LR48_mrnaVigan09g027800

Transcript Overview
NameLR48_mrnaVigan09g027800
Unique NameLR48_mrnaVigan09g027800_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length2488
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_9-CM003379.1supercontigChr_9-CM003379.1:3162730..3165217 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR186Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR201Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR205Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR213Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR224Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR231Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL010Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasL074Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR106Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR110Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR113Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0092Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0307Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0363Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0416Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0598Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0819Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0822Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0971Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1060Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR252Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR273Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR309Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0380Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR223Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR233Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR272Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR281Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR191Pisum sativum Cameor genome v1aPisum sativum
aspsR219Pisum sativum Cameor genome v1aPisum sativum
aspsR232Pisum sativum Cameor genome v1aPisum sativum
aspvR175Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR179Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR200Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR251Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR139Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR142Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR157Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR198Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR203Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR204Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR188Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR198Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR207Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR217Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR226Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR191Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR200Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR212Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR221Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR232Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR148Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR153Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR157Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR164Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR185Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR206Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR238Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR241Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR251Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR133Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR136Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR142Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR183Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR195Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR173Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR188Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR194Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR200Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR214Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat6g006360.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_17051Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Tiffany.R1.3g190880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_019240Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_10772Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_004499150.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.009G013100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_08659.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr09.1274Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.3g233880.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg35141.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_12367Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.001G010600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun09g249500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_07755.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr08.613.1.6211316eVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014644493.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan09g027800gene-LR48_Vigan09g027800_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g027800LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3162730..3162732LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3162730..3162732Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3162730..3162765LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3162730..3162765Vigna angularisexon
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3163375..3163516LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3163375..3163516Vigna angularisexon
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164307..3164454LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164307..3164454Vigna angularisexon
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164530..3164605LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164530..3164605Vigna angularisexon
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164693..3164804LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164693..3164804Vigna angularisexon
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164918..3165009LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164918..3165009Vigna angularisexon
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3165173..3165217LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3165173..3165217Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3162766..3163374LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3162766..3163374Vigna angularisintron
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3163517..3164306LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3163517..3164306Vigna angularisintron
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164455..3164529LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164455..3164529Vigna angularisintron
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164606..3164692LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164606..3164692Vigna angularisintron
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164805..3164917LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3164805..3164917Vigna angularisintron
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3165010..3165172LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3165010..3165172Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS19847CDS19847_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3165215..3165217LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3165215..3165217Vigna angularisstop_codon


Homology
[Close]
BLAST of LR48_mrnaVigan09g027800 vs. DB:Swiss
Match: GID8_NEMVE (Glucose-induced degradation protein 8 homolog OS=Nematostella vectensis OX=45351 GN=v1g247787 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.464e-27
Identity = 62/169 (36.69%), Postives = 95/169 (56.21%), Query Frame = 1 
Query:   10 EVSTKVETLAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEP-KYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAIL 513
            E   K+  L     +++ +++ YL+   YKE+ E F   +GT QP   L+ +D R +I     +G+  +A+ +T +L  DIL+ N+ L F L     +EL+  +    A+EFAQ +    G+E  +Y+E+LE  MALLA+  PE+SP   LL    RQ+VA  LN AIL
Sbjct:   11 EWMEKIGKLRFQRAEMNRLIMDYLVTEGYKEAAEKFRIESGT-QPTAPLDSLDDRIKIREAVQKGDLEQAVSMTNKLNPDILDSNQQLYFHLQQQRLIELIREKDIEAAVEFAQGQFSEQGQESGRYLEELEQTMALLAFDNPEESPFGDLLHTSQRQKVASELNAAIL 178
[Close]
BLAST of LR48_mrnaVigan09g027800 vs. DB:Swiss
Match: GID8_CHICK (Glucose-induced degradation protein 8 homolog OS=Gallus gallus OX=9031 GN=GID8 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.368e-25
Identity = 61/173 (35.26%), Postives = 102/173 (58.96%), Query Frame = 1 
Query:   10 EVSTKVETLAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKY-MEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLN 525
            E   K+  L I   D++ ++++YL+   +KE+ E F   +G  +P+  LE +D+R +I    L+G   +AI L   L  ++L+ N+ L F L   H +EL+  R+   ALEFAQT+L   G+E +  + ++E  +ALLA+  PE+SP   LL++  RQ+V   +N+A+L + N
Sbjct:   14 EWMEKLNNLHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQIQEAISLINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYEN 185
[Close]
BLAST of LR48_mrnaVigan09g027800 vs. DB:Swiss
Match: GID8_BOVIN (Glucose-induced degradation protein 8 homolog OS=Bos taurus OX=9913 GN=GID8 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.668e-25
Identity = 60/173 (34.68%), Postives = 101/173 (58.38%), Query Frame = 1 
Query:   10 EVSTKVETLAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKY-MEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLN 525
            E   K+  L +   D++ ++++YL+   +KE+ E F   +G  +P+  LE +D+R +I    L+G   +AI L   L  ++L+ N+ L F L   H +EL+  R+   ALEFAQT+L   G+E +  + ++E  +ALLA+  PE SP   LL++  RQ+V   +N+A+L + N
Sbjct:   14 EWMEKLNNLHVQRADMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDNPEDSPFGDLLNMMQRQKVWSEVNQAVLDYEN 185
[Close]
BLAST of LR48_mrnaVigan09g027800 vs. DB:Swiss
Match: GID8_MOUSE (Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.146e-25
Identity = 60/173 (34.68%), Postives = 101/173 (58.38%), Query Frame = 1 
Query:   10 EVSTKVETLAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKY-MEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLN 525
            E   K+  L +   D++ ++++YL+   +KE+ E F   +G  +P+  LE +D+R +I    L+G   +AI L   L  ++L+ N+ L F L   H +EL+  R+   ALEFAQT+L   G+E +  + ++E  +ALLA+  PE+SP   LL +  RQ+V   +N+A+L + N
Sbjct:   14 EWMEKLNNLHVQRADMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDSPEESPFGDLLHMMQRQKVWSEVNQAVLDYEN 185
[Close]
BLAST of LR48_mrnaVigan09g027800 vs. DB:Swiss
Match: GID8B_DANRE (Glucose-induced degradation protein 8-B homolog OS=Danio rerio OX=7955 GN=gid8b PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.009e-24
Identity = 59/173 (34.10%), Postives = 102/173 (58.96%), Query Frame = 1 
Query:   10 EVSTKVETLAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKY-MEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLN 525
            E   K+  + I   D++ ++++YL+   +KE+ E F   +G  +P+  L+ +D+R +I    L+G   +AI L   L  ++L+ N+ L F L   H +EL+  R+   ALEFAQT+L   G+E +  + ++E  +ALLA+  PE+SP   LL++  RQ+V   +N+A+L + N
Sbjct:   15 EWMEKLNNVHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLDSLDERIKIREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYEN 186
[Close]
BLAST of LR48_mrnaVigan09g027800 vs. DB:Swiss
Match: GID8_HUMAN (Glucose-induced degradation protein 8 homolog OS=Homo sapiens OX=9606 GN=GID8 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.029e-24
Identity = 60/173 (34.68%), Postives = 100/173 (57.80%), Query Frame = 1 
Query:   10 EVSTKVETLAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKY-MEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLN 525
            E   K+  L +   D++ ++++YL+   +KE+ E F   +G  +P+  LE +D+R +I    L+G   +AI L   L  ++L+ N+ L F L   H +EL+  R+   ALEFAQT+L   G+E +  + ++E  +ALLA+  PE+SP   LL    RQ+V   +N+A+L + N
