Phvul.002G048000.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match: R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2) HSP 1 Score: 263.077 bits (671), Expect = 2.458e-91 Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 1 Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
MVR+SVLNDALKSMYNAEKRGKRQVM+RPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 1 MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match: RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3) HSP 1 Score: 261.922 bits (668), Expect = 8.592e-91 Identity = 125/130 (96.15%), Postives = 130/130 (100.00%), Query Frame = 1 Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
MVR+SVLNDALKSM+NAEKRGKRQVM+RPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 1 MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match: RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3) HSP 1 Score: 260.766 bits (665), Expect = 2.023e-90 Identity = 125/130 (96.15%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
MVRVSVLNDALKSM+NAEKRGKRQVM+RPSSKV+IKFLMVMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 1 MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match: R15A4_ARATH (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 4.761e-90 Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
MVR+SVLND LKSMYNAEKRGKRQVM+RPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match: R15A3_ARATH (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2) HSP 1 Score: 248.44 bits (633), Expect = 1.661e-85 Identity = 117/130 (90.00%), Postives = 124/130 (95.38%), Query Frame = 1 Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
MVR SVLND LKSM NAEK+GKRQVM+RPSSKVIIKFL VMQKHGYI EFEYVDDHR+GKIVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFGYIVLTTSAGIMDHEEAR+KNVGGKVLGFFY
Sbjct: 1 MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGKIVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKNVGGKVLGFFY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match: RS22A_YEAST (40S ribosomal protein S22-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPS22A PE=1 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 4.156e-75 Identity = 102/130 (78.46%), Postives = 117/130 (90.00%), Query Frame = 1 Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
M R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + +IE WTA LLP+RQFGY++LTTSAGIMDHEEARRK+V GK+LGF Y
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match: RS22_KLUMA (40S ribosomal protein S22 OS=Kluyveromyces marxianus OX=4911 GN=RPS22 PE=3 SV=3) HSP 1 Score: 221.476 bits (563), Expect = 6.808e-75 Identity = 100/130 (76.92%), Postives = 116/130 (89.23%), Query Frame = 1 Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
M R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + ++E WTA LLP+RQFGY++LTTSAGIMDHEEA RK+V GK+LGF Y
Sbjct: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKISDVEKWTANLLPARQFGYVILTTSAGIMDHEEAHRKHVSGKILGFVY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match: RS22B_YEAST (40S ribosomal protein S22-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPS22B PE=1 SV=3) HSP 1 Score: 221.476 bits (563), Expect = 6.808e-75 Identity = 102/130 (78.46%), Postives = 117/130 (90.00%), Query Frame = 1 Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
M R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + +IE WTA LLP+RQFGY++LTTSAGIMDHEEARRK+V GK+LGF Y
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLLRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match: RS22_KLULA (40S ribosomal protein S22 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=RPS22 PE=1 SV=3) HSP 1 Score: 221.476 bits (563), Expect = 9.256e-75 Identity = 100/130 (76.92%), Postives = 116/130 (89.23%), Query Frame = 1 Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
M R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + ++E WTA LLP+RQFGY++LTTSAGIMDHEEA RK+V GK+LGF Y
Sbjct: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIADVEKWTANLLPARQFGYVILTTSAGIMDHEEAHRKHVSGKILGFVY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match: RS22_CANGA (40S ribosomal protein S22 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=RPS22 PE=3 SV=3) HSP 1 Score: 221.09 bits (562), Expect = 1.079e-74 Identity = 101/130 (77.69%), Postives = 117/130 (90.00%), Query Frame = 1 Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
M R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQ+HGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + +IE WTA LLP+RQFGY++LTTSAGIMDHEEARRK+V GK+LGF Y
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQRHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130 The following BLAST results are available for this feature:
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.002G048000.1_Pv_G19833_v2.1 >Phvul.002G048000.1_Pv_G19833_v2.1 ID=Phvul.002G048000.1_Pv_G19833_v2.1; Name=Phvul.002G048000.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=131bpback to top mRNA from alignment at Chr02:4459970..4461940- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.002G048000.1_Pv_G19833_v2.1 ID=Phvul.002G048000.1_Pv_G19833_v2.1; Name=Phvul.002G048000.1; organism=Phaseolus vulgaris; type=mRNA; length=1971bp; location=Sequence derived from: Chr02:4459970..4461940- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr02:4459970..4461940- >Phvul.002G048000.1_Pv_G19833_v2.1 ID=Phvul.002G048000.1_Pv_G19833_v2.1; Name=Phvul.002G048000.1; organism=Phaseolus vulgaris; type=CDS; length=393bp; location=Sequence derived from: Chr02:4459970..4461940- (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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