Homology
BLAST of rna-TanjilR_23545 vs. DB:Swiss
Match:
DOF51_ARATH (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV=1)
HSP 1 Score: 147.902 bits (372), Expect = 2.459e-39
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 2
Query: 350 MRPGSMADRARLAKLPPPETALKCPRCDSINTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGC 562
+RPGSMA+RARLA +P PETALKCPRCDS NTKFCYFNNYSLTQPRHFCK CRRYWTRGGALR+VPVGGGC
Sbjct: 74 IRPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGC 144
BLAST of rna-TanjilR_23545 vs. DB:Swiss
Match:
DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV=1)
HSP 1 Score: 140.969 bits (354), Expect = 2.226e-37
Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 2
Query: 350 MRPGSMADRARLAKLPPPETALKCPRCDSINTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGC 562
+R GSM DRAR A + PE ALKCPRC+S NTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGC
Sbjct: 68 IRAGSMVDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGC 138
BLAST of rna-TanjilR_23545 vs. DB:Swiss
Match:
DOF36_ARATH (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV=2)
HSP 1 Score: 138.658 bits (348), Expect = 1.261e-36
Identity = 62/86 (72.09%), Postives = 69/86 (80.23%), Query Frame = 2
Query: 302 PPQASLSGGGGATVGSMRPGSMADRARLAKLPPPETALKCPRCDSINTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGG 559
PP + ++G A R SM +RAR+AK+P PE AL CPRCDS NTKFCYFNNYSLTQPRHFCKTCRRYWTRGG+LRNVPVGGG
Sbjct: 44 PPTSQVAGSSQA-----RVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGG 124
BLAST of rna-TanjilR_23545 vs. DB:Swiss
Match:
DOF22_ARATH (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV=2)
HSP 1 Score: 137.502 bits (345), Expect = 5.690e-36
Identity = 136/316 (43.04%), Postives = 171/316 (54.11%), Query Frame = 2
Query: 254 HHQVNGNGSPQMLPPLPPQASLSGGGGATVG-SMRPGSMADRARLAK-LPPPETALKCPRCDSINTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXAIPSGGTTHELIGHMTQPPNLPFMASLQNQMNRYGVANMAGLNLREIQGQT-----------DHMGFQIXXXXXXXXXXXXXXXXL--EQWRSQQFPFMNGFESTSVTSYPFQNENVEANSGFVGDIAASSRVYNQQPPVKMEENRALNLLR--SSMSNTVSENNQYYSWTDLSGLPSSTTASH 1150
HHQV + PQ P P + TV S G A+RARLAK PPE ALKCPRCDS NTKFCYFNNY+LTQPRHFCK CRRYWTRGGALRNVPVGGGCRRNKK K SKS SSS+ + +S +A T++ + +Q PF+ +LQN G+ GLNL I G + +GF G ++ G+ L S F F+ T + Y F N E N G + I A +RV +Q VKME+N N+ R S +++ +++NQY WT GLP S++ H
Sbjct: 41 HHQVLSHHFPQN--PNPNHHHVETAAATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGKSGNSKSSSSSQNKQSTSMVNATSPTNTSNVQLQTNSQ---FPFLPTLQNLTQLGGI----GLNLAAINGNNGGNGNTSSSFLNDLGFFHGGNTSGPVMGNNNENNLMTSLGSSSHFAL---FDRT-MGLYNFPN---EVNMG-LSSIGA-TRV-SQTAQVKMEDNHLGNISRPVSGLTSPGNQSNQY--WTG-QGLPGSSSNDH 334
