rna-TanjilR_23366

Transcript Overview
Namerna-TanjilR_23366
Unique Namerna-TanjilR_23366_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1518
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG08-CM007368.1supercontigChr_LG08-CM007368.1:25202122..25203639 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL254Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL393Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL607Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1338Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1354Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR1448Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1455Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR1147Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1161Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1343Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0980Pisum sativum Cameor genome v1aPisum sativum
anpvR1276Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1287Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1085Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1092Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1201Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR1055Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1120Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvfhR1107Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1099Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1188Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR1194Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1175Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR1181Vicia faba cv. Tiffany genome v1.0Vicia faba
anvrvR1053Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1071Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1037Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR1046Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1232Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1233Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1290Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR1046Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR1055Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1191Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1251Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1109Cicer arietinum
ancarR1124Cicer arietinum
anccaR1080Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1084Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1226Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1276Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1162Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR1187Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR1191Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR1214Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1226Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1266Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1275Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR1046Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1055Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1313Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1320Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.06G216900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_004505551.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_014667279.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg8292.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.6g049720.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_021632Cajanus cajan Asha genome v1.0Cajanus cajan
Cr_16524.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
PvulFLAVERTChr11.125Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va08G070790.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_11212Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun11g204500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.6g060360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan08g198600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vum_06G01808.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_17203.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigan.06G251000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_08827.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun11g204500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat07G0384500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
evm.model.Chr11.1862.1.62113174Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.011G020600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_17443Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_23366gene-TanjilG_23366_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23366rna-TanjilR_23366_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_23366_La_Tanjil_v1.0rna-TanjilR_23366_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23366_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:25202122..25203639rna-TanjilR_23366_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:25202122..25203639Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23366_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:25202122..25203639rna-TanjilR_23366_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:25202122..25203639Lupinus angustifoliusexon


Homology
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: SCL7_POPEU (SCARECROW-LIKE protein 7 OS=Populus euphratica OX=75702 GN=SCL7 PE=2 SV=1)

HSP 1 Score: 457.988 bits (1177), Expect = 2.647e-155
Identity = 249/383 (65.01%), Postives = 299/383 (78.07%), Query Frame = 1
Query:  370 PLLKSLIDCAALIQTSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKD-RNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515
            P+LK+ ++CA L+++  D+A+ SL  L +SVS++G+  +RV FYFV+ L R++ +    D +NF        T SEE TL YKALNDACPYSKFAHLTANQAILE TE ++ IHIVDFGIVQGIQWAALLQA ATRS+GKP  + ISGIPA  LG +PA SL A+G RL +FAKLL LNFEF PIL+PI ELNE  F V+P+E LAVNFMLQLYNLL +  G     AV TAL +AKSL P+IVTLGEYE S+  R G+L RFK AL+Y++AVFESLDPN+  D  ERLQVE LLLGRRI+  +G +  G  RERME+KEQWRVLMES+GFESV LSHYA+SQAKILLWNY+YS+LYSL +S+P FL+LAW +VPLLTVSSWR
Sbjct:  220 PVLKAFVECAQLVESKVDQAVKSLIKLKESVSENGDPGERVGFYFVQGLCRRVAVGELDDLKNFH------QTTSEEFTLSYKALNDACPYSKFAHLTANQAILEATEKASKIHIVDFGIVQGIQWAALLQALATRSAGKPVRIRISGIPAPVLGKNPAASLLATGNRLLDFAKLLDLNFEFEPILTPIQELNESCFRVEPDEVLAVNFMLQLYNLLGETPG-----AVETALKMAKSLNPRIVTLGEYEVSL-NRVGYLTRFKNALRYYTAVFESLDPNMSRDSQERLQVERLLLGRRISGVLGPD--GIRRERMENKEQWRVLMESSGFESVSLSHYAMSQAKILLWNYNYSTLYSLDDSQPAFLTLAWNEVPLLTVSSWR 588          
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: SCL4_ARATH (Scarecrow-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SCL4 PE=1 SV=1)

HSP 1 Score: 433.335 bits (1113), Expect = 1.307e-145
Identity = 238/382 (62.30%), Postives = 289/382 (75.65%), Query Frame = 1
Query:  370 PLLKSLIDCAALIQTSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515
            PLLK++ DCA +  + P+ A  +L  + +SVS+ G+ T+RVAFYF EAL+ +L   +          +  S+ +E+L L YK LNDACPYSKFAHLTANQAILE TE S  IHIVDFGIVQGIQW ALLQA ATR+SGKP  + +SGIPA +LG SP  SL A+G RL +FAK+L LNF+F PIL+PIH LN  SF V P+E LAVNFMLQLY LLD+       T V TAL LAKSL P++VTLGEYE S+  R GF NR K AL+++SAVFESL+PNL  D  ER++VE  L GRRI+  +G E  G  RERME+KEQWRVLME+AGFESV LS+YA+SQAKILLWNY+YS+LYS+VES+PGF+SLAW D+PLLT+SSWR
Sbjct:  216 PLLKAIYDCARISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSPA-------TSSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDE-----TPTIVDTALRLAKSLNPRVVTLGEYEVSL-NRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHRERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSWR 584          
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: SCL7_ARATH (Scarecrow-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=SCL7 PE=1 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 1.059e-129
Identity = 227/387 (58.66%), Postives = 276/387 (71.32%), Query Frame = 1
Query:  367 HPLLKSLIDCAALIQTSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAE----VPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515
             P+ K++ D A   +T PD    +L  + +SVS+ G+  QRV +YF EAL+ K   E E      +  +  S+  E+  L YK LNDACPYSKFAHLTANQAILE T  S +IHIVDFGI QGIQW+ALLQA ATRSSGKP  + ISGIPA +LG SP  SL A+G RL +FA +L LNFEF P+L+PI  LN  SF V P+E L VNFML+LY LLD+      +T V TAL LA+SL P+IVTLGEYE S+  R  F NR K +L+++SAVFESL+PNL  D  ERL+VE +L GRRI   V ++     PG+    ME+KEQWRVLME AGFE V  S+YA+SQAK+LLWNY+YS+LYSLVESEPGF+SLAW +VPLLTVSSWR
Sbjct:  175 QPIFKAIHDYARKPETKPD----TLIRIKESVSESGDPIQRVGYYFAEALSHK---ETE------SPSSSSSSSLEDFILSYKTLNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDE-----TATTVGTALRLARSLNPRIVTLGEYEVSL-NRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542          
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: SCL7_ORYSJ (SCARECROW-LIKE protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=SCL7 PE=1 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 1.109e-124
Identity = 209/387 (54.01%), Postives = 260/387 (67.18%), Query Frame = 1
Query:  370 PLLKSLIDCAALIQTSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPIST-----ISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515
            P+L+SL+ C+    T P  A   L  +  + +  G+ ++R+AFYF +AL+R+L           TG  P +       S+ELTLCYK LNDACPYSKFAHLTANQAILE T  +T IHIVDFGIVQGIQWAALLQA ATR  GKP  + I+G+P+  LG  PA SL+A+  RL +FAKLLG++FEF P+L P+HELN+  F V+P+EA+AVNFMLQLY+LL D +       V   L LAKSL P +VTLGEYE S+  R GF++RF  AL Y+ ++FESLD  +  D PER++VE  + G RI  AVG E      ERM    +W+ LME  GFE V LS+YA SQA +LLWNY     YSLVE  P FLSLAW+  PLLTVS+WR
Sbjct:  206 PILQSLLSCSRAAATDPGLAAAELASVRAAATDAGDPSERLAFYFADALSRRLACG--------TGAPPSAEPDARFASDELTLCYKTLNDACPYSKFAHLTANQAILEATGAATKIHIVDFGIVQGIQWAALLQALATRPEGKPTRIRITGVPSPLLGPQPAASLAATNTRLRDFAKLLGVDFEFVPLLRPVHELNKSDFLVEPDEAVAVNFMLQLYHLLGDSD-----ELVRRVLRLAKSLSPAVVTLGEYEVSL-NRAGFVDRFANALSYYRSLFESLDVAMTRDSPERVRVERWMFGERIQRAVGPEEGADRTERMAGSSEWQTLMEWCGFEPVPLSNYARSQADLLLWNYDSKYKYSLVELPPAFLSLAWEKRPLLTVSAWR 578          
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana OX=3702 GN=RGL2 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 5.319e-53
Identity = 136/388 (35.05%), Postives = 214/388 (55.15%), Query Frame = 1
Query:  373 LLKSLIDCA-ALIQTSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGI-PAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILS-PIHELNEKSFCVKP-NEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDG--FLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVR-ERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515
            L+ +L+ CA A+ Q + + A   +  +            +VA YF +AL R++  +   + +    V P  +  E L + +    ++CPY KFAH TANQAILE    +  +H++D G+ QG+QW AL+QA A R  G P S  ++GI P     T  ++SL   G +L++FA+ +G+ FEF+ + +  + +L  + F  +P +E L VN + +L+ LL      A S ++   LN  K++KP IVT+ E EA+    +G  FL+RF  AL Y+S++F+SL+ +      +R+  E + LGR+I   V AE  GS R ER E   QWR+ M+SAGF+ + L   A  QA + L +   +     VE   G L + W+  PL+T S+W+
Sbjct:  180 LVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAETDVCAAVNP--SFEEVLEMHFY---ESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPP-SFRLTGIGPPQ---TENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLL------ARSGSIEKLLNTVKAIKPSIVTVVEQEAN---HNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSE-VYLGRQILNVVAAE--GSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASM-LLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545          
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR2 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.570e-51
Identity = 140/380 (36.84%), Postives = 191/380 (50.26%), Query Frame = 1
Query:  385 LIDCAALIQTSPDRALHSLT-HLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTA--LNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVR-ERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSW 1512
            LI CA  ++     A+  +   L K VS  G   +R+  Y VE L  +L          +    P S+   +L      L +ACPY KF +++AN AI E  +G   IHI+DF I QG QW +LLQA A R  G P +V I+GI       +    L   G+RLS  A L  + FEF P+     ++      V P EALAVNF L+L+++ D    ++ STA H    L + KSL PK++TL E E++  T   F  RF   L Y++A+FES+D  LP D  ER+ +E   L R I   +  E  G  R ER E   +W+  +  AGF    LS  ++  A I     SYS  Y L E + G L L WK  PL+  S+W
Sbjct:  178 LIACARAVEEKNSFAIDMMIPELRKIVSVSGEPLERLGAYMVEGLVARLASSGISIYKALKCKEPKSS---DLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPP-TVRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFHPLAISGSKVEAAHLGVIPGEALAVNFTLELHHIPD----ESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAP-FPQRFAETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACE--GEERAERYEPFGKWKARLTMAGFRPSPLS--SLVNATIRTLLQSYSDNYKLAERD-GALYLGWKSRPLVVSSAW 543          
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 6.511e-48
Identity = 130/385 (33.77%), Postives = 181/385 (47.01%), Query Frame = 1
Query:  373 LLKSLIDCAALIQTSPDRALHSLTH-LTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGV-APISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTA--LNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515
            L   L+ CA  +  +     HS+   L + VS  G   QR+  Y +E L  +L          +     P ST   EL      L + CPY KF +++AN AI E  +    +HI+DF I QG QW  L+QAFA R  G P  + I+GI  M    +    LS  G RL++ AK   + FEF  +   + E+  K+  V+P EALAVNF   L+++ D    ++ ST  H    L + KSL PK+VTL E E++  T   F  RF   + Y++A+FES+D  LP D  +R+ VE   L R +   +  E    V ER E   +WR     AGF    LS    S  K         S    +E   G L L W    L+   +W+
Sbjct:  119 LRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPAST---ELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPR-IRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPD----ESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNT-AAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRV-ERHELLGKWRSRFGMAGFTPYPLSPLVNSTIK---SLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490          
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum OX=4081 GN=GAI PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.687e-46
Identity = 138/418 (33.01%), Postives = 206/418 (49.28%), Query Frame = 1
Query:  334 PLTPVTPHSAPHPLLKSLIDCAALIQ----TSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKA-LNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGI-PAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRP-ILSPIHELNEKSFCVKPN--EALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFE--------------SLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVR-ERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515
            P+  V        L+ +L+ CA  +Q    T  D+ +  +  L  +VSQ G   ++VA YF EAL R+           I  + P  ++    T   +    + CPY KFAH TANQAILE   G   +H++DF + QG+QW AL+QA A R  G P +  ++GI P     T   ++L   G +L++ A+ +G+ FEFR  + + + +L+     ++P+  EA+A+N + +L+ LL      +   A+   LN  K + PKIVTL E EA+      F++RF  AL Y+S +F+               + P  P +  + L +  + LGR+I   V  E  GS R ER E   QWRV M S+GF+ V L   A  QA + L           VE   G L L W   PL+  S+W+
Sbjct:  186 PVVLVDSQETGVRLVHTLMACAEAVQQENLTLADQLVRHIGIL--AVSQSG-AMRKVATYFAEALARR-----------IYKIYPQDSMESSYTDVLQMHFYETCPYLKFAHFTANQAILEAFTGCNKVHVIDFSLKQGMQWPALMQALALRPGGPP-AFRLTGIGPPQPDNT---DALQQVGWKLAQLAETIGVEFEFRGFVANSLADLDATILDIRPSETEAVAINSVFELHRLL------SRPGAIEKVLNSIKQINPKIVTLVEQEAN-HNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVN-NQDLVMSEVYLGRQICNVVACE--GSDRVERHETLNQWRVRMNSSGFDPVHLGSNAFKQASM-LLALFAGGDGYRVEENDGCLMLGWHTRPLIATSAWK 574          
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera OX=29760 GN=GAI1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.824e-46
Identity = 131/389 (33.68%), Postives = 203/389 (52.19%), Query Frame = 1
Query:  373 LLKSLIDCAALIQTSPDRALHSLTHLTK--SVSQHGNHTQRVAFYFVEALTRKL-ELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRP-ILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDG--FLNRFKAALKYFSAVFESLDPN--LPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515
            L+ +L+ CA  +Q    +   +L       +VSQ G   ++VA YF E L R++  L  +K  +        S+ S+ L + +    + CPY KFAH TANQAILE  EG   +H++DF + QG+QW AL+QA A R  G P S  ++GI   +  T   + L   G +L++ A+ + + FE+R  + + + +L+     ++  E++AVN + +L++LL      A    +   L+  K +KP IVT+ E EA+    +G  FL+RF  +L Y+S +F+SL+     P +  ++L  E + LG++I   V  E P  V ER E   QWR  + SAGF+ V L   A  QA + L           VE   G L L W   PL+  S+W+
Sbjct:  214 LVHTLMACAEAVQQENLKLAEALVKQIGFLAVSQAGA-MRKVATYFAEGLARRIYRLYPDKPLD--------SSFSDILQMHFY---ETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMKQGMQWPALMQALALRPGGPP-SFRLTGIGPPS--TDNTDHLHEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRDGESVAVNSVFELHSLL------ARPGGIERVLSAVKDMKPDIVTIVEQEAN---HNGPVFLDRFTESLHYYSTLFDSLEGCGVSPVNTQDKLMSE-VYLGQQICNVVACEGPERV-ERHETLAQWRARLGSAGFDPVNLGSNAFKQASM-LLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQ 575          
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.115e-46
Identity = 123/398 (30.90%), Postives = 183/398 (45.98%), Query Frame = 1
Query:  325 FKPPLTPVTPHSAPHPLLKSLID-CAALIQTSPDRALHSLTHLTKSV-SQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSW 1512
            F+P          P  ++K L+  CA  +        H L    + V S +G   QR+  Y +E L  +         N    +      S+EL    + L + CPY KF ++ AN AI E      +IHI+DF I QG QW  L+QA A R  G P  V I+GI       +    L   GK L   ++   +  EF P+     ++ ++   ++P EAL+VNF LQL++    DE    +      L + K L PK+ TL E E+   T   FL RF   ++Y+SA+FES+D NLP D  ER+ VE   L + I   +  E    V ER E   +W+  +  AGF    LS Y  S   ++    +  S    ++ + G + L W+   L++ S+W
Sbjct:  184 FRPEKRQRELREDPQIIVKQLLTRCAEALSEDRTEEFHKLVQEARGVVSINGEPIQRLGAYLLEGLVAR---HGNSGTNIYRALKCREPESKELLSYMRILYNICPYFKFGYMAANGAIAEALRTENNIHIIDFQIAQGTQWITLIQALAARPGGPPR-VRITGIDDPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFTPLSVYATQVTKEMLEIRPGEALSVNFTLQLHHT--PDESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNT-TPFLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRV-ERHELLGKWKSRLTMAGFRPYPLSSYVNS---VIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAW 570          
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
SCL7_POPEU2.647e-15565.01SCARECROW-LIKE protein 7 OS=Populus euphratica OX=... [more]
SCL4_ARATH1.307e-14562.30Scarecrow-like protein 4 OS=Arabidopsis thaliana O... [more]
SCL7_ARATH1.059e-12958.66Scarecrow-like protein 7 OS=Arabidopsis thaliana O... [more]
SCL7_ORYSJ1.109e-12454.01SCARECROW-LIKE protein 7 OS=Oryza sativa subsp. ja... [more]
RGL2_ARATH5.319e-5335.05DELLA protein RGL2 OS=Arabidopsis thaliana OX=3702... [more]
CIGR2_ORYSJ1.570e-5136.84Chitin-inducible gibberellin-responsive protein 2 ... [more]
PAT1_ARATH6.511e-4833.77Scarecrow-like transcription factor PAT1 OS=Arabid... [more]
GAI_SOLLC1.687e-4633.01DELLA protein GAI OS=Solanum lycopersicum OX=4081 ... [more]
GAI1_VITVI1.824e-4633.68DELLA protein GAI1 OS=Vitis vinifera OX=29760 GN=G... [more]
CIGR1_ORYSJ2.115e-4630.90Chitin-inducible gibberellin-responsive protein 1 ... [more]
back to top
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005202Transcription factor GRASPFAMPF03514GRAScoord: 126..505
e-value: 7.7E-103
score: 344.3
IPR005202Transcription factor GRASPROSITEPS50985GRAScoord: 116..505
score: 72.65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..42

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_23366_La_Tanjil_v1.0 ID=rna-TanjilR_23366_La_Tanjil_v1.0; Name=rna-TanjilR_23366; organism=Lupinus angustifolius; type=mRNA; length=1518bp
ATGGCATACATGTGTGCAGATAGTGGAAACCTTATGGCCATTGCTCAACA
ACTCATTAACCAAAAGCAACAACAAGATCAACAACACCAACACCAAAACC
AACACCAACACCAACACCAAAACCAGCACCACCTTTTTGGTATTACCCCT
CCTCTTTCATGGACCCCTTTCTCTGATTTTCATTACCCTTCTGATCCTTC
TTCCTTCCACTTCGACGACTTCGACGATGACTGGGTAGACTCCCTTATCC
CCACCACCACCACCACCACCACCGCCGCCAACGACAGTGCTGATCTTAAC
CGCCTCTTCTCACCAAATGACGCCTTCAAACCACCGCTAACGCCGGTTAC
TCCCCACTCTGCACCGCACCCACTTCTCAAATCTCTAATCGATTGTGCTG
CTCTCATACAAACTTCACCTGATCGTGCTCTTCACTCACTTACCCATTTA
ACCAAATCAGTGTCTCAACATGGGAACCATACCCAAAGAGTTGCTTTCTA
CTTTGTTGAAGCTCTCACTCGAAAACTTGAACTGGAGAATGAAAAAGATC
GTAACTTTATTACTGGGGTGGCTCCGATTAGTACTATTTCTGAGGAGTTA
ACACTGTGTTACAAGGCTCTCAATGATGCATGCCCTTATTCCAAGTTTGC
TCATTTAACCGCTAACCAAGCTATTCTTGAAGAAACTGAAGGTTCCACGC
ACATTCACATTGTTGATTTTGGAATTGTTCAAGGTATTCAATGGGCTGCT
TTGTTACAAGCTTTTGCAACTCGTTCTTCTGGGAAACCTGAAAGTGTAAC
CATTTCTGGGATTCCAGCTATGGCACTTGGAACTTCACCAGCTAATTCTC
TTTCTGCTTCTGGTAAACGTTTATCTGAGTTTGCAAAGCTTTTGGGCTTG
AATTTTGAGTTTAGACCAATTCTCAGTCCTATTCATGAGCTCAATGAAAA
AAGCTTTTGTGTGAAACCAAATGAAGCTTTGGCTGTTAATTTCATGCTTC
AGTTGTATAATCTATTGGATGATGATGAAGGTGATGCTGCTTCAACTGCA
GTTCACACTGCACTGAATTTGGCCAAGTCTTTGAAGCCTAAGATTGTTAC
TCTTGGAGAGTATGAGGCTAGTGTGACAACCCGGGATGGGTTTTTGAACA
GATTCAAGGCTGCATTGAAGTATTTCTCTGCAGTGTTCGAGTCTCTCGAT
CCTAATTTGCCTGCAGATTTGCCTGAGAGGTTGCAGGTGGAAAGCCTTTT
GCTTGGGCGCCGAATCGCTGCTGCGGTTGGAGCAGAGGTTCCCGGGAGTG
TAAGGGAAAGAATGGAGGATAAAGAGCAGTGGAGGGTGCTGATGGAAAGT
GCTGGTTTTGAATCAGTGGGTCTCAGTCATTATGCAATTAGTCAAGCTAA
GATTCTTCTATGGAATTATAGCTATAGCTCTCTGTATTCACTTGTTGAAT
CTGAACCTGGTTTTTTGTCTCTGGCTTGGAAAGATGTTCCTCTATTAACT
GTTTCTTCATGGCGTTAA
back to top

protein sequence of rna-TanjilR_23366_La_Tanjil_v1.0

>rna-TanjilR_23366_La_Tanjil_v1.0 ID=rna-TanjilR_23366_La_Tanjil_v1.0; Name=rna-TanjilR_23366_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=505bp
MAYMCADSGNLMAIAQQLINQKQQQDQQHQHQNQHQHQHQNQHHLFGITP
PLSWTPFSDFHYPSDPSSFHFDDFDDDWVDSLIPTTTTTTTAANDSADLN
RLFSPNDAFKPPLTPVTPHSAPHPLLKSLIDCAALIQTSPDRALHSLTHL
TKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEEL
TLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAA
LLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGL
NFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTA
VHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLD
PNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMES
AGFESVGLSHYAISQAKILLWNYSYSSLYSLVESEPGFLSLAWKDVPLLT
VSSWR
back to top

mRNA from alignment at Chr_LG08-CM007368.1:25202122..25203639-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_23366_La_Tanjil_v1.0 ID=rna-TanjilR_23366_La_Tanjil_v1.0; Name=rna-TanjilR_23366; organism=Lupinus angustifolius; type=mRNA; length=1518bp; location=Sequence derived from: Chr_LG08-CM007368.1:25202122..25203639- (Lupinus angustifolius
ATGGCATACATGTGTGCAGATAGTGGAAACCTTATGGCCATTGCTCAACA ACTCATTAACCAAAAGCAACAACAAGATCAACAACACCAACACCAAAACC AACACCAACACCAACACCAAAACCAGCACCACCTTTTTGGTATTACCCCT CCTCTTTCATGGACCCCTTTCTCTGATTTTCATTACCCTTCTGATCCTTC TTCCTTCCACTTCGACGACTTCGACGATGACTGGGTAGACTCCCTTATCC CCACCACCACCACCACCACCACCGCCGCCAACGACAGTGCTGATCTTAAC CGCCTCTTCTCACCAAATGACGCCTTCAAACCACCGCTAACGCCGGTTAC TCCCCACTCTGCACCGCACCCACTTCTCAAATCTCTAATCGATTGTGCTG CTCTCATACAAACTTCACCTGATCGTGCTCTTCACTCACTTACCCATTTA ACCAAATCAGTGTCTCAACATGGGAACCATACCCAAAGAGTTGCTTTCTA CTTTGTTGAAGCTCTCACTCGAAAACTTGAACTGGAGAATGAAAAAGATC GTAACTTTATTACTGGGGTGGCTCCGATTAGTACTATTTCTGAGGAGTTA ACACTGTGTTACAAGGCTCTCAATGATGCATGCCCTTATTCCAAGTTTGC TCATTTAACCGCTAACCAAGCTATTCTTGAAGAAACTGAAGGTTCCACGC ACATTCACATTGTTGATTTTGGAATTGTTCAAGGTATTCAATGGGCTGCT TTGTTACAAGCTTTTGCAACTCGTTCTTCTGGGAAACCTGAAAGTGTAAC CATTTCTGGGATTCCAGCTATGGCACTTGGAACTTCACCAGCTAATTCTC TTTCTGCTTCTGGTAAACGTTTATCTGAGTTTGCAAAGCTTTTGGGCTTG AATTTTGAGTTTAGACCAATTCTCAGTCCTATTCATGAGCTCAATGAAAA AAGCTTTTGTGTGAAACCAAATGAAGCTTTGGCTGTTAATTTCATGCTTC AGTTGTATAATCTATTGGATGATGATGAAGGTGATGCTGCTTCAACTGCA GTTCACACTGCACTGAATTTGGCCAAGTCTTTGAAGCCTAAGATTGTTAC TCTTGGAGAGTATGAGGCTAGTGTGACAACCCGGGATGGGTTTTTGAACA GATTCAAGGCTGCATTGAAGTATTTCTCTGCAGTGTTCGAGTCTCTCGAT CCTAATTTGCCTGCAGATTTGCCTGAGAGGTTGCAGGTGGAAAGCCTTTT GCTTGGGCGCCGAATCGCTGCTGCGGTTGGAGCAGAGGTTCCCGGGAGTG TAAGGGAAAGAATGGAGGATAAAGAGCAGTGGAGGGTGCTGATGGAAAGT GCTGGTTTTGAATCAGTGGGTCTCAGTCATTATGCAATTAGTCAAGCTAA GATTCTTCTATGGAATTATAGCTATAGCTCTCTGTATTCACTTGTTGAAT CTGAACCTGGTTTTTTGTCTCTGGCTTGGAAAGATGTTCCTCTATTAACT GTTTCTTCATGGCGTTAA
back to top

Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:25202122..25203639-

>rna-TanjilR_23366_La_Tanjil_v1.0 ID=rna-TanjilR_23366_La_Tanjil_v1.0; Name=rna-TanjilR_23366; organism=Lupinus angustifolius; type=CDS; length=1518bp; location=Sequence derived from: Chr_LG08-CM007368.1:25202122..25203639- (Lupinus angustifolius
ATGGCATACATGTGTGCAGATAGTGGAAACCTTATGGCCATTGCTCAACA
ACTCATTAACCAAAAGCAACAACAAGATCAACAACACCAACACCAAAACC
AACACCAACACCAACACCAAAACCAGCACCACCTTTTTGGTATTACCCCT
CCTCTTTCATGGACCCCTTTCTCTGATTTTCATTACCCTTCTGATCCTTC
TTCCTTCCACTTCGACGACTTCGACGATGACTGGGTAGACTCCCTTATCC
CCACCACCACCACCACCACCACCGCCGCCAACGACAGTGCTGATCTTAAC
CGCCTCTTCTCACCAAATGACGCCTTCAAACCACCGCTAACGCCGGTTAC
TCCCCACTCTGCACCGCACCCACTTCTCAAATCTCTAATCGATTGTGCTG
CTCTCATACAAACTTCACCTGATCGTGCTCTTCACTCACTTACCCATTTA
ACCAAATCAGTGTCTCAACATGGGAACCATACCCAAAGAGTTGCTTTCTA
CTTTGTTGAAGCTCTCACTCGAAAACTTGAACTGGAGAATGAAAAAGATC
GTAACTTTATTACTGGGGTGGCTCCGATTAGTACTATTTCTGAGGAGTTA
ACACTGTGTTACAAGGCTCTCAATGATGCATGCCCTTATTCCAAGTTTGC
TCATTTAACCGCTAACCAAGCTATTCTTGAAGAAACTGAAGGTTCCACGC
ACATTCACATTGTTGATTTTGGAATTGTTCAAGGTATTCAATGGGCTGCT
TTGTTACAAGCTTTTGCAACTCGTTCTTCTGGGAAACCTGAAAGTGTAAC
CATTTCTGGGATTCCAGCTATGGCACTTGGAACTTCACCAGCTAATTCTC
TTTCTGCTTCTGGTAAACGTTTATCTGAGTTTGCAAAGCTTTTGGGCTTG
AATTTTGAGTTTAGACCAATTCTCAGTCCTATTCATGAGCTCAATGAAAA
AAGCTTTTGTGTGAAACCAAATGAAGCTTTGGCTGTTAATTTCATGCTTC
AGTTGTATAATCTATTGGATGATGATGAAGGTGATGCTGCTTCAACTGCA
GTTCACACTGCACTGAATTTGGCCAAGTCTTTGAAGCCTAAGATTGTTAC
TCTTGGAGAGTATGAGGCTAGTGTGACAACCCGGGATGGGTTTTTGAACA
GATTCAAGGCTGCATTGAAGTATTTCTCTGCAGTGTTCGAGTCTCTCGAT
CCTAATTTGCCTGCAGATTTGCCTGAGAGGTTGCAGGTGGAAAGCCTTTT
GCTTGGGCGCCGAATCGCTGCTGCGGTTGGAGCAGAGGTTCCCGGGAGTG
TAAGGGAAAGAATGGAGGATAAAGAGCAGTGGAGGGTGCTGATGGAAAGT
GCTGGTTTTGAATCAGTGGGTCTCAGTCATTATGCAATTAGTCAAGCTAA
GATTCTTCTATGGAATTATAGCTATAGCTCTCTGTATTCACTTGTTGAAT
CTGAACCTGGTTTTTTGTCTCTGGCTTGGAAAGATGTTCCTCTATTAACT
GTTTCTTCATGGCGTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005202TF_GRAS