rna-TanjilR_01652

Transcript Overview
Namerna-TanjilR_01652
Unique Namerna-TanjilR_01652_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1112
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG09-CM007369.1supercontigChr_LG09-CM007369.1:18350242..18351353 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL183Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL284Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL310Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL467Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1378Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1406Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR1176Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1212Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1389Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0994Pisum sativum Cameor genome v1aPisum sativum
anpsR1019Pisum sativum Cameor genome v1aPisum sativum
anpvR1404Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1204Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1209Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1330Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR1133Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1164Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvfhR1199Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1185Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1216Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1202Vicia faba cv. Tiffany genome v1.0Vicia faba
anvrvR1153Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1162Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1158Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR1163Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1322Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1360Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR1064Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR1102Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1300Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1323Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1131Cicer arietinum
ancarR1164Cicer arietinum
anccaR1149Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1162Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1323Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1327Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1236Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR1272Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR1323Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1317Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1327Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1321Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR1165Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1172Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1448Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
jg563.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat2g076240.1Pisum sativum Cameor genome v1aPisum sativum
XM_058890246.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Tiffany.R1.1g162520.1Vicia faba cv. Tiffany genome v1.0Vicia faba
evm.model.Chr08.1930Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun08g093100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun08g093100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat02G0240300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Hedin2.R1.1g208480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_022782213.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va07G056020.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.008G167000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cc_v2.0_11629.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_01652gene-TanjilG_01652_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_01652rna-TanjilR_01652_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_01652_La_Tanjil_v1.0rna-TanjilR_01652_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_01652_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350242..18350528rna-TanjilR_01652_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350242..18350528Lupinus angustifoliusexon
rna-TanjilR_01652_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350709..18350822rna-TanjilR_01652_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350709..18350822Lupinus angustifoliusexon
rna-TanjilR_01652_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350904..18351063rna-TanjilR_01652_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350904..18351063Lupinus angustifoliusexon
rna-TanjilR_01652_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18351192..18351353rna-TanjilR_01652_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18351192..18351353Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_01652_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350242..18350528rna-TanjilR_01652_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350242..18350528Lupinus angustifoliusCDS
rna-TanjilR_01652_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350709..18350822rna-TanjilR_01652_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350709..18350822Lupinus angustifoliusCDS
rna-TanjilR_01652_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350904..18351063rna-TanjilR_01652_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18350904..18351063Lupinus angustifoliusCDS
rna-TanjilR_01652_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18351192..18351353rna-TanjilR_01652_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:18351192..18351353Lupinus angustifoliusCDS


Homology
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BLAST of rna-TanjilR_01652 vs. DB:Swiss
Match: EAR1_ORYSI (Protein terminal ear1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=PLA2 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.580e-13
Identity = 40/122 (32.79%), Postives = 52/122 (42.62%), Query Frame = 1 
Query:  478 LLKILDEHCFELNKNAE-----NVAAYSKFDFLYLPMDFRLKF*EPFFPLIYSDLSNNHLFGSYYIRKHAIEKKLSNLGYAFVNFTSPSAAFKFYMRFNGFVWNVTTNRKTCEINAAQYQVL 828
            LL +LD HC   N+  E         +S +DFLYLP+DF                 NN                  N+GY FVN TSP AA + Y  F+   W V  +RK C++  A+ Q L
Sbjct:  471 LLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDF-----------------NNKC----------------NVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGL 559

HSP 2 Score: 33.8834 bits (76), Expect = 3.580e-13
Identity = 14/33 (42.42%), Postives = 19/33 (57.58%), Query Frame = 3 
Query:  948 QGVEALIRKFREKVFRCKRSDFLPFVFWEHRDG 1046
            QG++AL   F+   F C   ++LP VF   RDG
Sbjct:  557 QGLDALKEHFKNSKFPCDSDEYLPVVFSPPRDG 589
[Close]
BLAST of rna-TanjilR_01652 vs. DB:Swiss
Match: EAR1_ORYSJ (Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PLA2 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.699e-13
Identity = 40/122 (32.79%), Postives = 52/122 (42.62%), Query Frame = 1 
Query:  478 LLKILDEHCFELNKNAE-----NVAAYSKFDFLYLPMDFRLKF*EPFFPLIYSDLSNNHLFGSYYIRKHAIEKKLSNLGYAFVNFTSPSAAFKFYMRFNGFVWNVTTNRKTCEINAAQYQVL 828
            LL +LD HC   N+  E         +S +DFLYLP+DF                 NN                  N+GY FVN TSP AA + Y  F+   W V  +RK C++  A+ Q L
Sbjct:  474 LLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDF-----------------NNKC----------------NVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGL 562

HSP 2 Score: 33.8834 bits (76), Expect = 3.699e-13
Identity = 14/33 (42.42%), Postives = 19/33 (57.58%), Query Frame = 3 
Query:  948 QGVEALIRKFREKVFRCKRSDFLPFVFWEHRDG 1046
            QG++AL   F+   F C   ++LP VF   RDG
Sbjct:  560 QGLDALKEHFKNSKFPCDSDEYLPVVFSPPRDG 592
[Close]
BLAST of rna-TanjilR_01652 vs. DB:Swiss
Match: TE1_MAIZE (Protein terminal ear1 OS=Zea mays OX=4577 GN=TE1 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 3.521e-12
Identity = 37/120 (30.83%), Postives = 52/120 (43.33%), Query Frame = 1 
Query:  478 LLKILDEHCFELNK---NAENVAAYSKFDFLYLPMDFRLKF*EPFFPLIYSDLSNNHLFGSYYIRKHAIEKKLSNLGYAFVNFTSPSAAFKFYMRFNGFVWNVTTNRKTCEINAAQYQVL 828
            LL +LD HC + N+    +     +S +DF+YLP+DF                 NN                  N+GY FVN TSP A  + Y  F+   W V  +RK C++  A+ Q L
Sbjct:  457 LLNMLDNHCIQSNEWIVASGEEQPFSAYDFVYLPIDF-----------------NNKC----------------NVGYGFVNLTSPEARVRLYKAFHKQPWEVYNSRKICQVTYARVQGL 543

HSP 2 Score: 33.8834 bits (76), Expect = 3.521e-12
Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 3 
Query:  948 QGVEALIRKFREKVFRCKRSDFLPFVFWEHRDG 1046
            QG+EAL   F+   F C   ++LP  F   RDG
Sbjct:  541 QGLEALKEHFKNSKFPCDSDEYLPVAFSPARDG 573
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01652 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
EAR1_ORYSI3.580e-1332.79Protein terminal ear1 homolog OS=Oryza sativa subs... [more]
EAR1_ORYSJ3.699e-1332.79Protein terminal ear1 homolog OS=Oryza sativa subs... [more]
TE1_MAIZE3.521e-1230.83Protein terminal ear1 OS=Zea mays OX=4577 GN=TE1 P... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 76..202
e-value: 3.2E-5
score: 26.0
IPR007201Mei2/Mei2-like, C-terminal RNA recognition motifPFAMPF04059RRM_2coord: 84..197
e-value: 9.0E-19
score: 67.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..38
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 84..186

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_01652_La_Tanjil_v1.0 ID=rna-TanjilR_01652_La_Tanjil_v1.0; Name=rna-TanjilR_01652; organism=Lupinus angustifolius; type=mRNA; length=1112bp
ATGGCAACTCGCCCTCTTAACCCTAACGCTCAACCGTTTTACCCTCCCAA
TACACTTCATAACCAACATGTTTCTGCTGAATCTACCAACCAAAATATAA
CGAGGAGTGGAAGGAATAGGGCTAAGTATGAATGGAGGATGAAGGGAACA
AGACCAACAACAAGCAAGGGAAAACTTCCATATAATGATGGTTGTGCAAC
TCGTGGAAATGTGATTCCATTTCCTACAACCATTGAGAAATCCAGCATAA
CCACTGTTATGATTCGTAATATCCCTAATCAGTTCACGTAACCAcacact
ctctctctctaacCCTCCTTTCATATGCTTTGACATCTTTGTTTTCAATA
ATGCCACATTAGTCTTACATTCGTGCATGATATACCATTAGTATGTGTCA
TGTGACTATGTGAGATTTTGCTTAGTAAAGTTCTGAACATGGCTTATCTA
CTCTTCATAATTCTTAGGTTCTGTGATTTGTTGAAAATACTAGATGAGCA
CTGTTTCGAGCTAAACAAGAACGCTGAAAATGTTGCTGCTTATTCCAAGT
TCGATTTCCTCTATTTGCCTATGGACTTCAGGTTGAAATTTTAGGAACCA
TTTTTTCCTTTGATTTACTCTGATTTGtctaataatcatttatttggTTC
ATATTATATCAGAAAACATGCGATAGAGAAAAAGTTATCCAATTTGGGAT
ATGCCTTTGTGAACTTCACCTCTCCCTCTGCTGCATTTAAATTCTATATG
CGATTTAATGGTTTTGTTTGGAACGTCACCACAAACCGCAAAACATGTGA
GATAAACGCAGCACAATATCAGGTTTTGCTCCCATATCATGTACTTGTTC
ATAATTTTTCCTAACATTGTCATCAAAAAATGTGGTTCACATAACTTCCG
TTTTCCCAATTTTATCTCCTTTGATTCTGTTATTGGTGTGAAATAATCAG
GGTGTAGAGGCTTTGATACGAAAATTCCGTGAAAAAGTATTCCGTTGCAA
GCGAAGTGATTTTCTTCCTTTCGTGTTCTGGGAACATCGTGACGGATTCA
ATTCCCAAGTGGTGGGAACCACCGTGGGAAAACATATCTGGGGTTTGCCT
CGAAGAACCTGA
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protein sequence of rna-TanjilR_01652_La_Tanjil_v1.0

>rna-TanjilR_01652_La_Tanjil_v1.0 ID=rna-TanjilR_01652_La_Tanjil_v1.0; Name=rna-TanjilR_01652_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=240bp
MATRPLNPNAQPFYPPNTLHNQHVSAESTNQNITRSGRNRAKYEWRMKGT
RPTTSKGKLPYNDGCATRGNVIPFPTTIEKSSITTVMIRNIPNQFTFCDL
LKILDEHCFELNKNAENVAAYSKFDFLYLPMDFRKHAIEKKLSNLGYAFV
NFTSPSAAFKFYMRFNGFVWNVTTNRKTCEINAAQYQGVEALIRKFREKV
FRCKRSDFLPFVFWEHRDGFNSQVVGTTVGKHIWGLPRRT
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mRNA from alignment at Chr_LG09-CM007369.1:18350242..18351353+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_01652_La_Tanjil_v1.0 ID=rna-TanjilR_01652_La_Tanjil_v1.0; Name=rna-TanjilR_01652; organism=Lupinus angustifolius; type=mRNA; length=1112bp; location=Sequence derived from: Chr_LG09-CM007369.1:18350242..18351353+ (Lupinus angustifolius
ATGGCAACTCGCCCTCTTAACCCTAACGCTCAACCGTTTTACCCTCCCAA
TACACTTCATAACCAACATGTTTCTGCTGAATCTACCAACCAAAATATAA
CGAGGAGTGGAAGGAATAGGGCTAAGTATGAATGGAGGATGAAGGGAACA
AGACCAACAACAAGCAAGGGAAAACTTCCATATAATGATGGTTGTGCAAC
TCGTGGAAATGTGATTCCATTTCCTACAACCATTGAGAAATCCAGCATAA
CCACTGTTATGATTCGTAATATCCCTAATCAGTTCACGTAACCAcacact
ctctctctctaacCCTCCTTTCATATGCTTTGACATCTTTGTTTTCAATA
ATGCCACATTAGTCTTACATTCGTGCATGATATACCATTAGTATGTGTCA
TGTGACTATGTGAGATTTTGCTTAGTAAAGTTCTGAACATGGCTTATCTA
CTCTTCATAATTCTTAGGTTCTGTGATTTGTTGAAAATACTAGATGAGCA
CTGTTTCGAGCTAAACAAGAACGCTGAAAATGTTGCTGCTTATTCCAAGT
TCGATTTCCTCTATTTGCCTATGGACTTCAGGTTGAAATTTTAGGAACCA
TTTTTTCCTTTGATTTACTCTGATTTGtctaataatcatttatttggTTC
ATATTATATCAGAAAACATGCGATAGAGAAAAAGTTATCCAATTTGGGAT
ATGCCTTTGTGAACTTCACCTCTCCCTCTGCTGCATTTAAATTCTATATG
CGATTTAATGGTTTTGTTTGGAACGTCACCACAAACCGCAAAACATGTGA
GATAAACGCAGCACAATATCAGGTTTTGCTCCCATATCATGTACTTGTTC
ATAATTTTTCCTAACATTGTCATCAAAAAATGTGGTTCACATAACTTCCG
TTTTCCCAATTTTATCTCCTTTGATTCTGTTATTGGTGTGAAATAATCAG
GGTGTAGAGGCTTTGATACGAAAATTCCGTGAAAAAGTATTCCGTTGCAA
GCGAAGTGATTTTCTTCCTTTCGTGTTCTGGGAACATCGTGACGGATTCA
ATTCCCAAGTGGTGGGAACCACCGTGGGAAAACATATCTGGGGTTTGCCT
CGAAGAACCTGA
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Coding sequence (CDS) from alignment at Chr_LG09-CM007369.1:18350242..18351353+

>rna-TanjilR_01652_La_Tanjil_v1.0 ID=rna-TanjilR_01652_La_Tanjil_v1.0; Name=rna-TanjilR_01652; organism=Lupinus angustifolius; type=CDS; length=723bp; location=Sequence derived from: Chr_LG09-CM007369.1:18350242..18351353+ (Lupinus angustifolius
ATGGCAACTCGCCCTCTTAACCCTAACGCTCAACCGTTTTACCCTCCCAA
TACACTTCATAACCAACATGTTTCTGCTGAATCTACCAACCAAAATATAA
CGAGGAGTGGAAGGAATAGGGCTAAGTATGAATGGAGGATGAAGGGAACA
AGACCAACAACAAGCAAGGGAAAACTTCCATATAATGATGGTTGTGCAAC
TCGTGGAAATGTGATTCCATTTCCTACAACCATTGAGAAATCCAGCATAA
CCACTGTTATGATTCGTAATATCCCTAATCAGTTCACGTTCTGTGATTTG
TTGAAAATACTAGATGAGCACTGTTTCGAGCTAAACAAGAACGCTGAAAA
TGTTGCTGCTTATTCCAAGTTCGATTTCCTCTATTTGCCTATGGACTTCA
GAAAACATGCGATAGAGAAAAAGTTATCCAATTTGGGATATGCCTTTGTG
AACTTCACCTCTCCCTCTGCTGCATTTAAATTCTATATGCGATTTAATGG
TTTTGTTTGGAACGTCACCACAAACCGCAAAACATGTGAGATAAACGCAG
CACAATATCAGGGTGTAGAGGCTTTGATACGAAAATTCCGTGAAAAAGTA
TTCCGTTGCAAGCGAAGTGATTTTCTTCCTTTCGTGTTCTGGGAACATCG
TGACGGATTCAATTCCCAAGTGGTGGGAACCACCGTGGGAAAACATATCT
GGGGTTTGCCTCGAAGAACCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR007201Mei2-like_Rrm_C
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding