LR48_mrnaVigan04g236500

Transcript Overview
NameLR48_mrnaVigan04g236500
Unique NameLR48_mrnaVigan04g236500_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length1891
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_4-CM003374.1supercontigChr_4-CM003374.1:32899688..32901578 -Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR547Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR553Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasR211Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0111Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0368Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0422Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0840Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR643Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR654Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0809Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0856Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0864Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR614Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR635Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR537Pisum sativum Cameor genome v1aPisum sativum
aspsR543Pisum sativum Cameor genome v1aPisum sativum
aspsR554Pisum sativum Cameor genome v1aPisum sativum
aspsR579Pisum sativum Cameor genome v1aPisum sativum
aspvR592Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR644Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR533Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR538Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR576Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR591Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR590Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR605Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR487Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR505Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR609Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR654Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR666Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR488Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR512Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR492Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR500Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_014181Cajanus cajan Asha genome v1.0Cajanus cajan
Phvul.009G077300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun09g225600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.2g173320.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.2g139760.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_014643877.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004501738.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-KK1_009553Cajanus cajan Asha genome v1.0Cajanus cajan
jg55176.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_30264Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan04g236500gene-LR48_Vigan04g236500_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g236500LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32901576..32901578LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32901576..32901578Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32901299..32901578LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32901299..32901578Vigna angularisexon
LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32899688..32900013LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32899688..32900013Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32900014..32901298LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32900014..32901298Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS2299CDS2299_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32899688..32899690LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32899688..32899690Vigna angularisstop_codon


Homology
[Close]
BLAST of LR48_mrnaVigan04g236500 vs. DB:Swiss
Match: MYBS3_ORYSJ (Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.113e-33
Identity = 74/158 (46.84%), Postives = 101/158 (63.92%), Query Frame = 1 
Query:    7 IARKCSYCGKLGHNSRTCKSPLGHGDLKLFGVQL-DIXXXXXXXXXXXXXXXXALTNHFFSSSPSFRDENQNSDAFLLTANTLL----SRIQDTKKGVAWTEEEHKVFLLGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLRQSHNTFHKTKHS 465
            + R+CS+C   GHNSRTC     +  +K+FGV+L D S   S+++   S   SA  +    +SP+   +   + A    ++  +    S  +D KKGV WTEEEH+ FLLGLQKLGKG+WRGIS++FV +RTP QVASHAQKYF+RQS+ T  K + S
Sbjct:    1 MTRRCSHCSHNGHNSRTCP----NRGVKIFGVRLTDGSIRKSASMGNLSLLSSAAGSTSGGASPADGPDAAPTAADGYASDDFVQGSSSATRDRKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRKRRSS 154
[Close]
BLAST of LR48_mrnaVigan04g236500 vs. DB:Swiss
Match: M5162_ARATH (Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g61620 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.050e-29
Identity = 69/169 (40.83%), Postives = 96/169 (56.80%), Query Frame = 1 
Query:    7 IARKCSYCGKLGHNSRTCKSPLGHGDLKLFGVQL--------DIXXXXXXXXXXXXXXXXALTNHFFSSSP--SFRDENQNSDAFLLTANTLLSRIQDTKKGVAWTEEEHKVFLLGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLRQSHNTFHKTKHSRTLFHV 483
            +A+ CS+CG  GHN+RTC + +    +KLFGV +        ++++   S    +  +  A      S  P  +  D   +SD  + +     +   + KKG  WTEEEH+ FL+GL KLGKG+WRGI+KSFV TRTP QVASHAQKYF+R   N   K K   +LF +
Sbjct:    8 VAKTCSHCGHNGHNARTCLNGVNKASVKLFGVNISSDPIRPPEVTALRKSLSLGNLDALLANDESNGSGDPIAAVDDTGYHSDGQIHSKKGKTA--HEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRL--NVNDKRKRRASLFDI 172
[Close]
BLAST of LR48_mrnaVigan04g236500 vs. DB:Swiss
Match: KUA1_ARATH (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.623e-29
Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = 1 
Query:    7 IARKCSYCGKLGHNSRTCKSPLGHGDLKLFGVQL---DIXXXXXXXXXXXXXXXXALTNHFFSSSPS--------FRDENQNSDAFLLTANTLLSRIQDTKKGVAWTEEEHKVFLLGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLRQSHNTFHKTKHS 465
            + R+CS+C   GHNSRTC     +  +KLFGV+L    I  S+S           +  +   S++P            +   S+ F+  +++   R    KKG  WTEEEH++FLLGLQKLGKG+WRGIS+++V TRTP QVASHAQKYF+RQS+ +  K + S
Sbjct:    1 MTRRCSHCNHNGHNSRTCP----NRGVKLFGVRLTEGSIRKSASMGNLSHYTGSGSGGHGTGSNTPGSPGDVPDHVAGDGYASEDFVAGSSSSRER----KKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSS 156
[Close]
BLAST of LR48_mrnaVigan04g236500 vs. DB:Swiss
Match: MYBS2_ORYSJ (Transcription factor MYBS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.427e-24
Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 1 
Query:  259 RIQDTKKGVAWTEEEHKVFLLGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLRQSHNTFHKTKHSRTLFHV 483
            ++Q+ KKGV WTEEEHK FL GL++LGKG+WRGISK+FV +RT  QVASHAQKYFLRQ++    K K   +LF V
Sbjct:   91 KVQERKKGVPWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYFLRQTNPG--KKKRRASLFDV 163
[Close]
BLAST of LR48_mrnaVigan04g236500 vs. DB:Swiss
Match: MYBS2_ORYSI (Transcription factor MYBS2 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS2 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.427e-24
Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 1 
Query:  259 RIQDTKKGVAWTEEEHKVFLLGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLRQSHNTFHKTKHSRTLFHV 483
            ++Q+ KKGV WTEEEHK FL GL++LGKG+WRGISK+FV +RT  QVASHAQKYFLRQ++    K K   +LF V
Sbjct:   91 KVQERKKGVPWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYFLRQTNPG--KKKRRASLFDV 163
[Close]
BLAST of LR48_mrnaVigan04g236500 vs. DB:Swiss
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.032e-24
Identity = 42/53 (79.25%), Postives = 50/53 (94.34%), Query Frame = 1 
Query:  265 QDTKKGVAWTEEEHKVFLLGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYF 423
            ++ K+GV WTEEEHK+FLLGLQK+GKG+WRGIS++FVKTRTP QVASHAQKYF
Sbjct:   89 RERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 141
[Close]
BLAST of LR48_mrnaVigan04g236500 vs. DB:Swiss
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.325e-23
Identity = 42/56 (75.00%), Postives = 50/56 (89.29%), Query Frame = 1 
Query:  265 QDTKKGVAWTEEEHKVFLLGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLRQ 432
            Q+ KKGV WTEEEHK+FL+GL+K GKG+WR IS++FV TRTP QVASHAQKYF+RQ
Sbjct:  126 QERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQ 181
[Close]
BLAST of LR48_mrnaVigan04g236500 vs. DB:Swiss
Match: SRM1_ARATH (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.593e-22
Identity = 41/73 (56.16%), Postives = 57/73 (78.08%), Query Frame = 1 
Query:  265 QDTKKGVAWTEEEHKVFLLGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLRQSHNTFHKTKHSRTLFHV 483
            Q+ +KG+AWTE+EH++FLLGL K GKG+WR IS++FV TRTP QVASHAQKYF+R   N+ +K +   ++  +
Sbjct:  112 QERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL--NSMNKDRRRSSIHDI 182
[Close]
BLAST of LR48_mrnaVigan04g236500 vs. DB:Swiss
Match: MYBS1_ORYSJ (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.098e-21
Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 1 
Query:  202 RDENQNSDAFLLTANTLLSRIQDTKKGVAWTEEEHKVFLLGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLR 429
            RDE +          +     Q+ +KG+ WTEEEH++FLLGL K GKG+WR IS++FV +RTP QVASHAQKYF+R
Sbjct:  115 RDERKGGGGGYDGGKSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIR 190
[Close]
BLAST of LR48_mrnaVigan04g236500 vs. DB:Swiss
Match: MYBS1_ORYSI (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.098e-21
Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 1 
Query:  202 RDENQNSDAFLLTANTLLSRIQDTKKGVAWTEEEHKVFLLGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLR 429
            RDE +          +     Q+ +KG+ WTEEEH++FLLGL K GKG+WR IS++FV +RTP QVASHAQKYF+R
Sbjct:  115 RDERKGGGGGYDGGKSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIR 190
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan04g236500 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
MYBS3_ORYSJ5.113e-3346.84Transcription factor MYBS3 OS=Oryza sativa subsp. ... [more]
M5162_ARATH1.050e-2940.83Probable transcription factor At5g61620 OS=Arabido... [more]
KUA1_ARATH2.623e-2942.68Transcription factor KUA1 OS=Arabidopsis thaliana ... [more]
MYBS2_ORYSJ2.427e-2464.00Transcription factor MYBS2 OS=Oryza sativa subsp. ... [more]
MYBS2_ORYSI2.427e-2464.00Transcription factor MYBS2 OS=Oryza sativa subsp. ... [more]
MY1R1_SOLTU8.032e-2479.25Transcription factor MYB1R1 OS=Solanum tuberosum O... [more]
