rna-TanjilR_23366
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: SCL7_POPEU (SCARECROW-LIKE protein 7 OS=Populus euphratica OX=75702 GN=SCL7 PE=2 SV=1) HSP 1 Score: 457.988 bits (1177), Expect = 2.647e-155 Identity = 249/383 (65.01%), Postives = 299/383 (78.07%), Query Frame = 1 Query: 370 PLLKSLIDCAALIQTSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKD-RNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515 P+LK+ ++CA L+++ D+A+ SL L +SVS++G+ +RV FYFV+ L R++ + D +NF T SEE TL YKALNDACPYSKFAHLTANQAILE TE ++ IHIVDFGIVQGIQWAALLQA ATRS+GKP + ISGIPA LG +PA SL A+G RL +FAKLL LNFEF PIL+PI ELNE F V+P+E LAVNFMLQLYNLL + G AV TAL +AKSL P+IVTLGEYE S+ R G+L RFK AL+Y++AVFESLDPN+ D ERLQVE LLLGRRI+ +G + G RERME+KEQWRVLMES+GFESV LSHYA+SQAKILLWNY+YS+LYSL +S+P FL+LAW +VPLLTVSSWR Sbjct: 220 PVLKAFVECAQLVESKVDQAVKSLIKLKESVSENGDPGERVGFYFVQGLCRRVAVGELDDLKNFH------QTTSEEFTLSYKALNDACPYSKFAHLTANQAILEATEKASKIHIVDFGIVQGIQWAALLQALATRSAGKPVRIRISGIPAPVLGKNPAASLLATGNRLLDFAKLLDLNFEFEPILTPIQELNESCFRVEPDEVLAVNFMLQLYNLLGETPG-----AVETALKMAKSLNPRIVTLGEYEVSL-NRVGYLTRFKNALRYYTAVFESLDPNMSRDSQERLQVERLLLGRRISGVLGPD--GIRRERMENKEQWRVLMESSGFESVSLSHYAMSQAKILLWNYNYSTLYSLDDSQPAFLTLAWNEVPLLTVSSWR 588
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: SCL4_ARATH (Scarecrow-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SCL4 PE=1 SV=1) HSP 1 Score: 433.335 bits (1113), Expect = 1.307e-145 Identity = 238/382 (62.30%), Postives = 289/382 (75.65%), Query Frame = 1 Query: 370 PLLKSLIDCAALIQTSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515 PLLK++ DCA + + P+ A +L + +SVS+ G+ T+RVAFYF EAL+ +L + + S+ +E+L L YK LNDACPYSKFAHLTANQAILE TE S IHIVDFGIVQGIQW ALLQA ATR+SGKP + +SGIPA +LG SP SL A+G RL +FAK+L LNF+F PIL+PIH LN SF V P+E LAVNFMLQLY LLD+ T V TAL LAKSL P++VTLGEYE S+ R GF NR K AL+++SAVFESL+PNL D ER++VE L GRRI+ +G E G RERME+KEQWRVLME+AGFESV LS+YA+SQAKILLWNY+YS+LYS+VES+PGF+SLAW D+PLLT+SSWR Sbjct: 216 PLLKAIYDCARISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSPA-------TSSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDE-----TPTIVDTALRLAKSLNPRVVTLGEYEVSL-NRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHRERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSWR 584
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: SCL7_ARATH (Scarecrow-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=SCL7 PE=1 SV=1) HSP 1 Score: 390.963 bits (1003), Expect = 1.059e-129 Identity = 227/387 (58.66%), Postives = 276/387 (71.32%), Query Frame = 1 Query: 367 HPLLKSLIDCAALIQTSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAE----VPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515 P+ K++ D A +T PD +L + +SVS+ G+ QRV +YF EAL+ K E E + + S+ E+ L YK LNDACPYSKFAHLTANQAILE T S +IHIVDFGI QGIQW+ALLQA ATRSSGKP + ISGIPA +LG SP SL A+G RL +FA +L LNFEF P+L+PI LN SF V P+E L VNFML+LY LLD+ +T V TAL LA+SL P+IVTLGEYE S+ R F NR K +L+++SAVFESL+PNL D ERL+VE +L GRRI V ++ PG+ ME+KEQWRVLME AGFE V S+YA+SQAK+LLWNY+YS+LYSLVESEPGF+SLAW +VPLLTVSSWR Sbjct: 175 QPIFKAIHDYARKPETKPD----TLIRIKESVSESGDPIQRVGYYFAEALSHK---ETE------SPSSSSSSSLEDFILSYKTLNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDE-----TATTVGTALRLARSLNPRIVTLGEYEVSL-NRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: SCL7_ORYSJ (SCARECROW-LIKE protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=SCL7 PE=1 SV=1) HSP 1 Score: 379.407 bits (973), Expect = 1.109e-124 Identity = 209/387 (54.01%), Postives = 260/387 (67.18%), Query Frame = 1 Query: 370 PLLKSLIDCAALIQTSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPIST-----ISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515 P+L+SL+ C+ T P A L + + + G+ ++R+AFYF +AL+R+L TG P + S+ELTLCYK LNDACPYSKFAHLTANQAILE T +T IHIVDFGIVQGIQWAALLQA ATR GKP + I+G+P+ LG PA SL+A+ RL +FAKLLG++FEF P+L P+HELN+ F V+P+EA+AVNFMLQLY+LL D + V L LAKSL P +VTLGEYE S+ R GF++RF AL Y+ ++FESLD + D PER++VE + G RI AVG E ERM +W+ LME GFE V LS+YA SQA +LLWNY YSLVE P FLSLAW+ PLLTVS+WR Sbjct: 206 PILQSLLSCSRAAATDPGLAAAELASVRAAATDAGDPSERLAFYFADALSRRLACG--------TGAPPSAEPDARFASDELTLCYKTLNDACPYSKFAHLTANQAILEATGAATKIHIVDFGIVQGIQWAALLQALATRPEGKPTRIRITGVPSPLLGPQPAASLAATNTRLRDFAKLLGVDFEFVPLLRPVHELNKSDFLVEPDEAVAVNFMLQLYHLLGDSD-----ELVRRVLRLAKSLSPAVVTLGEYEVSL-NRAGFVDRFANALSYYRSLFESLDVAMTRDSPERVRVERWMFGERIQRAVGPEEGADRTERMAGSSEWQTLMEWCGFEPVPLSNYARSQADLLLWNYDSKYKYSLVELPPAFLSLAWEKRPLLTVSAWR 578
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana OX=3702 GN=RGL2 PE=1 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 5.319e-53 Identity = 136/388 (35.05%), Postives = 214/388 (55.15%), Query Frame = 1 Query: 373 LLKSLIDCA-ALIQTSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGI-PAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILS-PIHELNEKSFCVKP-NEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDG--FLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVR-ERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515 L+ +L+ CA A+ Q + + A + + +VA YF +AL R++ + + + V P + E L + + ++CPY KFAH TANQAILE + +H++D G+ QG+QW AL+QA A R G P S ++GI P T ++SL G +L++FA+ +G+ FEF+ + + + +L + F +P +E L VN + +L+ LL A S ++ LN K++KP IVT+ E EA+ +G FL+RF AL Y+S++F+SL+ + +R+ E + LGR+I V AE GS R ER E QWR+ M+SAGF+ + L A QA + L + + VE G L + W+ PL+T S+W+ Sbjct: 180 LVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAETDVCAAVNP--SFEEVLEMHFY---ESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPP-SFRLTGIGPPQ---TENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLL------ARSGSIEKLLNTVKAIKPSIVTVVEQEAN---HNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSE-VYLGRQILNVVAAE--GSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASM-LLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR2 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.570e-51 Identity = 140/380 (36.84%), Postives = 191/380 (50.26%), Query Frame = 1 Query: 385 LIDCAALIQTSPDRALHSLT-HLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTA--LNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVR-ERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSW 1512 LI CA ++ A+ + L K VS G +R+ Y VE L +L + P S+ +L L +ACPY KF +++AN AI E +G IHI+DF I QG QW +LLQA A R G P +V I+GI + L G+RLS A L + FEF P+ ++ V P EALAVNF L+L+++ D ++ STA H L + KSL PK++TL E E++ T F RF L Y++A+FES+D LP D ER+ +E L R I + E G R ER E +W+ + AGF LS ++ A I SYS Y L E + G L L WK PL+ S+W Sbjct: 178 LIACARAVEEKNSFAIDMMIPELRKIVSVSGEPLERLGAYMVEGLVARLASSGISIYKALKCKEPKSS---DLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPP-TVRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFHPLAISGSKVEAAHLGVIPGEALAVNFTLELHHIPD----ESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAP-FPQRFAETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACE--GEERAERYEPFGKWKARLTMAGFRPSPLS--SLVNATIRTLLQSYSDNYKLAERD-GALYLGWKSRPLVVSSAW 543
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 6.511e-48 Identity = 130/385 (33.77%), Postives = 181/385 (47.01%), Query Frame = 1 Query: 373 LLKSLIDCAALIQTSPDRALHSLTH-LTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGV-APISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTA--LNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515 L L+ CA + + HS+ L + VS G QR+ Y +E L +L + P ST EL L + CPY KF +++AN AI E + +HI+DF I QG QW L+QAFA R G P + I+GI M + LS G RL++ AK + FEF + + E+ K+ V+P EALAVNF L+++ D ++ ST H L + KSL PK+VTL E E++ T F RF + Y++A+FES+D LP D +R+ VE L R + + E V ER E +WR AGF LS S K S +E G L L W L+ +W+ Sbjct: 119 LRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPAST---ELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPR-IRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPD----ESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNT-AAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRV-ERHELLGKWRSRFGMAGFTPYPLSPLVNSTIK---SLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum OX=4081 GN=GAI PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.687e-46 Identity = 138/418 (33.01%), Postives = 206/418 (49.28%), Query Frame = 1 Query: 334 PLTPVTPHSAPHPLLKSLIDCAALIQ----TSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKA-LNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGI-PAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRP-ILSPIHELNEKSFCVKPN--EALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFE--------------SLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVR-ERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515 P+ V L+ +L+ CA +Q T D+ + + L +VSQ G ++VA YF EAL R+ I + P ++ T + + CPY KFAH TANQAILE G +H++DF + QG+QW AL+QA A R G P + ++GI P T ++L G +L++ A+ +G+ FEFR + + + +L+ ++P+ EA+A+N + +L+ LL + A+ LN K + PKIVTL E EA+ F++RF AL Y+S +F+ + P P + + L + + LGR+I V E GS R ER E QWRV M S+GF+ V L A QA + L VE G L L W PL+ S+W+ Sbjct: 186 PVVLVDSQETGVRLVHTLMACAEAVQQENLTLADQLVRHIGIL--AVSQSG-AMRKVATYFAEALARR-----------IYKIYPQDSMESSYTDVLQMHFYETCPYLKFAHFTANQAILEAFTGCNKVHVIDFSLKQGMQWPALMQALALRPGGPP-AFRLTGIGPPQPDNT---DALQQVGWKLAQLAETIGVEFEFRGFVANSLADLDATILDIRPSETEAVAINSVFELHRLL------SRPGAIEKVLNSIKQINPKIVTLVEQEAN-HNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVN-NQDLVMSEVYLGRQICNVVACE--GSDRVERHETLNQWRVRMNSSGFDPVHLGSNAFKQASM-LLALFAGGDGYRVEENDGCLMLGWHTRPLIATSAWK 574
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera OX=29760 GN=GAI1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.824e-46 Identity = 131/389 (33.68%), Postives = 203/389 (52.19%), Query Frame = 1 Query: 373 LLKSLIDCAALIQTSPDRALHSLTHLTK--SVSQHGNHTQRVAFYFVEALTRKL-ELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRP-ILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDG--FLNRFKAALKYFSAVFESLDPN--LPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSWR 1515 L+ +L+ CA +Q + +L +VSQ G ++VA YF E L R++ L +K + S+ S+ L + + + CPY KFAH TANQAILE EG +H++DF + QG+QW AL+QA A R G P S ++GI + T + L G +L++ A+ + + FE+R + + + +L+ ++ E++AVN + +L++LL A + L+ K +KP IVT+ E EA+ +G FL+RF +L Y+S +F+SL+ P + ++L E + LG++I V E P V ER E QWR + SAGF+ V L A QA + L VE G L L W PL+ S+W+ Sbjct: 214 LVHTLMACAEAVQQENLKLAEALVKQIGFLAVSQAGA-MRKVATYFAEGLARRIYRLYPDKPLD--------SSFSDILQMHFY---ETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMKQGMQWPALMQALALRPGGPP-SFRLTGIGPPS--TDNTDHLHEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRDGESVAVNSVFELHSLL------ARPGGIERVLSAVKDMKPDIVTIVEQEAN---HNGPVFLDRFTESLHYYSTLFDSLEGCGVSPVNTQDKLMSE-VYLGQQICNVVACEGPERV-ERHETLAQWRARLGSAGFDPVNLGSNAFKQASM-LLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQ 575
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR1 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.115e-46 Identity = 123/398 (30.90%), Postives = 183/398 (45.98%), Query Frame = 1 Query: 325 FKPPLTPVTPHSAPHPLLKSLID-CAALIQTSPDRALHSLTHLTKSV-SQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKIXXXXXXXXXXXXXVESEPGFLSLAWKDVPLLTVSSW 1512 F+P P ++K L+ CA + H L + V S +G QR+ Y +E L + N + S+EL + L + CPY KF ++ AN AI E +IHI+DF I QG QW L+QA A R G P V I+GI + L GK L ++ + EF P+ ++ ++ ++P EAL+VNF LQL++ DE + L + K L PK+ TL E E+ T FL RF ++Y+SA+FES+D NLP D ER+ VE L + I + E V ER E +W+ + AGF LS Y S ++ + S ++ + G + L W+ L++ S+W Sbjct: 184 FRPEKRQRELREDPQIIVKQLLTRCAEALSEDRTEEFHKLVQEARGVVSINGEPIQRLGAYLLEGLVAR---HGNSGTNIYRALKCREPESKELLSYMRILYNICPYFKFGYMAANGAIAEALRTENNIHIIDFQIAQGTQWITLIQALAARPGGPPR-VRITGIDDPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFTPLSVYATQVTKEMLEIRPGEALSVNFTLQLHHT--PDESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNT-TPFLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRV-ERHELLGKWKSRLTMAGFRPYPLSSYVNS---VIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAW 570 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23366 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23366_La_Tanjil_v1.0 ID=rna-TanjilR_23366_La_Tanjil_v1.0; Name=rna-TanjilR_23366; organism=Lupinus angustifolius; type=mRNA; length=1518bpback to top protein sequence of rna-TanjilR_23366_La_Tanjil_v1.0 >rna-TanjilR_23366_La_Tanjil_v1.0 ID=rna-TanjilR_23366_La_Tanjil_v1.0; Name=rna-TanjilR_23366_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=505bpback to top mRNA from alignment at Chr_LG08-CM007368.1:25202122..25203639- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23366_La_Tanjil_v1.0 ID=rna-TanjilR_23366_La_Tanjil_v1.0; Name=rna-TanjilR_23366; organism=Lupinus angustifolius; type=mRNA; length=1518bp; location=Sequence derived from: Chr_LG08-CM007368.1:25202122..25203639- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:25202122..25203639- >rna-TanjilR_23366_La_Tanjil_v1.0 ID=rna-TanjilR_23366_La_Tanjil_v1.0; Name=rna-TanjilR_23366; organism=Lupinus angustifolius; type=CDS; length=1518bp; location=Sequence derived from: Chr_LG08-CM007368.1:25202122..25203639- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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