LR48_mrnaVigan09g028900

Transcript Overview
NameLR48_mrnaVigan09g028900
Unique NameLR48_mrnaVigan09g028900_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length1085
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_9-CM003379.1supercontigChr_9-CM003379.1:3290928..3292012 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR186Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR201Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR205Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR213Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR224Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR231Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL010Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasL074Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR106Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR110Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR113Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0092Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0307Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0363Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0416Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0540Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0598Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0819Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0822Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0971Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1060Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR252Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR273Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR309Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0293Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0374Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR223Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR249Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR272Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR281Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR191Pisum sativum Cameor genome v1aPisum sativum
aspsR203Pisum sativum Cameor genome v1aPisum sativum
aspsR216Pisum sativum Cameor genome v1aPisum sativum
aspsR219Pisum sativum Cameor genome v1aPisum sativum
aspsR232Pisum sativum Cameor genome v1aPisum sativum
aspvR175Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR179Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR187Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR200Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR251Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR139Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR142Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR157Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR198Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR203Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR204Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR188Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR198Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR207Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR217Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR226Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR191Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR200Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR212Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR221Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR232Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR148Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR153Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR157Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR164Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR174Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR185Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR206Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR238Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR241Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR251Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR133Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR136Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR142Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR183Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR195Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR173Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR188Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR194Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR200Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR214Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.011G040800.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun09g268800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_027335365.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_014647982.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014638174.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014644800.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr11.1676Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_17317Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_004500723.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004499156.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_07761.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun09g250600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr08.619.1.6211316eVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.2g219840.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_04758Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun08g010600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_15819.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun11g179700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_08665.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Phvul.009G014100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr09.1264Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.001G009700.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_15412Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat6g005440.1Pisum sativum Cameor genome v1aPisum sativum
Psat5g013840.1Pisum sativum Cameor genome v1aPisum sativum
Ca_10766Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.3g234480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g191240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Tiffany.R1.2g176320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_033650Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_31033Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg35129.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan08g176100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
LR48_mrnaVigan07g282200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan09g028900gene-LR48_Vigan09g028900_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g028900LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3290928..3290930LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3290928..3290930Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3290928..3291113LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3290928..3291113Vigna angularisexon
LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3291224..3291619LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3291224..3291619Vigna angularisexon
LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3291767..3292012LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3291767..3292012Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3291114..3291223LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3291114..3291223Vigna angularisintron
LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3291620..3291766LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3291620..3291766Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS19857CDS19857_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3292010..3292012LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3292010..3292012Vigna angularisstop_codon


Homology
BLAST of LR48_mrnaVigan09g028900 vs. DB:Swiss
Match: BBX21_ARATH (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.033e-59
Identity = 133/333 (39.94%), Postives = 179/333 (53.75%), Query Frame = 1
Query:    1 MKIQCDVCNEHQASLFCTADEAAICDDCDHRVHHANKLASKHHRFSLTHPSAKHF--PLCDICQEKRAFVFCQQDRAILCKECDVSIHSVNELTKNHSRFLLTGIKFSTSAIPYXXXXXXX---------XXXXXXXKKNPVLDTXXXXXXXXXXXX--XXXXGGNLQTNQEPGFTGSSISEYLINTIPGMKFEDFLDSH-STFDCSKNGDE-----MLSVFGEGN--------------MVSFSSG--GIWVPQAPPSAVAYW--EQMGEQNGYREG--------------------RKGSVRSSLGDDNNFVVPQMSPPS-NVSKKSRFLW 825
            MKI+CDVC++ +AS+FCTADEA++C  CDH+VHHANKLASKH RFSL +PS+ +   PLCDICQ+K+A +FCQQDRAILCK+CD SIH+ NE TK H RFLLTG+K S ++  Y  +S SS         S   ++    P L   L      +         GG+   NQ    + S+ISEYL++T+PG   EDFLDS   T+  SK+GD+      +    + N               VS  S   GIWVPQ P +  + +  +   + N  + G                    ++G       DD  F VPQ++PP  + +KK R  W
Sbjct:    1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKSSSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQ--WGSTSTISEYLMDTLPGWHVEDFLDSSLPTYGFSKSGDDDGVLPYMEPEDDNNTKRNNNNNNNNNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFSQDNNIQFGMYNKETSPEVVSFAPIQNMKQQGQNNKRWYDDGGFTVPQITPPPLSSNKKFRSFW 331          
BLAST of LR48_mrnaVigan09g028900 vs. DB:Swiss
Match: BBX20_ARATH (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.274e-45
Identity = 91/200 (45.50%), Postives = 121/200 (60.50%), Query Frame = 1
Query:    1 MKIQCDVCNEHQASLFCTADEAAICDDCDHRVHHANKLASKHHRFSLTHPSAKHFPLCDICQEKRAFVFCQQDRAILCKECDVSIHSVNELTKNHSRFLLTGIKFSTSAIPYXXXXXXXXXXXXXXKK---------------NPVLDTXXXXXXXXXXXXXXXXGGNLQTNQEPGFTGSSISEYLINTIPGMKFEDFLD 555
            MKI C VC++ +AS+FC ADEAA+C+ CD  VH ANKLA KH RFSLT P+ K  PLCDIC E+RA +FCQ+DRAILC+ECD+ IH  NE TK H+RFLLTG+K S S   Y  +S+S+S+++    K               N V  +S   +         +   ++  +        SISEYL+ T+PG + ED L+
Sbjct:    1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNSAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSGSGSGCTGSISEYLMETLPGWRVEDLLE 200          
BLAST of LR48_mrnaVigan09g028900 vs. DB:Swiss
Match: BBX24_ARATH (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.731e-37
Identity = 64/109 (58.72%), Postives = 78/109 (71.56%), Query Frame = 1
Query:    1 MKIQCDVCNEHQASLFCTADEAAICDDCDHRVHHANKLASKHHRFSLTHPSAKHFPLCDICQEKRAFVFCQQDRAILCKECDVSIHSVNELTKNHSRFLLTGIKFSTSA 327
            MKIQCDVC +  A++ C ADEAA+C  CD  +H ANKLASKH R  L   S K FP CDICQEK AF+FC +DRA+LC++CD SIH  N  + NH RFL TGIK + ++
Sbjct:    1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTK-FPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTS 108          
BLAST of LR48_mrnaVigan09g028900 vs. DB:Swiss
Match: BBX22_ARATH (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 4.240e-36
Identity = 62/110 (56.36%), Postives = 76/110 (69.09%), Query Frame = 1
Query:    1 MKIQCDVCNEHQASLFCTADEAAICDDCDHRVHHANKLASKHHRFSLTHPSAKHFPLCDICQEKRAFVFCQQDRAILCKECDVSIHSVNELTKNHSRFLLTGIKFSTSAI 330
            MKIQC+VC   +A++ C ADEAA+C  CD ++H ANKLA KH R  L+  SA   P CDICQE   F FC QDRA+LC++CDV+IH+VN     H RFLLTGIK    +I
Sbjct:    1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSA-SASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESI 109          
BLAST of LR48_mrnaVigan09g028900 vs. DB:Swiss
Match: BBX25_ARATH (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.886e-35
Identity = 63/109 (57.80%), Postives = 77/109 (70.64%), Query Frame = 1
Query:    1 MKIQCDVCNEHQASLFCTADEAAICDDCDHRVHHANKLASKHHRFSLTHPSAKHFPLCDICQEKRAFVFCQQDRAILCKECDVSIHSVNELTKNHSRFLLTGIKFSTSA 327
            MKIQCDVC +  A+L C ADEAA+C  CD  VH ANKLASKH R  L   S K FP CDIC EK AF+FC +DRA+LC++CD + H+ N  + NH RFL TGI+ + S+
Sbjct:    1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTK-FPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSS 108          
BLAST of LR48_mrnaVigan09g028900 vs. DB:Swiss
Match: BBX23_ARATH (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.551e-29
Identity = 53/115 (46.09%), Postives = 78/115 (67.83%), Query Frame = 1
Query:    1 MKIQCDVCNEHQASLFCTADEAAICDDCDHRVHHANKLASKHHRFSL-----THPSAKHFPLCDICQEKRAFVFCQQDRAILCKECDVSIHSVNELTKNHSRFLLTGIKFSTSAI 330
            MKIQC+VC + +A + C +DEA +C  CD +VH ANKL  +HHR +L     +  +A   PLCDICQE++ + FC +DRA+LC +CD +IH+ N    +H RFLL+G++ S  ++
Sbjct:    1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGAPLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCN----SHQRFLLSGVQVSDQSL 111          
BLAST of LR48_mrnaVigan09g028900 vs. DB:Swiss
Match: BBX19_ARATH (B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.463e-23
Identity = 48/100 (48.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:    1 MKIQCDVCNEHQASLFCTADEAAICDDCDHRVHHANKLASKHHRFSLTHPSAKHFPLCDICQEKRAFVFCQQDRAILCKECDVSIHSVNELTKNHSRFLL 300
            M+I CD C    A +FC ADEAA+C  CD +VH  NKLAS+H R  L  PS  + P CDIC+   AF +C+ D + LC +CD+ +H   + T  H RFLL
Sbjct:    1 MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPS--NAPCCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HGRFLL 96          
BLAST of LR48_mrnaVigan09g028900 vs. DB:Swiss
Match: BBX18_ARATH (B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.312e-21
Identity = 48/100 (48.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:    1 MKIQCDVCNEHQASLFCTADEAAICDDCDHRVHHANKLASKHHRFSLTHPSAKHFPLCDICQEKRAFVFCQQDRAILCKECDVSIHSVNELTKNHSRFLL 300
            M+I CD C    A +FC ADEAA+C  CD +VH  NKLAS+H R  L  PS  + P CDIC+   AF +C+ D + LC +CD+ +H   + T  H RFLL
Sbjct:    1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPS--NAPSCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HRRFLL 96          
BLAST of LR48_mrnaVigan09g028900 vs. DB:Swiss
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.619e-19
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = 1
Query:   13 CDVCNEHQASLFCTADEAAICDDCDHRVHHANKLASKHHRFSLTHPSAKHFPLCDICQEKRAFVFCQQDRAILCKECDVSIHSVNELTKNHSRFLLT 303
            CD C    A+LFC AD A +C DCD ++H ANKLAS+H R            LC++C++  A V C+ D A LC  CD  IHS N L++ H R  +T
Sbjct:    8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVW----------LCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPIT 94          
BLAST of LR48_mrnaVigan09g028900 vs. DB:Swiss
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.674e-17
Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = 1
Query:   13 CDVCNEHQASLFCTADEAAICDDCDHRVHHANKLASKHHRFSLTHPSAKHFPLCDICQEKRAFVFCQQDRAILCKECDVSIHSVNELTKNHSRFLLTGIKFSTSA 327
            CD C    A+L+C  D A +C  CD +VH ANKLAS+H R            +C++C++  A V C+ D A LC  CD  IHS N L + H R  +T    S S+
Sbjct:    6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVW----------MCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSS 100          
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan09g028900 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
BBX21_ARATH3.033e-5939.94B-box zinc finger protein 21 OS=Arabidopsis thalia... [more]
BBX20_ARATH2.274e-4545.50B-box zinc finger protein 20 OS=Arabidopsis thalia... [more]
BBX24_ARATH7.731e-3758.72B-box zinc finger protein 24 OS=Arabidopsis thalia... [more]
BBX22_ARATH4.240e-3656.36B-box zinc finger protein 22 OS=Arabidopsis thalia... [more]
BBX25_ARATH2.886e-3557.80B-box zinc finger protein 25 OS=Arabidopsis thalia... [more]
BBX23_ARATH1.551e-2946.09B-box zinc finger protein 23 OS=Arabidopsis thalia... [more]
BBX19_ARATH3.463e-2348.00B-box zinc finger protein 19 OS=Arabidopsis thalia... [more]
BBX18_ARATH1.312e-2148.00B-box zinc finger protein 18 OS=Arabidopsis thalia... [more]
COL3_ARATH1.619e-1944.33Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis... [more]
COL4_ARATH2.674e-1740.00Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 4..47
e-value: 4.6E-6
score: 36.1
coord: 53..100
e-value: 3.0E-15
score: 66.7
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 56..96
e-value: 2.7E-7
score: 30.5
coord: 4..42
e-value: 8.5E-6
score: 25.7
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 53..100
score: 9.954
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 1..47
score: 10.637
IPR000315B-box-type zinc fingerCDDcd00021BBOXcoord: 56..100
e-value: 1.82692E-10
score: 53.0599
IPR000315B-box-type zinc fingerCDDcd00021BBOXcoord: 3..47
e-value: 1.36933E-8
score: 47.6671
NoneNo IPR availableGENE3D3.30.40.200coord: 1..95
e-value: 5.3E-8
score: 35.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..165

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g028900; organism=Vigna angularis; type=mRNA; length=1085bp
atgaaGATCCAGTGTGATGTCTGTAACGAACACCAGGCTTCTTTATTCTG
CACCGCCGATGAAGCCGCCATCTGCGACGACTGCGACCACCGTGTCCACC
ACGCCAACAAGCTCGCCTCCAAACACCACCGCTTCTCTCTCACCCACCCC
TCTGCTAAGCATTTTCCTCTCTGTGATATTTGCCAGGTACATCAACTAAT
AACAATTATATgttaattactataattattacatCGATATTGTTACTCAT
TATTACATGGTTTAGTTTGAGTTAACGAGTTTGCGTTGTGGTGTAGGAGA
AAAGAGCTTTTGTGTTTTGTCAGCAAGATAGAGCAATTCTGTGCAAAGAG
TGTGACGTGTCCATTCATTCTGTCAACGAACTCACCAAGAACCATAGCAG
GTTTCTTCTCACCGGGATCAAGTTTTCTACTTCCGCCATaccttattctt
cttcttcttcttcatcatcatcatcatcagcagcAGCCAAGAAAAACCCT
GTTCTCGATACTTCACTCCCACCTTCCAATCCTCCTTCAACACCCTCACG
GCCTAAGCCTGGAGGAAACTTGCAAACAAATCAAGAACCTGGTTTTACTG
GTAGCAGCATATCAGAGTACCTGATAAACACTATCCCAGGCATGAAGTTC
GAAGATTTTCTCGATTCCCATTCAACCTTTGATTGCTCTAAGGTTAGTTT
GTTCTGCTTCCAACCTTCCATCAATTAATTGCCGACcatatttagtaata
aaaatgtttcttttttattttacaattgtTGGGGCAACTGATGTTGGTTT
TATTGGATCTGCGATTAACACGTTGATGTTGAATATCAGAATGGTGATGA
GATGTTGTCGGTGTTTGGTGAGGGAAACATGGTTTCGTTCTCCTCTGGTG
GGATCTGGGTTCCTCAAGCGCCACCTTCTGCTGTTGCATACTGGGAACAG
ATGGGTGAGCAGAATGGGTACAGAGAGGGAAGGAAAGGTAGCGTCAGATC
AAGTTTGGGCGATGATAATAATTTCGTAGTTCCTCAGATGAGTCCTCCCA
GCAACGTTTCGAAGAAATCCAGGTTTCTTTGGTAG
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protein sequence of LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1

>LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=275bp
MKIQCDVCNEHQASLFCTADEAAICDDCDHRVHHANKLASKHHRFSLTHP
SAKHFPLCDICQEKRAFVFCQQDRAILCKECDVSIHSVNELTKNHSRFLL
TGIKFSTSAIPYSSSSSSSSSSSAAAKKNPVLDTSLPPSNPPSTPSRPKP
GGNLQTNQEPGFTGSSISEYLINTIPGMKFEDFLDSHSTFDCSKNGDEML
SVFGEGNMVSFSSGGIWVPQAPPSAVAYWEQMGEQNGYREGRKGSVRSSL
GDDNNFVVPQMSPPSNVSKKSRFLW
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mRNA from alignment at Chr_9-CM003379.1:3290928..3292012+

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g028900; organism=Vigna angularis; type=mRNA; length=1085bp; location=Sequence derived from: Chr_9-CM003379.1:3290928..3292012+ (Vigna angularis
atgaaGATCCAGTGTGATGTCTGTAACGAACACCAGGCTTCTTTATTCTG CACCGCCGATGAAGCCGCCATCTGCGACGACTGCGACCACCGTGTCCACC ACGCCAACAAGCTCGCCTCCAAACACCACCGCTTCTCTCTCACCCACCCC TCTGCTAAGCATTTTCCTCTCTGTGATATTTGCCAGGTACATCAACTAAT AACAATTATATgttaattactataattattacatCGATATTGTTACTCAT TATTACATGGTTTAGTTTGAGTTAACGAGTTTGCGTTGTGGTGTAGGAGA AAAGAGCTTTTGTGTTTTGTCAGCAAGATAGAGCAATTCTGTGCAAAGAG TGTGACGTGTCCATTCATTCTGTCAACGAACTCACCAAGAACCATAGCAG GTTTCTTCTCACCGGGATCAAGTTTTCTACTTCCGCCATaccttattctt cttcttcttcttcatcatcatcatcatcagcagcAGCCAAGAAAAACCCT GTTCTCGATACTTCACTCCCACCTTCCAATCCTCCTTCAACACCCTCACG GCCTAAGCCTGGAGGAAACTTGCAAACAAATCAAGAACCTGGTTTTACTG GTAGCAGCATATCAGAGTACCTGATAAACACTATCCCAGGCATGAAGTTC GAAGATTTTCTCGATTCCCATTCAACCTTTGATTGCTCTAAGGTTAGTTT GTTCTGCTTCCAACCTTCCATCAATTAATTGCCGACcatatttagtaata aaaatgtttcttttttattttacaattgtTGGGGCAACTGATGTTGGTTT TATTGGATCTGCGATTAACACGTTGATGTTGAATATCAGAATGGTGATGA GATGTTGTCGGTGTTTGGTGAGGGAAACATGGTTTCGTTCTCCTCTGGTG GGATCTGGGTTCCTCAAGCGCCACCTTCTGCTGTTGCATACTGGGAACAG ATGGGTGAGCAGAATGGGTACAGAGAGGGAAGGAAAGGTAGCGTCAGATC AAGTTTGGGCGATGATAATAATTTCGTAGTTCCTCAGATGAGTCCTCCCA GCAACGTTTCGAAGAAATCCAGGTTTCTTTGGTAG
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Coding sequence (CDS) from alignment at Chr_9-CM003379.1:3290928..3292012+

>LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g028900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g028900; organism=Vigna angularis; type=CDS; length=828bp; location=Sequence derived from: Chr_9-CM003379.1:3290928..3292012+ (Vigna angularis
atgaaGATCCAGTGTGATGTCTGTAACGAACACCAGGCTTCTTTATTCTG
CACCGCCGATGAAGCCGCCATCTGCGACGACTGCGACCACCGTGTCCACC
ACGCCAACAAGCTCGCCTCCAAACACCACCGCTTCTCTCTCACCCACCCC
TCTGCTAAGCATTTTCCTCTCTGTGATATTTGCCAGGAGAAAAGAGCTTT
TGTGTTTTGTCAGCAAGATAGAGCAATTCTGTGCAAAGAGTGTGACGTGT
CCATTCATTCTGTCAACGAACTCACCAAGAACCATAGCAGGTTTCTTCTC
ACCGGGATCAAGTTTTCTACTTCCGCCATaccttattcttcttcttcttc
ttcatcatcatcatcatcagcagcAGCCAAGAAAAACCCTGTTCTCGATA
CTTCACTCCCACCTTCCAATCCTCCTTCAACACCCTCACGGCCTAAGCCT
GGAGGAAACTTGCAAACAAATCAAGAACCTGGTTTTACTGGTAGCAGCAT
ATCAGAGTACCTGATAAACACTATCCCAGGCATGAAGTTCGAAGATTTTC
TCGATTCCCATTCAACCTTTGATTGCTCTAAGAATGGTGATGAGATGTTG
TCGGTGTTTGGTGAGGGAAACATGGTTTCGTTCTCCTCTGGTGGGATCTG
GGTTCCTCAAGCGCCACCTTCTGCTGTTGCATACTGGGAACAGATGGGTG
AGCAGAATGGGTACAGAGAGGGAAGGAAAGGTAGCGTCAGATCAAGTTTG
GGCGATGATAATAATTTCGTAGTTCCTCAGATGAGTCCTCCCAGCAACGT
TTCGAAGAAATCCAGGTTTCTTTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding