rna-TanjilR_07928

Transcript Overview
Namerna-TanjilR_07928
Unique Namerna-TanjilR_07928_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length3333
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG15-CM007375.1supercontigChr_LG15-CM007375.1:19025541..19028873 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL262Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR300Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR303Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR308Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0419Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0420Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0376Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0381Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0383Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0463Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0490Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0450Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0459Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0326Pisum sativum Cameor genome v1aPisum sativum
anpsR0330Pisum sativum Cameor genome v1aPisum sativum
anpsR0349Pisum sativum Cameor genome v1aPisum sativum
anpvR0406Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0448Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0363Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0370Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0422Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0447Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0372Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0394Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0379Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0389Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0379Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0391Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0357Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0375Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0330Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0351Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0420Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0436Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0335Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0342Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0396Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0418Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0368Cicer arietinum
ancarR0383Cicer arietinum
anccaR0336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0357Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0414Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0423Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0406Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0407Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0416Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0423Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0424Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0432Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0431Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anpvfR0420Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0343Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR0351Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0463Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.009G103300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_009362Cajanus cajan Asha genome v1.0Cajanus cajan
Vum_02G00762.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_027334107.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
evm.model.Chr09.1711.1.62113178Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.2g190600.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va04G061830.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun09g199100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vfaba.Hedin2.R1.3g199320.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_014644324.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg35873.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigst.02G071300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
PvulFLAVERTChr09.719Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
XM_058872598.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan04g208100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_11005Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
XM_058924674.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cc_v2.0_06859.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Tiffany.R1.3g164120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigan.02G092900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun09g199100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_12538Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_32957Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_07928gene-TanjilG_07928_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_07928rna-TanjilR_07928_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_07928_La_Tanjil_v1.0rna-TanjilR_07928_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19028862..19028873rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19028862..19028873Lupinus angustifoliusCDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026847..19026903rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026847..19026903Lupinus angustifoliusCDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026449..19026505rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026449..19026505Lupinus angustifoliusCDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026301..19026341rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026301..19026341Lupinus angustifoliusCDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026005..19026073rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026005..19026073Lupinus angustifoliusCDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025816..19025895rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025816..19025895Lupinus angustifoliusCDS
rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025541..19025701rna-TanjilR_07928_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025541..19025701Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19028862..19028873rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19028862..19028873Lupinus angustifoliusexon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026847..19026903rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026847..19026903Lupinus angustifoliusexon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026449..19026505rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026449..19026505Lupinus angustifoliusexon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026301..19026341rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026301..19026341Lupinus angustifoliusexon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026005..19026073rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19026005..19026073Lupinus angustifoliusexon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025816..19025895rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025816..19025895Lupinus angustifoliusexon
rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025541..19025701rna-TanjilR_07928_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19025541..19025701Lupinus angustifoliusexon


Homology
[Close]
BLAST of rna-TanjilR_07928 vs. DB:Swiss
Match: GCT21_ARATH (Gamma-glutamylcyclotransferase 2-1 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.547e-24
Identity = 50/101 (49.50%), Postives = 59/101 (58.42%), Query Frame = 2 
Query: 1535 MVFWVFGYGSLVWNPGFEYDEKIVGFIKDYRRVFDLGKCSFFLHAGEFVYCMHTID*VCIAFTNA*RFDFYLYFAACIDHRGTPEHPARTCTLEEKEGALC 1837
            MV WVFGYGSL+WNPGF++DEK++G+IKDY+RVFDL                                       ACIDHRGTPEHPARTCTLE+  GA+C
Sbjct:    1 MVLWVFGYGSLIWNPGFDFDEKLIGYIKDYKRVFDL---------------------------------------ACIDHRGTPEHPARTCTLEQSTGAIC 62

HSP 2 Score: 65.4698 bits (158), Expect = 1.829e-10
Identity = 46/122 (37.70%), Postives = 57/122 (46.72%), Query Frame = 1 
Query: 2947 LIPLTCAYLFRQIATAHGPCGNNRDYLFLLEKAMHDIGKLSICTITVIVYDSLFKIMNFVDTKTDELRGFDL*CVGHEDNYVIELANEVRKELGIVNIVPKDKKLVAHP--THVPIPTLQLH 3306
            L P     + RQIATA GPCGNNR+YLF LEKAM DI                                       HE+ YVIELANEVRK+L +    P++ K +  P  +HV + + Q H
Sbjct:  128 LGPAPLEEMARQIATASGPCGNNREYLFKLEKAMFDI--------------------------------------EHEEEYVIELANEVRKQLDL----PEEVKALLKPIVSHVSVKS-QAH 206
[Close]
BLAST of rna-TanjilR_07928 vs. DB:Swiss
Match: GCT22_ARATH (Gamma-glutamylcyclotransferase 2-2 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.933e-23
Identity = 52/101 (51.49%), Postives = 57/101 (56.44%), Query Frame = 2 
Query: 1535 MVFWVFGYGSLVWNPGFEYDEKIVGFIKDYRRVFDLGKCSFFLHAGEFVYCMHTID*VCIAFTNA*RFDFYLYFAACIDHRGTPEHPARTCTLEEKEGALC 1837
            MV WVFGYGSLVWNPGF YDEK++GFIK Y+RVFDL                                       ACIDHRGTPEHPARTCTLE+ E A+C
Sbjct:    1 MVMWVFGYGSLVWNPGFHYDEKVLGFIKGYKRVFDL---------------------------------------ACIDHRGTPEHPARTCTLEKAEEAIC 62

HSP 2 Score: 72.4034 bits (176), Expect = 1.146e-12
Identity = 52/136 (38.24%), Postives = 64/136 (47.06%), Query Frame = 1 
Query: 2947 LIPLTCAYLFRQIATAHGPCGNNRDYLFLLEKAMHDIGKLSICTITVIVYDSLFKIMNFVDTKTDELRGFDL*CVGHEDNYVIELANEVRK---ELGIVNIVP-KDKKL--VAHPTHVPIPT----LQLHPIPITS 3324
            L P     + RQIATA+GPCGNNRDYLFLLEKAMHDI                                      GHE++YVIELANEVRK   E     + P K+ +   VA+ +   +PT    L  HP  + +
Sbjct:  128 LGPAPLEDMARQIATANGPCGNNRDYLFLLEKAMHDI--------------------------------------GHEEDYVIELANEVRKVLAESSTKKVTPVKESRASRVANKSKNNVPTAHQILPHHPEAVAT 225
[Close]
BLAST of rna-TanjilR_07928 vs. DB:Swiss
Match: GCT23_ARATH (Gamma-glutamylcyclotransferase 2-3 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;3 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.352e-11
Identity = 37/102 (36.27%), Postives = 42/102 (41.18%), Query Frame = 2 
Query: 1535 MVFWVFGYGSLVWNPGFEYDEKIVGFIKDYRRVFDLGKCSFFLHAGEFVYCMHTID*VCIAFTNA*RFDFYLYFAACIDHRGTPEHPARTCTLEEKEGALCV 1840
            M  WVFGYGSL+W  GF +DE + GFIK YRRVF  G                                         DHRGTP+ P RT TLE     +C 
Sbjct:    1 MAMWVFGYGSLIWKTGFPFDESLPGFIKGYRRVFHQG---------------------------------------STDHRGTPDFPGRTVTLEAAHEEVCC 63
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_07928 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
GCT21_ARATH2.547e-2449.50Gamma-glutamylcyclotransferase 2-1 OS=Arabidopsis ... [more]
GCT22_ARATH1.933e-2351.49Gamma-glutamylcyclotransferase 2-2 OS=Arabidopsis ... [more]
GCT23_ARATH9.352e-1136.27Gamma-glutamylcyclotransferase 2-3 OS=Arabidopsis ... [more]
back to top
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006840Glutathione-specific gamma-glutamylcyclotransferasePFAMPF04752ChaCcoord: 4..122
e-value: 1.6E-20
score: 73.9

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_07928_La_Tanjil_v1.0 ID=rna-TanjilR_07928_La_Tanjil_v1.0; Name=rna-TanjilR_07928; organism=Lupinus angustifolius; type=mRNA; length=3333bp
ATGTCTTTGATGGTATGTTATTTTCTTTACAGATTTACCTTCTTTGCAAT
TGTAGCCTTCTTATCAACACTCTTTTCCTAATGAAACTAATAGTAAACAA
ACATTTACTATATGTCCAAAATGAGAATATCAAAGATTCTCATGTCTATT
TCTGAATTGGCTTTTAGAATGAGAAAAGGAAAATTAAAGTTTGGTAGTCT
TGAAATAGACTCATAACATGACTCTGAAACCTTCTATTTTTTTTATCCCT
TCTAAAATTCAGCTCGCAAATTTCTTCAAACGTATTTAACATGCAAAAGC
AAAATTCTACTTAAGTTTTTATATATATCATTATGTTAAAGTCTATTTTT
TTTTTTATTTTTTTCAGTGTTGTTCCCTTTCATTCTGCATGTTAAAATTT
CAAATATAATTTTTAGTTTCTTTTCATTTTGTTGTACTATTTTTTTTTAT
TACCAATTATATTCCATCACTTTTGTTGTATAGTTTAAATCCTCTGTTTT
AAATTATAGTTATTGCAATTTTTTTGCTTTAATCTACTTGTATAACTTTC
TACACCAAATTTGTTGTCTCATGGACCGTGTTACTCAATATACCACTACT
TTATGATTAATTAAAAAAATATATTAAAATTAAAAAATTAATAATTAATT
ATTTTTCTAACTAATTACAACTATTAGTATATAATTTATGCAACTACTCC
CATAACTTCTAGATGTTGTTAGTTTCACTTTAAATCTATCAAATTTTTCC
TTCCAAATAGGGAGCGCTTTTCACATTTACGTCCAGGTTCAATGAACCCT
ATTCAATACTTTCGTCCTTTTCATTCATTTATTACTTCAATTCCACGCCA
GCAAATACTCCCTTCTAAACCCGTCCAAGTTCATTGTATCTCTATATTAT
TCACACAATCATTCATTTATCTAATTCATATCTCATCAATAGATTTATTA
GTATAATATTATCCATGATTAATATATTATTTATTATTATTTTATTTAAT
AATAAAAAATAAATTATACACTATTAATATATATAATATATATATATATC
CTTTTTCCAACATAGACAATGTTGACACCAAAGCAATGAATGAAATCTAT
AAGATATCTATTTTGGTAAATTGAATTATTACATCATTTAATGTATGAAA
AAAGGCACGTGACAAGTTGAATAGGTGTCTCCTTCTTACACCATAAATAA
CAACCTTTTCAATCTCAAATTTCTCACACCATAACCTGAGTTTTACAAAG
AGAGAAACAATCCTAACCCTAATTTCTAATAGCTAAACCCTAAATCGTTT
AGCATTATTCATCTCGTTGTTTCTCTCTTCTGCGCTTTCACCTTCGTATT
TTCATCCTCGGGAAAATTTCAGCGTTTAAATGTAACATTTCTTTCCCCAT
TTTTTTACTTTCCCCCTTTTCGTTATATTAGAAAAATTGGTTTTTTAATT
ATATTGTTATTTATATGATCATGTAAATTTGGTAGAAGCATTTCATTGAT
AGTGTGATATTTTTTGTTGTGAAGTCATACAACTATGGTGTTCTGGGTTT
TTGGCTATGGTTCATTGGTGTGGAACCCAGGATTTGAGTATGATGAGAAA
ATTGTTGGCTTCATCAAGGACTATAGACGCGTATTTGATTTAGGTAAATG
TTCTTTTTTTTTACATGCTGGTGAATTTGTTTATTGTATGCATACCATTG
ATTGAGTTTGCATAGCTTTTACAAATGCTTAAAGATTCGATTTTTATTTG
TATTTTGCAGCTTGCATTGATCATCGAGGAACTCCTGAACACCCGGCAAG
GACTTGCACATTAGAGGAGAAAGAAGGCGCACTTTGCGTAAGGCCTCATA
TGTTATTATTTCTATTCAATGTGGCATAGTTAGTTTATATGAATAAATTG
GACATTTCTAGTGTTAGTGTATGATAGTATGTTGTTTTTTGTTCTTATAA
TTTCTTCGATCATATTGCAGTGGGGTGCTGCTTATTGTTTTGGAGGAGGC
CCTGAAAAGGAAAAATTGGCTATGCAGGTAAAATATTTAGCACTAGAAAG
TTTCCATAGCTAGCTCTATAACCTGGATTCCGACGTGTAATATTATTTTG
CTATTTATATCCATGAGTGTTGATTAATTTAATCACTAAATTTGGTTCTT
TTATATCCAAATTCCCTCAATCACAATTCTACATTGTCTCAGTTTTGAAG
TCAATGAGTAATGGGCCATTTATGTGTGGTATTTAGTTAGTGATTGCGAT
CGTTCGATTTGCTGAGTACTTCTTAAATTTTTTAGGCTGGTTTATGTACA
AGCTTCCTTTCATCAATTATCCCAATGTTAGTGTTGGTCTCAAATTTTCA
CTCCTTTTTGTTTTGTAGTATTTAGAGAGACGGGAATGTGAATATGATCA
AAAGACTCTTGTAAGCTTCTACAAGGTGAGTTACCTGTAATCAATTTGTT
TTTTTATTACTTGTAAGTGCTTGTCATTTAGTCTTTGATAATTATTTATT
TCTCCTTAATGGTGATCTTTCTTTGCTTTTAGGAAGAAGATTCTCTGAAC
CCTGTTTTAACTGGAGTCATTGTGTAAGTTATATTACATATATTGTCTTC
CCTATTATATATTTTCGAAGGTCCCTAATTTTAGCTTATTGATCCTGCAT
TCCTGCTATCTAATTACTCATCTAAAAAAGATGTCGAAAAGTGCAAATAA
AATTTTCTCAGGTTTTAATGATAATAAATAAAAATGTTTCGAAATTGCAT
ACTAGGTTTTCTTTTAAGTTTGCTAACATAAGTTATGTCAATCTATACAG
ATTCACATCTACTGCAGACAAAGCAAACAAATACTACCTGGGACCTGCCC
CACTGGAAGACATGGCAAGGTATACGATTGCTCAATTACAGTCACCCATC
TCTCTTACAACTTTTTTGTTTTGTTTTTGAAACTTTGTTCTGTCCTTTGA
TTCCTCTAACTTGTGCTTATCTATTCAGACAAATAGCAACTGCTCATGGC
CCTTGTGGAAACAATAGAGATTATCTATTCCTGCTTGAAAAGGCCATGCA
TGATATTGGTAAGCTATCTATCTGTACCATTACAGTAATAGTTTATGATT
CTCTCTTCAAAATTATGAACTTTGTTGACACAAAAACTGACGAGTTGAGA
GGGTTTGATCTTTGATGTGTAGGCCATGAAGATAACTATGTGATAGAGCT
TGCGAATGAAGTGAGAAAAGAACTTGGAATAGTGAATATAGTCCCAAAAG
ACAAGAAGTTGGTTGCACACCCTACTCATGTGCCTATCCCAACCCTTCAA
CTGCACCCAATACCTATTACTTCGGATAGTTAA
back to top

protein sequence of rna-TanjilR_07928_La_Tanjil_v1.0

>rna-TanjilR_07928_La_Tanjil_v1.0 ID=rna-TanjilR_07928_La_Tanjil_v1.0; Name=rna-TanjilR_07928_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=158bp
MSLMWGAAYCFGGGPEKEKLAMQYLERRECEYDQKTLVSFYKEEDSLNPV
LTGVIVFTSTADKANKYYLGPAPLEDMARQIATAHGPCGNNRDYLFLLEK
AMHDIGHEDNYVIELANEVRKELGIVNIVPKDKKLVAHPTHVPIPTLQLH
PIPITSDS
back to top

mRNA from alignment at Chr_LG15-CM007375.1:19025541..19028873-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_07928_La_Tanjil_v1.0 ID=rna-TanjilR_07928_La_Tanjil_v1.0; Name=rna-TanjilR_07928; organism=Lupinus angustifolius; type=mRNA; length=3333bp; location=Sequence derived from: Chr_LG15-CM007375.1:19025541..19028873- (Lupinus angustifolius
ATGTCTTTGATGGTATGTTATTTTCTTTACAGATTTACCTTCTTTGCAAT
TGTAGCCTTCTTATCAACACTCTTTTCCTAATGAAACTAATAGTAAACAA
ACATTTACTATATGTCCAAAATGAGAATATCAAAGATTCTCATGTCTATT
TCTGAATTGGCTTTTAGAATGAGAAAAGGAAAATTAAAGTTTGGTAGTCT
TGAAATAGACTCATAACATGACTCTGAAACCTTCTATTTTTTTTATCCCT
TCTAAAATTCAGCTCGCAAATTTCTTCAAACGTATTTAACATGCAAAAGC
AAAATTCTACTTAAGTTTTTATATATATCATTATGTTAAAGTCTATTTTT
TTTTTTATTTTTTTCAGTGTTGTTCCCTTTCATTCTGCATGTTAAAATTT
CAAATATAATTTTTAGTTTCTTTTCATTTTGTTGTACTATTTTTTTTTAT
TACCAATTATATTCCATCACTTTTGTTGTATAGTTTAAATCCTCTGTTTT
AAATTATAGTTATTGCAATTTTTTTGCTTTAATCTACTTGTATAACTTTC
TACACCAAATTTGTTGTCTCATGGACCGTGTTACTCAATATACCACTACT
TTATGATTAATTAAAAAAATATATTAAAATTAAAAAATTAATAATTAATT
ATTTTTCTAACTAATTACAACTATTAGTATATAATTTATGCAACTACTCC
CATAACTTCTAGATGTTGTTAGTTTCACTTTAAATCTATCAAATTTTTCC
TTCCAAATAGGGAGCGCTTTTCACATTTACGTCCAGGTTCAATGAACCCT
ATTCAATACTTTCGTCCTTTTCATTCATTTATTACTTCAATTCCACGCCA
GCAAATACTCCCTTCTAAACCCGTCCAAGTTCATTGTATCTCTATATTAT
TCACACAATCATTCATTTATCTAATTCATATCTCATCAATAGATTTATTA
GTATAATATTATCCATGATTAATATATTATTTATTATTATTTTATTTAAT
AATAAAAAATAAATTATACACTATTAATATATATAATATATATATATATC
CTTTTTCCAACATAGACAATGTTGACACCAAAGCAATGAATGAAATCTAT
AAGATATCTATTTTGGTAAATTGAATTATTACATCATTTAATGTATGAAA
AAAGGCACGTGACAAGTTGAATAGGTGTCTCCTTCTTACACCATAAATAA
CAACCTTTTCAATCTCAAATTTCTCACACCATAACCTGAGTTTTACAAAG
AGAGAAACAATCCTAACCCTAATTTCTAATAGCTAAACCCTAAATCGTTT
AGCATTATTCATCTCGTTGTTTCTCTCTTCTGCGCTTTCACCTTCGTATT
TTCATCCTCGGGAAAATTTCAGCGTTTAAATGTAACATTTCTTTCCCCAT
TTTTTTACTTTCCCCCTTTTCGTTATATTAGAAAAATTGGTTTTTTAATT
ATATTGTTATTTATATGATCATGTAAATTTGGTAGAAGCATTTCATTGAT
AGTGTGATATTTTTTGTTGTGAAGTCATACAACTATGGTGTTCTGGGTTT
TTGGCTATGGTTCATTGGTGTGGAACCCAGGATTTGAGTATGATGAGAAA
ATTGTTGGCTTCATCAAGGACTATAGACGCGTATTTGATTTAGGTAAATG
TTCTTTTTTTTTACATGCTGGTGAATTTGTTTATTGTATGCATACCATTG
ATTGAGTTTGCATAGCTTTTACAAATGCTTAAAGATTCGATTTTTATTTG
TATTTTGCAGCTTGCATTGATCATCGAGGAACTCCTGAACACCCGGCAAG
GACTTGCACATTAGAGGAGAAAGAAGGCGCACTTTGCGTAAGGCCTCATA
TGTTATTATTTCTATTCAATGTGGCATAGTTAGTTTATATGAATAAATTG
GACATTTCTAGTGTTAGTGTATGATAGTATGTTGTTTTTTGTTCTTATAA
TTTCTTCGATCATATTGCAGTGGGGTGCTGCTTATTGTTTTGGAGGAGGC
CCTGAAAAGGAAAAATTGGCTATGCAGGTAAAATATTTAGCACTAGAAAG
TTTCCATAGCTAGCTCTATAACCTGGATTCCGACGTGTAATATTATTTTG
CTATTTATATCCATGAGTGTTGATTAATTTAATCACTAAATTTGGTTCTT
TTATATCCAAATTCCCTCAATCACAATTCTACATTGTCTCAGTTTTGAAG
TCAATGAGTAATGGGCCATTTATGTGTGGTATTTAGTTAGTGATTGCGAT
CGTTCGATTTGCTGAGTACTTCTTAAATTTTTTAGGCTGGTTTATGTACA
AGCTTCCTTTCATCAATTATCCCAATGTTAGTGTTGGTCTCAAATTTTCA
CTCCTTTTTGTTTTGTAGTATTTAGAGAGACGGGAATGTGAATATGATCA
AAAGACTCTTGTAAGCTTCTACAAGGTGAGTTACCTGTAATCAATTTGTT
TTTTTATTACTTGTAAGTGCTTGTCATTTAGTCTTTGATAATTATTTATT
TCTCCTTAATGGTGATCTTTCTTTGCTTTTAGGAAGAAGATTCTCTGAAC
CCTGTTTTAACTGGAGTCATTGTGTAAGTTATATTACATATATTGTCTTC
CCTATTATATATTTTCGAAGGTCCCTAATTTTAGCTTATTGATCCTGCAT
TCCTGCTATCTAATTACTCATCTAAAAAAGATGTCGAAAAGTGCAAATAA
AATTTTCTCAGGTTTTAATGATAATAAATAAAAATGTTTCGAAATTGCAT
ACTAGGTTTTCTTTTAAGTTTGCTAACATAAGTTATGTCAATCTATACAG
ATTCACATCTACTGCAGACAAAGCAAACAAATACTACCTGGGACCTGCCC
CACTGGAAGACATGGCAAGGTATACGATTGCTCAATTACAGTCACCCATC
TCTCTTACAACTTTTTTGTTTTGTTTTTGAAACTTTGTTCTGTCCTTTGA
TTCCTCTAACTTGTGCTTATCTATTCAGACAAATAGCAACTGCTCATGGC
CCTTGTGGAAACAATAGAGATTATCTATTCCTGCTTGAAAAGGCCATGCA
TGATATTGGTAAGCTATCTATCTGTACCATTACAGTAATAGTTTATGATT
CTCTCTTCAAAATTATGAACTTTGTTGACACAAAAACTGACGAGTTGAGA
GGGTTTGATCTTTGATGTGTAGGCCATGAAGATAACTATGTGATAGAGCT
TGCGAATGAAGTGAGAAAAGAACTTGGAATAGTGAATATAGTCCCAAAAG
ACAAGAAGTTGGTTGCACACCCTACTCATGTGCCTATCCCAACCCTTCAA
CTGCACCCAATACCTATTACTTCGGATAGTTAA
back to top

Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:19025541..19028873-

>rna-TanjilR_07928_La_Tanjil_v1.0 ID=rna-TanjilR_07928_La_Tanjil_v1.0; Name=rna-TanjilR_07928; organism=Lupinus angustifolius; type=CDS; length=477bp; location=Sequence derived from: Chr_LG15-CM007375.1:19025541..19028873- (Lupinus angustifolius
ATGTCTTTGATGTGGGGTGCTGCTTATTGTTTTGGAGGAGGCCCTGAAAA
GGAAAAATTGGCTATGCAGTATTTAGAGAGACGGGAATGTGAATATGATC
AAAAGACTCTTGTAAGCTTCTACAAGGAAGAAGATTCTCTGAACCCTGTT
TTAACTGGAGTCATTGTATTCACATCTACTGCAGACAAAGCAAACAAATA
CTACCTGGGACCTGCCCCACTGGAAGACATGGCAAGACAAATAGCAACTG
CTCATGGCCCTTGTGGAAACAATAGAGATTATCTATTCCTGCTTGAAAAG
GCCATGCATGATATTGGCCATGAAGATAACTATGTGATAGAGCTTGCGAA
TGAAGTGAGAAAAGAACTTGGAATAGTGAATATAGTCCCAAAAGACAAGA
AGTTGGTTGCACACCCTACTCATGTGCCTATCCCAACCCTTCAACTGCAC
CCAATACCTATTACTTCGGATAGTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006840ChaC
Vocabulary: Molecular Function
TermDefinition
GO:0003839gamma-glutamylcyclotransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006751glutathione catabolic process