rna-TanjilR_07928

Transcript Overview


Name	rna-TanjilR_07928
Unique Name	rna-TanjilR_07928_La_Tanjil_v1.0
Type	mRNA
Organism	Lupinus angustifolius (blue lupin)
Sequence length	3333
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_LG15-CM007375.1	supercontig	Chr_LG15-CM007375.1:19025541..19028873 -	Lupinus angustifolius L. Tanjil genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Lupinus angustifolius L. Tanjil genome v1.0	2019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.0	2020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot	2020-01-28

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ananL262	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananR300	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananR303	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananR308	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ancaiR0419	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ancaiR0420	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ancaR0376	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ancaR0381	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ancaR0383	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anccR0463	Cajanus cajan Asha genome v1.0	Cajanus cajan
anccR0490	Cajanus cajan Asha genome v1.0	Cajanus cajan
ancrR0450	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ancrR0459	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
anpsR0326	Pisum sativum Cameor genome v1a	Pisum sativum
anpsR0330	Pisum sativum Cameor genome v1a	Pisum sativum
anpsR0349	Pisum sativum Cameor genome v1a	Pisum sativum
anpvR0406	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anpvR0448	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anvuR0363	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anvuR0370	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anasR0422	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anasR0447	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anzwsR0372	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
anzwsR0394	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
antifR0379	Vicia faba cv. Tiffany genome v1.0	Vicia faba
antifR0389	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvfhR0379	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
anvfhR0391	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
anvrvR0357	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvrvR0375	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvuaR0330	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvuaR0351	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvssR0420	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
anvssR0436	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ancanR0335	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
ancanR0342	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
anavjR0396	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjR0418	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
ancarR0368		Cicer arietinum
ancarR0383		Cicer arietinum
anccaR0336	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anccaR0357	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anvumR0414	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvumR0423	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvvaR0406	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvvaR0407	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvvaR0416	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvasR0423	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvstR0424	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvasR0432	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvstR0431	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anpvfR0420	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
anvunR0343	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
anvunR0351	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
anpvfR0463	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
Phvul.009G103300.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
rna-KK1_009362	Cajanus cajan Asha genome v1.0	Cajanus cajan
Vum_02G00762.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
rna-XM_027334107.1	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
evm.model.Chr09.1711.1.62113178	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.2g190600.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Va04G061830.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vigun09g199100.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
Vfaba.Hedin2.R1.3g199320.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
rna-XM_014644324.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
jg35873.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vigst.02G071300.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
PvulFLAVERTChr09.719	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
XM_058872598.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
LR48_mrnaVigan04g208100	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Ca_11005	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
XM_058924674.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
Cc_v2.0_06859.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Vfaba.Tiffany.R1.3g164120.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
Vigan.02G092900.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Vigun09g199100.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
rna-TanjilR_12538	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_32957	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-TanjilG_07928	gene-TanjilG_07928_La_Tanjil_v1.0	Lupinus angustifolius	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_07928	rna-TanjilR_07928_La_Tanjil_v1.0-protein	Lupinus angustifolius	polypeptide
rna-TanjilR_07928_La_Tanjil_v1.0	rna-TanjilR_07928_La_Tanjil_v1.0	Lupinus angustifolius	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19028862..19028873	rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19028862..19028873	Lupinus angustifolius	CDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026847..19026903	rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026847..19026903	Lupinus angustifolius	CDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026449..19026505	rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026449..19026505	Lupinus angustifolius	CDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026301..19026341	rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026301..19026341	Lupinus angustifolius	CDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026005..19026073	rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026005..19026073	Lupinus angustifolius	CDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025816..19025895	rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025816..19025895	Lupinus angustifolius	CDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025541..19025701	rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025541..19025701	Lupinus angustifolius	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19028862..19028873	rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19028862..19028873	Lupinus angustifolius	exon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026847..19026903	rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026847..19026903	Lupinus angustifolius	exon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026449..19026505	rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026449..19026505	Lupinus angustifolius	exon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026301..19026341	rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026301..19026341	Lupinus angustifolius	exon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026005..19026073	rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026005..19026073	Lupinus angustifolius	exon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025816..19025895	rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025816..19025895	Lupinus angustifolius	exon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025541..19025701	rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025541..19025701	Lupinus angustifolius	exon

Homology

[Close]

BLAST of rna-TanjilR_07928 vs. DB:Swiss
Match: GCT21_ARATH (Gamma-glutamylcyclotransferase 2-1 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.547e-24
Identity = 50/101 (49.50%), Postives = 59/101 (58.42%), Query Frame = 2

Query: 1535 MVFWVFGYGSLVWNPGFEYDEKIVGFIKDYRRVFDLGKCSFFLHAGEFVYCMHTID*VCIAFTNA*RFDFYLYFAACIDHRGTPEHPARTCTLEEKEGALC 1837
            MV WVFGYGSL+WNPGF++DEK++G+IKDY+RVFDL                                       ACIDHRGTPEHPARTCTLE+  GA+C
Sbjct:    1 MVLWVFGYGSLIWNPGFDFDEKLIGYIKDYKRVFDL---------------------------------------ACIDHRGTPEHPARTCTLEQSTGAIC 62

HSP 2 Score: 65.4698 bits (158), Expect = 1.829e-10
Identity = 46/122 (37.70%), Postives = 57/122 (46.72%), Query Frame = 1

Query: 2947 LIPLTCAYLFRQIATAHGPCGNNRDYLFLLEKAMHDIGKLSICTITVIVYDSLFKIMNFVDTKTDELRGFDL*CVGHEDNYVIELANEVRKELGIVNIVPKDKKLVAHP--THVPIPTLQLH 3306
            L P     + RQIATA GPCGNNR+YLF LEKAM DI                                       HE+ YVIELANEVRK+L +    P++ K +  P  +HV + + Q H
Sbjct:  128 LGPAPLEEMARQIATASGPCGNNREYLFKLEKAMFDI--------------------------------------EHEEEYVIELANEVRKQLDL----PEEVKALLKPIVSHVSVKS-QAH 206

[Close]

BLAST of rna-TanjilR_07928 vs. DB:Swiss
Match: GCT22_ARATH (Gamma-glutamylcyclotransferase 2-2 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.933e-23
Identity = 52/101 (51.49%), Postives = 57/101 (56.44%), Query Frame = 2

Query: 1535 MVFWVFGYGSLVWNPGFEYDEKIVGFIKDYRRVFDLGKCSFFLHAGEFVYCMHTID*VCIAFTNA*RFDFYLYFAACIDHRGTPEHPARTCTLEEKEGALC 1837
            MV WVFGYGSLVWNPGF YDEK++GFIK Y+RVFDL                                       ACIDHRGTPEHPARTCTLE+ E A+C
Sbjct:    1 MVMWVFGYGSLVWNPGFHYDEKVLGFIKGYKRVFDL---------------------------------------ACIDHRGTPEHPARTCTLEKAEEAIC 62

HSP 2 Score: 72.4034 bits (176), Expect = 1.146e-12
Identity = 52/136 (38.24%), Postives = 64/136 (47.06%), Query Frame = 1

Query: 2947 LIPLTCAYLFRQIATAHGPCGNNRDYLFLLEKAMHDIGKLSICTITVIVYDSLFKIMNFVDTKTDELRGFDL*CVGHEDNYVIELANEVRK---ELGIVNIVP-KDKKL--VAHPTHVPIPT----LQLHPIPITS 3324
            L P     + RQIATA+GPCGNNRDYLFLLEKAMHDI                                      GHE++YVIELANEVRK   E     + P K+ +   VA+ +   +PT    L  HP  + +
Sbjct:  128 LGPAPLEDMARQIATANGPCGNNRDYLFLLEKAMHDI--------------------------------------GHEEDYVIELANEVRKVLAESSTKKVTPVKESRASRVANKSKNNVPTAHQILPHHPEAVAT 225

[Close]

BLAST of rna-TanjilR_07928 vs. DB:Swiss
Match: GCT23_ARATH (Gamma-glutamylcyclotransferase 2-3 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;3 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.352e-11
Identity = 37/102 (36.27%), Postives = 42/102 (41.18%), Query Frame = 2

Query: 1535 MVFWVFGYGSLVWNPGFEYDEKIVGFIKDYRRVFDLGKCSFFLHAGEFVYCMHTID*VCIAFTNA*RFDFYLYFAACIDHRGTPEHPARTCTLEEKEGALCV 1840
            M  WVFGYGSL+W  GF +DE + GFIK YRRVF  G                                         DHRGTP+ P RT TLE     +C 
Sbjct:    1 MAMWVFGYGSLIWKTGFPFDESLPGFIKGYRRVFHQG---------------------------------------STDHRGTPDFPGRTVTLEAAHEEVCC 63

The following BLAST results are available for this feature:

BLAST of rna-TanjilR_07928 vs. DB:Swiss

BLAST of rna-TanjilR_07928 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
GCT21_ARATH	2.547e-24	49.50	Gamma-glutamylcyclotransferase 2-1 OS=Arabidopsis ...	[more]
GCT22_ARATH	1.933e-23	51.49	Gamma-glutamylcyclotransferase 2-2 OS=Arabidopsis ...	[more]
GCT23_ARATH	9.352e-11	36.27	Gamma-glutamylcyclotransferase 2-3 OS=Arabidopsis ...	[more]

InterPro

Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006840	Glutathione-specific gamma-glutamylcyclotransferase	PFAM	PF04752	ChaC	coord: 4..122 e-value: 1.6E-20 score: 73.9

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_LG15-CM007375.1:19025541..19028873-
coding sequence from alignment at Chr_LG15-CM007375.1:19025541..19028873-

mRNA sequence

>rna-TanjilR_07928_La_Tanjil_v1.0 ID=rna-TanjilR_07928_La_Tanjil_v1.0; Name=rna-TanjilR_07928; organism=Lupinus angustifolius; type=mRNA; length=3333bp
ATGTCTTTGATGGTATGTTATTTTCTTTACAGATTTACCTTCTTTGCAAT
TGTAGCCTTCTTATCAACACTCTTTTCCTAATGAAACTAATAGTAAACAA
ACATTTACTATATGTCCAAAATGAGAATATCAAAGATTCTCATGTCTATT
TCTGAATTGGCTTTTAGAATGAGAAAAGGAAAATTAAAGTTTGGTAGTCT
TGAAATAGACTCATAACATGACTCTGAAACCTTCTATTTTTTTTATCCCT
TCTAAAATTCAGCTCGCAAATTTCTTCAAACGTATTTAACATGCAAAAGC
AAAATTCTACTTAAGTTTTTATATATATCATTATGTTAAAGTCTATTTTT
TTTTTTATTTTTTTCAGTGTTGTTCCCTTTCATTCTGCATGTTAAAATTT
CAAATATAATTTTTAGTTTCTTTTCATTTTGTTGTACTATTTTTTTTTAT
TACCAATTATATTCCATCACTTTTGTTGTATAGTTTAAATCCTCTGTTTT
AAATTATAGTTATTGCAATTTTTTTGCTTTAATCTACTTGTATAACTTTC
TACACCAAATTTGTTGTCTCATGGACCGTGTTACTCAATATACCACTACT
TTATGATTAATTAAAAAAATATATTAAAATTAAAAAATTAATAATTAATT
ATTTTTCTAACTAATTACAACTATTAGTATATAATTTATGCAACTACTCC
CATAACTTCTAGATGTTGTTAGTTTCACTTTAAATCTATCAAATTTTTCC
TTCCAAATAGGGAGCGCTTTTCACATTTACGTCCAGGTTCAATGAACCCT
ATTCAATACTTTCGTCCTTTTCATTCATTTATTACTTCAATTCCACGCCA
GCAAATACTCCCTTCTAAACCCGTCCAAGTTCATTGTATCTCTATATTAT
TCACACAATCATTCATTTATCTAATTCATATCTCATCAATAGATTTATTA
GTATAATATTATCCATGATTAATATATTATTTATTATTATTTTATTTAAT
AATAAAAAATAAATTATACACTATTAATATATATAATATATATATATATC
CTTTTTCCAACATAGACAATGTTGACACCAAAGCAATGAATGAAATCTAT
AAGATATCTATTTTGGTAAATTGAATTATTACATCATTTAATGTATGAAA
AAAGGCACGTGACAAGTTGAATAGGTGTCTCCTTCTTACACCATAAATAA
CAACCTTTTCAATCTCAAATTTCTCACACCATAACCTGAGTTTTACAAAG
AGAGAAACAATCCTAACCCTAATTTCTAATAGCTAAACCCTAAATCGTTT
AGCATTATTCATCTCGTTGTTTCTCTCTTCTGCGCTTTCACCTTCGTATT
TTCATCCTCGGGAAAATTTCAGCGTTTAAATGTAACATTTCTTTCCCCAT
TTTTTTACTTTCCCCCTTTTCGTTATATTAGAAAAATTGGTTTTTTAATT
ATATTGTTATTTATATGATCATGTAAATTTGGTAGAAGCATTTCATTGAT
AGTGTGATATTTTTTGTTGTGAAGTCATACAACTATGGTGTTCTGGGTTT
TTGGCTATGGTTCATTGGTGTGGAACCCAGGATTTGAGTATGATGAGAAA
ATTGTTGGCTTCATCAAGGACTATAGACGCGTATTTGATTTAGGTAAATG
TTCTTTTTTTTTACATGCTGGTGAATTTGTTTATTGTATGCATACCATTG
ATTGAGTTTGCATAGCTTTTACAAATGCTTAAAGATTCGATTTTTATTTG
TATTTTGCAGCTTGCATTGATCATCGAGGAACTCCTGAACACCCGGCAAG
GACTTGCACATTAGAGGAGAAAGAAGGCGCACTTTGCGTAAGGCCTCATA
TGTTATTATTTCTATTCAATGTGGCATAGTTAGTTTATATGAATAAATTG
GACATTTCTAGTGTTAGTGTATGATAGTATGTTGTTTTTTGTTCTTATAA
TTTCTTCGATCATATTGCAGTGGGGTGCTGCTTATTGTTTTGGAGGAGGC
CCTGAAAAGGAAAAATTGGCTATGCAGGTAAAATATTTAGCACTAGAAAG
TTTCCATAGCTAGCTCTATAACCTGGATTCCGACGTGTAATATTATTTTG
CTATTTATATCCATGAGTGTTGATTAATTTAATCACTAAATTTGGTTCTT
TTATATCCAAATTCCCTCAATCACAATTCTACATTGTCTCAGTTTTGAAG
TCAATGAGTAATGGGCCATTTATGTGTGGTATTTAGTTAGTGATTGCGAT
CGTTCGATTTGCTGAGTACTTCTTAAATTTTTTAGGCTGGTTTATGTACA
AGCTTCCTTTCATCAATTATCCCAATGTTAGTGTTGGTCTCAAATTTTCA
CTCCTTTTTGTTTTGTAGTATTTAGAGAGACGGGAATGTGAATATGATCA
AAAGACTCTTGTAAGCTTCTACAAGGTGAGTTACCTGTAATCAATTTGTT
TTTTTATTACTTGTAAGTGCTTGTCATTTAGTCTTTGATAATTATTTATT
TCTCCTTAATGGTGATCTTTCTTTGCTTTTAGGAAGAAGATTCTCTGAAC
CCTGTTTTAACTGGAGTCATTGTGTAAGTTATATTACATATATTGTCTTC
CCTATTATATATTTTCGAAGGTCCCTAATTTTAGCTTATTGATCCTGCAT
TCCTGCTATCTAATTACTCATCTAAAAAAGATGTCGAAAAGTGCAAATAA
AATTTTCTCAGGTTTTAATGATAATAAATAAAAATGTTTCGAAATTGCAT
ACTAGGTTTTCTTTTAAGTTTGCTAACATAAGTTATGTCAATCTATACAG
ATTCACATCTACTGCAGACAAAGCAAACAAATACTACCTGGGACCTGCCC
CACTGGAAGACATGGCAAGGTATACGATTGCTCAATTACAGTCACCCATC
TCTCTTACAACTTTTTTGTTTTGTTTTTGAAACTTTGTTCTGTCCTTTGA
TTCCTCTAACTTGTGCTTATCTATTCAGACAAATAGCAACTGCTCATGGC
CCTTGTGGAAACAATAGAGATTATCTATTCCTGCTTGAAAAGGCCATGCA
TGATATTGGTAAGCTATCTATCTGTACCATTACAGTAATAGTTTATGATT
CTCTCTTCAAAATTATGAACTTTGTTGACACAAAAACTGACGAGTTGAGA
GGGTTTGATCTTTGATGTGTAGGCCATGAAGATAACTATGTGATAGAGCT
TGCGAATGAAGTGAGAAAAGAACTTGGAATAGTGAATATAGTCCCAAAAG
ACAAGAAGTTGGTTGCACACCCTACTCATGTGCCTATCCCAACCCTTCAA
CTGCACCCAATACCTATTACTTCGGATAGTTAA

protein sequence of rna-TanjilR_07928_La_Tanjil_v1.0

>rna-TanjilR_07928_La_Tanjil_v1.0 ID=rna-TanjilR_07928_La_Tanjil_v1.0; Name=rna-TanjilR_07928_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=158bp
MSLMWGAAYCFGGGPEKEKLAMQYLERRECEYDQKTLVSFYKEEDSLNPV
LTGVIVFTSTADKANKYYLGPAPLEDMARQIATAHGPCGNNRDYLFLLEK
AMHDIGHEDNYVIELANEVRKELGIVNIVPKDKKLVAHPTHVPIPTLQLH
PIPITSDS

mRNA from alignment at Chr_LG15-CM007375.1:19025541..19028873-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-TanjilR_07928_La_Tanjil_v1.0 ID=rna-TanjilR_07928_La_Tanjil_v1.0; Name=rna-TanjilR_07928; organism=Lupinus angustifolius; type=mRNA; length=3333bp; location=Sequence derived from: Chr_LG15-CM007375.1:19025541..19028873- (Lupinus angustifolius
ATGTCTTTGATGGTATGTTATTTTCTTTACAGATTTACCTTCTTTGCAAT
TGTAGCCTTCTTATCAACACTCTTTTCCTAATGAAACTAATAGTAAACAA
ACATTTACTATATGTCCAAAATGAGAATATCAAAGATTCTCATGTCTATT
TCTGAATTGGCTTTTAGAATGAGAAAAGGAAAATTAAAGTTTGGTAGTCT
TGAAATAGACTCATAACATGACTCTGAAACCTTCTATTTTTTTTATCCCT
TCTAAAATTCAGCTCGCAAATTTCTTCAAACGTATTTAACATGCAAAAGC
AAAATTCTACTTAAGTTTTTATATATATCATTATGTTAAAGTCTATTTTT
TTTTTTATTTTTTTCAGTGTTGTTCCCTTTCATTCTGCATGTTAAAATTT
CAAATATAATTTTTAGTTTCTTTTCATTTTGTTGTACTATTTTTTTTTAT
TACCAATTATATTCCATCACTTTTGTTGTATAGTTTAAATCCTCTGTTTT
AAATTATAGTTATTGCAATTTTTTTGCTTTAATCTACTTGTATAACTTTC
TACACCAAATTTGTTGTCTCATGGACCGTGTTACTCAATATACCACTACT
TTATGATTAATTAAAAAAATATATTAAAATTAAAAAATTAATAATTAATT
ATTTTTCTAACTAATTACAACTATTAGTATATAATTTATGCAACTACTCC
CATAACTTCTAGATGTTGTTAGTTTCACTTTAAATCTATCAAATTTTTCC
TTCCAAATAGGGAGCGCTTTTCACATTTACGTCCAGGTTCAATGAACCCT
ATTCAATACTTTCGTCCTTTTCATTCATTTATTACTTCAATTCCACGCCA
GCAAATACTCCCTTCTAAACCCGTCCAAGTTCATTGTATCTCTATATTAT
TCACACAATCATTCATTTATCTAATTCATATCTCATCAATAGATTTATTA
GTATAATATTATCCATGATTAATATATTATTTATTATTATTTTATTTAAT
AATAAAAAATAAATTATACACTATTAATATATATAATATATATATATATC
CTTTTTCCAACATAGACAATGTTGACACCAAAGCAATGAATGAAATCTAT
AAGATATCTATTTTGGTAAATTGAATTATTACATCATTTAATGTATGAAA
AAAGGCACGTGACAAGTTGAATAGGTGTCTCCTTCTTACACCATAAATAA
CAACCTTTTCAATCTCAAATTTCTCACACCATAACCTGAGTTTTACAAAG
AGAGAAACAATCCTAACCCTAATTTCTAATAGCTAAACCCTAAATCGTTT
AGCATTATTCATCTCGTTGTTTCTCTCTTCTGCGCTTTCACCTTCGTATT
TTCATCCTCGGGAAAATTTCAGCGTTTAAATGTAACATTTCTTTCCCCAT
TTTTTTACTTTCCCCCTTTTCGTTATATTAGAAAAATTGGTTTTTTAATT
ATATTGTTATTTATATGATCATGTAAATTTGGTAGAAGCATTTCATTGAT
AGTGTGATATTTTTTGTTGTGAAGTCATACAACTATGGTGTTCTGGGTTT
TTGGCTATGGTTCATTGGTGTGGAACCCAGGATTTGAGTATGATGAGAAA
ATTGTTGGCTTCATCAAGGACTATAGACGCGTATTTGATTTAGGTAAATG
TTCTTTTTTTTTACATGCTGGTGAATTTGTTTATTGTATGCATACCATTG
ATTGAGTTTGCATAGCTTTTACAAATGCTTAAAGATTCGATTTTTATTTG
TATTTTGCAGCTTGCATTGATCATCGAGGAACTCCTGAACACCCGGCAAG
GACTTGCACATTAGAGGAGAAAGAAGGCGCACTTTGCGTAAGGCCTCATA
TGTTATTATTTCTATTCAATGTGGCATAGTTAGTTTATATGAATAAATTG
GACATTTCTAGTGTTAGTGTATGATAGTATGTTGTTTTTTGTTCTTATAA
TTTCTTCGATCATATTGCAGTGGGGTGCTGCTTATTGTTTTGGAGGAGGC
CCTGAAAAGGAAAAATTGGCTATGCAGGTAAAATATTTAGCACTAGAAAG
TTTCCATAGCTAGCTCTATAACCTGGATTCCGACGTGTAATATTATTTTG
CTATTTATATCCATGAGTGTTGATTAATTTAATCACTAAATTTGGTTCTT
TTATATCCAAATTCCCTCAATCACAATTCTACATTGTCTCAGTTTTGAAG
TCAATGAGTAATGGGCCATTTATGTGTGGTATTTAGTTAGTGATTGCGAT
CGTTCGATTTGCTGAGTACTTCTTAAATTTTTTAGGCTGGTTTATGTACA
AGCTTCCTTTCATCAATTATCCCAATGTTAGTGTTGGTCTCAAATTTTCA
CTCCTTTTTGTTTTGTAGTATTTAGAGAGACGGGAATGTGAATATGATCA
AAAGACTCTTGTAAGCTTCTACAAGGTGAGTTACCTGTAATCAATTTGTT
TTTTTATTACTTGTAAGTGCTTGTCATTTAGTCTTTGATAATTATTTATT
TCTCCTTAATGGTGATCTTTCTTTGCTTTTAGGAAGAAGATTCTCTGAAC
CCTGTTTTAACTGGAGTCATTGTGTAAGTTATATTACATATATTGTCTTC
CCTATTATATATTTTCGAAGGTCCCTAATTTTAGCTTATTGATCCTGCAT
TCCTGCTATCTAATTACTCATCTAAAAAAGATGTCGAAAAGTGCAAATAA
AATTTTCTCAGGTTTTAATGATAATAAATAAAAATGTTTCGAAATTGCAT
ACTAGGTTTTCTTTTAAGTTTGCTAACATAAGTTATGTCAATCTATACAG
ATTCACATCTACTGCAGACAAAGCAAACAAATACTACCTGGGACCTGCCC
CACTGGAAGACATGGCAAGGTATACGATTGCTCAATTACAGTCACCCATC
TCTCTTACAACTTTTTTGTTTTGTTTTTGAAACTTTGTTCTGTCCTTTGA
TTCCTCTAACTTGTGCTTATCTATTCAGACAAATAGCAACTGCTCATGGC
CCTTGTGGAAACAATAGAGATTATCTATTCCTGCTTGAAAAGGCCATGCA
TGATATTGGTAAGCTATCTATCTGTACCATTACAGTAATAGTTTATGATT
CTCTCTTCAAAATTATGAACTTTGTTGACACAAAAACTGACGAGTTGAGA
GGGTTTGATCTTTGATGTGTAGGCCATGAAGATAACTATGTGATAGAGCT
TGCGAATGAAGTGAGAAAAGAACTTGGAATAGTGAATATAGTCCCAAAAG
ACAAGAAGTTGGTTGCACACCCTACTCATGTGCCTATCCCAACCCTTCAA
CTGCACCCAATACCTATTACTTCGGATAGTTAA

Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:19025541..19028873-

>rna-TanjilR_07928_La_Tanjil_v1.0 ID=rna-TanjilR_07928_La_Tanjil_v1.0; Name=rna-TanjilR_07928; organism=Lupinus angustifolius; type=CDS; length=477bp; location=Sequence derived from: Chr_LG15-CM007375.1:19025541..19028873- (Lupinus angustifolius
ATGTCTTTGATGTGGGGTGCTGCTTATTGTTTTGGAGGAGGCCCTGAAAA
GGAAAAATTGGCTATGCAGTATTTAGAGAGACGGGAATGTGAATATGATC
AAAAGACTCTTGTAAGCTTCTACAAGGAAGAAGATTCTCTGAACCCTGTT
TTAACTGGAGTCATTGTATTCACATCTACTGCAGACAAAGCAAACAAATA
CTACCTGGGACCTGCCCCACTGGAAGACATGGCAAGACAAATAGCAACTG
CTCATGGCCCTTGTGGAAACAATAGAGATTATCTATTCCTGCTTGAAAAG
GCCATGCATGATATTGGCCATGAAGATAACTATGTGATAGAGCTTGCGAA
TGAAGTGAGAAAAGAACTTGGAATAGTGAATATAGTCCCAAAAGACAAGA
AGTTGGTTGCACACCCTACTCATGTGCCTATCCCAACCCTTCAACTGCAC
CCAATACCTATTACTTCGGATAGTTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006840	ChaC

Vocabulary: **Molecular Function**
Term	Definition
GO:0003839	gamma-glutamylcyclotransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006751	glutathione catabolic process

Search form

rna-TanjilR_07928