Vigun08g212000.1

Transcript Overview
NameVigun08g212000.1
Unique NameVigun08g212000.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2545
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:37346619..37349568 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL346Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL166Pisum sativum Cameor genome v1aPisum sativum
crvuL191Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL557Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL701Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL135Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0194Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0770Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0814Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0195Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0636Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1011Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1203Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL199Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL706Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR570Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR596Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL088Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL081Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL286Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL267Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL081Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL447Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL383Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL828Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR389Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR398Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL128Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL120Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL598Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL138Cicer arietinum
carvuL386Cicer arietinum
ccavuL423Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL658Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR678Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR693Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvuL287Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL435Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL438Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL301Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL459Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL481Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL616Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR447Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr08.817Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.05G197800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
PvulFLAVERTChr06.1287Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_21510.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.006G059218.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.03G011200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_03G00132.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.03G016400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Tiffany.R1.2g040920.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_006117Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.2g050040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_19123Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigst.05G149200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_014663511.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan07g009900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vum_05G01568.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va07G002320.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat05G0468700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr08.1749Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_12664.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
jg51224.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.008G280900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_028452Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014647255.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_11623Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va09G036470.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan09g093200Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun08g212000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun06g065700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun06g065700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g212000Vigun08g212000_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g212000.1Vigun08g212000.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun08g212000.1_Vu_IT97K-499-35_v1.1Vigun08g212000.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g212000.1.v1.1.five_prime_UTR.1Vigun08g212000.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g212000.1.v1.1.CDS.1Vigun08g212000.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g212000.1.v1.1.CDS.2Vigun08g212000.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g212000.1.v1.1.three_prime_UTR.1Vigun08g212000.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun08g212000.1 vs. DB:Swiss
Match: TM245_HUMAN (Transmembrane protein 245 OS=Homo sapiens OX=9606 GN=TMEM245 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 4.115e-13
Identity = 56/206 (27.18%), Postives = 109/206 (52.91%), Query Frame = 1 
Query: 1279 SGAAEVFNFVSQTMVFFWVLYYLITS--ESGGVTEQMMHMVPISNSAKIRCV--EVLDKAISGVLLATPEISFFQGCLTWLLFRLYRIHFLYVSTVFAFISPFIPILPSWLSTIPATIQLVL-EGRYIVAIFLSVTHLFLLDYGATEILEDVP-GQSAYLTGMSIIGGIALFPSAIEGAIMGPLITTVMIALKDLYAEFVLGERDD 1878
            SG A + NFV   ++F   L+YL++S  E     + ++ + P+S       +  + +++AI GV  A+ +++ F G  TWL   ++ I+ +++ +  A I   +P L ++ + +PA + L L +G    AI L + HL    +  T I  D+  G   YLTG+++ GG       +EGAI+GP++  +++   ++Y+  ++   + 
Sbjct:  648 SGTA-LLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAIIGPILLCILVVASNIYSAMLVSPTNS 850
[Close]
BLAST of Vigun08g212000.1 vs. DB:Swiss
Match: TM245_MOUSE (Transmembrane protein 245 OS=Mus musculus OX=10090 GN=Tmem245 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.924e-13
Identity = 57/206 (27.67%), Postives = 109/206 (52.91%), Query Frame = 1 
Query: 1279 SGAAEVFNFVSQTMVFFWVLYYLITS--ESGGVTEQMMHMVPISNSAKIRCV--EVLDKAISGVLLATPEISFFQGCLTWLLFRLYRIHFLYVSTVFAFISPFIPILPSWLSTIPATIQLVL-EGRYIVAIFLSVTHLFLLDYGATEILEDVP-GQSAYLTGMSIIGGIALFPSAIEGAIMGPLITTVMIALKDLYAEFVLGERDD 1878
            SG A + NFV   ++F   L+YL++S  E     + ++ + P+S       +  + +++AI GV  A+ +++ F G  TWL   ++ I+ +++ +  A I   +P L ++ + +PA + L L +G    AI L V HL    +  T I  D+  G   YLTG+++ GG       +EGAI+GP++  +++   ++Y+  ++   + 
Sbjct:  645 SGTA-LLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAIIGPILLCILVVASNIYSAMLVSPTNS 847
[Close]
BLAST of Vigun08g212000.1 vs. DB:Swiss
Match: TM245_RAT (Transmembrane protein 245 OS=Rattus norvegicus OX=10116 GN=Tmem245 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.401e-13
Identity = 56/206 (27.18%), Postives = 109/206 (52.91%), Query Frame = 1 
Query: 1279 SGAAEVFNFVSQTMVFFWVLYYLITS--ESGGVTEQMMHMVPISNSAKIRCV--EVLDKAISGVLLATPEISFFQGCLTWLLFRLYRIHFLYVSTVFAFISPFIPILPSWLSTIPATIQLVL-EGRYIVAIFLSVTHLFLLDYGATEILEDVP-GQSAYLTGMSIIGGIALFPSAIEGAIMGPLITTVMIALKDLYAEFVLGERDD 1878
            SG A + NFV   ++F   L+YL++S  E     + ++ + P+S       +  + +++AI GV  A+ +++ F G  TWL   ++ I+ +++ +  A I   +P L ++ + +PA + L L +G    A+ L V HL    +  T I  D+  G   YLTG+++ GG       +EGAI+GP++  +++   ++Y+  ++   + 
Sbjct:  645 SGTA-LLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRGVFDASLKMAGFYGLYTWLTHTVFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAVLLLVFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAIIGPILLCILVVASNIYSAMLVSPTNS 847
[Close]
BLAST of Vigun08g212000.1 vs. DB:Swiss
Match: TM245_BOVIN (Transmembrane protein 245 OS=Bos taurus OX=9913 GN=TMEM245 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.619e-12
Identity = 62/231 (26.84%), Postives = 118/231 (51.08%), Query Frame = 1 
Query: 1228 VLGSGAKFVFSILNSIV-----SGAAEVFNFVSQTMVFFWVLYYLITS--ESGGVTEQMMHMVPISN---SAKI--RCVEVLDKAISGVLLATPEISFFQGCLTWLLFRLYRIHFLYVSTVFAFISPFIPILPSWLSTIPATIQLVL-EGRYIVAIFLSVTHLFLLDYGATEILEDVP-GQSAYLTGMSIIGGIALFPSAIEGAIMGPLITTVMIALKDLYAEFVLGERDD 1878
            V+      +FS + +++     SG A + NFV   ++F   L+YL++S  E     + ++ + P+S    S+ I  + VE   +   GV  A+ +++ F G  TWL   ++ I+ +++ +  A I   +P L ++ + +PA + L L +G    AI L V HL    +  T I  D+  G   YLTG+++ GG       +EGAI+GP++  +++   ++Y+  ++   + 
Sbjct:  626 VMSRNVSLLFSTITTLLTILFYSGTA-LLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRHSRGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAIIGPILLCILVVASNIYSAMLVSPTNS 853
The following BLAST results are available for this feature:
BLAST of Vigun08g212000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
TM245_HUMAN4.115e-1327.18Transmembrane protein 245 OS=Homo sapiens OX=9606 ... [more]
TM245_MOUSE4.924e-1327.67Transmembrane protein 245 OS=Mus musculus OX=10090... [more]
TM245_RAT9.401e-1327.18Transmembrane protein 245 OS=Rattus norvegicus OX=... [more]
TM245_BOVIN6.619e-1226.84Transmembrane protein 245 OS=Bos taurus OX=9913 GN... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002549Transmembrane protein TqsA-likePFAMPF01594AI-2E_transportcoord: 406..614
e-value: 2.2E-9
score: 36.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..48