DIV_ANTMA8.325e-2375.00Transcription factor DIVARICATA OS=Antirrhinum maj... [more]
SRM1_ARATH2.593e-2256.16Transcription factor SRM1 OS=Arabidopsis thaliana ... [more]
MYBS1_ORYSJ1.098e-2153.95Transcription factor MYBS1 OS=Oryza sativa subsp. ... [more]
MYBS1_ORYSI1.098e-2153.95Transcription factor MYBS1 OS=Oryza sativa subsp. ... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 93..143
e-value: 1.0E-9
score: 48.3
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 96..140
e-value: 2.0E-11
score: 43.8
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 96..141
e-value: 7.24204E-10
score: 50.6518
NoneNo IPR availableGENE3D1.10.10.60coord: 95..146
e-value: 2.6E-15
score: 58.3
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 92..144
e-value: 1.5E-17
score: 61.6
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 89..145
score: 17.207
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 5..22
score: 8.763
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 91..145

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g236500; organism=Vigna angularis; type=mRNA; length=1891bp
ATGGGAATAGCCAGAAAATGTTCATACTGTGGCAAATTAGGTCACAATTC
AAGGACTTGTAAAAGTCCTCTCGGTCATGGAGACCTGAAGCTCTTTGGAG
TGCAGCTTGACATTTCTTCTTCTTCATCTTCTACTATTTCTTTTTCTTCA
CCTTCGTATTCTGCCTTGACCAACCACTTCTTCTCTTCATCTCCTTCTTT
TCGTGATGAAAATCAAAATTCAGATGCTTTCTTACTCACTGCCAATACCC
TCCTATCGAGAATTCAAGACACAAAAAAAGGTTATTTTTCTTTCTTCATC
TGTTATTAATTCCAGTTATTAAGGACTTTTTTTTTATTTCCATTTGTTTT
CAGGAGAAAATCGTGTGTATACATACTTCTTTGAAATCATTGTTATCAAT
TTTTAATATGTTTATTTAAGATTTTATAAAATGATAATGTTATTATCAGA
GAATGAAGTTAGCTTTGTGTGAAGTTGAAATTTGCACTCAATATTGTAAT
TTGATCACTCGTTTAGTAGAATATCACATGCTAATGCTATAAATAACTCT
TTTAATGAATTTATGGTATGCTGTAATATTATATTAGAAGGTTAATTTTA
AATATAAACCAACCTTTAATGAATAATAACTAAATATATAGTCTATTTTT
TTTACTAAAAGTCCAAAAAGAGAAATATTAATATAAGGTAAAATGAGTTA
TGTGGTTGGAAAAACATAAAGAAAACAATTAATGAAACTTTAAAATAAAA
GTAAATATTACTCTTAAAAAATGATTTTTTTACTTATTTCAGTATTTTTT
TTCTTTGAATTTGAAATTATAGTTAAGTTCAAATTTAAAATAGTAGTTCT
TCATATCTGTTTTTTTTTTTAAATTAAGTAAACTTTTTTAAAAGTAAAAA
AGGAATTTGTACTTATTTCCATTTCAGGTTATGCTCAATAATTGTACTTA
TTTCCTTTTTGAAGTAGATATTAATCACTCAAATCATTTTAATAAAGTAT
ACGTTATTTTATAGCTTTTTAAATAAATAATCACATTTTATGTTTATAAT
AAAATAACACTCACTTGCTTTATATTTTTAATAAAGTGACACATCGACAC
ATTTTATTTAAAAATATCACATTAACTAAAATTTGAATAAAAATCGAAAA
TAAAACTTCAAAAATAAAAAAAATAAATTAAAAAAAGGAAAACTACATTT
TTTTATGAATAAAATAAGAGGAGCAATATTGTTACGTTATAAAAAAAAGA
AATGAATATATATTTAAAAATTACAGACAGTACACAAAGTATTTTATTAA
AAACATAAAAGAAATAAGTTTTTATTTTAAAATTAAAAAGAGTTCGAGTA
TTATTAGTAAATAAATTTATTGAAGAAAGTAAATCACTTCTTTTTTAAAG
TTAAACAAGTGGGCCTAACTAAAAGAGTGCGACTTGACATAAACAATTTC
TGACATATCTAAAGTGAAACTATTGTATAATGTATATAGAATAAATATTG
TTTTACATAGATAAATATATTGATGGTGGTTTGTAAGAAAATGTTGTTGT
CTGTGGAAAGTTCAGGTGTGGCATGGACAGAGGAGGAACACAAGGTGTTT
CTCTTAGGGCTACAGAAGCTGGGGAAGGGAAACTGGAGAGGCATATCGAA
AAGTTTTGTCAAAACAAGAACACCTGTGCAAGTTGCAAGTCATGCACAGA
AGTATTTTCTCCGACAATCTCACAATACCTTTCACAAAACAAAACACTCT
CGTACCTTGTTCCATGTCCCTTCTTCTTCAACTTCCACTTCATCTTCATC
TAATTGCACTGCTCAGATGCCACACCCAGATTTAGAACTCAAACTCGCAA
CTCCCATGCCATTGGAGCTATATCAGATGCATGAATTTTGA
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protein sequence of LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1

>LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=201bp
MGIARKCSYCGKLGHNSRTCKSPLGHGDLKLFGVQLDISSSSSSTISFSS
PSYSALTNHFFSSSPSFRDENQNSDAFLLTANTLLSRIQDTKKGVAWTEE
EHKVFLLGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLRQSHNTFH
KTKHSRTLFHVPSSSTSTSSSSNCTAQMPHPDLELKLATPMPLELYQMHE
F
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mRNA from alignment at Chr_4-CM003374.1:32899688..32901578-

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g236500; organism=Vigna angularis; type=mRNA; length=1891bp; location=Sequence derived from: Chr_4-CM003374.1:32899688..32901578- (Vigna angularis
ATGGGAATAGCCAGAAAATGTTCATACTGTGGCAAATTAGGTCACAATTC
AAGGACTTGTAAAAGTCCTCTCGGTCATGGAGACCTGAAGCTCTTTGGAG
TGCAGCTTGACATTTCTTCTTCTTCATCTTCTACTATTTCTTTTTCTTCA
CCTTCGTATTCTGCCTTGACCAACCACTTCTTCTCTTCATCTCCTTCTTT
TCGTGATGAAAATCAAAATTCAGATGCTTTCTTACTCACTGCCAATACCC
TCCTATCGAGAATTCAAGACACAAAAAAAGGTTATTTTTCTTTCTTCATC
TGTTATTAATTCCAGTTATTAAGGACTTTTTTTTTATTTCCATTTGTTTT
CAGGAGAAAATCGTGTGTATACATACTTCTTTGAAATCATTGTTATCAAT
TTTTAATATGTTTATTTAAGATTTTATAAAATGATAATGTTATTATCAGA
GAATGAAGTTAGCTTTGTGTGAAGTTGAAATTTGCACTCAATATTGTAAT
TTGATCACTCGTTTAGTAGAATATCACATGCTAATGCTATAAATAACTCT
TTTAATGAATTTATGGTATGCTGTAATATTATATTAGAAGGTTAATTTTA
AATATAAACCAACCTTTAATGAATAATAACTAAATATATAGTCTATTTTT
TTTACTAAAAGTCCAAAAAGAGAAATATTAATATAAGGTAAAATGAGTTA
TGTGGTTGGAAAAACATAAAGAAAACAATTAATGAAACTTTAAAATAAAA
GTAAATATTACTCTTAAAAAATGATTTTTTTACTTATTTCAGTATTTTTT
TTCTTTGAATTTGAAATTATAGTTAAGTTCAAATTTAAAATAGTAGTTCT
TCATATCTGTTTTTTTTTTTAAATTAAGTAAACTTTTTTAAAAGTAAAAA
AGGAATTTGTACTTATTTCCATTTCAGGTTATGCTCAATAATTGTACTTA
TTTCCTTTTTGAAGTAGATATTAATCACTCAAATCATTTTAATAAAGTAT
ACGTTATTTTATAGCTTTTTAAATAAATAATCACATTTTATGTTTATAAT
AAAATAACACTCACTTGCTTTATATTTTTAATAAAGTGACACATCGACAC
ATTTTATTTAAAAATATCACATTAACTAAAATTTGAATAAAAATCGAAAA
TAAAACTTCAAAAATAAAAAAAATAAATTAAAAAAAGGAAAACTACATTT
TTTTATGAATAAAATAAGAGGAGCAATATTGTTACGTTATAAAAAAAAGA
AATGAATATATATTTAAAAATTACAGACAGTACACAAAGTATTTTATTAA
AAACATAAAAGAAATAAGTTTTTATTTTAAAATTAAAAAGAGTTCGAGTA
TTATTAGTAAATAAATTTATTGAAGAAAGTAAATCACTTCTTTTTTAAAG
TTAAACAAGTGGGCCTAACTAAAAGAGTGCGACTTGACATAAACAATTTC
TGACATATCTAAAGTGAAACTATTGTATAATGTATATAGAATAAATATTG
TTTTACATAGATAAATATATTGATGGTGGTTTGTAAGAAAATGTTGTTGT
CTGTGGAAAGTTCAGGTGTGGCATGGACAGAGGAGGAACACAAGGTGTTT
CTCTTAGGGCTACAGAAGCTGGGGAAGGGAAACTGGAGAGGCATATCGAA
AAGTTTTGTCAAAACAAGAACACCTGTGCAAGTTGCAAGTCATGCACAGA
AGTATTTTCTCCGACAATCTCACAATACCTTTCACAAAACAAAACACTCT
CGTACCTTGTTCCATGTCCCTTCTTCTTCAACTTCCACTTCATCTTCATC
TAATTGCACTGCTCAGATGCCACACCCAGATTTAGAACTCAAACTCGCAA
CTCCCATGCCATTGGAGCTATATCAGATGCATGAATTTTGA
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Coding sequence (CDS) from alignment at Chr_4-CM003374.1:32899688..32901578-

>LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g236500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g236500; organism=Vigna angularis; type=CDS; length=606bp; location=Sequence derived from: Chr_4-CM003374.1:32899688..32901578- (Vigna angularis
ATGGGAATAGCCAGAAAATGTTCATACTGTGGCAAATTAGGTCACAATTC
AAGGACTTGTAAAAGTCCTCTCGGTCATGGAGACCTGAAGCTCTTTGGAG
TGCAGCTTGACATTTCTTCTTCTTCATCTTCTACTATTTCTTTTTCTTCA
CCTTCGTATTCTGCCTTGACCAACCACTTCTTCTCTTCATCTCCTTCTTT
TCGTGATGAAAATCAAAATTCAGATGCTTTCTTACTCACTGCCAATACCC
TCCTATCGAGAATTCAAGACACAAAAAAAGGTGTGGCATGGACAGAGGAG
GAACACAAGGTGTTTCTCTTAGGGCTACAGAAGCTGGGGAAGGGAAACTG
GAGAGGCATATCGAAAAGTTTTGTCAAAACAAGAACACCTGTGCAAGTTG
CAAGTCATGCACAGAAGTATTTTCTCCGACAATCTCACAATACCTTTCAC
AAAACAAAACACTCTCGTACCTTGTTCCATGTCCCTTCTTCTTCAACTTC
CACTTCATCTTCATCTAATTGCACTGCTCAGATGCCACACCCAGATTTAG
AACTCAAACTCGCAACTCCCATGCCATTGGAGCTATATCAGATGCATGAA
TTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR001878Znf_CCHC
IPR009057Homeodomain-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0003677DNA binding