Homology
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match:
R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)
HSP 1 Score: 263.077 bits (671), Expect = 2.458e-91
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 1
Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
MVR+SVLNDALKSMYNAEKRGKRQVM+RPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 1 MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match:
RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)
HSP 1 Score: 261.922 bits (668), Expect = 8.592e-91
Identity = 125/130 (96.15%), Postives = 130/130 (100.00%), Query Frame = 1
Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
MVR+SVLNDALKSM+NAEKRGKRQVM+RPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 1 MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match:
RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)
HSP 1 Score: 260.766 bits (665), Expect = 2.023e-90
Identity = 125/130 (96.15%), Postives = 129/130 (99.23%), Query Frame = 1
Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
MVRVSVLNDALKSM+NAEKRGKRQVM+RPSSKV+IKFLMVMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 1 MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match:
R15A4_ARATH (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3)
HSP 1 Score: 259.996 bits (663), Expect = 4.761e-90
Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 1
Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
MVR+SVLND LKSMYNAEKRGKRQVM+RPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match:
R15A3_ARATH (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)
HSP 1 Score: 248.44 bits (633), Expect = 1.661e-85
Identity = 117/130 (90.00%), Postives = 124/130 (95.38%), Query Frame = 1
Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
MVR SVLND LKSM NAEK+GKRQVM+RPSSKVIIKFL VMQKHGYI EFEYVDDHR+GKIVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFGYIVLTTSAGIMDHEEAR+KNVGGKVLGFFY
Sbjct: 1 MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGKIVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKNVGGKVLGFFY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match:
RS22A_YEAST (40S ribosomal protein S22-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPS22A PE=1 SV=2)
HSP 1 Score: 222.246 bits (565), Expect = 4.156e-75
Identity = 102/130 (78.46%), Postives = 117/130 (90.00%), Query Frame = 1
Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
M R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + +IE WTA LLP+RQFGY++LTTSAGIMDHEEARRK+V GK+LGF Y
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match:
RS22_KLUMA (40S ribosomal protein S22 OS=Kluyveromyces marxianus OX=4911 GN=RPS22 PE=3 SV=3)
HSP 1 Score: 221.476 bits (563), Expect = 6.808e-75
Identity = 100/130 (76.92%), Postives = 116/130 (89.23%), Query Frame = 1
Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
M R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + ++E WTA LLP+RQFGY++LTTSAGIMDHEEA RK+V GK+LGF Y
Sbjct: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKISDVEKWTANLLPARQFGYVILTTSAGIMDHEEAHRKHVSGKILGFVY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match:
RS22B_YEAST (40S ribosomal protein S22-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPS22B PE=1 SV=3)
HSP 1 Score: 221.476 bits (563), Expect = 6.808e-75
Identity = 102/130 (78.46%), Postives = 117/130 (90.00%), Query Frame = 1
Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
M R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + +IE WTA LLP+RQFGY++LTTSAGIMDHEEARRK+V GK+LGF Y
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLLRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match:
RS22_KLULA (40S ribosomal protein S22 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=RPS22 PE=1 SV=3)
HSP 1 Score: 221.476 bits (563), Expect = 9.256e-75
Identity = 100/130 (76.92%), Postives = 116/130 (89.23%), Query Frame = 1
Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
M R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + ++E WTA LLP+RQFGY++LTTSAGIMDHEEA RK+V GK+LGF Y
Sbjct: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIADVEKWTANLLPARQFGYVILTTSAGIMDHEEAHRKHVSGKILGFVY 130
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Match:
RS22_CANGA (40S ribosomal protein S22 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=RPS22 PE=3 SV=3)
HSP 1 Score: 221.09 bits (562), Expect = 1.079e-74
Identity = 101/130 (77.69%), Postives = 117/130 (90.00%), Query Frame = 1
Query: 1 MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 390
M R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQ+HGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVISPRF+V + +IE WTA LLP+RQFGY++LTTSAGIMDHEEARRK+V GK+LGF Y
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQRHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
The following BLAST results are available for this feature:
BLAST of Phvul.002G048000.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot )
Total hits: 10
0 1 Expect = 2.46e-91 / Id = 96.92 Expect = 8.59e-91 / Id = 96.15 Expect = 2.02e-90 / Id = 96.15 Expect = 4.76e-90 / Id = 95.38 Expect = 1.66e-85 / Id = 90.00 Expect = 4.16e-75 / Id = 78.46 Expect = 6.81e-75 / Id = 76.92 Expect = 6.81e-75 / Id = 78.46 Expect = 9.26e-75 / Id = 76.92 Expect = 1.08e-74 / Id = 77.69 Sequence R15A1_ARATH RS15A_BRANA RS15A_DAUCA R15A4_ARATH R15A3_ARATH RS22A_YEAST RS22_KLUMA RS22B_YEAST RS22_KLULA RS22_CANGA
Match Name E-value Identity Description
R15A1_ARATH 2.458e-91 96.92 40S ribosomal protein S15a-1 OS=Arabidopsis thalia... [more] RS15A_BRANA 8.592e-91 96.15 40S ribosomal protein S15a OS=Brassica napus OX=37... [more] RS15A_DAUCA 2.023e-90 96.15 40S ribosomal protein S15a OS=Daucus carota OX=403... [more] R15A4_ARATH 4.761e-90 95.38 40S ribosomal protein S15a-4 OS=Arabidopsis thalia... [more] R15A3_ARATH 1.661e-85 90.00 40S ribosomal protein S15a-3 OS=Arabidopsis thalia... [more] RS22A_YEAST 4.156e-75 78.46 40S ribosomal protein S22-A OS=Saccharomyces cerev... [more] RS22_KLUMA 6.808e-75 76.92 40S ribosomal protein S22 OS=Kluyveromyces marxian... [more] RS22B_YEAST 6.808e-75 78.46 40S ribosomal protein S22-B OS=Saccharomyces cerev... [more] RS22_KLULA 9.256e-75 76.92 40S ribosomal protein S22 OS=Kluyveromyces lactis ... [more] RS22_CANGA 1.079e-74 77.69 40S ribosomal protein S22 OS=Candida glabrata (str... [more]
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Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.002G048000.1_Pv_G19833_v2.1
>Phvul.002G048000.1_Pv_G19833_v2.1 ID=Phvul.002G048000.1_Pv_G19833_v2.1; Name=Phvul.002G048000.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=131bp back to top mRNA from alignment at Chr02:4459970..4461940-
Legend: five_prime_UTR polypeptide CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.002G048000.1_Pv_G19833_v2.1 ID=Phvul.002G048000.1_Pv_G19833_v2.1; Name=Phvul.002G048000.1; organism=Phaseolus vulgaris; type=mRNA; length=1971bp; location=Sequence derived from: Chr02:4459970..4461940- (Phaseolus vulgarisGCAGCGAAGGTCTTTCACTCCGCGCCGTCTCTGAGGTTCAATTCTG GTAA
GAACTTCTTTCAATTTGTTACCGATCCCAAGCCTTCGTCCTTTCGATTTC
ATTCATATTCAATTGTTATTCTTATACTCCACTCCAACTTCGTTTCGATT
ATCATTTTTATGAATGAACTTATGTTTCTTCTGTGCAATTTTATTCTTAC
TTTGTATCCTCGTAAACGGTTTTTTAGTTGTGATA ATGGTGAGGGTTAGT
GTCTTGAACGATGCTCTCAAGAGCATGTACAACGCCGAGAAGCGTGGGAA
GCGCCAGGTTATGGTTAGACCATCCTCCAAGGTTATAATAAAATTCCTCA
TGGTGATGCAGAAGCATG GTATTTTTTCTCAACATTAAACCCTAATTACC
TACTTGAATATAATAACGACTTGTTTCAGTGTTGTCACAATTTGTTGTGC
TCTGGTGATTTGTAGGGTACATTGGTGAGTTTGAGTATGTTGATGATCAC
AGGGCTGGGAAAATCGTGGTGGAATTGAATGGGAGGCTGAATAAGTGTGG
GGTTATAAGCCCCCGCTTTGATGTTGGTGTCAAAGAGATTGAAGGTTGGA
CTGCTAGACTGCTTCCTTCCAGACAG GTAGCCTTGTAACCCTGCTGAATC
ATGCCTTTGCCTAAGCTGTAAAAAAGATATAATCTGGTTGATGAGTTAGT
TAGTTATTTGAGTCATATTTTCTCAACATTGTGTTTGTTATGAAGCATCT
TTTAATGGTGTGTTTGGATGTGGGGTTTTGGAGGGGAAGGGATTGGAACA
GTTTTTTTAATCTTTGAGATAAGAGAATTACATGATGTTTATGAAAATAA
ACATAATGATAAGATTAATTAAGACACTGATGTTAAGTTTTATTTTTTTT
TCAAAATTACGCCAAGACCTCCTTTAGCTTCTTTCAATTCACACATACCC
CTGATTTTATTTTTGGTAACCCCTTGATTTTTTGGGATACTTCTATACTG
ACAGTTCTCTCACCAAGAACACATTGCAGTGTGTTCCTTAGTAAGGTAGT
TGTTTAAAGTTTAAAAGGAAGGAGTATTGACAGATTTTAAAGTAACTACT
GAAAGTAATTCATTCTAAAAGGATTATTAATTCAGCGACTGTTTAGTTCA
AATGAGGAGAGGGAAGGTGAGAGAAATTTTGATTAGATATTATGTTTGGT
TGAGAGGAGATGAGGAATTTTTATGGGAGAGAGGGGAAACAATCATTTTC
TTTTTTGGTTTTATAAGGACAGGAGAAGTGTTTTAAAAATTGATTTACTC
TTTGTATTCTTGTACTTTTAAATTTCAAAACATAAGTAGGGATGTTCTAT
AGCCATTACAGTTAAAAATGTTTGAAATCTCCTTTTCATTCCCTCCAAGT
TCCTCTAATCTAGAGATGAGCTAAAACTACTTGTGTTGATTTGAAATTGC
TATCCTATCTGTTATTGAACTTAATGTTATCCGTTATTCTGGTGTATGCA
TATGGTTTGTCCTGTTTGCCCCTAAACTTTGATTGGTAATAATCACGCAG
TTTGGGTATATCGTCTTGACAACATCTGCTGGTATCATGGATCATGAAGA
GGCCAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAG G
ATAGTTTTTTGTTTGTGGTTGGCAATGATTTCAGGTTGAGATTCACCGGT
TTTGATGGAGAATGTGCTAGTTTGCTTGCGACGTAAATTATAGAGAGCAA
AATGATCCTTTTTGTAGTTTTTCCTATTGCCTATTTTGCATTTTATTGTT
TGTGAAAACCACTCTCGTCCTAATCTTTATTTCTATAATTTTTCTTTGTC
GAACCAAATGCTAAGATTAATTTTAGGCACTGCAAATTGTATCTGGTAAA
CTTTTTGTGGTTTCCACAAGGTATATTTGATTTTGAGAAAGGTGAAGGCG
TTTCATTTTTCTTTTGGCTAG back to top Coding sequence (CDS) from alignment at Chr02:4459970..4461940-
>Phvul.002G048000.1_Pv_G19833_v2.1 ID=Phvul.002G048000.1_Pv_G19833_v2.1; Name=Phvul.002G048000.1; organism=Phaseolus vulgaris; type=CDS; length=393bp; location=Sequence derived from: Chr02:4459970..4461940- (Phaseolus vulgaris back to top