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g212000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g212000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g212000.1; organism=Vigna unguiculata; type=mRNA; length=2545bp
GACTTGTGGAAAAGGAGAACAACACAACACAAGACACACTCACATGAAGC
CAAGTACCAATTCCTTTTTGCATACTTTTCACTTCACTCTGCTTCCTTTG
TCAGTTGAAAAAGCTGCAGTCTTTACTATTTTTACAACAAAAACCATGTA
TCTATGTTTATTTTCTTAGCCATTAAAACCTGACACGACACATATTTATT
CTTTCGTTCATTAATTTTCACAAATCTATTGATTTGCATTGGTGTTTTTG
TTCTGTCGCACTCTCTTGATGGACCTTGTGCCTTATTCTGATCCTAACTC
AACCACGGCCACCCCGCCGTGGTACGACATGTTCCGATCCGCTTCCCTTC
GAAAGCCCTCCTCGGATCCTGcgccgccgccgccgccgAATGCGGACCAA
AAAGTCAACCCCTCCGGCGACTCTCAGGCGCGGCTCGCCCTTTACATAGC
CATGGCCCACGCCGGCCTCGTCTTCGCCATTCTCATCCTCTTCTCTCTCT
ACAAACTCCTGCAACAGTACCTCAAACCCCTTCAATGGGCCATCCTATGT
TCCATCCCTCTCAGACTCATTCACCAAGCCATCGTTTCCTTTTGGTCTCA
CCCTCTCAAACTGGGGCTCCTCCACACTCTCCTCGCCCTTCCACTCACCG
TTTTCTCGCTCTTCGTTACCAGCCTCGCCGAGATTCGGCAAACTCTTCTC
ACAATCCTTCTCCGGAAACCAAAGCCTCCGAATGAGGAGGACTCAAAGAA
GCTTAGTGCGTTTTCCACTTTGCTTCGTCTGCTCTTGTCTTTTGGGGTCT
TTGTTTTTGCTTATGAGAGGCTTGGCGCTGTTGGGTCGTTGTCACTTCTC
GGATTAGGCTTCGTTTTCAGTTCCAAGAATGTGGCTTTCAGTTTCTCTCC
CTTTGGTGCGTATTTCACCAGAGGGATATTGAAGAAGTTGAAAACCGTTG
TGGCTGTTGGGTTGATTGTCGGGATGATTGTCGGGTTCTTGACTGGGGTG
ATTTTCTTCTCTTATCAGATTGGAGGTGAAGGGAAGGAGGCAATGATTTC
GCTGAAATTGCGAATGGAAGAGAACAACTATGCTGAGAGACTCGGTGTGA
AGAAGTGGATTGAGGACAATGATATTGCTGGAATGGTGGATAAGTACACT
GGTCAGTTTTATGAGACGGTTTCTGATCAGATTGATGGGTTGGCAGCGCA
GTACAATATGACTGAATTTGTGACGGTTGTTAAGCAGTTTGTGATAACTG
ATCCTGCCATTGCTAACTCTTCTCAGGTTCCAGCGGATTCATTAATGGTG
GTTTCACCGCTCGCGGAAAGGATCTTGAATTTGAAGGGTATGATTAGGAA
TAGGGAGTGGGGGGGAATTTATGCAGAAGTTAATGCCCTTTTGCGAGAAC
TTATAATCACTAGGGAAGATTTGTTTGAGAGGGCAAAAGGGTATGCAGTT
AAAGGGATGGATGTTGGTCAACGTCTTTTGGCTAGTGGTACAAGTGTGCT
TGGAAGCGGTGCAAAGTTTGTGTTTTCCATTTTGAACTCCATAGTTTCTG
GTGCTGCTGAGGTTTTCAATTTTGTGTCTCAAACGATGGTTTTTTTCTGG
GTTTTGTATTACCTCATAACATCAGAGTCGGGTGGGGTAACAGAACAAAT
GATGCACATGGTTCCAATTTCAAACTCGGCTAAGATAAGGTGCGTTGAAG
TGTTGGATAAGGCAATTTCAGGAGTCCTTTTGGCCACTCCTGAGATTTCA
TTCTTCCAAGGATGCCTCACTTGGCTTTTGTTTAGGCTATACAGAATACA
TTTCTTGTATGTGTCAACTGTGTTTGCCTTTATTAGCCCTTTCATTCCGA
TATTACCGTCTTGGCTTTCAACAATTCCAGCAACAATACAGCTAGTGCTA
GAAGGAAGATACATAGTGGCCATTTTCTTGTCTGTTACTCACCTTTTTCT
CTTGGATTATGGGGCAACTGAGATTCTGGAAGATGTACCCGGGCAAAGTG
CATATCTTACTGGAATGAGCATCATTGGGGGAATTGCCTTGTTTCCATCT
GCTATAGAGGGGGCTATTATGGGGCCATTAATAACTACAGTCATGATTGC
TCTGAAGGATTTATATGCTGAATTTGTCTTGGGGGAGCGTGATGATAAGG
TGAAGCAGAAGGAAAATTAGGCATATACTTGTGTCTGTGACTGTATATAT
ATTTGCAGTTCAACATGGCTGCTAGTACATTGTTTGTTGTTTTATGCCAT
TCTAGCAGTGGAGCTTGTGTCTAAGCTCGTCATTTGTTTGTAATTATTCT
TTTATCTATATCATTTCATTATTGTAATTGACCAGATAGGACTTTGTTTT
CCTCTCTTTTTTCCTCCATTTAGGGGTCATAATGATTTTCACTTGGTGAC
AGTGCTCGATGGTTGTAATATTCCTGTGTTGTATCTCTGAAAGAATTTTT
CAGATTCTTTGTACCAAGGAGAAATGTGAAATAAAGAAGAAAAAAAATCA
CAGAAGTTTCTTCTGTACAAAATTTTCTGCAATTTTCTTTTGATT
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protein sequence of Vigun08g212000.1_Vu_IT97K-499-35_v1.1

>Vigun08g212000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g212000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g212000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=634bp
MDLVPYSDPNSTTATPPWYDMFRSASLRKPSSDPAPPPPPNADQKVNPSG
DSQARLALYIAMAHAGLVFAILILFSLYKLLQQYLKPLQWAILCSIPLRL
IHQAIVSFWSHPLKLGLLHTLLALPLTVFSLFVTSLAEIRQTLLTILLRK
PKPPNEEDSKKLSAFSTLLRLLLSFGVFVFAYERLGAVGSLSLLGLGFVF
SSKNVAFSFSPFGAYFTRGILKKLKTVVAVGLIVGMIVGFLTGVIFFSYQ
IGGEGKEAMISLKLRMEENNYAERLGVKKWIEDNDIAGMVDKYTGQFYET
VSDQIDGLAAQYNMTEFVTVVKQFVITDPAIANSSQVPADSLMVVSPLAE
RILNLKGMIRNREWGGIYAEVNALLRELIITREDLFERAKGYAVKGMDVG
QRLLASGTSVLGSGAKFVFSILNSIVSGAAEVFNFVSQTMVFFWVLYYLI
TSESGGVTEQMMHMVPISNSAKIRCVEVLDKAISGVLLATPEISFFQGCL
TWLLFRLYRIHFLYVSTVFAFISPFIPILPSWLSTIPATIQLVLEGRYIV
AIFLSVTHLFLLDYGATEILEDVPGQSAYLTGMSIIGGIALFPSAIEGAI
MGPLITTVMIALKDLYAEFVLGERDDKVKQKEN*
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mRNA from alignment at Vu08:37346619..37349568+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g212000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g212000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g212000.1; organism=Vigna unguiculata; type=mRNA; length=2950bp; location=Sequence derived from: Vu08:37346619..37349568+ (Vigna unguiculata
GACTTGTGGAAAAGGAGAACAACACAACACAAGACACACTCACATGAAGC
CAAGTACCAATTCCTTTTTGCATACTTTTCACTTCACTCTGCTTCCTTTG
TCAGTTGAAAAAGCTGCAGTCTTTACTATTTTTACAACAAAAACCATGTA
TCTATGTTTATTTTCTTAGCCATTAAAACCTGACACGACACATATTTATT
CTTTCGTTCATTAATTTTCACAAATCTATTGATTTGCATTGGTGTTTTTG
TTCTGTCGCACTCTCTTGATGGACCTTGTGCCTTATTCTGATCCTAACTC
AACCACGGCCACCCCGCCGTGGTACGACATGTTCCGATCCGCTTCCCTTC
GAAAGCCCTCCTCGGATCCTGCGCCGCCGCCGCCGCCGAATGCGGACCAA
AAAGTCAACCCCTCCGGCGACTCTCAGGCGCGGCTCGCCCTTTACATAGC
CATGGCCCACGCCGGCCTCGTCTTCGCCATTCTCATCCTCTTCTCTCTCT
ACAAACTCCTGCAACAGTACCTCAAACCCCTTCAATGGGCCATCCTATGT
TCCATCCCTCTCAGACTCATTCACCAAGCCATCGTTTCCTTTTGGTCTCA
CCCTCTCAAACTGGGGCTCCTCCACACTCTCCTCGCCCTTCCACTCACCG
TTTTCTCGCTCTTCGTTACCAGCCTCGCCGAGATTCGGCAAACTCTTCTC
ACAATCCTTCTCCGGAAACCAAAGCCTCCGAATGAGGAGGACTCAAAGAA
GCTTAGTGCGTTTTCCACTTTGCTTCGTCTGCTCTTGTCTTTTGGGGTCT
TTGTTTTTGCTTATGAGAGGCTTGGCGCTGTTGGGTCGTTGTCACTTCTC
GGATTAGGCTTCGTTTTCAGTTCCAAGAATGTGGCTTTCAGTTTCTCTCC
CTTTGGTGCGTATTTCACCAGAGGGATATTGAAGAAGTTGAAAACCGTTG
TGGCTGTTGGGTTGATTGTCGGGATGATTGTCGGGTTCTTGACTGGGGTG
ATTTTCTTCTCTTATCAGATTGGAGGTGAAGGGAAGGAGGCAATGATTTC
GCTGAAATTGCGAATGGAAGAGAACAACTATGCTGAGAGACTCGGTGTGA
AGAAGTGGATTGAGGACAATGATATTGCTGGAATGGTGGATAAGTACACT
GGTCAGTTTTATGAGACGGTTTCTGATCAGATTGATGGGTTGGCAGCGCA
GTACAATATGACTGAATTTGTGACGGTTGTTAAGCAGTTTGTGATAACTG
ATCCTGCCATTGCTAACTCTTCTCAGGTTCCAGCGGATTCATTAATGGTG
GTTTCACCGCTCGCGGAAAGGATCTTGAATTTGAAGGGTATGATTAGGAA
TAGGGAGTGGGGGGGAATTTATGCAGAAGTTAATGCCCTTTTGCGAGAAC
TTATAATCACTAGGGAAGATTTGTTTGAGAGGGCAAAAGGGTATGCAGTT
AAAGGGATGGATGTTGGTCAACGTCTTTTGGCTAGTGGTACAAGTGTGCT
TGGAAGCGGTGCAAAGTTTGTGTTTTCCATTTTGAACTCCATAGTTTCTG
GTGCTGCTGAGGTTTTCAATTTTGTGTCTCAAACGATGGTTTTTTTCTGG
GTTTTGTATTACCTCATAACATCAGAGTCGGGTGGGGTAACAGAACAAAT
GATGCACATGGTTCCAATTTCAAACTCGGCTAAGATAAGGTGCGTTGAAG
TGTTGGATAAGGCAATTTCAGGAGTCCTTTTGGCCACTCCTGAGATTTCA
TTCTTCCAAGGATGCCTCACTTGGCTTTTGTTTAGGCTATACAGAATACA
TTTCTTGTATGTGTCAACTGTGTTTGCCTTTATTAGCCCTTTCATTCCGA
TATTACCGTCTTGGCTTTCAACAATTCCAGCAACAATACAGCTAGTGCTA
GAAGGAAGATACATAGTGGCCATTTTCTTGTCTGTTACTCACCTTTTTCT
CTTGGATTATGGGGCAACTGAGATTCTGGAAGATGTACCCGGGCAAAGTG
CATATCTTACTGGAATGAGCATCATTGGGGGAATTGCCTTGTTTCCATCT
GCTATAGAGGTAAATGTTCACCCTCCATCGTTTGATGTTCTGATCTCTTT
CTGTACATTATAGTTTCTCTGCATTGTTCTTGTAATCAATCAGAAATCAT
AATAAATACTTCTGTTAAGATAGTGATGATGATAAAAGTGGATAATTATC
ATAAATGGTAATGACAATTGTGGTAGAATGACAGTATATAAACACTTTTC
TCTATAGTTCATACACTAAATACAATTTGAACTAATAGTCTCACATGCAT
TGTCATTGTTCCGATTAAGTGATTACATGAAGTTCTAACCTATGCTTGTT
CTAAAATTTAGACTGGTTTACCTGCATACCTTGATTTGATGTTGTAGTAT
CTAGTGTCTGCTTCTACTTCTATTGCATTCCATGGCATTGCTGAAGGAAT
TTGTTGGTCTGCAGGGGGCTATTATGGGGCCATTAATAACTACAGTCATG
ATTGCTCTGAAGGATTTATATGCTGAATTTGTCTTGGGGGAGCGTGATGA
TAAGGTGAAGCAGAAGGAAAATTAGGCATATACTTGTGTCTGTGACTGTA
TATATATTTGCAGTTCAACATGGCTGCTAGTACATTGTTTGTTGTTTTAT
GCCATTCTAGCAGTGGAGCTTGTGTCTAAGCTCGTCATTTGTTTGTAATT
ATTCTTTTATCTATATCATTTCATTATTGTAATTGACCAGATAGGACTTT
GTTTTCCTCTCTTTTTTCCTCCATTTAGGGGTCATAATGATTTTCACTTG
GTGACAGTGCTCGATGGTTGTAATATTCCTGTGTTGTATCTCTGAAAGAA
TTTTTCAGATTCTTTGTACCAAGGAGAAATGTGAAATAAAGAAGAAAAAA
AATCACAGAAGTTTCTTCTGTACAAAATTTTCTGCAATTTTCTTTTGATT
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Coding sequence (CDS) from alignment at Vu08:37346619..37349568+

>Vigun08g212000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g212000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g212000.1; organism=Vigna unguiculata; type=CDS; length=1902bp; location=Sequence derived from: Vu08:37346619..37349568+ (Vigna unguiculata
ATGGACCTTGTGCCTTATTCTGATCCTAACTCAACCACGGCCACCCCGCC
GTGGTACGACATGTTCCGATCCGCTTCCCTTCGAAAGCCCTCCTCGGATC
CTGCGCCGCCGCCGCCGCCGAATGCGGACCAAAAAGTCAACCCCTCCGGC
GACTCTCAGGCGCGGCTCGCCCTTTACATAGCCATGGCCCACGCCGGCCT
CGTCTTCGCCATTCTCATCCTCTTCTCTCTCTACAAACTCCTGCAACAGT
ACCTCAAACCCCTTCAATGGGCCATCCTATGTTCCATCCCTCTCAGACTC
ATTCACCAAGCCATCGTTTCCTTTTGGTCTCACCCTCTCAAACTGGGGCT
CCTCCACACTCTCCTCGCCCTTCCACTCACCGTTTTCTCGCTCTTCGTTA
CCAGCCTCGCCGAGATTCGGCAAACTCTTCTCACAATCCTTCTCCGGAAA
CCAAAGCCTCCGAATGAGGAGGACTCAAAGAAGCTTAGTGCGTTTTCCAC
TTTGCTTCGTCTGCTCTTGTCTTTTGGGGTCTTTGTTTTTGCTTATGAGA
GGCTTGGCGCTGTTGGGTCGTTGTCACTTCTCGGATTAGGCTTCGTTTTC
AGTTCCAAGAATGTGGCTTTCAGTTTCTCTCCCTTTGGTGCGTATTTCAC
CAGAGGGATATTGAAGAAGTTGAAAACCGTTGTGGCTGTTGGGTTGATTG
TCGGGATGATTGTCGGGTTCTTGACTGGGGTGATTTTCTTCTCTTATCAG
ATTGGAGGTGAAGGGAAGGAGGCAATGATTTCGCTGAAATTGCGAATGGA
AGAGAACAACTATGCTGAGAGACTCGGTGTGAAGAAGTGGATTGAGGACA
ATGATATTGCTGGAATGGTGGATAAGTACACTGGTCAGTTTTATGAGACG
GTTTCTGATCAGATTGATGGGTTGGCAGCGCAGTACAATATGACTGAATT
TGTGACGGTTGTTAAGCAGTTTGTGATAACTGATCCTGCCATTGCTAACT
CTTCTCAGGTTCCAGCGGATTCATTAATGGTGGTTTCACCGCTCGCGGAA
AGGATCTTGAATTTGAAGGGTATGATTAGGAATAGGGAGTGGGGGGGAAT
TTATGCAGAAGTTAATGCCCTTTTGCGAGAACTTATAATCACTAGGGAAG
ATTTGTTTGAGAGGGCAAAAGGGTATGCAGTTAAAGGGATGGATGTTGGT
CAACGTCTTTTGGCTAGTGGTACAAGTGTGCTTGGAAGCGGTGCAAAGTT
TGTGTTTTCCATTTTGAACTCCATAGTTTCTGGTGCTGCTGAGGTTTTCA
ATTTTGTGTCTCAAACGATGGTTTTTTTCTGGGTTTTGTATTACCTCATA
ACATCAGAGTCGGGTGGGGTAACAGAACAAATGATGCACATGGTTCCAAT
TTCAAACTCGGCTAAGATAAGGTGCGTTGAAGTGTTGGATAAGGCAATTT
CAGGAGTCCTTTTGGCCACTCCTGAGATTTCATTCTTCCAAGGATGCCTC
ACTTGGCTTTTGTTTAGGCTATACAGAATACATTTCTTGTATGTGTCAAC
TGTGTTTGCCTTTATTAGCCCTTTCATTCCGATATTACCGTCTTGGCTTT
CAACAATTCCAGCAACAATACAGCTAGTGCTAGAAGGAAGATACATAGTG
GCCATTTTCTTGTCTGTTACTCACCTTTTTCTCTTGGATTATGGGGCAAC
TGAGATTCTGGAAGATGTACCCGGGCAAAGTGCATATCTTACTGGAATGA
GCATCATTGGGGGAATTGCCTTGTTTCCATCTGCTATAGAGGGGGCTATT
ATGGGGCCATTAATAACTACAGTCATGATTGCTCTGAAGGATTTATATGC
TGAATTTGTCTTGGGGGAGCGTGATGATAAGGTGAAGCAGAAGGAAAATT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002549AI-2E-like