Sbjct:   14 EWMEKLNNLHVQRADMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDSPEESPFGDLLHTMQRQKVWSEVNQAVLDYEN 185
[Close]
BLAST of LR48_mrnaVigan09g027800 vs. DB:Swiss
Match: GID8A_DANRE (Glucose-induced degradation protein 8-A homolog OS=Danio rerio OX=7955 GN=gid8a PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.675e-24
Identity = 58/173 (33.53%), Postives = 101/173 (58.38%), Query Frame = 1 
Query:   10 EVSTKVETLAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKY-MEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLN 525
            E   K+  + I   D++ ++++YL+   +KE+ E F   +G +   D L+ +D+R +I    L+G   +AI L   L  ++L+ N+ L F L   H +EL+  R+   ALEFAQ++L   G+E +  + ++E  +ALLA+  PE+SP   LL++  RQ+V   +N+A+L + N
Sbjct:   14 EWMDKLNNVHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPNVD-LDSLDERIKIREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFAQSQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYEN 185
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BLAST of LR48_mrnaVigan09g027800 vs. DB:Swiss
Match: GID8_ARATH (Protein GID8 homolog OS=Arabidopsis thaliana OX=3702 GN=GID8 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.795e-20
Identity = 59/187 (31.55%), Postives = 99/187 (52.94%), Query Frame = 1 
Query:   10 EVSTKVETLAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPK-YMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAIL---AHLNLPRYTAMERLI 558
            E   K+  + +   D++++V+++L+   Y E+ E F   +GTK   D L  +  R  +      GN   AIE    L  +IL+ N +L F L     +EL+   K  EALEFAQ +L P G+E + ++E+LE  +ALL + +    P+  LL L +R + A  +N AIL   +H   P+  ++ +++
Sbjct:   29 EWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPKLPSLLKML 214
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BLAST of LR48_mrnaVigan09g027800 vs. DB:Swiss
Match: GID8_DICDI (Glucose-induced degradation protein 8 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0279265 PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.458e-19
Identity = 57/169 (33.73%), Postives = 91/169 (53.85%), Query Frame = 1 
Query:   10 EVSTKVETLAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKE-PKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAIL 513
            E   K+  + I+ +D++ +V++YL+   Y+E+   F   + T+   D L  +  R  I      G+  K IE+   L  +IL+ N  L F L     +EL+      EAL+FAQ +L P G+E  K++E+LE  ++LL +++  KSP+  LL    RQ+ A  LN AIL
Sbjct:   18 EWDDKLAEVNISKSDLNKLVMNYLVIEGYQEAAAKFQEESSTQTTVD-LASIADRMAIRSAIQCGDVEKGIEIVNDLNPEILDTNPQLYFHLQQQKLIELIRKGMTAEALKFAQDELAPQGEENNKFLEELEKTISLLVFEDTAKSPLSSLLDHSQRQKTAGELNSAIL 185
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BLAST of LR48_mrnaVigan09g027800 vs. DB:Swiss
Match: RANBM_ARATH (Ran-binding protein M homolog OS=Arabidopsis thaliana OX=3702 GN=RANBPM PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.239e-12
Identity = 58/222 (26.13%), Postives = 111/222 (50.00%), Query Frame = 1 
Query:   25 VETLAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPADYLED------------MDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLH-FVELVCSRKCTEALEFAQTKLGPFGKEPKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILA------------HLNLPRYTAMERLIQQATVV---RQCLSQEAGK 606
            +E ++I  N  + +V +YL+H  Y+E++++F  +T    P  +++             + +RK +      G    A+   ++L   I++ +K +   LL    F+ELV   K  E + + + +L  F     + + +ED  ALLAY++PE+S +++ L    R+ VAD++N AIL+            HL     + +E+L++Q TV    R+ L+ + G+
Sbjct:  238 IEKISIPPNIGYGLVKTYLLHYGYEETLDAFNLATKNTVPPIHIDQENAIDEDDSSYALKQRKNLRQLVRNGEIDTALAELQKLYPQIVQDDKSVVCFLLHCQKFIELVRVGKLEEGVNYGRLELAKFVGLTGFQDIVEDCFALLAYEKPEESSVWYFLEDSQRELVADAVNAAILSTNPNKKDVQRSCHLQ----SHLEKLLRQLTVCCLERRSLNGDQGE 455
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan09g027800 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
GID8_NEMVE8.464e-2736.69Glucose-induced degradation protein 8 homolog OS=N... [more]
GID8_CHICK1.368e-2535.26Glucose-induced degradation protein 8 homolog OS=G... [more]
GID8_BOVIN4.668e-2534.68Glucose-induced degradation protein 8 homolog OS=B... [more]
GID8_MOUSE6.146e-2534.68Glucose-induced degradation protein 8 homolog OS=M... [more]
