rna-KK1_019940
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=CCT5 PE=1 SV=1) HSP 1 Score: 989.178 bits (2556), Expect = 0.000e+0 Identity = 483/535 (90.28%), Postives = 522/535 (97.57%), Query Frame = 1 Query: 1 MALAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSEY 1605
MALAFDEFGRPFIIL+EQ+QK+RLRG+DAQK+NI+AGKAVARILR+SLGPKGMDKMLQ PDGD+TITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVV+AGALLE+AER L+RGIHPIRIAEGYEMASR+AVEHLER+A KFEFD N EPL+QTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLER+DVNLDLIKVEGKVGGKLEDTELIYGI++DKDMSHPQMPKQIEDA IAILTCPFEPPKPKTKHKVDIDTVEKF+TLR QEQ+YFD+MVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQEL+ EKLGKAG+VREKSFGTTK+RMLYIEHCANS+AVT+FIRGGNKM+IEETKRS+HDALCVARNLIRNKSIVYGGG+AEIACS+AV+AAAD+YPGVEQYAIRAF +AL+++PMALAENSGLQPIETLSAVK+QQIK+N P +GIDCNDVGTNDMREQNVFETLIGKQQQ+LLATQVVKMILKIDDVIS SEY
Sbjct: 1 MALAFDEFGRPFIILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQIEDAHIAILTCPFEPPKPKTKHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGVVREKSFGTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGAAEIACSLAVDAAADKYPGVEQYAIRAFAEALDSVPMALAENSGLQPIETLSAVKSQQIKENIPFYGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISNSEY 535
BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1) HSP 1 Score: 956.051 bits (2470), Expect = 0.000e+0 Identity = 471/535 (88.04%), Postives = 513/535 (95.89%), Query Frame = 1 Query: 1 MALAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSEY 1605
MAL FDE+ RPFIIL+EQE+KSRL+GLDAQK+NI+AGK+VARILRTSLGPKGMDKMLQSPDGDVTITNDGATILE MDVDNQIAKLMVELSRSQDY+IGDGTTGVVV+AG+LLE+AE+LLERGIHPIR+AEGYEMASRIAV+HLE ++ K+EF T++EPL+QTCMTTLSSKIV+RCKR+LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTEL+ GI+VDKDMSHPQMPK+IEDA IAILTCPFEPPKPKTKHKVDIDTVEKFQTLR QEQKYFD+MVQKCKDVGATLVICQWGFDDEANHLLM R LPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAG+VREKSFGTTKDRMLYIE CANS+AVTIFIRGGNKM+IEETKRS+HDALCVARNLI N SIVYGGGSAEI+CSIAVEAAADR+PGVEQYAIRAF DAL+AIP+ALAENSGL PI+TL+ VK+Q +K+NN GIDCNDVGTNDM+EQNVFETLIGKQQQ+LLATQVVKMILKIDDVI+PSEY
Sbjct: 1 MALDFDEYWRPFIILREQEKKSRLQGLDAQKANIAAGKSVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLMVELSRSQDYDIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRALAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVQGIIVDKDMSHPQMPKRIEDAHIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQWGFDDEANHLLMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSFGTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVITPSEY 535
BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1) HSP 1 Score: 931.398 bits (2406), Expect = 0.000e+0 Identity = 469/535 (87.66%), Postives = 512/535 (95.70%), Query Frame = 1 Query: 1 MALAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSEY 1605
MALAFDE+GRPFIIL+EQE+KSRL+GLDA K+NI+A KA+ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILE MDVDNQIAKL+VELSRSQDY+IGDGTTGVVV+AGALLE+AE+LLERGIHPIR+AEGYEMASRIAV+HLE ++ K+EF T++EPL+QTCMTTLSSKIV+RCKR+LAEI+VKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTEL+ GI+VDKDMSHPQMPK+I DA IAILTCPFEPPKPKTKHKVDIDTVEKFQTLR QEQKYFD+MVQKCKDVGATLVICQWGFDDEANHLLM R LPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAG+VREKSFGTTKDRMLYIE CANS+AVTIFIRGGNKM+IEETKRS+HDALCVARNLI N SIVYGGGSAEI+CSIAVEAAADR+PGVEQYAIRAF DAL+AIP+ALAENSGL PI+TL+ VK+Q +K+NN GIDCNDVGTNDM+EQNVFETLIGKQQQ+LLATQVVKMILKIDDVI+PSEY
Sbjct: 1 MALAFDEYGRPFIILREQEKKSRLQGLDAHKANIAAAKAIARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLLVELSRSQDYDIGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRALAEISVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVEGIIVDKDMSHPQMPKRIYDAHIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQWGFDDEANHLLMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSFGTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVITPSEY 535
BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis OX=9541 GN=CCT5 PE=2 SV=1) HSP 1 Score: 763.837 bits (1971), Expect = 0.000e+0 Identity = 372/532 (69.92%), Postives = 456/532 (85.71%), Query Frame = 1 Query: 7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
LAFDE+GRPF+I+K+Q++KSRL GL+A KS+I A KAVA +RTSLGP G+DKM+ DGDVT+TNDGATIL MDVD+QIAKLMVELS+SQD EIGDGTTGVVVLAGALLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL+++++ D + EPLIQT TTL SK+VN C R +AEIAV AVL VAD+ER+DV+ +LIKVEGKVGG+LEDT+LI G++VDKD SHPQMPK++EDAKIAILTCPFEPPKPKTKHK+D+ +VE ++ L+ E++ F++M+Q+ K+ GA L ICQWGFDDEANHLL+ NLPAVRWVGG E+ELIAIATGGRIVPRF EL+ EKLG AG+V+E SFGTTKD+ML IE C NSRAVTIFIRGGNKMIIEE KRSLHDALCV RNLIR+ +VYGGG+AEI+C++AV AD+ P +EQYA+RAF DALE IPMAL+ENSG+ PI+T++ V+A+Q+K+ NP GIDC GTNDM++Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+ P E
Sbjct: 7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens OX=9606 GN=CCT5 PE=1 SV=1) HSP 1 Score: 763.837 bits (1971), Expect = 0.000e+0 Identity = 372/532 (69.92%), Postives = 456/532 (85.71%), Query Frame = 1 Query: 7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
LAFDE+GRPF+I+K+Q++KSRL GL+A KS+I A KAVA +RTSLGP G+DKM+ DGDVT+TNDGATIL MDVD+QIAKLMVELS+SQD EIGDGTTGVVVLAGALLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL+++++ D + EPLIQT TTL SK+VN C R +AEIAV AVL VAD+ER+DV+ +LIKVEGKVGG+LEDT+LI G++VDKD SHPQMPK++EDAKIAILTCPFEPPKPKTKHK+D+ +VE ++ L+ E++ F++M+Q+ K+ GA L ICQWGFDDEANHLL+ NLPAVRWVGG E+ELIAIATGGRIVPRF EL+ EKLG AG+V+E SFGTTKD+ML IE C NSRAVTIFIRGGNKMIIEE KRSLHDALCV RNLIR+ +VYGGG+AEI+C++AV AD+ P +EQYA+RAF DALE IPMAL+ENSG+ PI+T++ V+A+Q+K+ NP GIDC GTNDM++Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+ P E
Sbjct: 7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii OX=9601 GN=CCT5 PE=2 SV=1) HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0 Identity = 370/532 (69.55%), Postives = 455/532 (85.53%), Query Frame = 1 Query: 7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
LAFDE+GRPF+I+K+Q++KSRL GL+A KS+I A KAVA +RTSLGP G+DKM+ DGDVT+TNDGATIL MDVD+QIAKLMVELS+SQD EIGDGTTGVVVLAGALLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL+++++ D + EPLIQT TTL SK+VN C R +AEIAV AVL VAD+ER+DV+ +LIKVEGKVGG+LEDT+LI G++VDKD SHP+MPK++EDAKIAILTCPFEPPKPKTKHK+D+ +VE ++ L+ E++ F++M+Q+ K+ GA L ICQWGFDDEANHLL+ NLPAVRWVGG E+ELIAIATGGRIVPRF EL+ EKLG AG+V+E SFGTTKD+ML IE C NSRAVTIFIRGGNKMIIEE KRSLHDALCV RNLIR+ +VYGGG+AE +C++AV AD+ P +EQYA+RAF DALE IPMAL+ENSG+ PI+T++ V+A+Q+K+ NP GIDC GTNDM++Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+ P E
Sbjct: 7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPRMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAETSCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus OX=10090 GN=Cct5 PE=1 SV=1) HSP 1 Score: 756.133 bits (1951), Expect = 0.000e+0 Identity = 370/532 (69.55%), Postives = 456/532 (85.71%), Query Frame = 1 Query: 7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
LAFDE+GRPF+I+K+Q++KSRL GL+A KS+I A KAVA +RTSLGP G+DKM+ DGDVTITNDGATIL MDVD+QIAKLMVELS+SQD EIGDGTTGVVVLAGALLE+AE+LL+RGIHPIRIA+GYE A+RIA++HL+++++K D N EPLIQT TTL SK++N C R +AEIAV AVL VAD+ER+DV+ +LIKVEGKVGG+LEDT+LI G++VDKD SHPQMPK++ DAKIAILTCPFEPPKPKTKHK+D+ +VE ++ L+ E++ F++M+++ K+ GA L ICQWGFDDEANHLL+ LPAVRWVGG E+ELIAIATGGRIVPRF EL++EKLG AG+V+E SFGTTKD+ML IE C NSRAVTIFIRGGNKMIIEE KRSLHDALCV RNLIR+ +VYGGG+AEI+C++AV AD+ P +EQYA+RAF DALE IPMAL+ENSG+ PI+T++ V+A+Q+K++NP GIDC G+NDM+ Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+ P E
Sbjct: 7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDKVLVDINNPEPLIQTAKTTLGSKVINSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVVDAKIAILTCPFEPPKPKTKHKLDVMSVEDYKALQKYEKEKFEEMIKQIKETGANLAICQWGFDDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVQEISFGTTKDKMLVIEKCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1) HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0 Identity = 369/532 (69.36%), Postives = 454/532 (85.34%), Query Frame = 1 Query: 7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
LAFDE+GRPF+I+K+Q++KSRL GL+A KS+I A KAVA +RTSLGP G+DKM+ DGDVT+TNDGATIL MDVD+QIAKLMVELS+SQD EIGDGTTGVVVLAGALLE+AE+LL+RGIHPIRIA+GYE A+RIA++HL+++++ D N EPLIQT TTL SK+VN C R +AEIAV AVL VAD+ER+DV+ +LIKVEGKVGG+LEDT+LI G++VDKD SHPQMPK++ +AKIAILTCPFEPPKPKTKHK+D+ +VE ++ L+ E++ F++M+ + K+ GA L ICQWGFDDEANHLL+ LPAVRWVGG E+ELIAIATGGRIVPRF EL++EKLG AG+VRE SFGTTKD+ML IE C NSRAVTIFIRGGNKMIIEE KRSLHDALCV RNLIR+ +VYGGG+AEI+C++AV AD+ P +EQYA+RAF DALE IPMAL+ENSG+ PI+T++ V+A+Q+K++NP GIDC G+NDM+ Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+ P E
Sbjct: 7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDNVLVDINNPEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKEVLNAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIAQIKETGANLAICQWGFDDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVREISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum OX=44689 GN=cct5 PE=3 SV=1) HSP 1 Score: 727.628 bits (1877), Expect = 0.000e+0 Identity = 355/530 (66.98%), Postives = 438/530 (82.64%), Query Frame = 1 Query: 1 MALAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVI 1590
M+L FDE+G PFI++++Q+ K RLRG++A +S+I A K ++ I+++SLGPKGMDKM+ S DG+V +TNDGATILE M VDNQIAKLMV+LS+SQD EIGDGTTGVVVLAG+LLE+AE+L+E+GIHP RI EGYE A +IA EHL+ +++ EF N+EPLI+T MT L SKIVNR R ++EIAVKAV++VADLERKDVNL+ IK+EGK GGKLEDT+L+ GI++DK +SHPQMPK I+DAKI +LTCPFEPPKPKTK+ ++I E F+ L EQKYF DMV+K K GA LVICQWGFDDEANHLL+ NLPAVRWVGG++LE IA+ATGGRIV RF+++S +KLG+AG+VRE FGTT+DR L IE C N+ AVTIF+RGGNKMI+EE KRS+HDALCV RNLIR+ ++YGGGS+EI+C + + A AD +EQYA+RAF DAL+AIP+ALAENSGL IE+LS VKA QIK+ NP GIDCN TNDM+ Q+VF+TL GK QQ LLA QVVKMILKIDD+I
Sbjct: 1 MSLVFDEYGNPFIVIRDQQAKERLRGIEAHRSHILAAKTISNIMKSSLGPKGMDKMMVSQDGEVLVTNDGATILENMQVDNQIAKLMVQLSKSQDDEIGDGTTGVVVLAGSLLEQAEQLIEKGIHPCRIYEGYETACKIATEHLKTISDSIEFSKDNIEPLIKTAMTCLGSKIVNRFHRQMSEIAVKAVISVADLERKDVNLENIKLEGKEGGKLEDTQLVKGIIIDKGISHPQMPKIIKDAKICLLTCPFEPPKPKTKNSIEITKAEDFKVLGEIEQKYFTDMVEKVKATGANLVICQWGFDDEANHLLLQNNLPAVRWVGGLDLEKIAMATGGRIVARFEDVSADKLGRAGLVREVGFGTTQDRYLSIEDCPNTNAVTIFVRGGNKMIVEEAKRSIHDALCVTRNLIRDNRVIYGGGSSEISCGLKISAMADDIASIEQYAVRAFADALDAIPLALAENSGLPSIESLSTVKAMQIKEKNPRLGIDCNHRDTNDMKAQHVFDTLPGKTQQFLLANQVVKMILKIDDII 530
BLAST of rna-KK1_019940 vs. DB:Swiss
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans OX=6239 GN=cct-5 PE=2 SV=1) HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0 Identity = 350/532 (65.79%), Postives = 437/532 (82.14%), Query Frame = 1 Query: 7 LAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVXXXXXXXXXXXXXXXXIHPIRIAEGYEMASRIAVEHLERVANKFEFDDTNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNKSIVYGGGSAEIACSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKAQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSE 1602
L FDE G+PFI+++EQE + R+ G++A KS+I A +AVA LRTSLGP+G+DKML SPDGDVTITNDGATI+E+MDV + +AKLMVELS+SQD+EIGDGTTGVVVLAGALLE+AE+L++RGIHPI+IA+G+++A + A+E L+ +++KF + N E L++T T+L SKIVNR R AEIAV AVL+VAD+E KDVN ++IK+EGKVGG+LEDT L+ GIV+DK MSHPQMPK++++AK+AILTCPFEPPKPKTKHK+DI + E F+ LR E++ F+ M+++ K+ GATL ICQWGFDDEANHLL +LPAVRWVGG E+EL+AIAT RIVPRF ELS EKLG AG+VRE +FG KDRML IE C N++AVTIF+RGGNKMII+E KR+LHDALCV RNL+R+ IVYGGGSAE+A +I V ADR G+EQYA RAF DALE+IPMALAENSGL PI+ LS +KA+QI+ GID GTNDM+EQ V ETL+ K++Q+ LATQVV+MILKIDDV P +
Sbjct: 8 LLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVE--NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQVKESGATLAICQWGFDDEANHLLQANDLPAVRWVGGPEIELLAIATNARIVPRFSELSKEKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDVRVPDD 537 The following BLAST results are available for this feature:
BLAST of rna-KK1_019940 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-KK1_019940_Cc_Asha_v1.0 ID=rna-KK1_019940_Cc_Asha_v1.0; Name=rna-KK1_019940; organism=Cajanus cajan; type=mRNA; length=1608bpback to top protein sequence of rna-KK1_019940_Cc_Asha_v1.0 >rna-KK1_019940_Cc_Asha_v1.0 ID=rna-KK1_019940_Cc_Asha_v1.0; Name=rna-KK1_019940_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=535bpback to top mRNA from alignment at Chr_1-CM003603.1:1916043..1920242- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-KK1_019940_Cc_Asha_v1.0 ID=rna-KK1_019940_Cc_Asha_v1.0; Name=rna-KK1_019940; organism=Cajanus cajan; type=mRNA; length=4200bp; location=Sequence derived from: Chr_1-CM003603.1:1916043..1920242- (Cajanus cajanback to top Coding sequence (CDS) from alignment at Chr_1-CM003603.1:1916043..1920242- >rna-KK1_019940_Cc_Asha_v1.0 ID=rna-KK1_019940_Cc_Asha_v1.0; Name=rna-KK1_019940; organism=Cajanus cajan; type=CDS; length=3216bp; location=Sequence derived from: Chr_1-CM003603.1:1916043..1920242- (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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