BLAST of rna-TanjilR_23545 vs. DB:Swiss
Match:
DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)
HSP 1 Score: 134.42 bits (337), Expect = 7.423e-35
Identity = 130/342 (38.01%), Postives = 161/342 (47.08%), Query Frame = 2
Query: 242 SNQNH-----HQVNGNGS---------PQMLPPL-----PPQASLSGGGGATVGSMRPGSMADRARLAKLPPPETALKCPRCDSINTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXAIPSGG---TTHELIGHMTQPPNLPFMASLQNQMNRYGVANMAGLNLREIQGQT-----------DHMGFQ--------IXXXXXXXXXXXXXXXXLEQWRSQQFPFMNGFESTSVTSYPFQNE-NVEANSGFVGDIAA--SSRVYNQQPPVKMEENRALNLLRSSMSNTVSENNQY--YSW--TDLSG 1123
+N NH HQ+N NGS LPPL P ++ G + S GSMA+RAR A +PP LKCPRCDS NTKFCY+NNY+LTQPRHFCK CRRYWT+GGALRNVPVGGGCRRN K ++ + SSS + SS + PS G T H+ PF +L N G+ GLNL G +GF + + + L PF +T + ++ QN+ N+ N G G + SRVY Q PPVKMEE L L +S S NQ Y W +D SG
Sbjct: 3 TNSNHQHHLQHQLNENGSIISGHGLVLSHQLPPLQANPNPNHHHVATSAG--LPSRMGGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNHQ----------FPFSPTLYNLTQLGGI----GLNLAATNGNNQAHQIGSSLMMSDLGFLHGRNTSTPMTGNIHENNNNNNNENNLMASVGSLSPFALFDPTTGLYAF--QNDGNIGNNVGISGSSTSMVDSRVY-QTPPVKMEEQPNLANLSRPVSGLTSPGNQTNQYFWPGSDFSG 325
BLAST of rna-TanjilR_23545 vs. DB:Swiss
Match:
DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)
HSP 1 Score: 118.242 bits (295), Expect = 1.447e-29
Identity = 46/55 (83.64%), Postives = 52/55 (94.55%), Query Frame = 2
Query: 398 PPETALKCPRCDSINTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGC 562
PPE AL+CPRCDS NTKFCY+NNYSLTQPR+FCK+CRRYWT+GG LRN+PVGGGC
Sbjct: 50 PPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGC 104
BLAST of rna-TanjilR_23545 vs. DB:Swiss
Match:
DOF4_ORYSJ (Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 SV=1)
HSP 1 Score: 112.464 bits (280), Expect = 3.123e-27
Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 2
Query: 329 GGATVGSMR--PGSMADRARLAKLPPPETALKCPRCDSINTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGC 562
GGA +R +R +P PE A+KCPRC+S NTKFCY+NNY+L+QPRHFCK+CRRYWT+GG LRNVPVGGGC
Sbjct: 16 GGAAAADIRRAQAQQGPASRCGGIPSPE-AVKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 94
BLAST of rna-TanjilR_23545 vs. DB:Swiss
Match:
DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)
HSP 1 Score: 108.997 bits (271), Expect = 7.751e-27
Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 2
Query: 398 PPETALKCPRCDSINTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGG 559
P + LKCPRCDS NTKFCY+NNY+L+QPRHFCK CRRYWT+GGALRN+PVGGG
Sbjct: 28 PEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGG 81
BLAST of rna-TanjilR_23545 vs. DB:Swiss
Match:
DOF47_ARATH (Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana OX=3702 GN=DOF4.7 PE=1 SV=1)
HSP 1 Score: 109.768 bits (273), Expect = 1.299e-26
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 2
Query: 389 KLPPPET--ALKCPRCDSINTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGG 556
K P P T LKCPRCDS+NTKFCY+NNYSL+QPRH+CK CRRYWTRGGALRNVP+GG
Sbjct: 31 KEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGG 88
BLAST of rna-TanjilR_23545 vs. DB:Swiss
Match:
DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana OX=3702 GN=DOF5.7 PE=2 SV=1)
HSP 1 Score: 111.309 bits (277), Expect = 1.498e-26
Identity = 44/50 (88.00%), Postives = 49/50 (98.00%), Query Frame = 2
Query: 413 LKCPRCDSINTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGC 562
LKCPRC+S NTKFCY+NNYSL+QPRHFCK+CRRYWTRGGALRNVP+GGGC
Sbjct: 41 LKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGC 90
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23545 vs. DB:Swiss
Analysis Date: 2020-01-28 (
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot )
Total hits: 10
100 200 300 400 500 600 700 800 900 1000 1100 Expect = 2.46e-39 / Id = 88.73 Expect = 2.23e-37 / Id = 84.51 Expect = 1.26e-36 / Id = 72.09 Expect = 5.69e-36 / Id = 43.04 Expect = 7.42e-35 / Id = 38.01 Expect = 1.45e-29 / Id = 83.64 Expect = 3.12e-27 / Id = 62.50 Expect = 7.75e-27 / Id = 79.63 Expect = 1.30e-26 / Id = 79.31 Expect = 1.50e-26 / Id = 88.00 Sequence DOF51_ARATH DOF24_ARATH DOF36_ARATH DOF22_ARATH DOF11_ARATH DOF53_ARATH DOF4_ORYSJ DOF17_ARATH DOF47_ARATH DOF57_ARATH
Match Name E-value Identity Description
DOF51_ARATH 2.459e-39 88.73 Dof zinc finger protein DOF5.1 OS=Arabidopsis thal... [more]
DOF24_ARATH 2.226e-37 84.51 Dof zinc finger protein DOF2.4 OS=Arabidopsis thal... [more]
DOF36_ARATH 1.261e-36 72.09 Dof zinc finger protein DOF3.6 OS=Arabidopsis thal... [more]
DOF22_ARATH 5.690e-36 43.04 Dof zinc finger protein DOF2.2 OS=Arabidopsis thal... [more]
DOF11_ARATH 7.423e-35 38.01 Dof zinc finger protein DOF1.1 OS=Arabidopsis thal... [more]
DOF53_ARATH 1.447e-29 83.64 Dof zinc finger protein DOF5.3 OS=Arabidopsis thal... [more]
DOF4_ORYSJ 3.123e-27 62.50 Dof zinc finger protein 4 OS=Oryza sativa subsp. j... [more]
DOF17_ARATH 7.751e-27 79.63 Dof zinc finger protein DOF1.7 OS=Arabidopsis thal... [more]