GID8B_DANRE2.009e-2434.10Glucose-induced degradation protein 8-B homolog OS... [more]
GID8_HUMAN2.029e-2434.68Glucose-induced degradation protein 8 homolog OS=H... [more]
GID8A_DANRE9.675e-2433.53Glucose-induced degradation protein 8-A homolog OS... [more]
GID8_ARATH6.795e-2031.55Protein GID8 homolog OS=Arabidopsis thaliana OX=37... [more]
GID8_DICDI3.458e-1933.73Glucose-induced degradation protein 8 homolog OS=D... [more]
RANBM_ARATH2.239e-1226.13Ran-binding protein M homolog OS=Arabidopsis thali... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006595CTLH, C-terminal LisH motifSMARTSM00668ctlhcoord: 54..111
e-value: 2.0E-10
score: 50.7
IPR006595CTLH, C-terminal LisH motifPROSITEPS50897CTLHcoord: 54..111
score: 12.414
IPR013144CRA domainSMARTSM00757toby_final6coord: 107..202
e-value: 6.8E-30
score: 115.3
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 55..193
e-value: 1.3E-32
score: 112.6
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 15..47
score: 8.588

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g027800; organism=Vigna angularis; type=mRNA; length=2488bp
ATGCTTATTGAGGTCTCCACTAAAGTGGAGACCCTGGTGAGTAGTTGTCT
TGTGgatattaataatatgttttgttttgcgATAAATGATTTCTTACTCT
CTGGGAAACTCTTCGAATAATTAGTTTCTGAAAGATATTTCCCAACCCTA
ATTTCTCATGGTAGAAAATTGAACAGAAGAGGGATTGGAAAcacaaatgt
aatatttattctGCCCTGTATACTCTATATTTCTCTCACACGAATTACTA
CTAATATGCGTTTTGATTCTGGTGATTCAAAACTTTTCCctcaaatttat
gtttaaaagaGAATGTAATTAATCCTCTGTGGGTTATTTGAATGGATAAG
GCGTGATTTTGCATGACTGTGTCTTTCAAACCGTCACTCTTTTCTTTGGG
ATGAAATGAAATATTGTTCCTCGTTAAGTGTCTTTGCGTCTAGAGACTTC
ACCTGTCTTGGATTTGGATTTGGGCGTCATCCCCTCCTcctaatttttat
atacaaaagaaaaagaattgagCTAAGATTGAACCTTGTAGTATGTTTTG
GTGGGTTTCTATTTTTGAATGGTTGATTTTCTGGTTCCATTGATTCTCTT
ACTGAAATTAATCCATCATTTTTTCTTGGTTACTTGAATTTACAGGCTAT
AAATGATAATGACATCCACAGTGTTGTTCTGTCATATCTCATACACAATT
GCTACAAAGAATCGGTAGAATCATTCATTACTAGCACTGGGACAAAGCAG
CCTGCAGATTATTTGGAGGACATGGACAAAAGGAAAAGTAGGTTTATGGT
TATTTTTTGGTACACAAAATTCcttcaagatttttttttgggtGTTTTCT
GGTTATACTTTATTTGCTTGCTTATCCTAGAATTTTGTGTGTACACTAAG
TGTTCATTCATAACAACttttaagaaattttcaaaTCTAAATGCACGTTG
TCAACCCCAACACGAGGGATGCTGAACTGTTGTTCGCTTTAATACTACTT
AAAACATCTGTGATTCTTATTCTTTAGACGACTTTTGACTTCTGTCTTGA
AATACATTTGAATTTTGATTAGACCTTTTTTGTTTATGGTGTCAGTTCCT
GAAACTTGGAGTGAATCTGGTTTTGGTTCCTTAAATTTAAAAGAGTGAAT
CTGGTTCATTTTAATCActcaaatttagaaaaaaagtggttttagtccct
aaacaCTAAATTAGAGGAACTAAAAACAACCTTAAACAAACATTTTATGT
CTTTCAAATTTAGTATTTAGgcataaaactatatttttgaaaattttgag
gGGCTAAAAGAACTTTTGTAAGTTTGGAGGATTACAATGAGATTTGTCCT
AaattttagagactaaaaacatatttaagtctACTTTCTTTCTTGCAGAT
CTTTTTTACTATGTAAAGACATCTCTATTGAGCTTCGATTGACattttaa
gatatattactGTGCCACAAACTGTGCTGGGAAATTCTCCACACACTTAC
GAAGATAATTAGGCTTTTTATTggatcttattattattaatgaaaacacT
TCatgataaatttcattttttctttaggAATCTTTCACTTTGCACTAGAG
GGAAATGCACTCAAGGCCATTGAGCTTACTGAGCAGCTAGCACAGGATAT
TTTAGAGAAGAATAAGGATTTGCAGTTTGATCTACTAAGCCTTCATTTTG
TTGAGCTTGTGTGCTCCAGGAAATGGTaagcataatttaattttgtctcT
CAAAGAACCTGTAGACTTCctactttcatatattttcattttattggcAG
CACAGAAGCTTTGGAGTTTGCTCAGACCAAGCTGGGCCCTTTTGGAAAGG
AGCCCAAATATATGGAAAAACTTGAAGTATGTCTGGATTTCACATAGCTT
TTTTGTGATGTATGTGTGTGACCGTGTGTGCTTAAGATTGAATTTTTGTT
ATGGTACCGGCAGGATTTTATGGCCCTTCTTGCTTATAAGGAGCCAGAGA
AATCCCCAATGTTTCATCTCCTTAGCTTAGAGTATCGGCAGCAGGTTGCA
GATAGTTTGAATCGGGCTATTCTTGGTTGGTTAACTTGTTATCTGCatct
ttctttaatatattttgttgcaAATCATGGTGCTTTTTCTTATCCAtgtt
taatgtgattttttctGTGATGGTTGGGTAATTGGCAGCACACTTGAATC
TTCCCAGATACACAGCAATGGAGAGGCTAATACAGCAGGCTACAGTTGTT
AGACAATGCTTAAGTCAAGAAGCGGGCAAGGTAATGGGTGTTGCTTATGA
AATTTAAGAATTGATGCAAAGTTCTGTCTAACCTGCAAAATCTTGGATTG
CTCATCTCTTCTTGGACCAGTAAAAGGAGATGTAGCCAGCTACTATAGTA
TGCAATATTGGTGTTCGAGCTGATTCTTTCATTATCATTGCAGGATGGGC
CTCCACCATTTTCCTTAAAGGATTTTCTCAAAAGTTGA
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protein sequence of LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1

>LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=216bp
MLIEVSTKVETLAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPAD
YLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHF
VELVCSRKCTEALEFAQTKLGPFGKEPKYMEKLEDFMALLAYKEPEKSPM
FHLLSLEYRQQVADSLNRAILAHLNLPRYTAMERLIQQATVVRQCLSQEA
GKDGPPPFSLKDFLKS
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mRNA from alignment at Chr_9-CM003379.1:3162730..3165217+

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g027800; organism=Vigna angularis; type=mRNA; length=2488bp; location=Sequence derived from: Chr_9-CM003379.1:3162730..3165217+ (Vigna angularis
ATGCTTATTGAGGTCTCCACTAAAGTGGAGACCCTGGTGAGTAGTTGTCT
TGTGgatattaataatatgttttgttttgcgATAAATGATTTCTTACTCT
CTGGGAAACTCTTCGAATAATTAGTTTCTGAAAGATATTTCCCAACCCTA
ATTTCTCATGGTAGAAAATTGAACAGAAGAGGGATTGGAAAcacaaatgt
aatatttattctGCCCTGTATACTCTATATTTCTCTCACACGAATTACTA
CTAATATGCGTTTTGATTCTGGTGATTCAAAACTTTTCCctcaaatttat
gtttaaaagaGAATGTAATTAATCCTCTGTGGGTTATTTGAATGGATAAG
GCGTGATTTTGCATGACTGTGTCTTTCAAACCGTCACTCTTTTCTTTGGG
ATGAAATGAAATATTGTTCCTCGTTAAGTGTCTTTGCGTCTAGAGACTTC
ACCTGTCTTGGATTTGGATTTGGGCGTCATCCCCTCCTcctaatttttat
atacaaaagaaaaagaattgagCTAAGATTGAACCTTGTAGTATGTTTTG
GTGGGTTTCTATTTTTGAATGGTTGATTTTCTGGTTCCATTGATTCTCTT
ACTGAAATTAATCCATCATTTTTTCTTGGTTACTTGAATTTACAGGCTAT
AAATGATAATGACATCCACAGTGTTGTTCTGTCATATCTCATACACAATT
GCTACAAAGAATCGGTAGAATCATTCATTACTAGCACTGGGACAAAGCAG
CCTGCAGATTATTTGGAGGACATGGACAAAAGGAAAAGTAGGTTTATGGT
TATTTTTTGGTACACAAAATTCcttcaagatttttttttgggtGTTTTCT
GGTTATACTTTATTTGCTTGCTTATCCTAGAATTTTGTGTGTACACTAAG
TGTTCATTCATAACAACttttaagaaattttcaaaTCTAAATGCACGTTG
TCAACCCCAACACGAGGGATGCTGAACTGTTGTTCGCTTTAATACTACTT
AAAACATCTGTGATTCTTATTCTTTAGACGACTTTTGACTTCTGTCTTGA
AATACATTTGAATTTTGATTAGACCTTTTTTGTTTATGGTGTCAGTTCCT
GAAACTTGGAGTGAATCTGGTTTTGGTTCCTTAAATTTAAAAGAGTGAAT
CTGGTTCATTTTAATCActcaaatttagaaaaaaagtggttttagtccct
aaacaCTAAATTAGAGGAACTAAAAACAACCTTAAACAAACATTTTATGT
CTTTCAAATTTAGTATTTAGgcataaaactatatttttgaaaattttgag
gGGCTAAAAGAACTTTTGTAAGTTTGGAGGATTACAATGAGATTTGTCCT
AaattttagagactaaaaacatatttaagtctACTTTCTTTCTTGCAGAT
CTTTTTTACTATGTAAAGACATCTCTATTGAGCTTCGATTGACattttaa
gatatattactGTGCCACAAACTGTGCTGGGAAATTCTCCACACACTTAC
GAAGATAATTAGGCTTTTTATTggatcttattattattaatgaaaacacT
TCatgataaatttcattttttctttaggAATCTTTCACTTTGCACTAGAG
GGAAATGCACTCAAGGCCATTGAGCTTACTGAGCAGCTAGCACAGGATAT
TTTAGAGAAGAATAAGGATTTGCAGTTTGATCTACTAAGCCTTCATTTTG
TTGAGCTTGTGTGCTCCAGGAAATGGTaagcataatttaattttgtctcT
CAAAGAACCTGTAGACTTCctactttcatatattttcattttattggcAG
CACAGAAGCTTTGGAGTTTGCTCAGACCAAGCTGGGCCCTTTTGGAAAGG
AGCCCAAATATATGGAAAAACTTGAAGTATGTCTGGATTTCACATAGCTT
TTTTGTGATGTATGTGTGTGACCGTGTGTGCTTAAGATTGAATTTTTGTT
ATGGTACCGGCAGGATTTTATGGCCCTTCTTGCTTATAAGGAGCCAGAGA
AATCCCCAATGTTTCATCTCCTTAGCTTAGAGTATCGGCAGCAGGTTGCA
GATAGTTTGAATCGGGCTATTCTTGGTTGGTTAACTTGTTATCTGCatct
ttctttaatatattttgttgcaAATCATGGTGCTTTTTCTTATCCAtgtt
taatgtgattttttctGTGATGGTTGGGTAATTGGCAGCACACTTGAATC
TTCCCAGATACACAGCAATGGAGAGGCTAATACAGCAGGCTACAGTTGTT
AGACAATGCTTAAGTCAAGAAGCGGGCAAGGTAATGGGTGTTGCTTATGA
AATTTAAGAATTGATGCAAAGTTCTGTCTAACCTGCAAAATCTTGGATTG
CTCATCTCTTCTTGGACCAGTAAAAGGAGATGTAGCCAGCTACTATAGTA
TGCAATATTGGTGTTCGAGCTGATTCTTTCATTATCATTGCAGGATGGGC
CTCCACCATTTTCCTTAAAGGATTTTCTCAAAAGTTGA
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Coding sequence (CDS) from alignment at Chr_9-CM003379.1:3162730..3165217+

>LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g027800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g027800; organism=Vigna angularis; type=CDS; length=651bp; location=Sequence derived from: Chr_9-CM003379.1:3162730..3165217+ (Vigna angularis
ATGCTTATTGAGGTCTCCACTAAAGTGGAGACCCTGGCTATAAATGATAA
TGACATCCACAGTGTTGTTCTGTCATATCTCATACACAATTGCTACAAAG
AATCGGTAGAATCATTCATTACTAGCACTGGGACAAAGCAGCCTGCAGAT
TATTTGGAGGACATGGACAAAAGGAAAAgAATCTTTCACTTTGCACTAGA
GGGAAATGCACTCAAGGCCATTGAGCTTACTGAGCAGCTAGCACAGGATA
TTTTAGAGAAGAATAAGGATTTGCAGTTTGATCTACTAAGCCTTCATTTT
GTTGAGCTTGTGTGCTCCAGGAAATGCACAGAAGCTTTGGAGTTTGCTCA
GACCAAGCTGGGCCCTTTTGGAAAGGAGCCCAAATATATGGAAAAACTTG
AAGATTTTATGGCCCTTCTTGCTTATAAGGAGCCAGAGAAATCCCCAATG
TTTCATCTCCTTAGCTTAGAGTATCGGCAGCAGGTTGCAGATAGTTTGAA
TCGGGCTATTCTTGCACACTTGAATCTTCCCAGATACACAGCAATGGAGA
GGCTAATACAGCAGGCTACAGTTGTTAGACAATGCTTAAGTCAAGAAGCG
GGCAAGGATGGGCCTCCACCATTTTCCTTAAAGGATTTTCTCAAAAGTTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006595CTLH_C
IPR013144CRA_dom
IPR024964CTLH/CRA
IPR006594LisH
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding