rna-TanjilR_23520

Transcript Overview


Name	rna-TanjilR_23520
Unique Name	rna-TanjilR_23520_La_Tanjil_v1.0
Type	mRNA
Organism	Lupinus angustifolius (blue lupin)
Sequence length	2305
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_LG08-CM007368.1	supercontig	Chr_LG08-CM007368.1:24148252..24150556 +	Lupinus angustifolius L. Tanjil genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Lupinus angustifolius L. Tanjil genome v1.0	2019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.0	2020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot	2020-01-28

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ananL124	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananL254	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananL544	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananL595	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananL607	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ancaiR1271	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ancaiR1332	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ancaiR1336	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ancaiR1340	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ancaiR1343	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
anccR1392	Cajanus cajan Asha genome v1.0	Cajanus cajan
anccR1451	Cajanus cajan Asha genome v1.0	Cajanus cajan
ancaR1096	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ancaR1148	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ancrR1285	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ancrR1340	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ancrR1345	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
anpsR0946	Pisum sativum Cameor genome v1a	Pisum sativum
anpsR0965	Pisum sativum Cameor genome v1a	Pisum sativum
anpsR0973	Pisum sativum Cameor genome v1a	Pisum sativum
anpvR1275	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anpvR1286	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anvuR1084	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anvuR1110	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anasR1274	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anzwsR1079	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
anzwsR1115	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
anvfhR1126	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
antifR1117	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvfhR1179	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
antifR1165	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvfhR1192	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
antifR1178	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvrvR1072	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvrvR1089	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvuaR1036	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvuaR1065	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvssR1223	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
anvssR1234	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ancanR1001	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
ancanR1047	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
anavjR1191	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjR1247	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
ancarR1060		Cicer arietinum
ancarR1105		Cicer arietinum
anccaR1056	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anccaR1080	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anvumR1276	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvumR1283	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvvaR1155	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvvaR1188	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvvaR1192	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvstR1266	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvasR1275	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvasR1283	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvstR1275	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvunR1045	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
anvunR1072	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
anpvfR1313	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
anpvfR1340	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
Psat07G0570700-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
rna-XM_004486918.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
Vfaba.Tiffany.R1.6g029600.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
jg43407.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vigun05g261800.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
Phvul.L008743.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
rna-XM_014642606.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
PvulFLAVERTChr05.956	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Cr_14521.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
XM_058918048.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
rna-XM_004507087.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
Va05G051810.3	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vigan.07G046400.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
jg9014.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vfaba.Hedin2.R1.1g031560.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Cr_01112.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
evm.model.Chr05.2464.2.62113179	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Ca_02641	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Psat05G0789300-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
Cc_v2.0_23515.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Vum_07G00369.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Ca_16263	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
XM_058879102.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
Vfaba.Tiffany.R1.1g021400.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
Vigun05g261800.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Vfaba.Hedin2.R1.6g037600.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Vigst.07G034500.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
LR48_mrnaVigan05g193100	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
rna-KK1_013917	Cajanus cajan Asha genome v1.0	Cajanus cajan
Psat7g211920.1	Pisum sativum Cameor genome v1a	Pisum sativum
Ca_18566.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
rna-TanjilR_29756	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_04486	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_17219	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-TanjilG_23520	gene-TanjilG_23520_La_Tanjil_v1.0	Lupinus angustifolius	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_23520	rna-TanjilR_23520_La_Tanjil_v1.0-protein	Lupinus angustifolius	polypeptide
rna-TanjilR_23520_La_Tanjil_v1.0	rna-TanjilR_23520_La_Tanjil_v1.0	Lupinus angustifolius	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_23520_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24148252..24150237	rna-TanjilR_23520_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24148252..24150237	Lupinus angustifolius	exon
rna-TanjilR_23520_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24150323..24150556	rna-TanjilR_23520_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24150323..24150556	Lupinus angustifolius	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_23520_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24148252..24150237	rna-TanjilR_23520_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24148252..24150237	Lupinus angustifolius	CDS
rna-TanjilR_23520_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24150323..24150556	rna-TanjilR_23520_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24150323..24150556	Lupinus angustifolius	CDS

Homology

The following BLAST results are available for this feature:

BLAST of rna-TanjilR_23520 vs.

BLAST of rna-TanjilR_23520 vs.
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021916	Protein of unknown function DUF3527	PFAM	PF12043	DUF3527	coord: 430..544 e-value: 4.6E-11 score: 42.9 coord: 581..705 e-value: 1.8E-38 score: 133.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 376..398
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..241

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_LG08-CM007368.1:24148252..24150556+
coding sequence from alignment at Chr_LG08-CM007368.1:24148252..24150556+

mRNA sequence

>rna-TanjilR_23520_La_Tanjil_v1.0 ID=rna-TanjilR_23520_La_Tanjil_v1.0; Name=rna-TanjilR_23520; organism=Lupinus angustifolius; type=mRNA; length=2305bp
ATGTCAAATTTACCAGGTTACTTAGAGAGGGagaaaaagaatgagaagaT
TTTGAATGTTGGAGTTCTTGATTGGAAGCATCTAGAACAATGGAAGTACA
ACCATAAGCATGTTCCACATAGAAGTAGCACGAGTTCAACATATACTAGC
AACACATCCTCTTATGTTTCAGAAGAAAGGTTATCTGGTTATAGTTCTTG
CCCTTATGGTCAAAGGATACTCCGGCCATCCTTGAAATCTCACTTTATGG
CATCTCCAATTCAAGGCCACTCCGATGCTATCAAATCCTCTCGAGACAGT
GTTGGAAATTGTCAGAATTTTAGAGGCAGGCACAATGATATTGGCACACA
CAGCAAATATTTGGATGACAATCTTTTCCAGGAAGATCCTAATAGTAGAT
TAAAAGGATGTGATAAGAAATATTTGGATCCATATATTGATAAGGAACGT
GACAACATTCCAAATGACCGAATGCATTACGAAGCAGCATCATGTGCTAG
GCTGGGAAAAAGCACTCAAGATGGTGGAATGGAAGGAAGAGTGGATACTT
TGAGAGAACCAGATACTGATACAGTTTTGCGAAGAACCCTCAGCAAAAGC
AAGCCATTTGATCTTCGTTTGACTCGAGACAGTCCGAAGAACAATCATTA
TAGATTTCCTCATATGCCGAAATCCACAATTCAGAAGTCAGAAAATTCTA
GTCGATCGAGCTTTCCAGAAACACCTAAGGAACTTTCCCCTAAAGATTTC
AACTTTGATATTTCGCACTCCTGTCCTCTTCCGGTTGAACTTAGTTGTAA
CAATTTTCAGCTTAAAGGATCAGGCCAAAGTTCCACAGACCTGGAAAGCA
TCAAATTTTCTGCTTCTACTTTTTCATCACCCTTATCTACTACTTACTCA
GTCAAAATGGGAATAAGCCCTTCTAGATCAACAAAAGCTGAGGAAAGGAA
AGAAACCACAACCCGAACTACTTCTGCAAATTTGTCTCTCCAGGGATTAG
ACCAGAAAGTAACATCTGACAAGTCAAGAAGCTCTTCACCATTTCGGCGA
TTGAGCATTAGCATTGGTTATACAAGCAAAGGGCCTGCCTATAAAAGGGA
TGACCATGTGCCACATTTGAGCTCCATAGAAGCTCGTAAATCCAGTTCCA
AAAATGTAAGGGGCTATGCTAGCTCAAACATTTCAGCCAATGATAAACCT
GGTGATGCAGACAGAAAAAGGTCAAGCCCTTTAAGGAGGTTACTTGATCC
ATTGCTGAAACCAAAACCAAATGCCAAGAAGTATGTTCCATCAGTGACTC
GAGCTCTTCTGAAAATTGTCGTGAGGAATGACCTACCTCTTTTCACATTT
GCTGTTGATAATACCAGAGACGTTCTTGCAGCCACTGTGAAGAACTTAAG
TGCCATAGGAAACGATGAATGCCACAGTATTTATACCATTTTCACGTTTA
GAGAGGTTAAGAAGAAGAATAGAAGTTGGATTAATCAAGCAAACAGAAGC
AAAGGTCCTGATTACATTCCTCATGGTGTTGCCCAAATGAAGGTTTCTGA
TTCACACGATTATGATCTAGCCAGACAGAATTGTGCGGACTCGTCGACTA
CAAAAgagtttgttttgttttctgtAAATCTAAGGCAACGGAATGCTGAG
GCCATTGACTATCAGCCAAATGACGAGCTTGCTGCTATTGTTGTCAAAAT
ACCTAAAGCAATAAGTTGCATCAATAGCTGTCATCAGAGCAGTTTCCAGA
GCGATAGTCAAGACCCTATGCATGCAACAGTTTTGCTCCCAAGTGGAGTT
CATAGCCTTCCAAGTCAAGGTGGACCTTCATCGCTGATTGAACGGTGGAA
ATCAGGTGGGTCATGTGACTGTGGTGGTTGGGATTTGGCTTGCAAACTTC
AAGTTATTGCTACTGAAAATCAACCCGGCCAAAAACCAACATCATCCAAA
GCTTATTTAGCCAACCAACTAGAGCTTTTCATGCAGGTACTTTTTTGTTT
GGTTAAACTTATTTTTGTACTCATCATTGTTGATTATTAATTTTCCCTAT
CCTTTTCATTGCTAAACACAGGGGAATGATCAAGAGCAGCAATGCGCTTT
CAGTTTTACACAATTTAAGCACGGAATGTATTCAATAGCCTTCGATTCAT
CGCTCTCTATTTTGCAAGCTTTCTCTATTTGCATCGCCTTAGTGGATAGC
AAGACGCCAAATGACCTTTCTGGATCAATAAACTCCACAGAAGATAAAAA
CCAATGGGAAACACTATTAATGCAAGCTAAGGAAGTAGGAACTAAAGGCA
TTTAG

protein sequence of rna-TanjilR_23520_La_Tanjil_v1.0

>rna-TanjilR_23520_La_Tanjil_v1.0 ID=rna-TanjilR_23520_La_Tanjil_v1.0; Name=rna-TanjilR_23520_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=739bp
MSNLPGYLEREKKNEKILNVGVLDWKHLEQWKYNHKHVPHRSSTSSTYTS
NTSSYVSEERLSGYSSCPYGQRILRPSLKSHFMASPIQGHSDAIKSSRDS
VGNCQNFRGRHNDIGTHSKYLDDNLFQEDPNSRLKGCDKKYLDPYIDKER
DNIPNDRMHYEAASCARLGKSTQDGGMEGRVDTLREPDTDTVLRRTLSKS
KPFDLRLTRDSPKNNHYRFPHMPKSTIQKSENSSRSSFPETPKELSPKDF
NFDISHSCPLPVELSCNNFQLKGSGQSSTDLESIKFSASTFSSPLSTTYS
VKMGISPSRSTKAEERKETTTRTTSANLSLQGLDQKVTSDKSRSSSPFRR
LSISIGYTSKGPAYKRDDHVPHLSSIEARKSSSKNVRGYASSNISANDKP
GDADRKRSSPLRRLLDPLLKPKPNAKKYVPSVTRALLKIVVRNDLPLFTF
AVDNTRDVLAATVKNLSAIGNDECHSIYTIFTFREVKKKNRSWINQANRS
KGPDYIPHGVAQMKVSDSHDYDLARQNCADSSTTKEFVLFSVNLRQRNAE
AIDYQPNDELAAIVVKIPKAISCINSCHQSSFQSDSQDPMHATVLLPSGV
HSLPSQGGPSSLIERWKSGGSCDCGGWDLACKLQVIATENQPGQKPTSSK
AYLANQLELFMQGNDQEQQCAFSFTQFKHGMYSIAFDSSLSILQAFSICI
ALVDSKTPNDLSGSINSTEDKNQWETLLMQAKEVGTKGI

mRNA from alignment at Chr_LG08-CM007368.1:24148252..24150556+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-TanjilR_23520_La_Tanjil_v1.0 ID=rna-TanjilR_23520_La_Tanjil_v1.0; Name=rna-TanjilR_23520; organism=Lupinus angustifolius; type=mRNA; length=2305bp; location=Sequence derived from: Chr_LG08-CM007368.1:24148252..24150556+ (Lupinus angustifolius
ATGTCAAATTTACCAGGTTACTTAGAGAGGGagaaaaagaatgagaagaT
TTTGAATGTTGGAGTTCTTGATTGGAAGCATCTAGAACAATGGAAGTACA
ACCATAAGCATGTTCCACATAGAAGTAGCACGAGTTCAACATATACTAGC
AACACATCCTCTTATGTTTCAGAAGAAAGGTTATCTGGTTATAGTTCTTG
CCCTTATGGTCAAAGGATACTCCGGCCATCCTTGAAATCTCACTTTATGG
CATCTCCAATTCAAGGCCACTCCGATGCTATCAAATCCTCTCGAGACAGT
GTTGGAAATTGTCAGAATTTTAGAGGCAGGCACAATGATATTGGCACACA
CAGCAAATATTTGGATGACAATCTTTTCCAGGAAGATCCTAATAGTAGAT
TAAAAGGATGTGATAAGAAATATTTGGATCCATATATTGATAAGGAACGT
GACAACATTCCAAATGACCGAATGCATTACGAAGCAGCATCATGTGCTAG
GCTGGGAAAAAGCACTCAAGATGGTGGAATGGAAGGAAGAGTGGATACTT
TGAGAGAACCAGATACTGATACAGTTTTGCGAAGAACCCTCAGCAAAAGC
AAGCCATTTGATCTTCGTTTGACTCGAGACAGTCCGAAGAACAATCATTA
TAGATTTCCTCATATGCCGAAATCCACAATTCAGAAGTCAGAAAATTCTA
GTCGATCGAGCTTTCCAGAAACACCTAAGGAACTTTCCCCTAAAGATTTC
AACTTTGATATTTCGCACTCCTGTCCTCTTCCGGTTGAACTTAGTTGTAA
CAATTTTCAGCTTAAAGGATCAGGCCAAAGTTCCACAGACCTGGAAAGCA
TCAAATTTTCTGCTTCTACTTTTTCATCACCCTTATCTACTACTTACTCA
GTCAAAATGGGAATAAGCCCTTCTAGATCAACAAAAGCTGAGGAAAGGAA
AGAAACCACAACCCGAACTACTTCTGCAAATTTGTCTCTCCAGGGATTAG
ACCAGAAAGTAACATCTGACAAGTCAAGAAGCTCTTCACCATTTCGGCGA
TTGAGCATTAGCATTGGTTATACAAGCAAAGGGCCTGCCTATAAAAGGGA
TGACCATGTGCCACATTTGAGCTCCATAGAAGCTCGTAAATCCAGTTCCA
AAAATGTAAGGGGCTATGCTAGCTCAAACATTTCAGCCAATGATAAACCT
GGTGATGCAGACAGAAAAAGGTCAAGCCCTTTAAGGAGGTTACTTGATCC
ATTGCTGAAACCAAAACCAAATGCCAAGAAGTATGTTCCATCAGTGACTC
GAGCTCTTCTGAAAATTGTCGTGAGGAATGACCTACCTCTTTTCACATTT
GCTGTTGATAATACCAGAGACGTTCTTGCAGCCACTGTGAAGAACTTAAG
TGCCATAGGAAACGATGAATGCCACAGTATTTATACCATTTTCACGTTTA
GAGAGGTTAAGAAGAAGAATAGAAGTTGGATTAATCAAGCAAACAGAAGC
AAAGGTCCTGATTACATTCCTCATGGTGTTGCCCAAATGAAGGTTTCTGA
TTCACACGATTATGATCTAGCCAGACAGAATTGTGCGGACTCGTCGACTA
CAAAAgagtttgttttgttttctgtAAATCTAAGGCAACGGAATGCTGAG
GCCATTGACTATCAGCCAAATGACGAGCTTGCTGCTATTGTTGTCAAAAT
ACCTAAAGCAATAAGTTGCATCAATAGCTGTCATCAGAGCAGTTTCCAGA
GCGATAGTCAAGACCCTATGCATGCAACAGTTTTGCTCCCAAGTGGAGTT
CATAGCCTTCCAAGTCAAGGTGGACCTTCATCGCTGATTGAACGGTGGAA
ATCAGGTGGGTCATGTGACTGTGGTGGTTGGGATTTGGCTTGCAAACTTC
AAGTTATTGCTACTGAAAATCAACCCGGCCAAAAACCAACATCATCCAAA
GCTTATTTAGCCAACCAACTAGAGCTTTTCATGCAGGTACTTTTTTGTTT
GGTTAAACTTATTTTTGTACTCATCATTGTTGATTATTAATTTTCCCTAT
CCTTTTCATTGCTAAACACAGGGGAATGATCAAGAGCAGCAATGCGCTTT
CAGTTTTACACAATTTAAGCACGGAATGTATTCAATAGCCTTCGATTCAT
CGCTCTCTATTTTGCAAGCTTTCTCTATTTGCATCGCCTTAGTGGATAGC
AAGACGCCAAATGACCTTTCTGGATCAATAAACTCCACAGAAGATAAAAA
CCAATGGGAAACACTATTAATGCAAGCTAAGGAAGTAGGAACTAAAGGCA
TTTAG

Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24148252..24150556+

>rna-TanjilR_23520_La_Tanjil_v1.0 ID=rna-TanjilR_23520_La_Tanjil_v1.0; Name=rna-TanjilR_23520; organism=Lupinus angustifolius; type=CDS; length=2220bp; location=Sequence derived from: Chr_LG08-CM007368.1:24148252..24150556+ (Lupinus angustifolius
ATGTCAAATTTACCAGGTTACTTAGAGAGGGagaaaaagaatgagaagaT
TTTGAATGTTGGAGTTCTTGATTGGAAGCATCTAGAACAATGGAAGTACA
ACCATAAGCATGTTCCACATAGAAGTAGCACGAGTTCAACATATACTAGC
AACACATCCTCTTATGTTTCAGAAGAAAGGTTATCTGGTTATAGTTCTTG
CCCTTATGGTCAAAGGATACTCCGGCCATCCTTGAAATCTCACTTTATGG
CATCTCCAATTCAAGGCCACTCCGATGCTATCAAATCCTCTCGAGACAGT
GTTGGAAATTGTCAGAATTTTAGAGGCAGGCACAATGATATTGGCACACA
CAGCAAATATTTGGATGACAATCTTTTCCAGGAAGATCCTAATAGTAGAT
TAAAAGGATGTGATAAGAAATATTTGGATCCATATATTGATAAGGAACGT
GACAACATTCCAAATGACCGAATGCATTACGAAGCAGCATCATGTGCTAG
GCTGGGAAAAAGCACTCAAGATGGTGGAATGGAAGGAAGAGTGGATACTT
TGAGAGAACCAGATACTGATACAGTTTTGCGAAGAACCCTCAGCAAAAGC
AAGCCATTTGATCTTCGTTTGACTCGAGACAGTCCGAAGAACAATCATTA
TAGATTTCCTCATATGCCGAAATCCACAATTCAGAAGTCAGAAAATTCTA
GTCGATCGAGCTTTCCAGAAACACCTAAGGAACTTTCCCCTAAAGATTTC
AACTTTGATATTTCGCACTCCTGTCCTCTTCCGGTTGAACTTAGTTGTAA
CAATTTTCAGCTTAAAGGATCAGGCCAAAGTTCCACAGACCTGGAAAGCA
TCAAATTTTCTGCTTCTACTTTTTCATCACCCTTATCTACTACTTACTCA
GTCAAAATGGGAATAAGCCCTTCTAGATCAACAAAAGCTGAGGAAAGGAA
AGAAACCACAACCCGAACTACTTCTGCAAATTTGTCTCTCCAGGGATTAG
ACCAGAAAGTAACATCTGACAAGTCAAGAAGCTCTTCACCATTTCGGCGA
TTGAGCATTAGCATTGGTTATACAAGCAAAGGGCCTGCCTATAAAAGGGA
TGACCATGTGCCACATTTGAGCTCCATAGAAGCTCGTAAATCCAGTTCCA
AAAATGTAAGGGGCTATGCTAGCTCAAACATTTCAGCCAATGATAAACCT
GGTGATGCAGACAGAAAAAGGTCAAGCCCTTTAAGGAGGTTACTTGATCC
ATTGCTGAAACCAAAACCAAATGCCAAGAAGTATGTTCCATCAGTGACTC
GAGCTCTTCTGAAAATTGTCGTGAGGAATGACCTACCTCTTTTCACATTT
GCTGTTGATAATACCAGAGACGTTCTTGCAGCCACTGTGAAGAACTTAAG
TGCCATAGGAAACGATGAATGCCACAGTATTTATACCATTTTCACGTTTA
GAGAGGTTAAGAAGAAGAATAGAAGTTGGATTAATCAAGCAAACAGAAGC
AAAGGTCCTGATTACATTCCTCATGGTGTTGCCCAAATGAAGGTTTCTGA
TTCACACGATTATGATCTAGCCAGACAGAATTGTGCGGACTCGTCGACTA
CAAAAgagtttgttttgttttctgtAAATCTAAGGCAACGGAATGCTGAG
GCCATTGACTATCAGCCAAATGACGAGCTTGCTGCTATTGTTGTCAAAAT
ACCTAAAGCAATAAGTTGCATCAATAGCTGTCATCAGAGCAGTTTCCAGA
GCGATAGTCAAGACCCTATGCATGCAACAGTTTTGCTCCCAAGTGGAGTT
CATAGCCTTCCAAGTCAAGGTGGACCTTCATCGCTGATTGAACGGTGGAA
ATCAGGTGGGTCATGTGACTGTGGTGGTTGGGATTTGGCTTGCAAACTTC
AAGTTATTGCTACTGAAAATCAACCCGGCCAAAAACCAACATCATCCAAA
GCTTATTTAGCCAACCAACTAGAGCTTTTCATGCAGGGGAATGATCAAGA
GCAGCAATGCGCTTTCAGTTTTACACAATTTAAGCACGGAATGTATTCAA
TAGCCTTCGATTCATCGCTCTCTATTTTGCAAGCTTTCTCTATTTGCATC
GCCTTAGTGGATAGCAAGACGCCAAATGACCTTTCTGGATCAATAAACTC
CACAGAAGATAAAAACCAATGGGAAACACTATTAATGCAAGCTAAGGAAG
TAGGAACTAAAGGCATTTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR021916	DUF3527

Search form

rna-TanjilR_23520