Phvul.006G089800.3

Transcript Overview
NamePhvul.006G089800.3
Unique NamePhvul.006G089800.3_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr06supercontigChr06:20122526..20125776 -Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvR253Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL233Pisum sativum Cameor genome v1aPisum sativum
pspvL630Pisum sativum Cameor genome v1aPisum sativum
pvvuR536Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR555Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0293Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL391Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL392Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL235Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL360Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0730Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0911Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0485Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0717Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0781Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0956Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0959Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL215Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL437Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR510Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR532Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR572Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR582Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR563Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR573Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR483Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR523Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR470Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR488Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR649Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR663Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL217Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL328Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL133Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL403Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL225Cicer arietinum
carpvL338Cicer arietinum
ccapvL290Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL381Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR581Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR617Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR584Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR631Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR620Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR640Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR613Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR627Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR640Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR480Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR501Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR510Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR494Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR512Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.006G089800Phvul.006G089800_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G089800.3Phvul.006G089800.3_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.006G089800.3_Pv_G19833_v2.1Phvul.006G089800.3_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G089800.3.v2.1.three_prime_UTR.2Phvul.006G089800.3.v2.1.three_prime_UTR.2_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR
Phvul.006G089800.3.v2.1.three_prime_UTR.1Phvul.006G089800.3.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G089800.3.v2.1.CDS.9Phvul.006G089800.3.v2.1.CDS.9_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G089800.3.v2.1.CDS.8Phvul.006G089800.3.v2.1.CDS.8_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G089800.3.v2.1.CDS.7Phvul.006G089800.3.v2.1.CDS.7_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G089800.3.v2.1.CDS.6Phvul.006G089800.3.v2.1.CDS.6_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G089800.3.v2.1.CDS.5Phvul.006G089800.3.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G089800.3.v2.1.CDS.4Phvul.006G089800.3.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G089800.3.v2.1.CDS.3Phvul.006G089800.3.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G089800.3.v2.1.CDS.2Phvul.006G089800.3.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G089800.3.v2.1.CDS.1Phvul.006G089800.3.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G089800.3.v2.1.five_prime_UTR.1Phvul.006G089800.3.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


Homology
BLAST of Phvul.006G089800.3 vs. DB:Swiss
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 504.212 bits (1297), Expect = 3.805e-180
Identity = 239/286 (83.57%), Postives = 264/286 (92.31%), Query Frame = 1
Query:  121 ATNTAKIPMPPLNPKDPFLSKLASVAASSPETFLNPPRNSDTPPFLDIFDSPTLMATPAQVERSVSYNEHRPTRPPPDLPSLLLNGRIIYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVLWRGQEKIMADVAPPEDWDKGAGINIV 978
            A  +AKIPMPP+NPKDPFLS LAS+AA+SPE  LN P N+D PP+LDIFDSP LM++PAQVERSV+YNEHRP  PPPDLPS+LL+GRI+YIGMPLVPAVTELVVAELMYLQ++DPKEPIYIYINSTGTTRDDGETVGME+EGFAIYDS+MQLKNE+HTV VGAAIGQACLLLSAGT GKRFMMPHAKAMIQQPR+PSSGLMPASDVLIRAKEVI NR+ LV+LL+KHTGNS ETVANVMRRPYYMDA KAKEFGVIDR+LWRGQEKI+ADV P E++DK AGI  V
Sbjct:   44 AKASAKIPMPPINPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKNAGIKSV 329          
BLAST of Phvul.006G089800.3 vs. DB:Swiss
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpR PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.709e-58
Identity = 94/208 (45.19%), Postives = 139/208 (66.83%), Query Frame = 1
Query:  307 RSVSYNEHRPTRPPPDLPSLLLNGRIIYIGMPLVPA----------VTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVL 900
            +S  Y +     PPPDL SLLL  RI+Y+GMPL  +          VT+L++A+L+YLQ+ DP +PIY YINSTGT+   G+ VG ETE FAI D++  +K  +HT+ +G A+G A ++LS+GT G R  +PHA  ++ Q R  + G   A+D+ IRAKEVI N+  ++++L+ +TG ++E +A  M R +Y+   +AKE+G+IDRVL
Sbjct:    7 QSSYYGDMAFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYRASLPHATIVLNQNRTGAQG--QATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRTFYLTPAQAKEYGLIDRVL 212          
BLAST of Phvul.006G089800.3 vs. DB:Swiss
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.647e-55
Identity = 96/194 (49.48%), Postives = 131/194 (67.53%), Query Frame = 1
Query:  340 RPPPDLPSLLLNGRIIYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVLW--RGQE 915
            +PPPDL S L   RI+Y+GM LVP+VTEL++AE +YLQY D ++PIY+YINSTGTT+ +GE +G +TE FAIYD M  +K  I T+ VG A G+A LLL+AG  G R  +P +  MI+QP     G   A+DV I  KE+   +  +VKL +KH G S E +   M+RP Y   T+A E+G+ID+V++  RG +
Sbjct:  101 QPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-NGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQG--QATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQ 291          
BLAST of Phvul.006G089800.3 vs. DB:Swiss
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR1 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 3.353e-53
Identity = 90/191 (47.12%), Postives = 129/191 (67.54%), Query Frame = 1
Query:  328 HRPTRPPPDLPSLLLNGRIIYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIP-SSGLMPASDVLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRV 897
             RP   PPDLPSLLL+ RI Y+GMP+VPAVTEL+VA+ M+L Y +P +PIY+YINS GT  +  ETVG ETE +AI D++   K++++T+  G A GQA +LLS G  G R + PH+   +  P++  SSG   A D+ I+AKE+  N    ++LLAK TG S+E +   ++RP Y+ A  A ++G+ D++
Sbjct:  163 ERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSG--AAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADKI 351          
BLAST of Phvul.006G089800.3 vs. DB:Swiss
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=clpR PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.159e-50
Identity = 83/184 (45.11%), Postives = 123/184 (66.85%), Query Frame = 1
Query:  379 RIIYIGMPLVPA----------VTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVL 900
            RIIY+GMPL  +          VTEL++A+L+YL++ +P++PIY YINSTGT+   G+ +G ETE FAI D+M  +K  +HT+ +G A+G A ++LS GTPG R  +PHA  ++ QPR  + G   ASD+ IRAKEV+ N+  ++++ A++TG   + +A    R  YM   +A E+G+IDRVL
Sbjct:   33 RIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPRTGAQG--QASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQAVEYGLIDRVL 214          
BLAST of Phvul.006G089800.3 vs. DB:Swiss
Match: CLPP_THEYD (ATP-dependent Clp protease proteolytic subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) OX=289376 GN=clpP PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.727e-41
Identity = 78/183 (42.62%), Postives = 113/183 (61.75%), Query Frame = 1
Query:  352 DLPSLLLNGRIIYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVL 900
            D+ S LL  RII+IG  +   V  +V+A+L++LQ  DP++ I+IYINS G         GM + G AIYD+M  +K +I T  +G A   AC+LL+AGT GKRF +PH++ MI QP     G   A+DV I AKE++  ++ L  +LAKHTG   E +     R ++M A +AK +G++D V+
Sbjct:   19 DIYSRLLKDRIIFIGTEINDHVANVVIAQLLFLQTEDPEKDIHIYINSPG---------GMVSSGLAIYDTMQYVKPDIATYCIGQASSMACVLLAAGTKGKRFALPHSRVMIHQPIGGFYG--QATDVEIHAKEILKMKDLLNNILAKHTGQPIEKIQKDTERDFFMSAEEAKLYGIVDEVI 190          
BLAST of Phvul.006G089800.3 vs. DB:Swiss
Match: CLPP_AQUAE (ATP-dependent Clp protease proteolytic subunit OS=Aquifex aeolicus (strain VF5) OX=224324 GN=clpP PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.579e-40
Identity = 73/185 (39.46%), Postives = 116/185 (62.70%), Query Frame = 1
Query:  352 DLPSLLLNGRIIYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVLWR 906
            D+ S LL  RI+ +G P+   V  L+VA+L++L+  DP + IY+YINS G         G  T G AIYD+M  +K ++ T+ +G A     +LL+AG PGKR+ +PH++ MI QP     G   A+D++I A+E+   +  L+ +LAKHTG  ++ +AN + R Y+M   +AK++G+ID+V+ +
Sbjct:   26 DIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPG---------GSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMIHQPLGGIQG--QATDIIIHAEEIKRIKEMLIDILAKHTGQPKDKIANDIERDYFMSPYEAKDYGLIDKVIEK 199          
BLAST of Phvul.006G089800.3 vs. DB:Swiss
Match: CLPP_CARHZ (ATP-dependent Clp protease proteolytic subunit OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=clpP PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.991e-39
Identity = 73/183 (39.89%), Postives = 112/183 (61.20%), Query Frame = 1
Query:  352 DLPSLLLNGRIIYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVL 900
            D+ S LL  R I+IG P+   V  LV+A++++L+  DP++ I++YINS G         G+ T G AIYD+M  +K ++ T+ +G A      LL+AG  GKRF +P+A+ MI QP     G   A+D+ I A+E++  R+ L +LL KHTG  +E +     R ++M A +AKE+G+ID V+
Sbjct:   20 DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPG---------GVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGVQG--QATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIIDEVI 191          
BLAST of Phvul.006G089800.3 vs. DB:Swiss
Match: CLPP_THESQ (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp. (strain RQ2) OX=126740 GN=clpP PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 7.511e-39
Identity = 72/183 (39.34%), Postives = 114/183 (62.30%), Query Frame = 1
Query:  352 DLPSLLLNGRIIYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVL 900
            D+ S LL  RI+++G P+   V  LV+A+L++L+  DP + +Y+YINS G         G  T G AIYD+M  +K ++ T+ VG A   A +LL+AG  GKR+ +P+A+ MI QP   + G  PA DV I  +E++  ++ L ++L+KHTG   E +     R ++M A +AKE+G++D+V+
Sbjct:   28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG--PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199          
BLAST of Phvul.006G089800.3 vs. DB:Swiss
Match: CLPP_THEP1 (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) OX=390874 GN=clpP PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 7.511e-39
Identity = 72/183 (39.34%), Postives = 114/183 (62.30%), Query Frame = 1
Query:  352 DLPSLLLNGRIIYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVL 900
            D+ S LL  RI+++G P+   V  LV+A+L++L+  DP + +Y+YINS G         G  T G AIYD+M  +K ++ T+ VG A   A +LL+AG  GKR+ +P+A+ MI QP   + G  PA DV I  +E++  ++ L ++L+KHTG   E +     R ++M A +AKE+G++D+V+
Sbjct:   28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG--PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199          
The following BLAST results are available for this feature:
BLAST of Phvul.006G089800.3 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
CLPR3_ARATH3.805e-18083.57ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPR_SYNY31.709e-5845.19Putative ATP-dependent Clp protease proteolytic su... [more]
CLPR4_ARATH2.647e-5549.48ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPR1_ARATH3.353e-5347.12ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPR_SYNE76.159e-5045.11Putative ATP-dependent Clp protease proteolytic su... [more]
CLPP_THEYD3.727e-4142.62ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AQUAE1.579e-4039.46ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CARHZ2.991e-3939.89ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THESQ7.511e-3939.34ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THEP17.511e-3939.34ATP-dependent Clp protease proteolytic subunit OS=... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 219..238
score: 37.5
coord: 118..133
score: 37.66
coord: 198..215
score: 40.28
coord: 278..297
score: 37.38
coord: 158..178
score: 33.81
IPR001907ATP-dependent Clp protease proteolytic subunitCDDcd07017S14_ClpP_2coord: 127..299
e-value: 6.90288E-77
score: 231.176
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 121..300
e-value: 1.4E-43
score: 148.9
NoneNo IPR availableGENE3D3.90.226.10coord: 94..304
e-value: 5.5E-52
score: 178.3
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 113..300

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.006G089800.3_Pv_G19833_v2.1

>Phvul.006G089800.3_Pv_G19833_v2.1 ID=Phvul.006G089800.3_Pv_G19833_v2.1; Name=Phvul.006G089800.3_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=330bp
MIGGTMMAAYLRVPMLTFSQSSTATTRRCRNQRTRCSVNAATNTAKIPMP
PLNPKDPFLSKLASVAASSPETFLNPPRNSDTPPFLDIFDSPTLMATPAQ
VERSVSYNEHRPTRPPPDLPSLLLNGRIIYIGMPLVPAVTELVVAELMYL
QYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVA
VGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRA
KEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVL
WRGQEKIMADVAPPEDWDKGAGINIVDEF*
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mRNA from alignment at Chr06:20122526..20125776-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.006G089800.3_Pv_G19833_v2.1 ID=Phvul.006G089800.3_Pv_G19833_v2.1; Name=Phvul.006G089800.3; organism=Phaseolus vulgaris; type=mRNA; length=3251bp; location=Sequence derived from: Chr06:20122526..20125776- (Phaseolus vulgaris
TTCTGGTTGAAACCTGGTTGAAGTGTTGCACAGTATGATAGGTGGAACCA TGATGGCTGCGTATTTGCGTGTTCCCATGCTCACCTTCTCACAATCTTCC ACGGCTACGACAAGGAGATGCAGAAATCAGAGAACTCGTTGCTCCGTTAA CGCCGCCACCAACACAGCCAAAATTCCAATGCCTCCTCTCAACCCTAAAG ACCCATTTCTCTCCAAGCTCGCCTCCGTCGCCGCCTCTTCCCCCGAAACG TTCCTTAACCCTCCCCGGAACTCCGACACCCCCCCTTTTCTCGACATCTT TGATTCCCCCACACTCATGGCTACTCCGGCTCAAGTAATTATATATTCAT TACCACTTTCTTTCACTGTTGTGTCAATACTGGGTTTGGTTAGGTTTTTT GGTTACATAACGTGCTACTTACTACTTTGTGAAAAGATTTGAAATTAGAA TTTAGTGTCCCAGCTTTTTTATTAGAATTAGTTAAACATGCGGTGGTGAA AGAGATTGAATAATTTTTTTTTGGAGAAGTTGTGTTTGGTTAAACTTTTA GATAAATAGATGTAATATGAGAAGGAAATGAGAAGGAAAAATGAAATAAA TTTGAACTTATGCCCAGGTTAAAAAATCATCTCCTACAGAAGCTAATATG TAGAAGTACTCGTTGCAATTGGTTTATGTATAGGTTGTTACTCTTTGCTT ATCTGTTGGTGTAACTCGAACAATTGTGTGGTTTGAATTAGGTTGAAAGG TCTGTTTCATACAATGAACATCGGCCCACAAGGCCGCCGCCGGACCTGCC TTCGCTGCTTCTCAATGGTAGAATTATTTACATTGGGATGCCTGTAAGTG TTCAGTGGTGCTTTGATTTTTGTGCTCTTGCATTTGGTTCTAGTTAATAT TTTACTGTTGTAATTTGTACAACCTTATATGACTCTTTCTGCGTTTCAGT TGGTTCCGGCTGTCACAGAGCTTGTTGTTGCGGAATTGATGTACTTGCAG TATATGGATCCTAAAGAGCCAATTTATATTTACATAAATTCCACTGGGAC TACTCGAGATGATGGTGAAACGGTAATTTGTTTCTGCCTTGCTGTTTATA TGAAATGTTTGATGTACCATGGGCTCTTTTTTCATGTGCTTTTGTTATCT GTGGTTTAAGATAATCTGTAAAGCTGACTGTCTGCCTTTCTCCTTTTTTA TCCTCATACATTTTGAGTTCTTGCGTTCAGGTAGGCATGGAGACAGAAGG TTTTGCCATTTATGATTCAATGATGCAGTTAAAGAACGAGGTTTGTTTGC TTTTATTGATTATCTACTTGTGTGCCTCGTTGAGTTCTATTAGTGATGGT ATTTGGTAGTAATGACGCGAACAGATTGTGGGTTGCCTTGGGTTTCTGGA ATACTTGAATAATGATTGGGAAATCATGGTATCAACTTTTGGGTGTTTTA TGGATACCTTTTGCTACTGGTAGCATGGTGGCAATTCCTTGTATACCCCA CTTTAAGTTTTATTGGTATATGACCTGGCATTAATGTTTATGACTTAATC AGAGTAACTTATTTTTAAACAATTATGATGGACAGCAGGGTAATTACCTT TCTTCTAAGCATTATGCATTCTTATTCTACCTTGCTGAGCTGTTTTTTTT CTTTCTTTTCACTAAGATTTTGAATATATCTTTTGTCGTGTATTTGGCTT TGGCATCCTGAGCAGATACACACAGTGGCTGTTGGAGCTGCCATAGGTCA AGCCTGTTTGCTACTTTCAGCAGGGACTCCGGGTAAACGCTTTATGATGC CACATGCTAAAGGTAAAGTTGGGATTTAACTTTGTAGCTTTGTTCCTTTA ATTCCTTGTAGATGTAATAGTTGTCTATTGATATCTGTTTCAGCTATGAT TCAGCAGCCTCGTATCCCATCTTCTGGGTTGATGCCTGCAAGTGATGTTC TTATTCGTGCAAAGGAGGTTAGCCTACATTGCTTTTTCTATATTGGAGTT TTTATCATTAGGAATGACAAAAAACTTTGTTCCTCAAATGGTTATGGTTG TTTGGCAATCAGCTTGTAATACTGCCTAACTATTTTTCTCGTGAAAAGAA GTTTCAATAGAATGCTTTATTCATGCTGAAGCTTTTATAGTACGTCCAAT TAGAATTCAAGAGACTCATATAACTTCCATATTTTAAATACAACCTCTTG ATGAAATTCCTTGGTTGCAGATTTGCCCCAAATTTTTTTGCAATTTTTCT TTCTTTTTAAACCTAGTTTCGATGAGTTTTAGAGTGCCTTTCTAGTTTAC GATTTAATACTTTACCTTCACTCAAATTTTAAATGTAATATCTTGATGGA ATTCATAGTCACATATTCGGCCATATCTTTGAGAGCAATTCTTCATTTTA TATAACTGTGAATCAGAACATCTTATTTTCCCCTCCTTTCTTTCTCTTTG ATTTTTTTATTTTAACCCTAAACAATGTCTAATTTTATCTTTAAATCTGT TTATTTACAATCGTTTTATTTTGCAGGTGATAATTAACAGAAACAATCTG GTTAAACTACTGGCCAAACACACAGGAAATGTGAGTATCATGCACAGGTA GTGAATCTCATACATATTCAAGAAAGATGAGGTCAAATCTTATATTTCTG TTATTTGCGTTTTTTCTAAATTACCAGTCAGAGGAAACAGTTGCTAATGT GATGAGGAGGCCATATTATATGGATGCAACAAAGGCTAAGGAATTTGGGG TCATTGACAGAGTAAGTGCTTATTTATGTAGTGTGAATGGGTTGTCTAGT ATATTCTCTTGAACATGCATTGCTGACCAAGCCAATGCTGGAATACTGTT CCCAGGTTCTTTGGCGTGGCCAGGAAAAGATTATGGCAGATGTTGCTCCT CCAGAGGACTGGGACAAGGGTGCTGGTATTAACATTGTAGATGAATTCTA GTTCCTCTTTTGTGGATACGTACTTGTCAATGTAAGTGAATCATATTTTC CTCACTCATTTGGTCACTGTAAAATGTGGAATCTTCGGTTTTTTGTGACA ATGCTTCCTCCTTTTTTGGGGTGGCCGTGGGGGATACAAAGGGGTTTGCT GCTTCAGTTTTGGCATTGAGAACCAAGTGAAGCTCCTAAACTGCTGTGAG AATGCAGCATACATGGTGGTGTTAGGAAAAGTAGAAAACGAGCTCTGAAT TGTTTAAACAAAGATGTAAATCCATATTAATTTGAACTAGTTCAAAACAT A
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Coding sequence (CDS) from alignment at Chr06:20122526..20125776-

>Phvul.006G089800.3_Pv_G19833_v2.1 ID=Phvul.006G089800.3_Pv_G19833_v2.1; Name=Phvul.006G089800.3; organism=Phaseolus vulgaris; type=CDS; length=990bp; location=Sequence derived from: Chr06:20122526..20125776- (Phaseolus vulgaris
ATGATAGGTGGAACCATGATGGCTGCGTATTTGCGTGTTCCCATGCTCAC
CTTCTCACAATCTTCCACGGCTACGACAAGGAGATGCAGAAATCAGAGAA
CTCGTTGCTCCGTTAACGCCGCCACCAACACAGCCAAAATTCCAATGCCT
CCTCTCAACCCTAAAGACCCATTTCTCTCCAAGCTCGCCTCCGTCGCCGC
CTCTTCCCCCGAAACGTTCCTTAACCCTCCCCGGAACTCCGACACCCCCC
CTTTTCTCGACATCTTTGATTCCCCCACACTCATGGCTACTCCGGCTCAA
GTTGAAAGGTCTGTTTCATACAATGAACATCGGCCCACAAGGCCGCCGCC
GGACCTGCCTTCGCTGCTTCTCAATGGTAGAATTATTTACATTGGGATGC
CTTTGGTTCCGGCTGTCACAGAGCTTGTTGTTGCGGAATTGATGTACTTG
CAGTATATGGATCCTAAAGAGCCAATTTATATTTACATAAATTCCACTGG
GACTACTCGAGATGATGGTGAAACGGTAGGCATGGAGACAGAAGGTTTTG
CCATTTATGATTCAATGATGCAGTTAAAGAACGAGATACACACAGTGGCT
GTTGGAGCTGCCATAGGTCAAGCCTGTTTGCTACTTTCAGCAGGGACTCC
GGGTAAACGCTTTATGATGCCACATGCTAAAGCTATGATTCAGCAGCCTC
GTATCCCATCTTCTGGGTTGATGCCTGCAAGTGATGTTCTTATTCGTGCA
AAGGAGGTGATAATTAACAGAAACAATCTGGTTAAACTACTGGCCAAACA
CACAGGAAATTCAGAGGAAACAGTTGCTAATGTGATGAGGAGGCCATATT
ATATGGATGCAACAAAGGCTAAGGAATTTGGGGTCATTGACAGAGTTCTT
TGGCGTGGCCAGGAAAAGATTATGGCAGATGTTGCTCCTCCAGAGGACTG
GGACAAGGGTGCTGGTATTAACATTGTAGATGAATTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
IPR029045ClpP/crotonase-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis