rna-TanjilR_06522

Transcript Overview
Namerna-TanjilR_06522
Unique Namerna-TanjilR_06522_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1800
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG13-CM007373.1supercontigChr_LG13-CM007373.1:3675219..3677018 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL074Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR238Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR246Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR250Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0312Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0263Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR0333Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0357Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0255Pisum sativum Cameor genome v1aPisum sativum
anpsR0270Pisum sativum Cameor genome v1aPisum sativum
anpvR0322Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0331Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0258Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0274Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0292Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0298Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0343Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0281Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0261Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0262Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0301Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0303Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0277Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0295Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0242Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0289Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvuaR0258Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0319Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0237Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0283Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0324Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0264Cicer arietinum
ancarR0295Cicer arietinum
anccaR0238Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0256Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0324Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0340Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0284Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0301Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0319Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0318Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0335Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0334Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR0243Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0320Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0331Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0262Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr05.2157.4.62113177Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun05g225000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat05G0739000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_14148Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigan.07G086900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_014645079.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat5g265480.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_027332400.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg44000.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.1g038040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan05g158700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cc_v2.0_23868.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun05g225000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
PvulFLAVERTChr05.1000852Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Hedin2.R1.1g056400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.005G113300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va05G045670.3Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigst.07G065500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058920836.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cr_11471.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_00755.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vum_07G00699.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_06522gene-TanjilG_06522_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06522rna-TanjilR_06522_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_06522_La_Tanjil_v1.0rna-TanjilR_06522_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06522_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3676398..3677018rna-TanjilR_06522_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3676398..3677018Lupinus angustifoliusCDS
rna-TanjilR_06522_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675885..3676091rna-TanjilR_06522_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675885..3676091Lupinus angustifoliusCDS
rna-TanjilR_06522_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675420..3675769rna-TanjilR_06522_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675420..3675769Lupinus angustifoliusCDS
rna-TanjilR_06522_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675219..3675345rna-TanjilR_06522_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675219..3675345Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06522_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3676398..3677018rna-TanjilR_06522_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3676398..3677018Lupinus angustifoliusexon
rna-TanjilR_06522_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675885..3676091rna-TanjilR_06522_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675885..3676091Lupinus angustifoliusexon
rna-TanjilR_06522_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675420..3675769rna-TanjilR_06522_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675420..3675769Lupinus angustifoliusexon
rna-TanjilR_06522_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675219..3675345rna-TanjilR_06522_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3675219..3675345Lupinus angustifoliusexon


Homology
[Close]
BLAST of rna-TanjilR_06522 vs. DB:Swiss
Match: COL12_ARATH (Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana OX=3702 GN=COL12 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 3.158e-33
Identity = 61/109 (55.96%), Postives = 78/109 (71.56%), Query Frame = 1 
Query:    1 MEPLCEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNKCNSQSAIVYCMDEKVSLCQGCDWNHKGCSLLGHRRQALECYSGCPSLTELPSFLSFVID 327
            MEP C+ C   +A++YCKSD A+LCLNCDV VH AN LS+RH RS++C KC SQ A + C+DEKVS CQGC W+   CS LGHR Q+L  +SGCPS T+     S +++
Sbjct:    1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRCLDEKVSYCQGCHWHESNCSELGHRVQSLNPFSGCPSPTDFNRMWSSILE 109

HSP 2 Score: 78.5666 bits (192), Expect = 6.164e-28
Identity = 43/92 (46.74%), Postives = 53/92 (57.61%), Query Frame = 2 
Query: 1349 EPMPPNGNENINLGFH-------HGQVHSSMPLSLPNITGESSTTDFQDCGLPPGFMTGEPPPWESILEASTPQAREKAKLRYFEKKKTRRY 1603
            E  PP    NIN G          GQ+H S+     NITGE++  D+QDCG+ PGF+  E  PWE+  E S PQAR +AKLRY EKK  R +
Sbjct:  238 EASPPGQQMNINTGLQLPLSPVLFGQIHPSL-----NITGENNAADYQDCGMSPGFIMSE-APWETNFEVSCPQARNEAKLRYKEKKLKRSF 323

HSP 3 Score: 68.9366 bits (167), Expect = 6.164e-28
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 1 
Query: 1675 FGKQIRYESRKARADTRKRVKGRFVKAGEEFDYDPRGEKS 1794
            FGKQIRY SRKARADTRKRVKGRFVKAG+ +DYDP    +
Sbjct:  323 FGKQIRYASRKARADTRKRVKGRFVKAGDSYDYDPSSPTT 362
[Close]
BLAST of rna-TanjilR_06522 vs. DB:Swiss
Match: COL11_ARATH (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 3.945e-32
Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = 1 
Query:    1 MEPLCEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNKCNSQSAIVYCMDEKVSLCQGCDWNHKGCSLLGHRRQALECYSGCPSLTELPSFLSFVID 327
            ME  C+FC   +A++YCKSDSA+LCLNCDV+VH AN LS RH+RS+LC KC+ Q   V+CM+E VSLCQGC W    C+ LGHR Q+L  YS CPS ++     S  ++
Sbjct:    1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHCMNENVSLCQGCQWTASNCTGLGHRLQSLNPYSDCPSPSDFGKIWSSTLE 109

HSP 2 Score: 68.5514 bits (166), Expect = 1.418e-22
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 1 
Query: 1675 FGKQIRYESRKARADTRKRVKGRFVKAGEEFDYDP 1779
            FGKQIRY SRKARADTRKRVKGRFVK+GE F+YDP
Sbjct:  292 FGKQIRYASRKARADTRKRVKGRFVKSGETFEYDP 326

HSP 3 Score: 60.8474 bits (146), Expect = 1.418e-22
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 2 
Query: 1400 GQVHSSMPLSLPNITGESSTTDFQDCGLPPGFMTGEPPPWESILEAS-TPQAREKA 1564
            G V  +M LS+ N+TGES+ TD+QDCG+ PGF+ G+  PWES +E S  P+ R++A
Sbjct:  225 GNVVPNMSLSMSNLTGESNATDYQDCGISPGFLIGD-SPWESNVEVSFNPKLRDEA 279
[Close]
BLAST of rna-TanjilR_06522 vs. DB:Swiss
Match: COL10_ARATH (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.017e-30
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 1 
Query:    1 MEPLCEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNKCNSQSAIVYCMDEKVSLCQGCDWN-HKG---CSLLGHRRQALECYSGCPSLTELPSFLSFVID 327
            M  +C+FC   R++VYC+SD+A LCL+CD +VH ANALS RHSR+++C +CN+Q A V C DE+VSLCQ CDW+ H G    +   H+RQ + CYSGCPS  EL S  SF +D
Sbjct:    1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMD 113

HSP 2 Score: 56.6102 bits (135), Expect = 1.192e-16
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 1 
Query: 1672 RFGKQIRYESRKARADTRKRVKGRFVKAGEEFDYDP 1779
            +F K++RY SRK RAD R+RVKGRFVK+GE +DYDP
Sbjct:  331 KFDKRVRYVSRKERADVRRRVKGRFVKSGEAYDYDP 366

HSP 3 Score: 52.7582 bits (125), Expect = 1.192e-16
Identity = 38/111 (34.23%), Postives = 56/111 (50.45%), Query Frame = 2 
Query: 1295 RDDSPASMMQ--GISNNAICEPMPPNGNENINLGFHHGQVHSSMPLSLPNITGESSTTDFQDCGLPP-GFMTGEPPPW-----ESILEASTPQAREKAKLRYFEKKKTRRY 1603
            +D++    MQ   +SNNA  +       E I + +     HS+  +S   ITGES+  DFQDCG      ++ EP PW     + I+ +S    R  A +RY EKKK R++
Sbjct:  225 KDEAHEGSMQQPALSNNASADSFMTCRTEPI-ICYSSKPAHSN--ISFSGITGESNAGDFQDCGASSMKQLSREPQPWCHPTAQDIIASSHATTRNNAVMRYKEKKKARKF 332
[Close]
BLAST of rna-TanjilR_06522 vs. DB:Swiss
Match: COL9_ARATH (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.264e-29
Identity = 61/120 (50.83%), Postives = 81/120 (67.50%), Query Frame = 1 
Query:    1 MEPLCEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNKCNSQSAIVYCMDEKVSLCQGCDWN-----------HKGCSLLGHRRQALECYSGCPSLTELPSFLSFVID 327
            M  +C+FC   R++VYC+SD+A LCL+CD SVH ANALS RHSR+++C +CN+Q A V C++E+VSLCQ CDW+               S   H+RQ + CYSGCPS +EL S  SF +D
Sbjct:    1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD 120

HSP 2 Score: 60.077 bits (144), Expect = 4.141e-16
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = 1 
Query: 1672 RFGKQIRYESRKARADTRKRVKGRFVKAGEEFDYDP 1779
            +F K++RY SRKARAD R+RVKGRFVKAGE +DYDP
Sbjct:  330 KFDKRVRYASRKARADVRRRVKGRFVKAGEAYDYDP 365

HSP 3 Score: 47.3654 bits (111), Expect = 4.141e-16
Identity = 26/65 (40.00%), Postives = 36/65 (55.38%), Query Frame = 2 
Query: 1424 LSLPNITGESSTTDFQDCGLPPGF-MTGEPPPWESILE----ASTPQAREKAKLRYFEKKKTRRY 1603
            +S   +TGESS  DFQ+CG      ++GEPP +   L+     S    R  A +RY EKKK R++
Sbjct:  267 ISFSGVTGESSAGDFQECGASSSIQLSGEPPWYPPTLQDNNACSHSVTRNNAVMRYKEKKKARKF 331
[Close]
BLAST of rna-TanjilR_06522 vs. DB:Swiss
Match: COLX_ARATH (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68190 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 8.021e-26
Identity = 52/108 (48.15%), Postives = 66/108 (61.11%), Query Frame = 1 
Query:    1 MEPLCEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNKCNSQSAIVYCMDEKVSLCQGCDWNHKGCSLLGHRRQALECYSGCPSLTELPSFLSFVI 324
            ME +CEFC   RAVVYC +D+A LCL CD  VH AN+LS RH R+VLC+ C +Q  +V C D K+ LC GC+    G     HRR+ L CY+GCP   +      F +
Sbjct:   10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRCFDHKMFLCHGCNDKFHGGGSSEHRRRDLRCYTGCPPAKDFAVMWGFRV 117
[Close]
BLAST of rna-TanjilR_06522 vs. DB:Swiss
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana OX=3702 GN=COL13 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.904e-22
Identity = 53/121 (43.80%), Postives = 74/121 (61.16%), Query Frame = 1 
Query:   10 LCEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNKCNSQSAIVYCMDEKVSLCQGCDWNHKGCSLLGHRRQALECYSGCPSLTELPSFLSFVIDAISSCGGGLDHGWES 372
            LC++C    A+VYCK+DSA+LCL CD  VH AN L  +H RS+LC+ CN   + ++C  E+  LCQ CDW H   S   H R+  E ++GCPS+ EL + +   +D ++   G L   WES
Sbjct:   12 LCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTASSSLHSRRPFEGFTGCPSVPELLAIVG--LDDLTLDSGLL---WES 127
[Close]
BLAST of rna-TanjilR_06522 vs. DB:Swiss
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana OX=3702 GN=COL14 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 5.093e-20
Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = 1 
Query:   13 CEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNKCNSQSAIVYCMDEKVSLCQGCDWN-HKGCSLLG-HRRQALECYSGCPSLTELPS 306
            CEFC    AV++C++D+A+LCL CD  VH AN LS +H RS +C+ C+ +   V C  + + LCQ CDW+ H  CS    H R A+E +SGCPS+ EL +
Sbjct:   12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAA 111
[Close]
BLAST of rna-TanjilR_06522 vs. DB:Swiss
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana OX=3702 GN=COL15 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.881e-19
Identity = 46/107 (42.99%), Postives = 67/107 (62.62%), Query Frame = 1 
Query:   13 CEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNKCNSQSAIVYCMDEKVSLCQGCDWN-HKGCSLL-GHRRQALECYSGCPSLTELPSFLSFVID 327
            C+FC    AV++C++D+A+LCL CD  VH AN LS +H RS +C+ C ++   V C  + + LCQ CDW+ H  CS+   H R A+E +SGCPS  EL +     ++
Sbjct:    9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLDLE 115

HSP 2 Score: 49.6766 bits (117), Expect = 7.915e-7
Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 1 
Query: 1672 RFGKQIRYESRKARADTRKRVKGRFVKAGE 1761
            R+ K IRYESRKARADTR RV+GRFVKA E
Sbjct:  400 RYDKTIRYESRKARADTRLRVRGRFVKASE 429

HSP 3 Score: 26.1794 bits (56), Expect = 7.915e-7
Identity = 12/20 (60.00%), Postives = 13/20 (65.00%), Query Frame = 2 
Query: 1544 PQAREKAKLRYFEKKKTRRY 1603
             Q R  A  RY EK+KTRRY
Sbjct:  382 AQNRGDAMQRYKEKRKTRRY 401
[Close]
BLAST of rna-TanjilR_06522 vs. DB:Swiss
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 3.495e-10
Identity = 32/85 (37.65%), Postives = 46/85 (54.12%), Query Frame = 1 
Query:   10 LCEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNKCNSQSAIVYCMDEKVSLCQGCDWNHKGCSLLGHRRQAL 264
            LC+ C    A +YC+ D+A LCL+CD  VH AN L+ RH+R  +C  C    A V C  +  +LC  CD +    + L  R + +
Sbjct:    5 LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 89
[Close]
BLAST of rna-TanjilR_06522 vs. DB:Swiss
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 3.602e-10
Identity = 32/84 (38.10%), Postives = 42/84 (50.00%), Query Frame = 1 
Query:   13 CEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNKCNSQSAIVYCMDEKVSLCQGCDWNHKGCSLLGHRRQAL 264
            C+ C      VYC++DSA LC +CD  VH AN L+ RH R  +C  C    A  +C  +  SLC  CD      + L  R Q +
Sbjct:   12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRV 95
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_06522 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
COL12_ARATH3.158e-3355.96Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsi... [more]
COL11_ARATH3.945e-3255.05Putative zinc finger protein CONSTANS-LIKE 11 OS=A... [more]
COL10_ARATH2.017e-3054.87Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsi... [more]
COL9_ARATH2.264e-2950.83Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis... [more]
COLX_ARATH8.021e-2648.15Putative zinc finger protein At1g68190 OS=Arabidop... [more]
COL13_ARATH1.904e-2243.80Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsi... [more]
COL14_ARATH5.093e-2047.00Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsi... [more]
COL15_ARATH3.881e-1942.99Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsi... [more]
COL4_ARATH3.495e-1037.65Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis... [more]
COL1_ARATH3.602e-1038.10Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 48..88
e-value: 2.9
score: 2.6
coord: 1..47
e-value: 1.2E-5
score: 34.7
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 46..86
e-value: 4.8E-5
score: 23.4
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 43..88
score: 9.869
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 1..47
score: 8.93
IPR000315B-box-type zinc fingerCDDcd00021BBOXcoord: 3..44
e-value: 2.43102E-5
score: 39.1928
IPR010402CCT domainPFAMPF06203CCTcoord: 378..420
e-value: 2.3E-15
score: 56.3
IPR010402CCT domainPROSITEPS51017CCTcoord: 378..420
score: 14.723

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_06522_La_Tanjil_v1.0 ID=rna-TanjilR_06522_La_Tanjil_v1.0; Name=rna-TanjilR_06522; organism=Lupinus angustifolius; type=mRNA; length=1800bp
ATGGAACCTCTATGTGAGTTTTGTGTGGTTGTAAGAGCTGTGGTTTATTG
CAAATCAGATTCTGCTCGTCTATGCTTGAATTGTGATGTGAGTGTACATG
GTGCTAACGCTTTATCCTATAGACACTCACGTTCTGTTCTATGTAACAAG
TGCAATTCTCAATCAGCAATTGTCTACTGCATGGATGAAAAAGTGTCTCT
ATGTCAAGGTTGTGATTGGAACCATAAAGGGTGTTCTCTATTAGGACATC
GGCGTCAGGCTTTGGAATGTTATAGTGGTTGTCCCTCTTTAACTGAGTTG
CCTAGTTTCTTGTCCTTTGTGATTGATGCCATTTCCTCATGTGGTGGTGG
TTTAGATCATGGTTGGGAATCACTTAGTACAACATTGTCTAGTAAAAATG
ACACTTGCACTAGCAAGTCTTTTGAGCAAGAGCAACCGAATAACGATGAT
GGCATTGACACTTTTGATTTGGTGAGTGGCAAGTTGAATGAAATTGAAGA
ATGTGTTAAACCTGAGCCTTGGGTTGAGCAACCTACCACCATTCCACAAC
AAAATCCAAATCACGCGCCGTACACGATGGATCAGACAATTTTCTGTCCA
CAGGACTCGAACCTTCCAGAGGTATATTATTACTACTAATACCTTCTAGT
TTTATTTTAATGTTCAGTAACATATGCATATTAGTTTGATTTTAATGATA
ATGCTCATTTGATTGACGTATACATAGTTTGAATTTCATTTATTTCACAA
GGAAACAAGTTCTATACTAATGACAACAGTGTTCAGAACCTGCACTGTAA
GAGGTAGTAACATACTTTGTACATTAAACTAATTCTAACCATACTATGTT
ATCTTTATTAATTATTAACCAAAAGTTGAACCATATTTTTTGTTATATAA
TAATTACTTTTTACCATTTAGCTGCAGGAATGTCCGAATCTTAAGGGCTT
AGGAATCAGCGATGACGATGATCTCAACATAGATAATTTTAAACTTAATT
TTGAAAAGAGAGATGAAATTTTTGATTGCTCTCAAGTTGCCACAAGATAT
CACCTTGATAAGGGGGAAATAGACTGTTCATTAATGTGGAAAAAGATATC
AGAATCTAAATATCTTATTGAGAGTGCCATGGAGGTTAGCAGCAACTTTT
TCTTTAAGTTTTATGCTCTCTAAAAATCCTTATCTGTACAAGGTTTAATC
GAGAAACAAATGCCGGAAACTAATATTGTCACTCTTGTAATTTTCTTAGG
CATCATCATCATTCCAACAAGATTGTGTGGCTTTTCAGTCATCAAGAGAT
GATAGCCCTGCTAGTATGATGCAGGGAATCAGCAATAATGCGATTTGCGA
GCCTATGCCTCCTAACGGCAATGAAAACATCAATTTAGGATTTCATCATG
GACAAGTTCATTCAAGCATGCCACTTTCATTGCCCAACATCACTGGTGAA
AGTAGTACTACAGATTTTCAAGATTGTGGATTACCACCAGGTTTTATGAC
AGGTGAACCACCTCCTTGGGAATCAATTTTGGAGGCTTCGACCCCACAAG
CCAGGGAGAAAGCTAAATTGAGATACTTTGAGAAAAAGAAAACTCGGAGG
TATGTATCTTCAACTCTTTGGCTCTTTGTATGGTAAGGAATCCTAAGTAG
TTTGCTCGAATTTGTTTTTGTAGGTTTGGTAAGCAAATAAGATATGAATC
TCGCAAAGCAAGGGCTGATACGAGAAAACGCGTGAAAGGTAGATTTGTGA
AAGCTGGTGAAGAATTCGATTATGATCCTCGAGGGGAGAAGAGTTTCTAA
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protein sequence of rna-TanjilR_06522_La_Tanjil_v1.0

>rna-TanjilR_06522_La_Tanjil_v1.0 ID=rna-TanjilR_06522_La_Tanjil_v1.0; Name=rna-TanjilR_06522_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=434bp
MEPLCEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNK
CNSQSAIVYCMDEKVSLCQGCDWNHKGCSLLGHRRQALECYSGCPSLTEL
PSFLSFVIDAISSCGGGLDHGWESLSTTLSSKNDTCTSKSFEQEQPNNDD
GIDTFDLVSGKLNEIEECVKPEPWVEQPTTIPQQNPNHAPYTMDQTIFCP
QDSNLPEECPNLKGLGISDDDDLNIDNFKLNFEKRDEIFDCSQVATRYHL
DKGEIDCSLMWKKISESKYLIESAMEASSSFQQDCVAFQSSRDDSPASMM
QGISNNAICEPMPPNGNENINLGFHHGQVHSSMPLSLPNITGESSTTDFQ
DCGLPPGFMTGEPPPWESILEASTPQAREKAKLRYFEKKKTRRFGKQIRY
ESRKARADTRKRVKGRFVKAGEEFDYDPRGEKSF
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mRNA from alignment at Chr_LG13-CM007373.1:3675219..3677018-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_06522_La_Tanjil_v1.0 ID=rna-TanjilR_06522_La_Tanjil_v1.0; Name=rna-TanjilR_06522; organism=Lupinus angustifolius; type=mRNA; length=1800bp; location=Sequence derived from: Chr_LG13-CM007373.1:3675219..3677018- (Lupinus angustifolius
ATGGAACCTCTATGTGAGTTTTGTGTGGTTGTAAGAGCTGTGGTTTATTG
CAAATCAGATTCTGCTCGTCTATGCTTGAATTGTGATGTGAGTGTACATG
GTGCTAACGCTTTATCCTATAGACACTCACGTTCTGTTCTATGTAACAAG
TGCAATTCTCAATCAGCAATTGTCTACTGCATGGATGAAAAAGTGTCTCT
ATGTCAAGGTTGTGATTGGAACCATAAAGGGTGTTCTCTATTAGGACATC
GGCGTCAGGCTTTGGAATGTTATAGTGGTTGTCCCTCTTTAACTGAGTTG
CCTAGTTTCTTGTCCTTTGTGATTGATGCCATTTCCTCATGTGGTGGTGG
TTTAGATCATGGTTGGGAATCACTTAGTACAACATTGTCTAGTAAAAATG
ACACTTGCACTAGCAAGTCTTTTGAGCAAGAGCAACCGAATAACGATGAT
GGCATTGACACTTTTGATTTGGTGAGTGGCAAGTTGAATGAAATTGAAGA
ATGTGTTAAACCTGAGCCTTGGGTTGAGCAACCTACCACCATTCCACAAC
AAAATCCAAATCACGCGCCGTACACGATGGATCAGACAATTTTCTGTCCA
CAGGACTCGAACCTTCCAGAGGTATATTATTACTACTAATACCTTCTAGT
TTTATTTTAATGTTCAGTAACATATGCATATTAGTTTGATTTTAATGATA
ATGCTCATTTGATTGACGTATACATAGTTTGAATTTCATTTATTTCACAA
GGAAACAAGTTCTATACTAATGACAACAGTGTTCAGAACCTGCACTGTAA
GAGGTAGTAACATACTTTGTACATTAAACTAATTCTAACCATACTATGTT
ATCTTTATTAATTATTAACCAAAAGTTGAACCATATTTTTTGTTATATAA
TAATTACTTTTTACCATTTAGCTGCAGGAATGTCCGAATCTTAAGGGCTT
AGGAATCAGCGATGACGATGATCTCAACATAGATAATTTTAAACTTAATT
TTGAAAAGAGAGATGAAATTTTTGATTGCTCTCAAGTTGCCACAAGATAT
CACCTTGATAAGGGGGAAATAGACTGTTCATTAATGTGGAAAAAGATATC
AGAATCTAAATATCTTATTGAGAGTGCCATGGAGGTTAGCAGCAACTTTT
TCTTTAAGTTTTATGCTCTCTAAAAATCCTTATCTGTACAAGGTTTAATC
GAGAAACAAATGCCGGAAACTAATATTGTCACTCTTGTAATTTTCTTAGG
CATCATCATCATTCCAACAAGATTGTGTGGCTTTTCAGTCATCAAGAGAT
GATAGCCCTGCTAGTATGATGCAGGGAATCAGCAATAATGCGATTTGCGA
GCCTATGCCTCCTAACGGCAATGAAAACATCAATTTAGGATTTCATCATG
GACAAGTTCATTCAAGCATGCCACTTTCATTGCCCAACATCACTGGTGAA
AGTAGTACTACAGATTTTCAAGATTGTGGATTACCACCAGGTTTTATGAC
AGGTGAACCACCTCCTTGGGAATCAATTTTGGAGGCTTCGACCCCACAAG
CCAGGGAGAAAGCTAAATTGAGATACTTTGAGAAAAAGAAAACTCGGAGG
TATGTATCTTCAACTCTTTGGCTCTTTGTATGGTAAGGAATCCTAAGTAG
TTTGCTCGAATTTGTTTTTGTAGGTTTGGTAAGCAAATAAGATATGAATC
TCGCAAAGCAAGGGCTGATACGAGAAAACGCGTGAAAGGTAGATTTGTGA
AAGCTGGTGAAGAATTCGATTATGATCCTCGAGGGGAGAAGAGTTTCTAA
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Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:3675219..3677018-

>rna-TanjilR_06522_La_Tanjil_v1.0 ID=rna-TanjilR_06522_La_Tanjil_v1.0; Name=rna-TanjilR_06522; organism=Lupinus angustifolius; type=CDS; length=1305bp; location=Sequence derived from: Chr_LG13-CM007373.1:3675219..3677018- (Lupinus angustifolius
ATGGAACCTCTATGTGAGTTTTGTGTGGTTGTAAGAGCTGTGGTTTATTG
CAAATCAGATTCTGCTCGTCTATGCTTGAATTGTGATGTGAGTGTACATG
GTGCTAACGCTTTATCCTATAGACACTCACGTTCTGTTCTATGTAACAAG
TGCAATTCTCAATCAGCAATTGTCTACTGCATGGATGAAAAAGTGTCTCT
ATGTCAAGGTTGTGATTGGAACCATAAAGGGTGTTCTCTATTAGGACATC
GGCGTCAGGCTTTGGAATGTTATAGTGGTTGTCCCTCTTTAACTGAGTTG
CCTAGTTTCTTGTCCTTTGTGATTGATGCCATTTCCTCATGTGGTGGTGG
TTTAGATCATGGTTGGGAATCACTTAGTACAACATTGTCTAGTAAAAATG
ACACTTGCACTAGCAAGTCTTTTGAGCAAGAGCAACCGAATAACGATGAT
GGCATTGACACTTTTGATTTGGTGAGTGGCAAGTTGAATGAAATTGAAGA
ATGTGTTAAACCTGAGCCTTGGGTTGAGCAACCTACCACCATTCCACAAC
AAAATCCAAATCACGCGCCGTACACGATGGATCAGACAATTTTCTGTCCA
CAGGACTCGAACCTTCCAGAGGAATGTCCGAATCTTAAGGGCTTAGGAAT
CAGCGATGACGATGATCTCAACATAGATAATTTTAAACTTAATTTTGAAA
AGAGAGATGAAATTTTTGATTGCTCTCAAGTTGCCACAAGATATCACCTT
GATAAGGGGGAAATAGACTGTTCATTAATGTGGAAAAAGATATCAGAATC
TAAATATCTTATTGAGAGTGCCATGGAGGCATCATCATCATTCCAACAAG
ATTGTGTGGCTTTTCAGTCATCAAGAGATGATAGCCCTGCTAGTATGATG
CAGGGAATCAGCAATAATGCGATTTGCGAGCCTATGCCTCCTAACGGCAA
TGAAAACATCAATTTAGGATTTCATCATGGACAAGTTCATTCAAGCATGC
CACTTTCATTGCCCAACATCACTGGTGAAAGTAGTACTACAGATTTTCAA
GATTGTGGATTACCACCAGGTTTTATGACAGGTGAACCACCTCCTTGGGA
ATCAATTTTGGAGGCTTCGACCCCACAAGCCAGGGAGAAAGCTAAATTGA
GATACTTTGAGAAAAAGAAAACTCGGAGGTTTGGTAAGCAAATAAGATAT
GAATCTCGCAAAGCAAGGGCTGATACGAGAAAACGCGTGAAAGGTAGATT
TGTGAAAGCTGGTGAAGAATTCGATTATGATCCTCGAGGGGAGAAGAGTT
TCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
IPR010402CCT_domain
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding