LR48_mrnaVigan08g161200
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Homology
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=2 SV=1) HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0 Identity = 347/571 (60.77%), Postives = 408/571 (71.45%), Query Frame = 1 Query: 82 HQFSLGLVNESMENPFQNHDWNLINTHSSNE-----VPKVADFLGVSK-SENQSELAALNEIQSNDSDYLFTNNSLVPL--QNPVV------DTPSN----EYQENANSNLQSLTLSMGS-------GKDSTCETSGENSTN----TVEAA-PRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKRE-EMIALXXX--------XXXXXXXXXXRLHAYPLMQHHQFEQP-QPLLTLQNHDISSHFSHQDPL------HQGYIQTQLQLHQQSGVSSYL-----QNNPQFYGGYLQNHPALLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSGNAVGAAEELGLVKVDYDMPXXXXXXXXXX-XXESMQTSN-GGVFTMWNE 1626
H+++LGLV++ M+NPFQ +WN+IN H VPKVADFLGVSK ENQS + + NDSDY F NSL+P N VV +TP+N E QE+A+ NLQSLTLSMG+ K S ET+G+N++ VE A PRR LDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ GGYDKE+KAAR+YDLAALKYWG STTTNFPI+NYEKE++EMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF+++RYDVKAILES+TLPIGGGAAKRLKEAQALESSRKRE EMIALGSS T TSS +L YPL +QP +P L+LQN+DI SH+++ + H YIQTQL LHQQ+ ++YL QN+ Q Y YL ++PALL G+++ +++ ++ + ++ S + VG+ EE VK DYDMP+ G +G +ES+Q SN GGVFTMWNE
Sbjct: 21 HEYNLGLVSDHMDNPFQTQEWNMINPHGGGGDEGGEVPKVADFLGVSKPDENQSN----HLVAYNDSDYYFHTNSLMPSVQSNDVVVAACDSNTPNNSSYHELQESAH-NLQSLTLSMGTTAGNNVVDKASPSETTGDNASGGALAVVETATPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAALKYWGPSTTTNFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIGGGAAKRLKEAQALESSRKREAEMIALGSSFQYGGGSSTGSGSTSSRLQLQPYPL----SIQQPLEPFLSLQNNDI-SHYNNNNAHDSSSFNHHSYIQTQLHLHQQT--NNYLQQQSSQNSQQLYNAYLHSNPALLHGLVSTSIVDNNNNNGGSSGSYNTAAFLGNHGIGI-----GSSSTVGSTEEFPTVKTDYDMPSSDGTGGYSGWTSESVQGSNPGGVFTMWNE 574
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: PLET2_ARATH (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=2 SV=1) HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0 Identity = 368/593 (62.06%), Postives = 414/593 (69.81%), Query Frame = 1 Query: 7 NNWXXXXXXXXXXXXXXHDLQATQYHQFSLGLVNESMENPFQNHDWNLINTHSSNE----VPKVADFLGVSKSENQS---ELAALNEI-QSNDSDYLFTNNSLVPLQNPVVDTPSN-----EYQENANSNLQSLTLSMGSG----------KDSTCETSGENSTNT--------VEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALXX---------XXXXXXXXXXXRLHAYPLMQHHQFE---QPQPLLTLQ-NHDISSHFSHQDPLHQGYIQTQLQLHQQSGVSSYLQNN---PQFYGGYLQNHPALLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSGNAVGAAEELGLVKVDYDMPXXXXXXXXX--XXXESMQTSN-GGVFTMWNE 1626
NNWL+FPLSPTHSSLP H + ++Q F+LGLVN++++NPFQN WN+IN H VPKVADFLGVSKS + L N+I Q+N SDY F NSL+P VV SN E QE+A+ NLQSLTLSMGS K S ETS +NS++T VEA PRRTL+TFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ GGYDKEEKAARAYDLAALKYWG STTTNFPI+NYEKE++EMK+MTRQEFVA+IRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF+++RYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGS + +SS +L YPL FE QPLLTLQ N+DIS + D YIQTQL LHQQ ++YLQ++ Q Y YLQ++P LL G ++ +++S + N S SS A EE VKVDYDMP G + ES Q SN GGVFTMWNE
Sbjct: 4 NNWLAFPLSPTHSSLPPH-IHSSQNSHFNLGLVNDNIDNPFQNQGWNMINPHGGGGEGGEVPKVADFLGVSKSGDHHTDHNLVPYNDIHQTNASDYYFQTNSLLPT---VVTCASNAPNNYELQESAH-NLQSLTLSMGSTGAAAAEVATVKASPAETSADNSSSTTNTSGGAIVEATPRRTLETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPSTTTNFPITNYEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSNFHQYGAASGSSSVASSSRLQLQPYPLSIQQPFEHLHHHQPLLTLQNNNDIS---QYHDSF--SYIQTQLHLHQQQ-TNNYLQSSSHTSQLYNAYLQSNPGLLHGFVSDNNNTSGFLGNNGIGIGS-----------------SSTVGSSAEEEFPAVKVDYDMPPSGGATGYGGWNSGESAQGSNPGGVFTMWNE 568
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: BBM2_BRANA (AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus OX=3708 GN=BBM2 PE=2 SV=1) HSP 1 Score: 379.022 bits (972), Expect = 5.659e-124 Identity = 211/346 (60.98%), Postives = 254/346 (73.41%), Query Frame = 1 Query: 88 FSLGLVNESMENPFQNHDWNLINTHSSNEV-------PKVADFLGVSKS-----ENQSELAALNEIQSNDSDYLFTNNSLVP--LQNPVVDTPSNEYQENANSNLQSLTLSMGSGKDSTCETSGENSTN----------TVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEA 1044
F + L + +N + DW+ IN + N + PK+ +FLG + + EN ++ D S++ L+N VD N QEN N + L+LSM S ++C+ + +S N +VEA P++T+++FGQRTSIYRGVTRHRWTGRYEAHLWDNSC+REGQ+RKGRQ GGYDKEEKAARAYDLAALKYWGT+TTTNFP+S YEKE++EMKHMTRQE+VA++RRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTF T+EEAAEAYDIAAIKFRGL AVTNFDM+RY+VKAILES +LPI G AAKRLKEA
Sbjct: 59 FGVVLDAFTRDNNSHSRDWD-INGSACNNIHNDEQDGPKLENFLGRTTTIYNTNENVGDIDGSGCYGGGDGGGGSLGLSMIKTWLRNQPVDNVDN--QENGNG-AKGLSLSMNSS--TSCDNNNYSSNNLVAQGKTIDDSVEATPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEIEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPI-GSAAKRLKEA 397
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: BBM1_BRANA (AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus OX=3708 GN=BBM1 PE=2 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.542e-122 Identity = 210/346 (60.69%), Postives = 256/346 (73.99%), Query Frame = 1 Query: 94 LGLVNESM--ENPFQNHDWNLINTHSSNEV-------PKVADFLGVSKS-----ENQSELAALNEIQSNDSDYLFTNNSLVP--LQNPVVDTPSNEYQENANSNLQSLTLSMGSGKDSTCETS----------GENSTNTVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEA 1044
G+V ++ +N + DW+ IN + N + PK+ +FLG + + EN + + D S++ L+N VD N QEN N+ + L+LSM S ++C+ + G+ ++VEA P++T+++FGQRTSIYRGVTRHRWTGRYEAHLWDNSC+REGQ+RKGRQ GGYDKEEKAARAYDLAALKYWGT+TTTNFP+S YEKE++EMKHMTRQE+VA++RRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTF T+EEAAEAYDIAAIKFRGL AVTNFDM+RY+VKAILES +LPI G AAKRLKEA
Sbjct: 59 FGVVVDAFTRDNNSHSRDWD-INGCACNNIHNDEQDGPKLENFLGRTTTIYNTNENVGDGSGSGCYGGGDGGGGSLGLSMIKTWLRNQPVDNVDN--QENGNA-AKGLSLSMNS--STSCDNNNDSNNNVVAQGKTIDDSVEATPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPI-GSAAKRLKEA 397
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: BBM_ARATH (AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana OX=3702 GN=BBM PE=2 SV=2) HSP 1 Score: 360.533 bits (924), Expect = 8.996e-117 Identity = 173/209 (82.78%), Postives = 196/209 (93.78%), Query Frame = 1 Query: 427 TNTVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEA 1044
+ VE P++T+++FGQRTSIYRGVTRHRWTGRYEAHLWDNSC+REGQ+RKGRQ GGYDKEEKAARAYDLAALKYWGT+TTTNFP+S YEKE++EMKHMTRQE+VA++RRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTF T+EEAAEAYDIAAIKFRGL+AVTNFDM+RY+VKAILES +LPI G +AKRLK+
Sbjct: 190 VDVVETTPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPI-GSSAKRLKDV 397
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: AIL5_ARATH (AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana OX=3702 GN=AIL5 PE=2 SV=2) HSP 1 Score: 357.066 bits (915), Expect = 8.567e-116 Identity = 192/292 (65.75%), Postives = 223/292 (76.37%), Query Frame = 1 Query: 178 PKVADFLGVSKSENQSELAALNEIQSNDSDYLFTNNSLVPLQNPVVDTPSNEYQENANSNLQSLTLS-MG------SGKDSTCETSGENSTNTVEAAP--RRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGG 1017
PK+ +FLG S + + ++QS +F+++ PL P E +S L+S+ S +G S + S+ N EA+P ++ +++FGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ GGYDKE+KAARAYDLAALKYWG +TTTNFPISNYE EL+EMKHMTRQEFVA++RRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFST+EEAAEAYDIAAIKFRGLNAVTNFD+SRYDVK+I N LP+GG
Sbjct: 101 PKLENFLGGGASTTTTR--PMQQVQS-LGGVVFSSDLQPPLHPPSA-------AEIYDSELKSIAASFLGNYSGGHSSEVSSVHKQQPNPLAVSEASPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIASCN-LPVGG 381
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: AIL6_ARATH (AP2-like ethylene-responsive transcription factor AIL6 OS=Arabidopsis thaliana OX=3702 GN=AIL6 PE=2 SV=1) HSP 1 Score: 333.569 bits (854), Expect = 2.476e-106 Identity = 168/221 (76.02%), Postives = 198/221 (89.59%), Query Frame = 1 Query: 424 STNTVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIA 1086
+ T + + ++ DTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ+RKGRQGGYDKE+KAARAYDLAALKYW + TTNFPI+NY KE++EMKHMT+QEF+A++RRKSSGFSRGAS+YRGVTRHHQ GRWQARIGRVAGNKDLYLGTF+TEEEAAEAYDIAAIKFRG+NAVTNF+M+RYDV+AI++S LPI GGAAKRLK + +S +++ ++
Sbjct: 247 AVETSDCSNKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWNATATTNFPITNYSKEVEEMKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDVEAIMKS-ALPI-GGAAKRLKLSLEAAASSEQKPILG 465
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: CRL5_ORYSJ (AP2-like ethylene-responsive transcription factor CRL5 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL5 PE=2 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 1.972e-105 Identity = 162/220 (73.64%), Postives = 183/220 (83.18%), Query Frame = 1 Query: 403 CETSGENSTNTVEAAP-------------------RRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTL 1005
C T+GE V AA R+++DTFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+RKGRQGGYD EEKAARAYDLAALKYWG ST NFP+ +Y++EL+EMK+MTRQE+VA +RRKSSGFSRGASMYRGVTRHHQHGRWQARIGRV+GNKDLYLGTFST+EEAAEAYD+AAIKFRGLNAVTNFD++RYDV I+ SNTL
Sbjct: 241 CITAGEYGMAAVAAADGGRKRGGAGGGGQKQPVHHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVSGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDITRYDVDKIMASNTL 460
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: AIL7_ARATH (AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana OX=3702 GN=AIL7 PE=2 SV=2) HSP 1 Score: 327.02 bits (837), Expect = 6.521e-105 Identity = 163/211 (77.25%), Postives = 192/211 (91.00%), Query Frame = 1 Query: 433 TVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALE 1056
T + + ++ ++T GQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ+RKGRQ GGYDKE++AARAYDLAALKYWG++ TTNFP+S+Y KEL+EM HMT+QEF+A++RRKSSGFSRGAS+YRGVTRHHQ GRWQARIGRVAGNKDLYLGTF+TEEEAAEAYDIAAIKFRG+NAVTNF+M+RYD++A++ S +LP+GG AAKR K ALE
Sbjct: 213 TSDDSKKKIVETLGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDRAARAYDLAALKYWGSTATTNFPVSSYSKELEEMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDIEAVMNS-SLPVGGAAAKRHKLKLALE 422
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Match: AIL1_ARATH (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana OX=3702 GN=AIL1 PE=2 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.644e-104 Identity = 164/241 (68.05%), Postives = 193/241 (80.08%), Query Frame = 1 Query: 343 NANSNLQSLTLSMGSGKDSTCETS-----------GENSTNTV------EAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTXXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTL 1005
N N ++ SL LS G+ D E++ E V E+ PR+++D++GQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+R+GRQ GGYD+EEKAARAYDLAALKYWG +T NFP+SNYEKE++E+ +M RQEFVA +RR SSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFST+EEAAEAYDIAAIKFRGLNAVTNFD++RYDVK I S+T+
Sbjct: 158 NTNGSMLSLALSHGACSDLINESNVSARVEEPVKVDEKRKRLVVKPQVKESVPRKSVDSYGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRRGRQVYLGGYDEEEKAARAYDLAALKYWGPTTHLNFPLSNYEKEIEELNNMNRQEFVAMLRRNSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDINRYDVKRICSSSTI 398 The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan08g161200 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g161200; organism=Vigna angularis; type=mRNA; length=2833bpback to top protein sequence of LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1 >LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=542bpback to top mRNA from alignment at Chr_8-CM003378.1:26284603..26287435+ Legend: polypeptidestart_codonexonCDSintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g161200; organism=Vigna angularis; type=mRNA; length=2833bp; location=Sequence derived from: Chr_8-CM003378.1:26284603..26287435+ (Vigna angularisback to top Coding sequence (CDS) from alignment at Chr_8-CM003378.1:26284603..26287435+ >LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g161200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g161200; organism=Vigna angularis; type=CDS; length=1629bp; location=Sequence derived from: Chr_8-CM003378.1:26284603..26287435+ (Vigna angularisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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