Homology
BLAST of Vigun09g177500.1 vs. DB:Swiss
Match:
RBM38_HUMAN (RNA-binding protein 38 OS=Homo sapiens OX=9606 GN=RBM38 PE=1 SV=2)
HSP 1 Score: 127.102 bits (318), Expect = 3.718e-34
Identity = 55/82 (67.07%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 100 DTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASL 345
DTTFTK+FVGGL + T +RKYF+ FGDI EAV+ITD+ TGKS+GYGFVT D+ +A RAC DPNPIIDGR+AN N+A L
Sbjct: 30 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYL 111
BLAST of Vigun09g177500.1 vs. DB:Swiss
Match:
RBM38_CHICK (RNA-binding protein 38 OS=Gallus gallus OX=9031 GN=RBM38 PE=2 SV=1)
HSP 1 Score: 126.331 bits (316), Expect = 5.036e-34
Identity = 55/82 (67.07%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 100 DTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASL 345
DTTFTK+FVGGL + T +RKYF+ FGDI EAV+ITD+ TGKS+GYGFVT D+ +A RAC DPNPIIDGR+AN N+A L
Sbjct: 7 DTTFTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYL 88
BLAST of Vigun09g177500.1 vs. DB:Swiss
Match:
RBM38_XENTR (RNA-binding protein 38 OS=Xenopus tropicalis OX=8364 GN=rbm38 PE=2 SV=1)
HSP 1 Score: 125.561 bits (314), Expect = 8.747e-34
Identity = 55/82 (67.07%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 100 DTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASL 345
DTTFTK+FVGGL + T +RKYF+ FGDI EAV+ITD+ TGKS+GYGFVT D+ +A RAC DPNPIIDGR+AN N+A L
Sbjct: 7 DTTFTKIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTGKSRGYGFVTMSDRAAAERACKDPNPIIDGRKANVNLAYL 88
BLAST of Vigun09g177500.1 vs. DB:Swiss
Match:
ARP1_ARATH (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)
HSP 1 Score: 125.946 bits (315), Expect = 1.785e-33
Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 1
Query: 94 FGDTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASL 345
FGDT TK+FVGGLAW+T E M +F ++GDILEAVII+DK T +SKGYGFVTF D ++A RAC D PII+GRRANCN+ASL
Sbjct: 11 FGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGFVTFKDAKAATRACEDSTPIINGRRANCNLASL 94
BLAST of Vigun09g177500.1 vs. DB:Swiss
Match:
RB24B_XENLA (RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1)
HSP 1 Score: 125.176 bits (313), Expect = 1.865e-33
Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 100 DTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASL 345
DTT+TK+FVGGL + T +RKYF+ FGDI EAV+ITD+ TGKS+GYGFVT D+ +A RAC DPNPIIDGR+AN N+A L
Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYL 88
BLAST of Vigun09g177500.1 vs. DB:Swiss
Match:
RB24A_XENLA (RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1)
HSP 1 Score: 124.405 bits (311), Expect = 2.927e-33
Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 100 DTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASL 345
DTT+TK+FVGGL + T +RKYF+ FGDI EAV+ITD+ TGKS+GYGFVT D+ +A RAC DPNPIIDGR+AN N+A L
Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYL 88
BLAST of Vigun09g177500.1 vs. DB:Swiss
Match:
RBM24_XENTR (RNA-binding protein 24 OS=Xenopus tropicalis OX=8364 GN=rbm24 PE=2 SV=1)
HSP 1 Score: 124.405 bits (311), Expect = 3.269e-33
Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 100 DTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASL 345
DTT+TK+FVGGL + T +RKYF+ FGDI EAV+ITD+ TGKS+GYGFVT D+ +A RAC DPNPIIDGR+AN N+A L
Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYL 88
BLAST of Vigun09g177500.1 vs. DB:Swiss
Match:
RBM38_XENLA (RNA-binding protein 38 OS=Xenopus laevis OX=8355 GN=rbm38 PE=1 SV=2)
HSP 1 Score: 123.635 bits (309), Expect = 4.071e-33
Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 1
Query: 100 DTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASL 345
DTTFTK+FVGGL + T +RKYF+ FGDI EAV+ITD+ T KS+GYGFVT D+ +A RAC DPNPIIDGR+AN N+A L
Sbjct: 7 DTTFTKIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTAKSRGYGFVTMSDRAAAERACKDPNPIIDGRKANVNLAYL 88
BLAST of Vigun09g177500.1 vs. DB:Swiss
Match:
RBM24_MOUSE (RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1)
HSP 1 Score: 123.635 bits (309), Expect = 7.159e-33
Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 100 DTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASL 345
DTT+TK+FVGGL + T +RKYF+ FGDI EAV+ITD+ TGKS+GYGFVT D+ +A RAC DPNPIIDGR+AN N+A L
Sbjct: 7 DTTYTKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYL 88
BLAST of Vigun09g177500.1 vs. DB:Swiss
Match:
RBM24_CHICK (RNA-binding protein 24 OS=Gallus gallus OX=9031 GN=RBM24 PE=1 SV=2)
HSP 1 Score: 123.635 bits (309), Expect = 7.369e-33
Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 100 DTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASL 345
DTT+TK+FVGGL + T +RKYF+ FGDI EAV+ITD+ TGKS+GYGFVT D+ +A RAC DPNPIIDGR+AN N+A L
Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYL 88
The following BLAST results are available for this feature:
BLAST of Vigun09g177500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot )
Total hits: 10
200 400 600 800 1000 1200 1400 1600 1800 2000 2200 Expect = 3.72e-34 / Id = 67.07 Expect = 5.04e-34 / Id = 67.07 Expect = 8.75e-34 / Id = 67.07 Expect = 1.79e-33 / Id = 67.86 Expect = 1.86e-33 / Id = 65.85 Expect = 2.93e-33 / Id = 65.85 Expect = 3.27e-33 / Id = 65.85 Expect = 4.07e-33 / Id = 65.85 Expect = 7.16e-33 / Id = 65.85 Expect = 7.37e-33 / Id = 65.85 Sequence RBM38_HUMAN RBM38_CHICK RBM38_XENTR ARP1_ARATH RB24B_XENLA RB24A_XENLA RBM24_XENTR RBM38_XENLA RBM24_MOUSE RBM24_CHICK
Match Name E-value Identity Description
RBM38_HUMAN 3.718e-34 67.07 RNA-binding protein 38 OS=Homo sapiens OX=9606 GN=... [more] RBM38_CHICK 5.036e-34 67.07 RNA-binding protein 38 OS=Gallus gallus OX=9031 GN... [more] RBM38_XENTR 8.747e-34 67.07 RNA-binding protein 38 OS=Xenopus tropicalis OX=83... [more] ARP1_ARATH 1.785e-33 67.86 Probable RNA-binding protein ARP1 OS=Arabidopsis t... [more] RB24B_XENLA 1.865e-33 65.85 RNA-binding protein 24-B OS=Xenopus laevis OX=8355... [more] RB24A_XENLA 2.927e-33 65.85 RNA-binding protein 24-A OS=Xenopus laevis OX=8355... [more] RBM24_XENTR 3.269e-33 65.85 RNA-binding protein 24 OS=Xenopus tropicalis OX=83... [more] RBM38_XENLA 4.071e-33 65.85 RNA-binding protein 38 OS=Xenopus laevis OX=8355 G... [more] RBM24_MOUSE 7.159e-33 65.85 RNA-binding protein 24 OS=Mus musculus OX=10090 GN... [more] RBM24_CHICK 7.369e-33 65.85 RNA-binding protein 24 OS=Gallus gallus OX=9031 GN... [more]
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>Vigun09g177500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g177500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g177500.1; organism=Vigna unguiculata; type=mRNA; length=2337bp back to top protein sequence of Vigun09g177500.1_Vu_IT97K-499-35_v1.1
>Vigun09g177500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g177500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g177500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=284bp back to top mRNA from alignment at Vu09:34977561..34982531+
Legend: five_prime_UTR polypeptide CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g177500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g177500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g177500.1; organism=Vigna unguiculata; type=mRNA; length=4971bp; location=Sequence derived from: Vu09:34977561..34982531+ (Vigna unguiculataAAATTTAAATTGAAAATCATTTTCACTTTTTAATTGCCTCTTTAAAATGT
GAGATCAGCCATTGTATAATTACCCTTTTTTTTTTCGGTTAAAGGGTAAT
TTAATAGACCGTACTGAAGGAATGGTTGTAAATGTTTTCAAAGAGACAGA
AAAAAGAAAGGGAGTTTGGTAAATGTGGTTGAGTTACAGAAAAAGCGAAG
CGAAAAATCTAACAAGGGAGAAGAAGAGAAGGAGAAGCATATTAAGGGTA
GTAAGAGTGAGTATATTAATGCAAAGACAGTGAGGACACACTTGACAACA
CTCGTAGTGAGATGGTATATAGTATCACAAATCCCTTGTCTTTCTTCCTT
CGCTTTTTCTGCCAGCAAATTAGAGTTAGCACCTGTCAGATCTCTCTCAT
TCACACACCCTTTTATTCAAAATAAATTTCTTTACTCTCCTTATATATTT
TTGTTGCAATCAACCAACGCCTCTGTTCCAAACAACCATCATAAACCATG
CCCACCCTCTTCTCTCACCCTCTTCAAATGCAATGATTCCACTGCTGCCA
AAACCAACACACTAGGGAAGGCAAAGGCACGCATATATAGCACGGAGGAG
AAACATTTTATGGAGTTTTCGCCTTCCCAAGAGTTGAAGAAGGAGCTTAA
ATGAGTGAGACAGCGAGTCTTCATGCACAAACAAGGACACCCATTTCTTC
TCTGGAAGCCATGGCTCATCACCACCCGCATTATCGGTCACCCTTCGGAG
ACACTACCTTCACCAAACTGTTCGTGGGAGGACTAGCCTGGGAGACTCCC
ACCGAAGAAATGCGCAAATATTTCCAGCAGTTCGGAGACATTCTTGAAGC
TGTCATAATCACTGACAAGAACACCGGAAAATCCAAAGGCTACGGTTTC G
TATGTGCTCTCTTTCTCTTCTTCTCCACGCTTCACATACCTTCAATACCA
CCAAGTTAACGAAACTATATCTGTGTACTATGAATTCAACAACAGGTAAC
ATTCTGCGACCAAGAATCAGCAAGAAGAGCATGTGCTGATCCAAATCCAA
TAATAGATGGCAGAAGAGCAAATTGTAATATTGCTTCTCTGGGGAGGACT
CGACCTTCACCACCTCGAG GTTATAACTTACATCCTTTGATATATTATTA
ATATTATCCCTCGTAACGTATAAAACTGATACTGCTTGTCTTTTGATATG
TGAACATCCAAGTACTTTTTTCCTCAGTACATGTTCATCACTTTTAATAG
AAGAGAGAAAAAAAAAAAAAAAAACTATTCTGTGTGATTTGATATGACAA
GGTGTGTCATTTACAGGGAGGAGTATAGTTCAAGGTGGAGGAGGAACAGT
ACAGAGTGTTCCGGGATCCGGACCGCCGCCGTCGCTGCCGCCAGCACCTG
CTGTTCTGTATCCGCCATATGG GTGAGTTGAGTTGAGTTATCTTGATTGA
GTGGAGGCATTAATAAATCATAATTTGATAGCACTCATAGTCAAAGGAAC
TGGTCCATGATGTTAATGGGGAAGTGCATGTAGACGCACTACATCTTACT
GTCTGCATATGTTGCTCACTGCTCCTCACCAGTTATAGTAGGCATCAGTG
TCAGCCTAAAAATCATATCGTAAATAAAGTACGAATGGGAAAAGGTTGCT
CTGCCATCCACATCCACATAACGTGCATTATTGCTACTTCTATTTTCCAT
AATCTCATCTCACTTCCTTAATGCTTAATCAACTGCATTTTTTTAGCTCC
TTAATCAATTGCTTTCAATATTTTTCGCCTCATCTTTCTTTAAATCTGTA
TGTATCAGTTTTAAATTTGAAAATGCCGTAAATTGAATAAAGCGTATGGA
GGCTTTATTAGATACGTAGCATCATTGATATAGATAGTTACAGACAACTA
TGGTAATAGTAAAAGTGCTAGTGATAACAGCTACGGTCAGTAGATGTGTG
ACCCCTGACAGTGCATATACGTGTATATATGTCTCTGTGGTCCTTGAACA
ATTAATTTAATTTATGATCTTGTACAAGATAAATCCCACAGCTCTCGGTA
CTCTTGCATCTTCTCGATCATTGAGTCATTTTCGCACCAGCATGTACTCT
TCAGGGCTCTAAAATACTATAAATGTAAAAGTTTAGCTTAGAGTTCAAAA
GTAGGCATGGAAAATTGTATTCAAAAGTACAGAGATGCAGACTTTTTCTA
CTTGGTACCTTTGACTGGAAAATGCTAATATTAACTTTAGATGCTTTGCA
CTAAAGCAAAAGCTATTATATTGAAATACTGTGCTTCTGAAGTAAGCTAT
TCAATTTGACGAGTTGCATATATAGTGACAATGATTACAGTTTCATTTCT
TCAAAAGAGTGTGACTCATCAGCTTAACCTGAGTTTACCGAGTTTAATTT
GTCATCTATTTATGCATGTATTCAAATATATCACTTATTATACCACCTTT
GTCATTCTTATTTATATCTTTACATAGTTAGGTGGTAAAGGATAATGTTA
AATAGGTGTAACAATTTGTTTTGTGTGAAAGTATTACTATGCCTGAATTA
AGTCACGGTAAATTTAAACTTGGGAACTGTGTACCAGGCATCAATGGTAG
CACACAAACGTTAATCAATCTCTGTTTCTTGCTCTCTTTAGACACTGAAC
AACGAGGGACCCACGACAATATACGACGTATACTGATGTTACCCGAAAAA
CATTACATAATTCACAACTGCATGCTATTTTGAATGATTACTTTATTCTC
AAAGAAAAATGCAGTAACGCATGCAATTTACATTATTTTGCCACTGATTA
AACTCCTTTGGACTTTACTCTCTCTCAGCTACGCAGCCTACACTCCTGAT
TATGGATACCACCACCAA GTAAGTGTCTTTCTCTGTTATGTAGATTTTAA
CGATGATATCTGGATTTAGCAAGTATTAGTGGAGAACAGTTGGATAATGG
TATAAGTTAATGAATAATGATTGTACGAAAACAGGCGACGTTGTACAACC
CACAGATTCAGCAACCACAATACTATCAACAAGTCTATGGAGCATCATCT
TCAACAATGAGCACCCCGTATTACTATGGCTACTCTTTGCAAGCACCAAG
AAACACATTCTCTTCACCCCAGGCAAATCGCCTATCACCTGGACCATCTT
ATCTGTACTATCCTACACCCATGGAAGTCTCATTCTCTGCATATCGCCCA
CTACAATCACCAATCACCCAAAACTTTCCTTCTCCAACTG GTACCTTTAA
CTCATCCCTTACACTCTTTACTTAGTTTAATTTAATTACTTTTCATCATT
CAATTATTCTTTCTTTCAAAAACATATTTCATTCACACGTATACCACAGA
GATGGTGCGCGAGTGAGAGAGACAGATGTGTGCATTATGATGCGTTTACT
GACACACTATATATTATGATTTGGCTGCAATACATGGGCATGGGGTCCAC
ATGGGCAACCACAGAGCCATGTGAATGAGCTGTCTCGGTTGCGCCATGAA
TCAATAGGTCAATGTGGAAAGTCATGACAGAGTTAGAGAGGGTCATCGTG
TAAAGTAACAGTGGATACATGTGATAGAATGGGGTGGTTAATTCTTTTTA
TATATATTACTAGTTATATCTTTAAGTCACTCAAATCTTCTACCATTCAT
GTGTTGCCTTGCCCCCACATGCATGTTAGATAATATAAAGTTTTATTTTA
CAGAACAGAAAAACAGTTTTTCCATTTCACTAAATTTTCACATTCCTAGC
CAACAAAAGCTACATGTGTATGGAAGATCCTGTGAAATGTTTCTTTACTA
TGAAACACAAACATGTTTGCAAGAGTGAATTTCGTCAGAGACTAGCCGTG
GTCTTACTTTGTTTGCTTTTCTTTAAAGAGTCTTATCTGGTTTTCTGTTC
TTTCTTTGCCCATGTGCGCAAGATATTATATAGTAATAACAAAATAATTG
TCGAAAATGACATTGCTAGCTACCATTTATAAATGTACCTGCTTATGATC
TCTATATTTGAGCATAACTTCAATTATTGTTTATTAATTATGTGGTTGAT
CTTGATCAGATTCACAGAGTCAGCAGCGTATCTCCTCTGAAACAGCAGCC
ACTTCAGAAAGTTCAAATACCCAAGGGAAGAACTGA TAAATATATATATA
TATATACGCCTACTAAGTTTCAACTGTTTAAACTTCAAGTTAATTTTCAT
CACATTAATTCTTCATCTTTTTCCCCATTATATCATAATTTTTTTAGTCC
ACAAGCTTTTGCTTTAGGAAATAATGGCTTAGCTGATTACCGGTGTTCTC
CACACCTGTGGCAATTTCGAAAGATGGACTAAACAACTTCTTCATTCATC
TAATCTTCATTCTCTTCTCCTTTCCTTTAAGGATTTTCACTATATACATA
CTAAAAATTATATCCTCACACACATGTAGGACGTACTAATCAAAAGTGTG
AGAAGTGGAATTAATGAATGAATCTTTGCTACTATCAAAAGTGTGAGAAA
TCTACTACTAAGATTAACTACTCTTCTACTCATGTTCTGCAACATGTGTC
TAAAATGAAACAAAAAGGGGATCCATAACTCACGTCGCTAGGGGAGGATG
AAAAATCAAGTAATTCTCAAATAAAACTTCTTTGTACTGTTCTTCACTCG
CTTTGATATCGCACGTTGGTGTGAATTTCCAAGCTCAATACCCATAAGTT
AGTACATATTGGATGAGAAATCAAACACGAACTTTAATTGCTTGTTGGGA
CGTGAGTTTCTCGATTGATTTTTACAGTATGTATAAATAAGGGAAATGTC
AATTTAATTATTTGCTTATTTTCCAACTTCTAGACCACATTGTAATGGTT
TCTTACAACTGTCTTTCATTGAATTCACATAACTTTTAGTTACAAATGAT
AAAAAATATGTTTTATTTATTTATTTATGACATCTTTTTATCAACTTCTT
TAACATAATTAGTCAATTCTT back to top Coding sequence (CDS) from alignment at Vu09:34977561..34982531+
>Vigun09g177500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g177500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g177500.1; organism=Vigna unguiculata; type=CDS; length=852bp; location=Sequence derived from: Vu09:34977561..34982531+ (Vigna unguiculata back to top
