LR48_mrnaVigan08g161200

Transcript Overview
NameLR48_mrnaVigan08g161200
Unique NameLR48_mrnaVigan08g161200_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length2833
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_8-CM003378.1supercontigChr_8-CM003378.1:26284603..26287435 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR107Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR110Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR141Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasR089Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR092Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0086Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0089Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0295Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1054Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1056Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1138Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1143Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1201Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1207Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1213Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR168Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR180Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR192Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0195Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0197Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0218Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR132Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR134Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR143Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR174Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR119Pisum sativum Cameor genome v1aPisum sativum
aspsR131Pisum sativum Cameor genome v1aPisum sativum
aspsR155Pisum sativum Cameor genome v1aPisum sativum
aspsR169Pisum sativum Cameor genome v1aPisum sativum
aspvR119Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR150Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR093Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR109Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR119Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR125Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR115Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR117Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR169Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR116Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR118Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR173Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR094Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR114Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR129Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR131Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR138Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR139Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR147Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR152Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR088Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR102Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR113Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR119Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR099Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR104Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR126Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_17229Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr11.1519Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cr_16076.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Hedin2.R1.1g030240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_23512Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat5g287880.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Tiffany.R1.1g020240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Tiffany.R1.6g030800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_02657Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_30004Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg8964.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_004507049.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_00438.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vfaba.Hedin2.R1.6g038920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.011G058000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_004487183.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_014638076.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun11g162100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_01097.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_18894Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan08g161200gene-LR48_Vigan08g161200_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan08g161200LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-start_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26284603..26284605LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-start_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26284603..26284605Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26284603..26284741LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26284603..26284741Vigna angularisexon
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26284829..26285195LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26284829..26285195Vigna angularisexon
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285292..26285374LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285292..26285374Vigna angularisexon
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285636..26285724LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285636..26285724Vigna angularisexon
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285812..26285885LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285812..26285885Vigna angularisexon
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26286232..26286282LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26286232..26286282Vigna angularisexon
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26286392..26286468LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26286392..26286468Vigna angularisexon
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26286687..26287435LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26286687..26287435Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26284742..26284828LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26284742..26284828Vigna angularisintron
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285196..26285291LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285196..26285291Vigna angularisintron
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285375..26285635LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285375..26285635Vigna angularisintron
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285725..26285811LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285725..26285811Vigna angularisintron
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285886..26286231LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26285886..26286231Vigna angularisintron
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26286283..26286391LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26286283..26286391Vigna angularisintron
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26286469..26286686LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26286469..26286686Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS6986CDS6986_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-stop_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26287433..26287435LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1-stop_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:26287433..26287435Vigna angularisstop_codon


Homology
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=2 SV=1)

HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0
Identity = 347/571 (60.77%), Postives = 408/571 (71.45%), Query Frame = 1
Query:   82 HQFSLGLVNESMENPFQNHDWNLINTHSSNE-----VPKVADFLGVSK-SENQSELAALNEIQSNDSDYLFTNNSLVPL--QNPVV------DTPSN----EYQENANSNLQSLTLSMGS-------GKDSTCETSGENSTN----TVEAA-PRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKRE-EMIALXXX--------XXXXXXXXXXRLHAYPLMQHHQFEQP-QPLLTLQNHDISSHFSHQDPL------HQGYIQTQLQLHQQSGVSSYL-----QNNPQFYGGYLQNHPALLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSGNAVGAAEELGLVKVDYDMPXXXXXXXXXX-XXESMQTSN-GGVFTMWNE 1626
            H+++LGLV++ M+NPFQ  +WN+IN H         VPKVADFLGVSK  ENQS     + +  NDSDY F  NSL+P    N VV      +TP+N    E QE+A+ NLQSLTLSMG+        K S  ET+G+N++      VE A PRR LDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ   GGYDKE+KAAR+YDLAALKYWG STTTNFPI+NYEKE++EMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF+++RYDVKAILES+TLPIGGGAAKRLKEAQALESSRKRE EMIALGSS        T    TSS  +L  YPL      +QP +P L+LQN+DI SH+++ +        H  YIQTQL LHQQ+  ++YL     QN+ Q Y  YL ++PALL G+++     +++    ++ + ++                 S + VG+ EE   VK DYDMP+    G  +G  +ES+Q SN GGVFTMWNE
Sbjct:   21 HEYNLGLVSDHMDNPFQTQEWNMINPHGGGGDEGGEVPKVADFLGVSKPDENQSN----HLVAYNDSDYYFHTNSLMPSVQSNDVVVAACDSNTPNNSSYHELQESAH-NLQSLTLSMGTTAGNNVVDKASPSETTGDNASGGALAVVETATPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAALKYWGPSTTTNFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIGGGAAKRLKEAQALESSRKREAEMIALGSSFQYGGGSSTGSGSTSSRLQLQPYPL----SIQQPLEPFLSLQNNDI-SHYNNNNAHDSSSFNHHSYIQTQLHLHQQT--NNYLQQQSSQNSQQLYNAYLHSNPALLHGLVSTSIVDNNNNNGGSSGSYNTAAFLGNHGIGI-----GSSSTVGSTEEFPTVKTDYDMPSSDGTGGYSGWTSESVQGSNPGGVFTMWNE 574          
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: PLET2_ARATH (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=2 SV=1)

HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0
Identity = 368/593 (62.06%), Postives = 414/593 (69.81%), Query Frame = 1
Query:    7 NNWXXXXXXXXXXXXXXHDLQATQYHQFSLGLVNESMENPFQNHDWNLINTHSSNE----VPKVADFLGVSKSENQS---ELAALNEI-QSNDSDYLFTNNSLVPLQNPVVDTPSN-----EYQENANSNLQSLTLSMGSG----------KDSTCETSGENSTNT--------VEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALXX---------XXXXXXXXXXXRLHAYPLMQHHQFE---QPQPLLTLQ-NHDISSHFSHQDPLHQGYIQTQLQLHQQSGVSSYLQNN---PQFYGGYLQNHPALLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSGNAVGAAEELGLVKVDYDMPXXXXXXXXX--XXXESMQTSN-GGVFTMWNE 1626
            NNWL+FPLSPTHSSLP H + ++Q   F+LGLVN++++NPFQN  WN+IN H        VPKVADFLGVSKS +      L   N+I Q+N SDY F  NSL+P    VV   SN     E QE+A+ NLQSLTLSMGS           K S  ETS +NS++T        VEA PRRTL+TFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ   GGYDKEEKAARAYDLAALKYWG STTTNFPI+NYEKE++EMK+MTRQEFVA+IRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF+++RYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGS          +    +SS  +L  YPL     FE     QPLLTLQ N+DIS    + D     YIQTQL LHQQ   ++YLQ++    Q Y  YLQ++P LL G ++  +++S  +  N     S                 SS     A EE   VKVDYDMP  G         + ES Q SN GGVFTMWNE
Sbjct:    4 NNWLAFPLSPTHSSLPPH-IHSSQNSHFNLGLVNDNIDNPFQNQGWNMINPHGGGGEGGEVPKVADFLGVSKSGDHHTDHNLVPYNDIHQTNASDYYFQTNSLLPT---VVTCASNAPNNYELQESAH-NLQSLTLSMGSTGAAAAEVATVKASPAETSADNSSSTTNTSGGAIVEATPRRTLETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPSTTTNFPITNYEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSNFHQYGAASGSSSVASSSRLQLQPYPLSIQQPFEHLHHHQPLLTLQNNNDIS---QYHDSF--SYIQTQLHLHQQQ-TNNYLQSSSHTSQLYNAYLQSNPGLLHGFVSDNNNTSGFLGNNGIGIGS-----------------SSTVGSSAEEEFPAVKVDYDMPPSGGATGYGGWNSGESAQGSNPGGVFTMWNE 568          
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: BBM2_BRANA (AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus OX=3708 GN=BBM2 PE=2 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 5.659e-124
Identity = 211/346 (60.98%), Postives = 254/346 (73.41%), Query Frame = 1
Query:   88 FSLGLVNESMENPFQNHDWNLINTHSSNEV-------PKVADFLGVSKS-----ENQSELAALNEIQSNDSDYLFTNNSLVP--LQNPVVDTPSNEYQENANSNLQSLTLSMGSGKDSTCETSGENSTN----------TVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEA 1044
            F + L   + +N   + DW+ IN  + N +       PK+ +FLG + +     EN  ++         D        S++   L+N  VD   N  QEN N   + L+LSM S   ++C+ +  +S N          +VEA P++T+++FGQRTSIYRGVTRHRWTGRYEAHLWDNSC+REGQ+RKGRQ   GGYDKEEKAARAYDLAALKYWGT+TTTNFP+S YEKE++EMKHMTRQE+VA++RRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTF T+EEAAEAYDIAAIKFRGL AVTNFDM+RY+VKAILES +LPI G AAKRLKEA
Sbjct:   59 FGVVLDAFTRDNNSHSRDWD-INGSACNNIHNDEQDGPKLENFLGRTTTIYNTNENVGDIDGSGCYGGGDGGGGSLGLSMIKTWLRNQPVDNVDN--QENGNG-AKGLSLSMNSS--TSCDNNNYSSNNLVAQGKTIDDSVEATPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEIEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPI-GSAAKRLKEA 397          
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: BBM1_BRANA (AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus OX=3708 GN=BBM1 PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.542e-122
Identity = 210/346 (60.69%), Postives = 256/346 (73.99%), Query Frame = 1
Query:   94 LGLVNESM--ENPFQNHDWNLINTHSSNEV-------PKVADFLGVSKS-----ENQSELAALNEIQSNDSDYLFTNNSLVP--LQNPVVDTPSNEYQENANSNLQSLTLSMGSGKDSTCETS----------GENSTNTVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEA 1044
             G+V ++   +N   + DW+ IN  + N +       PK+ +FLG + +     EN  + +        D        S++   L+N  VD   N  QEN N+  + L+LSM S   ++C+ +          G+   ++VEA P++T+++FGQRTSIYRGVTRHRWTGRYEAHLWDNSC+REGQ+RKGRQ   GGYDKEEKAARAYDLAALKYWGT+TTTNFP+S YEKE++EMKHMTRQE+VA++RRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTF T+EEAAEAYDIAAIKFRGL AVTNFDM+RY+VKAILES +LPI G AAKRLKEA
Sbjct:   59 FGVVVDAFTRDNNSHSRDWD-INGCACNNIHNDEQDGPKLENFLGRTTTIYNTNENVGDGSGSGCYGGGDGGGGSLGLSMIKTWLRNQPVDNVDN--QENGNA-AKGLSLSMNS--STSCDNNNDSNNNVVAQGKTIDDSVEATPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPI-GSAAKRLKEA 397          
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: BBM_ARATH (AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana OX=3702 GN=BBM PE=2 SV=2)

HSP 1 Score: 360.533 bits (924), Expect = 8.996e-117
Identity = 173/209 (82.78%), Postives = 196/209 (93.78%), Query Frame = 1
Query:  427 TNTVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEA 1044
             + VE  P++T+++FGQRTSIYRGVTRHRWTGRYEAHLWDNSC+REGQ+RKGRQ   GGYDKEEKAARAYDLAALKYWGT+TTTNFP+S YEKE++EMKHMTRQE+VA++RRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTF T+EEAAEAYDIAAIKFRGL+AVTNFDM+RY+VKAILES +LPI G +AKRLK+ 
Sbjct:  190 VDVVETTPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPI-GSSAKRLKDV 397          
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: AIL5_ARATH (AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana OX=3702 GN=AIL5 PE=2 SV=2)

HSP 1 Score: 357.066 bits (915), Expect = 8.567e-116
Identity = 192/292 (65.75%), Postives = 223/292 (76.37%), Query Frame = 1
Query:  178 PKVADFLGVSKSENQSELAALNEIQSNDSDYLFTNNSLVPLQNPVVDTPSNEYQENANSNLQSLTLS-MG------SGKDSTCETSGENSTNTVEAAP--RRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGG 1017
            PK+ +FLG   S   +    + ++QS     +F+++   PL  P          E  +S L+S+  S +G      S + S+      N     EA+P  ++ +++FGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ   GGYDKE+KAARAYDLAALKYWG +TTTNFPISNYE EL+EMKHMTRQEFVA++RRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFST+EEAAEAYDIAAIKFRGLNAVTNFD+SRYDVK+I   N LP+GG
Sbjct:  101 PKLENFLGGGASTTTTR--PMQQVQS-LGGVVFSSDLQPPLHPPSA-------AEIYDSELKSIAASFLGNYSGGHSSEVSSVHKQQPNPLAVSEASPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIASCN-LPVGG 381          
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: AIL6_ARATH (AP2-like ethylene-responsive transcription factor AIL6 OS=Arabidopsis thaliana OX=3702 GN=AIL6 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 2.476e-106
Identity = 168/221 (76.02%), Postives = 198/221 (89.59%), Query Frame = 1
Query:  424 STNTVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIA 1086
            +  T + + ++  DTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ+RKGRQGGYDKE+KAARAYDLAALKYW  + TTNFPI+NY KE++EMKHMT+QEF+A++RRKSSGFSRGAS+YRGVTRHHQ GRWQARIGRVAGNKDLYLGTF+TEEEAAEAYDIAAIKFRG+NAVTNF+M+RYDV+AI++S  LPI GGAAKRLK +    +S +++ ++ 
Sbjct:  247 AVETSDCSNKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWNATATTNFPITNYSKEVEEMKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDVEAIMKS-ALPI-GGAAKRLKLSLEAAASSEQKPILG 465          
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: CRL5_ORYSJ (AP2-like ethylene-responsive transcription factor CRL5 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL5 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.972e-105
Identity = 162/220 (73.64%), Postives = 183/220 (83.18%), Query Frame = 1
Query:  403 CETSGENSTNTVEAAP-------------------RRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTL 1005
            C T+GE     V AA                    R+++DTFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+RKGRQGGYD EEKAARAYDLAALKYWG ST  NFP+ +Y++EL+EMK+MTRQE+VA +RRKSSGFSRGASMYRGVTRHHQHGRWQARIGRV+GNKDLYLGTFST+EEAAEAYD+AAIKFRGLNAVTNFD++RYDV  I+ SNTL
Sbjct:  241 CITAGEYGMAAVAAADGGRKRGGAGGGGQKQPVHHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVSGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDITRYDVDKIMASNTL 460          
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: AIL7_ARATH (AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana OX=3702 GN=AIL7 PE=2 SV=2)

HSP 1 Score: 327.02 bits (837), Expect = 6.521e-105
Identity = 163/211 (77.25%), Postives = 192/211 (91.00%), Query Frame = 1
Query:  433 TVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALE 1056
            T + + ++ ++T GQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ+RKGRQ   GGYDKE++AARAYDLAALKYWG++ TTNFP+S+Y KEL+EM HMT+QEF+A++RRKSSGFSRGAS+YRGVTRHHQ GRWQARIGRVAGNKDLYLGTF+TEEEAAEAYDIAAIKFRG+NAVTNF+M+RYD++A++ S +LP+GG AAKR K   ALE
Sbjct:  213 TSDDSKKKIVETLGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDRAARAYDLAALKYWGSTATTNFPVSSYSKELEEMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDIEAVMNS-SLPVGGAAAKRHKLKLALE 422          
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: AIL1_ARATH (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana OX=3702 GN=AIL1 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.644e-104
Identity = 164/241 (68.05%), Postives = 193/241 (80.08%), Query Frame = 1
Query:  343 NANSNLQSLTLSMGSGKDSTCETS-----------GENSTNTV------EAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTL 1005
            N N ++ SL LS G+  D   E++            E     V      E+ PR+++D++GQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+R+GRQ   GGYD+EEKAARAYDLAALKYWG +T  NFP+SNYEKE++E+ +M RQEFVA +RR SSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFST+EEAAEAYDIAAIKFRGLNAVTNFD++RYDVK I  S+T+
Sbjct:  158 NTNGSMLSLALSHGACSDLINESNVSARVEEPVKVDEKRKRLVVKPQVKESVPRKSVDSYGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRRGRQVYLGGYDEEEKAARAYDLAALKYWGPTTHLNFPLSNYEKEIEELNNMNRQEFVAMLRRNSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDINRYDVKRICSSSTI 398          
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
PLET1_ARATH0.000e+060.77AP2-like ethylene-responsive transcription factor ... [more]
PLET2_ARATH0.000e+062.06AP2-like ethylene-responsive transcription factor ... [more]
BBM2_BRANA5.659e-12460.98AP2-like ethylene-responsive transcription factor ... [more]
BBM1_BRANA3.542e-12260.69AP2-like ethylene-responsive transcription factor ... [more]
BBM_ARATH8.996e-11782.78AP2-like ethylene-responsive transcription factor ... [more]
AIL5_ARATH8.567e-11665.75AP2-like ethylene-responsive transcription factor ... [more]
AIL6_ARATH2.476e-10676.02AP2-like ethylene-responsive transcription factor ... [more]
CRL5_ORYSJ1.972e-10573.64AP2-like ethylene-responsive transcription factor ... [more]
AIL7_ARATH6.521e-10577.25AP2-like ethylene-responsive transcription factor ... [more]
AIL1_ARATH1.644e-10468.05AP2-like ethylene-responsive transcription factor ... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 164..175
score: 45.3
coord: 302..322
score: 51.52
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 262..326
e-value: 8.6E-33
score: 124.9
coord: 163..232
e-value: 3.2E-23
score: 93.1
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 163..218
e-value: 2.4E-8
score: 34.0
coord: 263..312
e-value: 2.7E-9
score: 37.0
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 163..226
score: 17.504
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 262..320
score: 19.375
IPR001471AP2/ERF domainCDDcd00018AP2coord: 162..228
e-value: 3.67174E-20
score: 81.9343
IPR001471AP2/ERF domainCDDcd00018AP2coord: 261..322
e-value: 1.13438E-24
score: 95.031
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 262..322
e-value: 6.9E-20
score: 72.6
coord: 163..228
e-value: 1.2E-16
score: 62.3
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 261..322
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 162..228

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g161200; organism=Vigna angularis; type=mRNA; length=2833bp
ATGAACAACAACTGGCTTTCTTTCCCTCTTTCTCCCACTCATTCTTCCTT
ACCATCCCATGATCTTCAAGCAACTCAGTACCACCAATTTTCCCTTGGGC
TGGTGAACGAAAGCATGGAAAACCCTTTCCAAAATCATGGTaaccttctc
tctcttctctctcttctcattCTATATTTATTTGCCTTGCTAATCTTTCT
TTTCATCTATTTAATTAATTCGACAGATTGGAATCTGATTAACACTCATA
GCAGCAACGAAGTTCCAAAAGTGGCTGATTTTCTTGGAGTGAGCAAGTCT
GAAAATCAGTCAGAGCTTGCTGCTTTAAACGAAATTCAGTCAAATGATTC
AGATTATCTGTTCACAAACAACAGTCTGGTACCTTTGCAAAACCCCGTGG
TGGACACACCAAGCAATGAGTATCAAGAAAATGCTAACAGTAACTTGCAA
TCGTTGACATTATCCATGGGAAGTGGTAAGGATTCTACATGTGAAACCAG
TGGTGAAAATAGTACAAACACTGTCGAAGCTGCACCTAGAAGAACTTTGG
ATACTTTCGGTCAGAGAACATCCATATATCGTGGAGTAACACGGTTGGAT
ACTCATTCTGTGTTTCacttaatcaatattttttgtgtgtgtgcaaggtt
tgtttatttattgttctaattaaatgtatatataaacagACATAGATGGA
CTGGAAGGTATGAAGCTCACCTTTGGGATAATAGCTGTAGAAGGGAAGGA
CAATCAAGAAAAGGACGCCAAGGTGATTAAACTTCATATCActtcatttt
gagttttatttttgaagttttttagGTGATGTTTATTGATTGAGAGTTCT
ATTAACACATTTTTCTTGATGTTTTGCTTTTGTTAATACTTCTCATCAAC
TTTCCTTCAGTTTATTTGGGTAAGTGTTTCCATTTCAGTCTATTTTCCAG
ccccttttcattttctaagTTCCTGGAGGTAGAAAATCAAACCACAAAAT
GTATTGTTTTccttttgttatttataatgtCAGGTGGATATGATAAAGAA
GAGAAAGCAGCTAGGGCTTATGATTTAGCAGCACTGAAGTACTGGGGAAC
ATCCACCACTACCAACTTTCCAGTAAGTTAATGGTGTACTTTCTCAATGC
TTCTCAGACTCTATCTAGTTCAAGGAAATCttgtttgttttactttaatt
tttccACAGATTAGCAACTACGAGAAGGAATTGGATGAAATGAAACACAT
GACCAGACAAGAATTTGTTGCCGCTATAAGAAGGTGACTAATTCAAAGAC
AGCGTGCATAAAACATGTACAATACAAGTCTACAATAGTGCAATAACGGA
gacaagtaaaattaatttttgaatctAGTCCACTTTGTTACACAAACACA
CTAGCATAGTTTAATTAGAGTCACTTGCTAAACTTTTGACAACTGAGAAC
GCAATTAAATTACGAACTTGATTGTGGCAAACATTAAAATACACAACATG
GCTTCGTTTTGATGAGTTTGTATCTGATAGTTATCGAAATAGGTTAAAAA
GTTTATAACACCATTTCATAATATTCTTACAACTCTTTCAAATGCTTATT
AATAGGCATATTGTGGTGGTGATTTGCAGGAAAAGTAGTGGTTTCTCTAG
AGGTGCATCAATGTATCGCGGAGTTACAAGGTTTCAAATGGAGCAGCcat
gctttcttcttcttcttcctctcatcCCATGCATTCGCTCCTTTTCTTTC
TACTCTTTTCTTAGcagaatattattattctttgaTCAGGCATCACCAAC
ACGGAAGATGGCAAGCAAGGATTGGTAGAGTTGCAGGAAACAAAGATCTT
TACTTGGGAACTTTCAGTAAGCCACCCACATAAATTTAAACATTGAAAGT
TACACTaatcagattttcaaattaaccAACGTGAAACAATATTTATTAGG
AAAAAAACATTACCCCATATGTTATAGTATCTCGAACGATTAAAGTCTTT
GAATTTTGAACCCGGATGTCTTGTTAGATtcatgaaagaaaaacaaatat
gtaTAGGTGAAATATACATTATTTCTCGTTGCAGGTACTGAGGAAGAGGC
TGCAGAGGCTTACGACATAGCAGCGATAAAGTTCAGAGGTCTCAACGCTG
TCACAAACTTTGACATGAGCCGTTATGACGTGAAAGCTATTCTCGAAAGC
AACACTCTCCCGATAGGAGGAGGCGCTGCAAAACGTCTGAAAGAAGCTCA
AGCTCTAGAATCTTCTAGAAAACGTGAAGAGATGATTGCACTAGGCTCAT
CTACCTTCCAATATGGAACCTCAAGCTCTTCCAGGCTACACGCTTACCCT
CTAATGCAGCACCACCAGTTCGAGCAACCTCAACCTCTGCTAACCTTGCA
AAACCATGACATAAGCTCTCACTTCTCTCACCAGGACCCTTTACACCAGG
GTTACATCCAAACGCAGCTTCAGTTGCACCAGCAGAGTGGTGTTTCTTCT
TACCTCCAGAATAATCCTCAGTTCTACGGCGGCTACCTTCAGAACCACCC
TGCATTGCTTCAGGGAATGATGAACATggggtcttcttcttcttcatctg
tGTTGGagaataataacaacaataatagcAGTGTTGGTGGGTTTGCAGCA
GGGAGTGGGTTTGGTATGGCTTCGAATCCATCGTCGGGTAACGCAGTGGG
CGCGGCGGAGGAACTTGGCTTGGTGAAGGTTGACTATGACATGCCAGCCG
GAGGTTACGGCGGTTGGTCGGCGGGGGCGGCGGAATCCATGCAGACGTCA
AATGGTGGGGTGTTCACAATGTGGAATGAGTGA
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protein sequence of LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1

>LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=542bp
MNNNWLSFPLSPTHSSLPSHDLQATQYHQFSLGLVNESMENPFQNHDWNL
INTHSSNEVPKVADFLGVSKSENQSELAALNEIQSNDSDYLFTNNSLVPL
QNPVVDTPSNEYQENANSNLQSLTLSMGSGKDSTCETSGENSTNTVEAAP
RRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYD
KEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIR
RKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAA
EAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQA
LESSRKREEMIALGSSTFQYGTSSSSRLHAYPLMQHHQFEQPQPLLTLQN
HDISSHFSHQDPLHQGYIQTQLQLHQQSGVSSYLQNNPQFYGGYLQNHPA
LLQGMMNMGSSSSSSVLENNNNNNSSVGGFAAGSGFGMASNPSSGNAVGA
AEELGLVKVDYDMPAGGYGGWSAGAAESMQTSNGGVFTMWNE
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mRNA from alignment at Chr_8-CM003378.1:26284603..26287435+

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g161200; organism=Vigna angularis; type=mRNA; length=2833bp; location=Sequence derived from: Chr_8-CM003378.1:26284603..26287435+ (Vigna angularis
ATGAACAACAACTGGCTTTCTTTCCCTCTTTCTCCCACTCATTCTTCCTT ACCATCCCATGATCTTCAAGCAACTCAGTACCACCAATTTTCCCTTGGGC TGGTGAACGAAAGCATGGAAAACCCTTTCCAAAATCATGGTaaccttctc tctcttctctctcttctcattCTATATTTATTTGCCTTGCTAATCTTTCT TTTCATCTATTTAATTAATTCGACAGATTGGAATCTGATTAACACTCATA GCAGCAACGAAGTTCCAAAAGTGGCTGATTTTCTTGGAGTGAGCAAGTCT GAAAATCAGTCAGAGCTTGCTGCTTTAAACGAAATTCAGTCAAATGATTC AGATTATCTGTTCACAAACAACAGTCTGGTACCTTTGCAAAACCCCGTGG TGGACACACCAAGCAATGAGTATCAAGAAAATGCTAACAGTAACTTGCAA TCGTTGACATTATCCATGGGAAGTGGTAAGGATTCTACATGTGAAACCAG TGGTGAAAATAGTACAAACACTGTCGAAGCTGCACCTAGAAGAACTTTGG ATACTTTCGGTCAGAGAACATCCATATATCGTGGAGTAACACGGTTGGAT ACTCATTCTGTGTTTCacttaatcaatattttttgtgtgtgtgcaaggtt tgtttatttattgttctaattaaatgtatatataaacagACATAGATGGA CTGGAAGGTATGAAGCTCACCTTTGGGATAATAGCTGTAGAAGGGAAGGA CAATCAAGAAAAGGACGCCAAGGTGATTAAACTTCATATCActtcatttt gagttttatttttgaagttttttagGTGATGTTTATTGATTGAGAGTTCT ATTAACACATTTTTCTTGATGTTTTGCTTTTGTTAATACTTCTCATCAAC TTTCCTTCAGTTTATTTGGGTAAGTGTTTCCATTTCAGTCTATTTTCCAG ccccttttcattttctaagTTCCTGGAGGTAGAAAATCAAACCACAAAAT GTATTGTTTTccttttgttatttataatgtCAGGTGGATATGATAAAGAA GAGAAAGCAGCTAGGGCTTATGATTTAGCAGCACTGAAGTACTGGGGAAC ATCCACCACTACCAACTTTCCAGTAAGTTAATGGTGTACTTTCTCAATGC TTCTCAGACTCTATCTAGTTCAAGGAAATCttgtttgttttactttaatt tttccACAGATTAGCAACTACGAGAAGGAATTGGATGAAATGAAACACAT GACCAGACAAGAATTTGTTGCCGCTATAAGAAGGTGACTAATTCAAAGAC AGCGTGCATAAAACATGTACAATACAAGTCTACAATAGTGCAATAACGGA gacaagtaaaattaatttttgaatctAGTCCACTTTGTTACACAAACACA CTAGCATAGTTTAATTAGAGTCACTTGCTAAACTTTTGACAACTGAGAAC GCAATTAAATTACGAACTTGATTGTGGCAAACATTAAAATACACAACATG GCTTCGTTTTGATGAGTTTGTATCTGATAGTTATCGAAATAGGTTAAAAA GTTTATAACACCATTTCATAATATTCTTACAACTCTTTCAAATGCTTATT AATAGGCATATTGTGGTGGTGATTTGCAGGAAAAGTAGTGGTTTCTCTAG AGGTGCATCAATGTATCGCGGAGTTACAAGGTTTCAAATGGAGCAGCcat gctttcttcttcttcttcctctcatcCCATGCATTCGCTCCTTTTCTTTC TACTCTTTTCTTAGcagaatattattattctttgaTCAGGCATCACCAAC ACGGAAGATGGCAAGCAAGGATTGGTAGAGTTGCAGGAAACAAAGATCTT TACTTGGGAACTTTCAGTAAGCCACCCACATAAATTTAAACATTGAAAGT TACACTaatcagattttcaaattaaccAACGTGAAACAATATTTATTAGG AAAAAAACATTACCCCATATGTTATAGTATCTCGAACGATTAAAGTCTTT GAATTTTGAACCCGGATGTCTTGTTAGATtcatgaaagaaaaacaaatat gtaTAGGTGAAATATACATTATTTCTCGTTGCAGGTACTGAGGAAGAGGC TGCAGAGGCTTACGACATAGCAGCGATAAAGTTCAGAGGTCTCAACGCTG TCACAAACTTTGACATGAGCCGTTATGACGTGAAAGCTATTCTCGAAAGC AACACTCTCCCGATAGGAGGAGGCGCTGCAAAACGTCTGAAAGAAGCTCA AGCTCTAGAATCTTCTAGAAAACGTGAAGAGATGATTGCACTAGGCTCAT CTACCTTCCAATATGGAACCTCAAGCTCTTCCAGGCTACACGCTTACCCT CTAATGCAGCACCACCAGTTCGAGCAACCTCAACCTCTGCTAACCTTGCA AAACCATGACATAAGCTCTCACTTCTCTCACCAGGACCCTTTACACCAGG GTTACATCCAAACGCAGCTTCAGTTGCACCAGCAGAGTGGTGTTTCTTCT TACCTCCAGAATAATCCTCAGTTCTACGGCGGCTACCTTCAGAACCACCC TGCATTGCTTCAGGGAATGATGAACATggggtcttcttcttcttcatctg tGTTGGagaataataacaacaataatagcAGTGTTGGTGGGTTTGCAGCA GGGAGTGGGTTTGGTATGGCTTCGAATCCATCGTCGGGTAACGCAGTGGG CGCGGCGGAGGAACTTGGCTTGGTGAAGGTTGACTATGACATGCCAGCCG GAGGTTACGGCGGTTGGTCGGCGGGGGCGGCGGAATCCATGCAGACGTCA AATGGTGGGGTGTTCACAATGTGGAATGAGTGA
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Coding sequence (CDS) from alignment at Chr_8-CM003378.1:26284603..26287435+

>LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g161200; organism=Vigna angularis; type=CDS; length=1629bp; location=Sequence derived from: Chr_8-CM003378.1:26284603..26287435+ (Vigna angularis
ATGAACAACAACTGGCTTTCTTTCCCTCTTTCTCCCACTCATTCTTCCTT
ACCATCCCATGATCTTCAAGCAACTCAGTACCACCAATTTTCCCTTGGGC
TGGTGAACGAAAGCATGGAAAACCCTTTCCAAAATCATGATTGGAATCTG
ATTAACACTCATAGCAGCAACGAAGTTCCAAAAGTGGCTGATTTTCTTGG
AGTGAGCAAGTCTGAAAATCAGTCAGAGCTTGCTGCTTTAAACGAAATTC
AGTCAAATGATTCAGATTATCTGTTCACAAACAACAGTCTGGTACCTTTG
CAAAACCCCGTGGTGGACACACCAAGCAATGAGTATCAAGAAAATGCTAA
CAGTAACTTGCAATCGTTGACATTATCCATGGGAAGTGGTAAGGATTCTA
CATGTGAAACCAGTGGTGAAAATAGTACAAACACTGTCGAAGCTGCACCT
AGAAGAACTTTGGATACTTTCGGTCAGAGAACATCCATATATCGTGGAGT
AACACGACATAGATGGACTGGAAGGTATGAAGCTCACCTTTGGGATAATA
GCTGTAGAAGGGAAGGACAATCAAGAAAAGGACGCCAAGGTGGATATGAT
AAAGAAGAGAAAGCAGCTAGGGCTTATGATTTAGCAGCACTGAAGTACTG
GGGAACATCCACCACTACCAACTTTCCAATTAGCAACTACGAGAAGGAAT
TGGATGAAATGAAACACATGACCAGACAAGAATTTGTTGCCGCTATAAGA
AGGAAAAGTAGTGGTTTCTCTAGAGGTGCATCAATGTATCGCGGAGTTAC
AAGGCATCACCAACACGGAAGATGGCAAGCAAGGATTGGTAGAGTTGCAG
GAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAGGAAGAGGCTGCA
GAGGCTTACGACATAGCAGCGATAAAGTTCAGAGGTCTCAACGCTGTCAC
AAACTTTGACATGAGCCGTTATGACGTGAAAGCTATTCTCGAAAGCAACA
CTCTCCCGATAGGAGGAGGCGCTGCAAAACGTCTGAAAGAAGCTCAAGCT
CTAGAATCTTCTAGAAAACGTGAAGAGATGATTGCACTAGGCTCATCTAC
CTTCCAATATGGAACCTCAAGCTCTTCCAGGCTACACGCTTACCCTCTAA
TGCAGCACCACCAGTTCGAGCAACCTCAACCTCTGCTAACCTTGCAAAAC
CATGACATAAGCTCTCACTTCTCTCACCAGGACCCTTTACACCAGGGTTA
CATCCAAACGCAGCTTCAGTTGCACCAGCAGAGTGGTGTTTCTTCTTACC
TCCAGAATAATCCTCAGTTCTACGGCGGCTACCTTCAGAACCACCCTGCA
TTGCTTCAGGGAATGATGAACATggggtcttcttcttcttcatctgtGTT
GGagaataataacaacaataatagcAGTGTTGGTGGGTTTGCAGCAGGGA
GTGGGTTTGGTATGGCTTCGAATCCATCGTCGGGTAACGCAGTGGGCGCG
GCGGAGGAACTTGGCTTGGTGAAGGTTGACTATGACATGCCAGCCGGAGG
TTACGGCGGTTGGTCGGCGGGGGCGGCGGAATCCATGCAGACGTCAAATG
GTGGGGTGTTCACAATGTGGAATGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription