rna-TanjilR_13876

Transcript Overview


Name	rna-TanjilR_13876
Unique Name	rna-TanjilR_13876_La_Tanjil_v1.0
Type	mRNA
Organism	Lupinus angustifolius (blue lupin)
Sequence length	1381
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_LG09-CM007369.1	supercontig	Chr_LG09-CM007369.1:18032944..18034324 -	Lupinus angustifolius L. Tanjil genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Lupinus angustifolius L. Tanjil genome v1.0	2019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.0	2020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot	2020-01-28

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ananL183	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananL284	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananL310	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananL467	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ancaiR1406	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
anccR1504	Cajanus cajan Asha genome v1.0	Cajanus cajan
ancaR1205	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ancaR1212	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ancrR1412	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ancrR1421	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
anpsR1019	Pisum sativum Cameor genome v1a	Pisum sativum
anpsR1028	Pisum sativum Cameor genome v1a	Pisum sativum
anpvR1404	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anpvR1419	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anvuR1204	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anvuR1209	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anasR1330	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anasR1359	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anzwsR1164	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
anzwsR1178	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
antifR1202	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvfhR1231	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
antifR1217	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvrvR1153	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvrvR1162	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvuaR1158	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvuaR1163	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvssR1322	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
anvssR1336	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ancanR1095	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
ancanR1102	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
anavjR1300	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjR1323	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjR1328	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
ancarR1156		Cicer arietinum
ancarR1164		Cicer arietinum
anccaR1149	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anccaR1162	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anvumR1323	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvumR1327	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvumR1331	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvvaR1236	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvvaR1249	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvasR1323	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvstR1317	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvasR1327	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvstR1321	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvstR1325	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvasR1331	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvunR1165	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
anvunR1172	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
anpvfR1448	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
anpvfR1463	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-TanjilG_13876	gene-TanjilG_13876_La_Tanjil_v1.0	Lupinus angustifolius	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_13876	rna-TanjilR_13876_La_Tanjil_v1.0-protein	Lupinus angustifolius	polypeptide
rna-TanjilR_13876_La_Tanjil_v1.0	rna-TanjilR_13876_La_Tanjil_v1.0	Lupinus angustifolius	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_13876_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18034050..18034324	rna-TanjilR_13876_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18034050..18034324	Lupinus angustifolius	CDS
rna-TanjilR_13876_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18033705..18033840	rna-TanjilR_13876_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18033705..18033840	Lupinus angustifolius	CDS
rna-TanjilR_13876_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18032944..18033414	rna-TanjilR_13876_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18032944..18033414	Lupinus angustifolius	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_13876_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18034050..18034324	rna-TanjilR_13876_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18034050..18034324	Lupinus angustifolius	exon
rna-TanjilR_13876_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18033705..18033840	rna-TanjilR_13876_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18033705..18033840	Lupinus angustifolius	exon
rna-TanjilR_13876_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18032944..18033414	rna-TanjilR_13876_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18032944..18033414	Lupinus angustifolius	exon

Homology

[Close]

BLAST of rna-TanjilR_13876 vs. DB:Swiss
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 7.919e-54
Identity = 93/156 (59.62%), Postives = 118/156 (75.64%), Query Frame = 2

Query:  911 VPIPSHQINTIDDALPADGVADVYETSLRRLVERKVITTSSETGFPKFDLMLLDMGPDGNVADLYPGYPEVNETRKWVTFLKNAPKPPPERITFTLPVINSASNIAMVVTGAGKADAVYSALV-KGPSNGKLPIHL-VSPEGEIKWFLDKGAASRL 1372
            VPIP+ Q+  I+DAL A+G AD YET L++LV+  VI  S  TGFP+FD+MLL MGPDG++A L+PG+P VNE +KWVT++K++PKPPPERITFT PVINS++ +AMVVTGAGKA AV  AL  K  S+  LP+ + V  +GE  WF DK A S L
Sbjct:  166 VPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321

HSP 2 Score: 75.485 bits (184), Expect = 1.204e-13
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 3

Query:  465 CLCYNLRKLVDSPYYDQIEWSKWHIFWADEKVVPITHVDSNYKHAYDGF 611
             L  N+RKL + PY D ++WSKWH+FW DE+VVP  H DSNYK A DGF
Sbjct:  114 SLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGF 162

[Close]

BLAST of rna-TanjilR_13876 vs. DB:Swiss
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 8.088e-54
Identity = 93/156 (59.62%), Postives = 118/156 (75.64%), Query Frame = 2

Query:  911 VPIPSHQINTIDDALPADGVADVYETSLRRLVERKVITTSSETGFPKFDLMLLDMGPDGNVADLYPGYPEVNETRKWVTFLKNAPKPPPERITFTLPVINSASNIAMVVTGAGKADAVYSALV-KGPSNGKLPIHL-VSPEGEIKWFLDKGAASRL 1372
            VPIP+ Q+  I+DAL A+G AD YET L++LV+  VI  S  TGFP+FD+MLL MGPDG++A L+PG+P VNE +KWVT++K++PKPPPERITFT PVINS++ +AMVVTGAGKA AV  AL  K  S+  LP+ + V  +GE  WF DK A S L
Sbjct:  166 VPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321

HSP 2 Score: 75.0998 bits (183), Expect = 1.395e-13
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 3

Query:  465 CLCYNLRKLVDSPYYDQIEWSKWHIFWADEKVVPITHVDSNYKHAYDGF 611
             L  N+RKL + PY D ++WSKWH+FW DE+VVP  H DSNYK A DGF
Sbjct:  114 SLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGF 162

[Close]

BLAST of rna-TanjilR_13876 vs. DB:Swiss
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.626e-52
Identity = 91/156 (58.33%), Postives = 116/156 (74.36%), Query Frame = 2

Query:  911 VPIPSHQINTIDDALPADGVADVYETSLRRLVERKVITTSSETGFPKFDLMLLDMGPDGNVADLYPGYPEVNETRKWVTFLKNAPKPPPERITFTLPVINSASNIAMVVTGAGKADAVYSALV-KGPSNGKLPIHLVS-PEGEIKWFLDKGAASRL 1372
            VPIP+ QI  I+D L A+G AD YET L++LV   V+  S  TGFPK DLMLL MGPDG+VA L+PG+P VNE  KWV+++K++PKPPPERITFT P++NS+++IA+VVTGAGKA AV+ A   K  S+  LP+ +VS  EG + WF DK A S L
Sbjct:  169 VPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324

HSP 2 Score: 73.9442 bits (180), Expect = 3.844e-13
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 3

Query:  465 CLCYNLRKLVDSPYYDQIEWSKWHIFWADEKVVPITHVDSNYKHAYDGF 611
             L   LRKL +SPY + +EWSKWH+FW DE+VVP  H DSNYK A DG 
Sbjct:  117 SLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGL 165

[Close]

BLAST of rna-TanjilR_13876 vs. DB:Swiss
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.626e-52
Identity = 91/156 (58.33%), Postives = 116/156 (74.36%), Query Frame = 2

Query:  911 VPIPSHQINTIDDALPADGVADVYETSLRRLVERKVITTSSETGFPKFDLMLLDMGPDGNVADLYPGYPEVNETRKWVTFLKNAPKPPPERITFTLPVINSASNIAMVVTGAGKADAVYSALV-KGPSNGKLPIHLVS-PEGEIKWFLDKGAASRL 1372
            VPIP+ QI  I+D L A+G AD YET L++LV   V+  S  TGFPK DLMLL MGPDG+VA L+PG+P VNE  KWV+++K++PKPPPERITFT P++NS+++IA+VVTGAGKA AV+ A   K  S+  LP+ +VS  EG + WF DK A S L
Sbjct:  169 VPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324

HSP 2 Score: 73.9442 bits (180), Expect = 3.844e-13
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 3

Query:  465 CLCYNLRKLVDSPYYDQIEWSKWHIFWADEKVVPITHVDSNYKHAYDGF 611
             L   LRKL +SPY + +EWSKWH+FW DE+VVP  H DSNYK A DG 
Sbjct:  117 SLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGL 165

[Close]

BLAST of rna-TanjilR_13876 vs. DB:Swiss
Match: 6PGL3_ARATH (6-phosphogluconolactonase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGL3 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.526e-46
Identity = 84/155 (54.19%), Postives = 111/155 (71.61%), Query Frame = 2

Query:  911 VPIPSHQINTIDDALPADGVADVYETSLRRLVERKVITTSSETGFPKFDLMLLDMGPDGNVADLYPGYPEVNETRKWVTFLKNAPKPPPERITFTLPVINSASNIAMVVTGAGKADAVYSALVKGPSNGKL-PIHLVSPEGEIKWFLDKGAASRL 1372
            VPIP   +  I++AL A+  AD YET L+ LV   ++  S  TGFPKFDLMLL MGPDG+VA L+PG+   NE++KWV  + ++PKPP ERITFT PVINS++++A+VV G+GKA+AV +AL K    G + P   VS E E+ WFLDK A+S+L
Sbjct:  174 VPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGKAEAVEAALKK---TGNVPPAGSVSAEDELVWFLDKPASSKL 325

HSP 2 Score: 73.1738 bits (178), Expect = 5.981e-13
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 3

Query:  465 CLCYNLRKLVDSPYYDQIEWSKWHIFWADEKVVPITHVDSNYKHAYDGF 611
             L  +LRKLV+SPY D I+W++WH FW DE+VVP  H DSNYK AYD F
Sbjct:  122 SLIKSLRKLVESPYVDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSF 170

[Close]

BLAST of rna-TanjilR_13876 vs. DB:Swiss
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5 OS=Arabidopsis thaliana OX=3702 GN=PGL5 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.472e-39
Identity = 75/158 (47.47%), Postives = 102/158 (64.56%), Query Frame = 2

Query:  911 VPIPSHQINTIDDALPADG----VADVYETSLRRLVERKVITTSSETGFPKFDLMLLDMGPDGNVADLYPGYPEVNETRKWVTFLKNAPKPPPERITFTLPVINSASNIAMVVTGAGKADAVYSALVKGPSNGKLPIHLVSPEGEIKWFLDKGAASRL 1372
            VPIP   I  ID  L ADG     A +YE  L+ LV+ K+I  S +TG+P+FDL LL MGPDG++A L+P +P++NE +KWVT++ ++PKPPP+RITFTLPVINS     M +     A +V  A +   +N  LP   +S + E  W+LD+ AAS L
Sbjct:   97 VPIPDKNIYAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMASLFPNHPQINEKQKWVTYITDSPKPPPKRITFTLPVINSTLYNLMAICDKAPAKSV--AEIMKHNNLSLPSAHLSAQVENVWYLDQAAASEL 252

HSP 2 Score: 57.7658 bits (138), Expect = 3.791e-8
Identity = 35/85 (41.18%), Postives = 41/85 (48.24%), Query Frame = 3

Query:  375 FPIFNATCYKVSICEALYSLLFGKVKQLLICLCYN------LRKLVDSPYYDQIEWSKWHIFWADEKVVPITHVDSNYKHAYDGF 611
            FP  N     ++   A  S  F K K L   +         L KLV  PY D IEW KWH+FW DE+V      DSNYK A +GF
Sbjct:    9 FPTKNELSEAMAEYTANLSAKFIKEKGLFTVVLSGGDLIDWLCKLVQPPYIDSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGF 93

[Close]

BLAST of rna-TanjilR_13876 vs. DB:Swiss
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana OX=3702 GN=PGL2 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.058e-37
Identity = 72/158 (45.57%), Postives = 103/158 (65.19%), Query Frame = 2

Query:  911 VPIPSHQINTIDDALPADGVADV----YETSLRRLVERKVITTSSETGFPKFDLMLLDMGPDGNVADLYPGYPEVNETRKWVTFLKNAPKPPPERITFTLPVINSASNIAMVVTGAGKADAVYSALVKGPSNGKLPIHLVSPEGEIKWFLDKGAASRL 1372
            VP+P+  I  ID+ L A+G A++    YE  L++ V + +I T   +GFP+FDL LL MGPDG++A L+PG+ ++NE  KWVT + ++PKPP +RIT TLPVIN AS   M V    +AD+V +AL        LP   ++ + E+ WFLD+ AAS+L
Sbjct:   97 VPVPAENIYAIDNGLGAEGNAELAAERYEECLKQKVNQNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHAQINEKVKWVTSITDSPKPPSKRITLTLPVINCASYNVMAVCDKEQADSVAAAL---NHTKDLPAGRLTADVEVVWFLDQAAASKL 251

HSP 2 Score: 67.0106 bits (162), Expect = 3.191e-11
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 3

Query:  486 KLVDSPYYDQIEWSKWHIFWADEKVVPITHVDSNYKHAYDGF 611
            KL+++PY D IEWSKWHIFW DE+V    H DSNYK AYDGF
Sbjct:   52 KLLEAPYIDSIEWSKWHIFWVDERVCAWDHADSNYKLAYDGF 93

[Close]

BLAST of rna-TanjilR_13876 vs. DB:Swiss
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.351e-37
Identity = 75/159 (47.17%), Postives = 104/159 (65.41%), Query Frame = 2

Query:  911 VPIPSHQINTIDDALPADGVADVYETSLRRLVERKVITTSSETGFPKFDLMLLDMGPDGNVADLYPGYPEVNETRKWVTFLKNAPKPPPERITFTLPVINSASNIAMVVTGAGKADAVYSAL---VKGPSN-GKLPIHLVSP-EGEIKWFLDKGAASRL 1372
            VPI +  + +I+D    +  A  YE  +R+LV+ + I  S     PKFDL+LL MG DG+VA L+P +P +     W+T++ ++P+PPPERITFTLPVINSASNIA+V TG  K++AV+ A+     GP     LP  +V P +G++ WFLDK AAS L
Sbjct:  108 VPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSL 266

[Close]

BLAST of rna-TanjilR_13876 vs. DB:Swiss
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.351e-37
Identity = 75/159 (47.17%), Postives = 104/159 (65.41%), Query Frame = 2

Query:  911 VPIPSHQINTIDDALPADGVADVYETSLRRLVERKVITTSSETGFPKFDLMLLDMGPDGNVADLYPGYPEVNETRKWVTFLKNAPKPPPERITFTLPVINSASNIAMVVTGAGKADAVYSAL---VKGPSN-GKLPIHLVSP-EGEIKWFLDKGAASRL 1372
            VPI +  + +I+D    +  A  YE  +R+LV+ + I  S     PKFDL+LL MG DG+VA L+P +P +     W+T++ ++P+PPPERITFTLPVINSASNIA+V TG  K++AV+ A+     GP     LP  +V P +G++ WFLDK AAS L
Sbjct:  108 VPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSL 266

[Close]

BLAST of rna-TanjilR_13876 vs. DB:Swiss
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.578e-37
Identity = 74/158 (46.84%), Postives = 104/158 (65.82%), Query Frame = 2

Query:  911 VPIPSHQINTIDDALPADGVADVYETSLRRLVERKVITTSSETGFPKFDLMLLDMGPDGNVADLYPGYPEVNETRKWVTFLKNAPKPPPERITFTLPVINSASNIAMVVTGAGKADAVYSAL---VKGPSNGKLPIHLVSP-EGEIKWFLDKGAASRL 1372
            VPI +  + +I+D +  +  A  YE  +R+LV+ + +  S     PKFDL+LL +G DG+VA L+P +P +     WVT++ ++P PPPERITFTLPVINSASNIA+V TG  KA AVY A+    +GP    +P  +V P +G++ WFLDK +AS L
Sbjct:  125 VPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGAEGPDAPSIPARMVQPTDGKLVWFLDKASASFL 282

HSP 2 Score: 54.6842 bits (130), Expect = 6.564e-7
Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 3

Query:  480 LRKLVDSPYYDQIEWSKWHIFWADEKVVPITHVDSNYKHAYDGF 611
            +RKL ++PY   ++WSKW+IFWADE+ V   HVDS YK   + F
Sbjct:   78 MRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDF 121

The following BLAST results are available for this feature:

BLAST of rna-TanjilR_13876 vs. DB:Swiss

BLAST of rna-TanjilR_13876 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10

Position :

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x 1


Match Name	E-value	Identity	Description
6PGL4_ORYSJ	7.919e-54	59.62	Probable 6-phosphogluconolactonase 4, chloroplasti...	[more]
6PGL4_ORYSI	8.088e-54	59.62	Probable 6-phosphogluconolactonase 4, chloroplasti...	[more]
6PGL3_ORYSJ	3.626e-52	58.33	Probable 6-phosphogluconolactonase 3, chloroplasti...	[more]
6PGL3_ORYSI	3.626e-52	58.33	Probable 6-phosphogluconolactonase 3, chloroplasti...	[more]
6PGL3_ARATH	1.526e-46	54.19	6-phosphogluconolactonase 3, chloroplastic OS=Arab...	[more]
6PGL5_ARATH	3.472e-39	47.47	Probable 6-phosphogluconolactonase 5 OS=Arabidopsi...	[more]
6PGL2_ARATH	1.058e-37	45.57	Probable 6-phosphogluconolactonase 2 OS=Arabidopsi...	[more]
6PGL2_ORYSJ	1.351e-37	47.17	Probable 6-phosphogluconolactonase 2 OS=Oryza sati...	[more]
6PGL2_ORYSI	1.351e-37	47.17	Probable 6-phosphogluconolactonase 2 OS=Oryza sati...	[more]
6PGL1_ORYSI	1.578e-37	46.84	Probable 6-phosphogluconolactonase 1 OS=Oryza sati...	[more]

InterPro

Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006148	Glucosamine/galactosamine-6-phosphate isomerase	PFAM	PF01182	Glucosamine_iso	coord: 54..281 e-value: 5.8E-57 score: 193.2
IPR005900	6-phosphogluconolactonase, DevB-type	TIGRFAM	TIGR01198	TIGR01198	coord: 53..290 e-value: 2.5E-54 score: 182.3
IPR005900	6-phosphogluconolactonase, DevB-type	CDD	cd01400	6PGL	coord: 55..283 e-value: 1.83997E-78 score: 235.534
None	No IPR available	GENE3D	3.40.50.1360		coord: 42..291 e-value: 3.1E-69 score: 235.2
IPR037171	NagB/RpiA transferase-like	SUPERFAMILY	100950	NagB/RpiA/CoA transferase-like	coord: 53..291

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_LG09-CM007369.1:18032944..18034324-
coding sequence from alignment at Chr_LG09-CM007369.1:18032944..18034324-

mRNA sequence

>rna-TanjilR_13876_La_Tanjil_v1.0 ID=rna-TanjilR_13876_La_Tanjil_v1.0; Name=rna-TanjilR_13876; organism=Lupinus angustifolius; type=mRNA; length=1381bp
ATGCCATTTTTGTCATCCAAAGTTGGACAAAAACACCTTTACCATCCCCT
AAGACACAATGGGATTTCTCCAATTCCCATGAACCCTAGGAGAACTCATG
TTGGTGGCTCAGTGTCAGTTAAGGCATCATTGAACAACAATGATGTTGAG
GTGTTCTCTAAGGAGCATCTTGCTGTGTCTTTGGCCAAATATGTTTCTGG
TATCTCTAATAAGTTCATCAGAGAAAAAGGATGCTTCACTGTTGTTTTGT
CTGGTGGGTCTGTCAAGTACCTCAAGTGAGTATACACTAAACAACATGAG
TGTTTCACTGTTCCATTTTTTTTCGTATCAACTTTGCACAGGAATTGAGT
TAAAAATTTAAAGCAGATAAAACTTTTCCCATTTTTAATGCCACATGTTA
TAAGGTCAGTATATGTGAGGCATTGTATAGTTTGTTATTTGGGAAAGTTA
AGCAATTATTAATTTGTCTATGTTACAATCTCAGGAAGCTTGTGGACTCT
CCATATTATGACCAAATTGAGTGGTCTAAGTGGCATATATTTTGGGCTGA
TGAGAAAGTGGTGCCAATTACTCATGTAGATAGCAACTACAAGCATGCTT
ATGATGGATTTATCTCCAAGGTAAAAATACTAATCTCCATCTCAATTTCC
CTTTATTTATCTCATAGCCTCTAATCCATGCTCCATTGAACAAGCAAGTA
GAATGGTGAATAGTTTTTACCTTCTTAGTTGAGACTTACATATTACTTTA
CAATTTTATACATTTCTTCGCATATTCATATTAATAAAAAGATATTAATG
ATGACTAGAAGTCTAGAGCAACACCAACATATATAATTTCAACACTATGT
TTAACACATTCATTATGTAAAATTCATGTGGCCCTATTAATTTATGGTTC
TGTATGGTAGGTGCCAATTCCTTCTCACCAAATAAACACCATTGATGATG
CCTTACCAGCTGATGGAGTAGCTGATGTTTATGAAACAAGTCTGAGACGC
TTGGTTGAAAGGAAAGTGATAACTACATCATCAGAAACTGGTTTTCCAAA
ATTTGATCTCATGCTACTTGACATGGGTCCTGATGGCAATGTTGCTGATC
TCTACCCAGGGTACCCAGAAGTGAATGAGACTAGAAAATGGGTCACCTTC
CTCAAGAATGCACCCAAACCACCACCAGAAAGGATTACATTTACCTTGCC
AGTGATTAATTCTGCTTCAAACATAGCAATGGTTGTTACTGGTGCTGGTA
AAGCTGATGCAGTGTATTCTGCACTGGTGAAAGGTCCTAGTAATGGTAAA
CTTCCTATTCATTTGGTTTCACCAGAAGGAGAGATTAAATGGTTCTTGGA
CAAGGGTGCAGCTTCAAGGTTGTACAGGTAG

protein sequence of rna-TanjilR_13876_La_Tanjil_v1.0

>rna-TanjilR_13876_La_Tanjil_v1.0 ID=rna-TanjilR_13876_La_Tanjil_v1.0; Name=rna-TanjilR_13876_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=293bp
MPFLSSKVGQKHLYHPLRHNGISPIPMNPRRTHVGGSVSVKASLNNNDVE
VFSKEHLAVSLAKYVSGISNKFIREKGCFTVVLSGGSVKYLKKLVDSPYY
DQIEWSKWHIFWADEKVVPITHVDSNYKHAYDGFISKVPIPSHQINTIDD
ALPADGVADVYETSLRRLVERKVITTSSETGFPKFDLMLLDMGPDGNVAD
LYPGYPEVNETRKWVTFLKNAPKPPPERITFTLPVINSASNIAMVVTGAG
KADAVYSALVKGPSNGKLPIHLVSPEGEIKWFLDKGAASRLYR

mRNA from alignment at Chr_LG09-CM007369.1:18032944..18034324-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-TanjilR_13876_La_Tanjil_v1.0 ID=rna-TanjilR_13876_La_Tanjil_v1.0; Name=rna-TanjilR_13876; organism=Lupinus angustifolius; type=mRNA; length=1381bp; location=Sequence derived from: Chr_LG09-CM007369.1:18032944..18034324- (Lupinus angustifolius
ATGCCATTTTTGTCATCCAAAGTTGGACAAAAACACCTTTACCATCCCCT
AAGACACAATGGGATTTCTCCAATTCCCATGAACCCTAGGAGAACTCATG
TTGGTGGCTCAGTGTCAGTTAAGGCATCATTGAACAACAATGATGTTGAG
GTGTTCTCTAAGGAGCATCTTGCTGTGTCTTTGGCCAAATATGTTTCTGG
TATCTCTAATAAGTTCATCAGAGAAAAAGGATGCTTCACTGTTGTTTTGT
CTGGTGGGTCTGTCAAGTACCTCAAGTGAGTATACACTAAACAACATGAG
TGTTTCACTGTTCCATTTTTTTTCGTATCAACTTTGCACAGGAATTGAGT
TAAAAATTTAAAGCAGATAAAACTTTTCCCATTTTTAATGCCACATGTTA
TAAGGTCAGTATATGTGAGGCATTGTATAGTTTGTTATTTGGGAAAGTTA
AGCAATTATTAATTTGTCTATGTTACAATCTCAGGAAGCTTGTGGACTCT
CCATATTATGACCAAATTGAGTGGTCTAAGTGGCATATATTTTGGGCTGA
TGAGAAAGTGGTGCCAATTACTCATGTAGATAGCAACTACAAGCATGCTT
ATGATGGATTTATCTCCAAGGTAAAAATACTAATCTCCATCTCAATTTCC
CTTTATTTATCTCATAGCCTCTAATCCATGCTCCATTGAACAAGCAAGTA
GAATGGTGAATAGTTTTTACCTTCTTAGTTGAGACTTACATATTACTTTA
CAATTTTATACATTTCTTCGCATATTCATATTAATAAAAAGATATTAATG
ATGACTAGAAGTCTAGAGCAACACCAACATATATAATTTCAACACTATGT
TTAACACATTCATTATGTAAAATTCATGTGGCCCTATTAATTTATGGTTC
TGTATGGTAGGTGCCAATTCCTTCTCACCAAATAAACACCATTGATGATG
CCTTACCAGCTGATGGAGTAGCTGATGTTTATGAAACAAGTCTGAGACGC
TTGGTTGAAAGGAAAGTGATAACTACATCATCAGAAACTGGTTTTCCAAA
ATTTGATCTCATGCTACTTGACATGGGTCCTGATGGCAATGTTGCTGATC
TCTACCCAGGGTACCCAGAAGTGAATGAGACTAGAAAATGGGTCACCTTC
CTCAAGAATGCACCCAAACCACCACCAGAAAGGATTACATTTACCTTGCC
AGTGATTAATTCTGCTTCAAACATAGCAATGGTTGTTACTGGTGCTGGTA
AAGCTGATGCAGTGTATTCTGCACTGGTGAAAGGTCCTAGTAATGGTAAA
CTTCCTATTCATTTGGTTTCACCAGAAGGAGAGATTAAATGGTTCTTGGA
CAAGGGTGCAGCTTCAAGGTTGTACAGGTAG

Coding sequence (CDS) from alignment at Chr_LG09-CM007369.1:18032944..18034324-

>rna-TanjilR_13876_La_Tanjil_v1.0 ID=rna-TanjilR_13876_La_Tanjil_v1.0; Name=rna-TanjilR_13876; organism=Lupinus angustifolius; type=CDS; length=882bp; location=Sequence derived from: Chr_LG09-CM007369.1:18032944..18034324- (Lupinus angustifolius
ATGCCATTTTTGTCATCCAAAGTTGGACAAAAACACCTTTACCATCCCCT
AAGACACAATGGGATTTCTCCAATTCCCATGAACCCTAGGAGAACTCATG
TTGGTGGCTCAGTGTCAGTTAAGGCATCATTGAACAACAATGATGTTGAG
GTGTTCTCTAAGGAGCATCTTGCTGTGTCTTTGGCCAAATATGTTTCTGG
TATCTCTAATAAGTTCATCAGAGAAAAAGGATGCTTCACTGTTGTTTTGT
CTGGTGGGTCTGTCAAGTACCTCAAGAAGCTTGTGGACTCTCCATATTAT
GACCAAATTGAGTGGTCTAAGTGGCATATATTTTGGGCTGATGAGAAAGT
GGTGCCAATTACTCATGTAGATAGCAACTACAAGCATGCTTATGATGGAT
TTATCTCCAAGGTGCCAATTCCTTCTCACCAAATAAACACCATTGATGAT
GCCTTACCAGCTGATGGAGTAGCTGATGTTTATGAAACAAGTCTGAGACG
CTTGGTTGAAAGGAAAGTGATAACTACATCATCAGAAACTGGTTTTCCAA
AATTTGATCTCATGCTACTTGACATGGGTCCTGATGGCAATGTTGCTGAT
CTCTACCCAGGGTACCCAGAAGTGAATGAGACTAGAAAATGGGTCACCTT
CCTCAAGAATGCACCCAAACCACCACCAGAAAGGATTACATTTACCTTGC
CAGTGATTAATTCTGCTTCAAACATAGCAATGGTTGTTACTGGTGCTGGT
AAAGCTGATGCAGTGTATTCTGCACTGGTGAAAGGTCCTAGTAATGGTAA
ACTTCCTATTCATTTGGTTTCACCAGAAGGAGAGATTAAATGGTTCTTGG
ACAAGGGTGCAGCTTCAAGGTTGTACAGGTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006148	Glc/Gal-6P_isomerase
IPR005900	6-phosphogluconolactonase_DevB
IPR037171	NagB/RpiA_transferase-like

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process
GO:0006098	pentose-phosphate shunt

Vocabulary: **Molecular Function**
Term	Definition
GO:0017057	6-phosphogluconolactonase activity

Search form

rna-TanjilR_13876