTGAACATTGTGCAAACTCAAGGGCTGTAACAATATTCA
TTCGAGGAGGCTGGTATGGTTCGAGAAAAGTCATTTGGTACAACAAAAGA
CCGAATGCTATACATTGAACATTGTGCAAACTCAAGGGCTGTAACAATAT
TCATTCGAGGAGGTAACAAAATGATCATAGAGGAGACAAAGCGCAGCCTT
CACGATGCATTGTGTGTGGCTAGGAATCTTATTCGCAATAAGTCTATTGT
ATATGGTGGTGGTTCAGCTGAGATTGCCTGCTCTATAGCTGTGGAGGCAG
CTGCTGATAGATACCCTGGAGTAGAACAGGTAACAAAATGATCATAGAGG
AGACAAAGCGCAGCCTTCACGATGCATTGTGTGTGGCTAGGAATCTTATT
CGCAATAAGTCTATTGTATATGGTGGTGGTTCAGCTGAGATTGCCTGCTC
TATAGCTGTGGAGGCAGCTGCTGATAGATACCCTGGAGTAGAACAGTATG
CTATTAGAGCATTTGGGGATGCTTTGGAGGCCATCCCAATGGCCCTTGCT
GAAAATAGTGGCCTCCAACCGATTGAAACATTATCCGCTGTCAAGGCTCA
GCAAATAAAGTATGCTATTAGAGCATTTGGGGATGCTTTGGAGGCCATCC
CAATGGCCCTTGCTGAAAATAGTGGCCTCCAACCGATTGAAACATTATCC
GCTGTCAAGGCTCAGCAAATAAAGGATAATAACCCTCACTTTGGCATTGA
TTGTAATGATGTTGGCACTAATGACATGCGTGAGCAAAATGTCTTTGAAA
CTTTGATTGGAAAGCAGCAACAGCTCTTGCTCGCTACTCAAGTTGTCAAG
ATGATTCTGAAAATTGATGATGTCATTTCCCCATCTGAGTACTGAGATAA
TAACCCTCACTTTGGCATTGATTGTAATGATGTTGGCACTAATGACATGC
GTGAGCAAAATGTCTTTGAAACTTTGATTGGAAAGCAGCAACAGCTCTTG
CTCGCTACTCAAGTTGTCAAGATGATTCTGAAAATTGATGATGTCATTTC
CCCATCTGAGTACTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR017998	Chaperone_TCP-1
IPR027410	TCP-1-like_intermed_sf
IPR027413	GROEL-like_equatorial_sf
IPR027409	GroEL-like_apical_dom_sf
IPR002423	Cpn60/GroEL/TCP-1
IPR002194	Chaperonin_TCP-1_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0051082	unfolded protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

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