DOF47_ARATH 1.299e-26 79.31 Dof zinc finger protein DOF4.7 OS=Arabidopsis thal... [more]
DOF57_ARATH 1.498e-26 88.00 Dof zinc finger protein DOF5.7 OS=Arabidopsis thal... [more]
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>rna-TanjilR_23545_La_Tanjil_v1.0 ID=rna-TanjilR_23545_La_Tanjil_v1.0; Name=rna-TanjilR_23545; organism=Lupinus angustifolius; type=mRNA; length=1159bp ATGGTTTTCTCTTCTATTCCACTCTATGTAGATCCTCCCAATTGGCACCA GGTAAGATTATTTTTCCTCAAATTTCAGCCACAGCttctcaacttttttt tttcaaaaggaagTTTTTTCAAAAGATAATTATTCCTATTCCTCCTTTAT AATATCTCCTTGAATATACCAGAGTTTTTTTCCCATCATAATAACTCAAC caaatttcttttttctcttgatCTGCTTAATTTTGCAGCAATCAAACCAG AACCATCATCAAGTGAATGGAAATGGTAGCCCTCAGATGCTTCCACCTTT GCCCCCACAGGCATCTCTTTCTGGAGGTGGAGGTGCGACTGTGGGGTCAA TGAGGCCGGGCTCGATGGCAGATCGAGCCCGGCTAGCTAAGTTGCCTCCT CCTGAGACCGCTTTAAAGTGTCCTCGTTGCGACTCCATCAACACTAAATT CTGCTACTTCAACAACTACAGCCTCACGCAACCACGCCACTTCTGCAAGA CTTGTAGGCGTTACTGGACTAGAGGTGGTGCTCTCAGAAACGTTCCTGTG GGTGGAGGATGCCGTAGAAACAAGAAGAATAAAAGGAGTCGCTCTAAATC TCCATCATCATCTGAGAAACAAACCCTTTCTAGTTCCACAAGTGCAATCC CTTCAGGTGGTACCACTCATGAGCTTATTGGTCACATGACTCAACCACCT AACCTTCCTTTCATGGCCTCTCTACAGAACCAGATGAACCGTTATGGTGT TGCAAACATGGCTGGTCTGAACTTACGTGAGATTCAAGGACAAACGGATC ACATGGGGTTTCAAATTGGTTGTGGTAGTAATTCAGGTGCTGGCGgcagt ggtggtggtggtggattGGAGCAGTGGCGGTCACAGCAGTTTCCTTTCAT GAATGGTTTTGAGTCAACTTCAGTTACTTCATACCCTTTTCaaaatgaga atgttgaagCAAATTCTGGGTTTGTTGGAGATATAGCTGCAAGTTCCAGG GTTTATAATCAGCAACCACCAGTTAAAATGGAAGAGAATAGAGCTCTAAA TTTGTTAAGATCATCTATGAGTAATACCGTCTCAGAAAATAACCAATACT ATTCATGGACTGATTTATCAGGTCTTCCTTCTTCAACTACTGCTAGTCAT CTCTTGTGA back to top protein sequence of rna-TanjilR_23545_La_Tanjil_v1.0
>rna-TanjilR_23545_La_Tanjil_v1.0 ID=rna-TanjilR_23545_La_Tanjil_v1.0; Name=rna-TanjilR_23545_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=323bp MVFSSIPLYVDPPNWHQQSNQNHHQVNGNGSPQMLPPLPPQASLSGGGGA TVGSMRPGSMADRARLAKLPPPETALKCPRCDSINTKFCYFNNYSLTQPR HFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPSSSEKQTLSSS TSAIPSGGTTHELIGHMTQPPNLPFMASLQNQMNRYGVANMAGLNLREIQ GQTDHMGFQIGCGSNSGAGGSGGGGGLEQWRSQQFPFMNGFESTSVTSYP FQNENVEANSGFVGDIAASSRVYNQQPPVKMEENRALNLLRSSMSNTVSE NNQYYSWTDLSGLPSSTTASHLL back to top mRNA from alignment at Chr_LG08-CM007368.1:23992186..23993344+
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_23545_La_Tanjil_v1.0 ID=rna-TanjilR_23545_La_Tanjil_v1.0; Name=rna-TanjilR_23545; organism=Lupinus angustifolius; type=mRNA; length=1159bp; location=Sequence derived from: Chr_LG08-CM007368.1:23992186..23993344+ (Lupinus angustifoliusATGGTTTTCTCTTCTATTCCACTCTATGTAGATCCTCCCAATTGGCACCA
G GTAAGATTATTTTTCCTCAAATTTCAGCCACAGCttctcaacttttttt
tttcaaaaggaagTTTTTTCAAAAGATAATTATTCCTATTCCTCCTTTAT
AATATCTCCTTGAATATACCAGAGTTTTTTTCCCATCATAATAACTCAAC
caaatttcttttttctcttgatCTGCTTAATTTTGCAGCAATCAAACCAG
AACCATCATCAAGTGAATGGAAATGGTAGCCCTCAGATGCTTCCACCTTT
GCCCCCACAGGCATCTCTTTCTGGAGGTGGAGGTGCGACTGTGGGGTCAA
TGAGGCCGGGCTCGATGGCAGATCGAGCCCGGCTAGCTAAGTTGCCTCCT
CCTGAGACCGCTTTAAAGTGTCCTCGTTGCGACTCCATCAACACTAAATT
CTGCTACTTCAACAACTACAGCCTCACGCAACCACGCCACTTCTGCAAGA
CTTGTAGGCGTTACTGGACTAGAGGTGGTGCTCTCAGAAACGTTCCTGTG
GGTGGAGGATGCCGTAGAAACAAGAAGAATAAAAGGAGTCGCTCTAAATC
TCCATCATCATCTGAGAAACAAACCCTTTCTAGTTCCACAAGTGCAATCC
CTTCAGGTGGTACCACTCATGAGCTTATTGGTCACATGACTCAACCACCT
AACCTTCCTTTCATGGCCTCTCTACAGAACCAGATGAACCGTTATGGTGT
TGCAAACATGGCTGGTCTGAACTTACGTGAGATTCAAGGACAAACGGATC
ACATGGGGTTTCAAATTGGTTGTGGTAGTAATTCAGGTGCTGGCGgcagt
ggtggtggtggtggattGGAGCAGTGGCGGTCACAGCAGTTTCCTTTCAT
GAATGGTTTTGAGTCAACTTCAGTTACTTCATACCCTTTTCaaaatgaga
atgttgaagCAAATTCTGGGTTTGTTGGAGATATAGCTGCAAGTTCCAGG
GTTTATAATCAGCAACCACCAGTTAAAATGGAAGAGAATAGAGCTCTAAA
TTTGTTAAGATCATCTATGAGTAATACCGTCTCAGAAAATAACCAATACT
ATTCATGGACTGATTTATCAGGTCTTCCTTCTTCAACTACTGCTAGTCAT
CTCTTGTGA back to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:23992186..23993344+
>rna-TanjilR_23545_La_Tanjil_v1.0 ID=rna-TanjilR_23545_La_Tanjil_v1.0; Name=rna-TanjilR_23545; organism=Lupinus angustifolius; type=CDS; length=972bp; location=Sequence derived from: Chr_LG08-CM007368.1:23992186..23993344+ (Lupinus angustifolius ATGGTTTTCTCTTCTATTCCACTCTATGTAGATCCTCCCAATTGGCACCA GCAATCAAACCAGAACCATCATCAAGTGAATGGAAATGGTAGCCCTCAGA TGCTTCCACCTTTGCCCCCACAGGCATCTCTTTCTGGAGGTGGAGGTGCG ACTGTGGGGTCAATGAGGCCGGGCTCGATGGCAGATCGAGCCCGGCTAGC TAAGTTGCCTCCTCCTGAGACCGCTTTAAAGTGTCCTCGTTGCGACTCCA TCAACACTAAATTCTGCTACTTCAACAACTACAGCCTCACGCAACCACGC CACTTCTGCAAGACTTGTAGGCGTTACTGGACTAGAGGTGGTGCTCTCAG AAACGTTCCTGTGGGTGGAGGATGCCGTAGAAACAAGAAGAATAAAAGGA GTCGCTCTAAATCTCCATCATCATCTGAGAAACAAACCCTTTCTAGTTCC ACAAGTGCAATCCCTTCAGGTGGTACCACTCATGAGCTTATTGGTCACAT GACTCAACCACCTAACCTTCCTTTCATGGCCTCTCTACAGAACCAGATGA ACCGTTATGGTGTTGCAAACATGGCTGGTCTGAACTTACGTGAGATTCAA GGACAAACGGATCACATGGGGTTTCAAATTGGTTGTGGTAGTAATTCAGG TGCTGGCGgcagtggtggtggtggtggattGGAGCAGTGGCGGTCACAGC AGTTTCCTTTCATGAATGGTTTTGAGTCAACTTCAGTTACTTCATACCCT TTTCaaaatgagaatgttgaagCAAATTCTGGGTTTGTTGGAGATATAGC TGCAAGTTCCAGGGTTTATAATCAGCAACCACCAGTTAAAATGGAAGAGA ATAGAGCTCTAAATTTGTTAAGATCATCTATGAGTAATACCGTCTCAGAA AATAACCAATACTATTCATGGACTGATTTATCAGGTCTTCCTTCTTCAAC TACTGCTAGTCATCTCTTGTGA back to top