rna-XM_014655683.2

Transcript Overview
Namerna-XM_014655683.2
Unique Namerna-XM_014655683.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length441
Productprobable prefoldin subunit 2, transcript variant X2
References
External references for this mRNA
DatabaseAccession
GeneID106769889
GenbankXM_014655683.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr08chromosomechr08:25730491..25735422 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL369Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0657Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0806Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1114Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1173Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL307Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL390Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL240Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL339Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0256Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0700Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL282Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL376Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvrvL067Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL591Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL385Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL608Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL142Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL400Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL615Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR754Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR772Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR811Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR625Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR654Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR544Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR675Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR587Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR575Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuaR600Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR624Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL222Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL313Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL316Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL398Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL226Cicer arietinum
carvrvL311Cicer arietinum
ccavrvL238Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL255Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL374Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR620Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR638Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR680Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR742Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR792Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR654Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR673Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR689Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL409Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL583Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL062Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL551Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR546Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR584Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigun07g107000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va02G043050.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr07.2609Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.08G232300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_08G01791.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigst.08G195700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
LR48_mrnaVigan02g121000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun07g107000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106769889gene-LOC106769889_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014655683.2-1exon-XM_014655683.2-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014655683.2-2exon-XM_014655683.2-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014655683.2-3exon-XM_014655683.2-3_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014511169.1cds-XP_014511169.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014655683.2_VrVC1973A-SNU_v1rna-XM_014655683.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014655683.2_VrVC1973A-SNU_v1rna-XM_014655683.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LJ98|PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.165e-69
Identity = 105/141 (74.47%), Postives = 121/141 (85.82%), Query Frame = 0 
Query:    6 GGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            G +EP NEQAV NMY   RSEL+QIYS IT+LEM+VSEH+LVINAIQPLDQSR+C+RMIGGVLVERTIKEVLPAVQRNKDGLEEVV +L E LEKKKK++TEFEAKYKIRI K + + K+   +KEG+AQGVLVG A  S+
Sbjct:    9 GLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRITKQE-DNKEGGNKKEGNAQGVLVGAASSSQ 148
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q55GN3|PFD2_DICDI (Probable prefoldin subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pfdn2 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.660e-33
Identity = 54/109 (49.54%), Postives = 81/109 (74.31%), Query Frame = 0 
Query:    8 KEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRI 116
            K+ + E  +   Y  ++S+  QI S+I+E E +V E+ LVINAIQ L+ +R+C+RM+GGVLVERT+ EVLP +++N+DG++EVV +L+E L  K KE+ +F A YKI+I
Sbjct:    5 KQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMVGGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|A1A4P5|PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.468e-31
Identity = 57/137 (41.61%), Postives = 91/137 (66.42%), Query Frame = 0 
Query:    7 GKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKAD----AEVKDESGRKEGSAQGVLV 139
            GK  ++ + V   +  +R E   + SK  ELEME++EH+LVI+ ++ +D++R+CYRM+GGVLVERT+KEVLPA++ NK+ +++++  L + L+ K KE+ EF  K+ IR+   D    A+   E    + S+ GVLV
Sbjct:   17 GKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKASSAGVLV 153
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9UHV9|PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.567e-31
Identity = 57/137 (41.61%), Postives = 91/137 (66.42%), Query Frame = 0 
Query:    7 GKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKAD----AEVKDESGRKEGSAQGVLV 139
            GK  ++ + V   +  +R E   + SK  ELEME++EH+LVI+ ++ +D++R+CYRM+GGVLVERT+KEVLPA++ NK+ +++++  L + L+ K KE+ EF  K+ IR+   D    A+   E    + S+ GVLV
Sbjct:   17 GKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKASSAGVLV 153
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|O70591|PFD2_MOUSE (Prefoldin subunit 2 OS=Mus musculus OX=10090 GN=Pfdn2 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.406e-30
Identity = 57/131 (43.51%), Postives = 90/131 (68.70%), Query Frame = 0 
Query:   13 EQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKAD----AEVKDESGRKEGSAQGVLV 139
            EQ +A  +  +R E   + SK  ELEME++EH+LVI+ ++ +D++R+CYRM+GGVLVERT+KEVLPA++ NK+ +++++  L++ L+ K KE+ EF  K+ IR+   D    A+   E    + S+ GVLV
Sbjct:   24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKASSAGVLV 153
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|B0BN18|PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.468e-30
Identity = 57/131 (43.51%), Postives = 90/131 (68.70%), Query Frame = 0 
Query:   13 EQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKAD----AEVKDESGRKEGSAQGVLV 139
            EQ +A  +  +R E   + SK  ELEME++EH+LVI+ ++ +D++R+CYRM+GGVLVERT+KEVLPA++ NK+ +++++  L++ L+ K KE+ EF  K+ IR+   D    A+   E    + S+ GVLV
Sbjct:   24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKSSSAGVLV 153
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9VTE5|PFD2_DROME (Probable prefoldin subunit 2 OS=Drosophila melanogaster OX=7227 GN=Pfdn2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.578e-22
Identity = 40/114 (35.09%), Postives = 69/114 (60.53%), Query Frame = 0 
Query:    4 AEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIR 117
             E  K  ++++A+   +  +R+E   + + +  LEM++ EH  VI  ++  D  R+C+R IGGVL ERT+KEVLP +  NKD + + +  +   L KK  E+ +F+ ++ I+IR
Sbjct:    3 TESAKPALSQEAIVAQFQQLRNEQRNLVNSLNTLEMDLREHKTVIETLEAADPERKCFRQIGGVLCERTVKEVLPQLVENKDFIAKTIQMVTNDLSKKGSELNKFKEEHNIKIR 116
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9UTC9|PFD2_SCHPO (Probable prefoldin subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC227.10 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.481e-20
Identity = 38/110 (34.55%), Postives = 68/110 (61.82%), Query Frame = 0 
Query:    7 GKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRI 116
             ++P  +Q +   Y S +S L QI  KI +LE +  EH LV++ +  +D +RRC+RMI GVLVERT+  V+P ++  ++G++  +  L +  ++ + E  +F+   KI++
Sbjct:    2 AEQPSRQQILQTQYNSYKSRLQQIAQKIVDLETDADEHKLVMDTLNSMDNNRRCFRMIHGVLVERTVGTVVPILKTTQEGIQTAMNGLLDQYKQLEAEFQKFQKDNKIQV 111
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|P40005|PFD2_YEAST (Prefoldin subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GIM4 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.782e-14
Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 0 
Query:   14 QAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRK 118
            QA  N Y  +  EL    +KI EL  +  EHT+VI  ++  + +R+CYRMIGG LVE  ++  LP ++  K+ +E  ++++ E L +  KE  +++   KI++ K
Sbjct:    9 QAKYNEYKQILEELQ---TKIIELGHDKDEHTIVIKTLKDAEPTRKCYRMIGGALVESDVQTSLPILETKKENIEGTISKMKETLIQTAKEFEKWKKDNKIQVVK 110
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|A8WVJ9|PFD2_CAEBR (Prefoldin subunit 2 OS=Caenorhabditis briggsae OX=6238 GN=pfd-2 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.179e-11
Identity = 33/101 (32.67%), Postives = 59/101 (58.42%), Query Frame = 0 
Query:   16 VANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRI 116
            V   +  +R +  +I +++T +E E  E   V++ I+ L   ++C+R+I   LVE T+K+V+P ++ N   L  V  +LNE L +K KE+ + +  + IRI
Sbjct:   22 VVEKFKQLRDQQQEIATEVTRIEEERREIGRVLDVIKDLKPDQKCFRLISDSLVEYTVKDVIPDLENNMTNLGLVSKQLNEQLVEKGKELNQHKTAHNIRI 122
[Close]
BLAST of rna-XM_014655683.2 vs. Araport11
Match: AT3G22480.2 (| prefoldin 2 | Chr3:7969080-7969526 FORWARD LENGTH=148 | 201606)

HSP 1 Score: 207.608 bits (527), Expect = 7.331e-70
Identity = 105/141 (74.47%), Postives = 121/141 (85.82%), Query Frame = 0 
Query:    6 GGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            G +EP NEQAV NMY   RSEL+QIYS IT+LEM+VSEH+LVINAIQPLDQSR+C+RMIGGVLVERTIKEVLPAVQRNKDGLEEVV +L E LEKKKK++TEFEAKYKIRI K + + K+   +KEG+AQGVLVG A  S+
Sbjct:    9 GLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRITKQE-DNKEGGNKKEGNAQGVLVGAASSSQ 148
[Close]
BLAST of rna-XM_014655683.2 vs. Araport11
Match: AT3G22480.1 (| prefoldin 2 | Chr3:7969080-7969526 FORWARD LENGTH=148 | 201606)

HSP 1 Score: 207.608 bits (527), Expect = 7.331e-70
Identity = 105/141 (74.47%), Postives = 121/141 (85.82%), Query Frame = 0 
Query:    6 GGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            G +EP NEQAV NMY   RSEL+QIYS IT+LEM+VSEH+LVINAIQPLDQSR+C+RMIGGVLVERTIKEVLPAVQRNKDGLEEVV +L E LEKKKK++TEFEAKYKIRI K + + K+   +KEG+AQGVLVG A  S+
Sbjct:    9 GLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRITKQE-DNKEGGNKKEGNAQGVLVGAASSSQ 148
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UZ34|A0A1S3UZ34_VIGRR (probable prefoldin subunit 2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106769889 PE=3 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 7.793e-100
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 
Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MYA0|A0A4D6MYA0_VIGUN (Prefoldin subunit 2 OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g1513 PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 1.506e-99
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0 
Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQ+RRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQTRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SRW5|A0A0S3SRW5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G232300 PE=3 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 4.512e-99
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0 
Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MA AEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MANAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TX01|A0A0L9TX01_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g121000 PE=3 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 4.512e-99
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0 
Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MA AEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MANAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
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BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|V7B541|V7B541_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G161600g PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.512e-97
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 
Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYASMRS+LNQIYSKITELEMEVSEHTLV+NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEITEFE KYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPINEQAVANMYASMRSDLNQIYSKITELEMEVSEHTLVMNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEITEFETKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|C6SVP2|C6SVP2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786369 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.019e-97
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 
Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYA+MRSELNQIYSKITELEMEVSEHTLV NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEI+EFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPINEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QY18|A0A0B2QY18_GLYSO (Putative prefoldin subunit 2 OS=Glycine soja OX=3848 GN=D0Y65_036492 PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.019e-97
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 
Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYA+MRSELNQIYSKITELEMEVSEHTLV NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEI+EFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPINEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|I1LYK6|I1LYK6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786369 PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.202e-97
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 
Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYA+MRSELNQIYSKITELEMEVSEHTLV NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEI+EFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    4 MAKAEGGKEPINEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 149
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445KGL4|A0A445KGL4_GLYSO (Putative prefoldin subunit 2 OS=Glycine soja OX=3848 GN=D0Y65_016354 PE=3 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 4.683e-97
Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 0 
Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEP+NEQAVANMYA+MRSELNQIYSKITELEMEVSEHTLV NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEI+EFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPVNEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
[Close]
BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|I1KFP3|I1KFP3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100818633 PE=3 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 4.683e-97
Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 0 
Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEP+NEQAVANMYA+MRSELNQIYSKITELEMEVSEHTLV NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEI+EFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPVNEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
The following BLAST results are available for this feature:
BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9LJ98|PFD2_ARATH7.165e-6974.47Probable prefoldin subunit 2 OS=Arabidopsis thalia... [more]
sp|Q55GN3|PFD2_DICDI1.660e-3349.54Probable prefoldin subunit 2 OS=Dictyostelium disc... [more]
sp|A1A4P5|PFD2_BOVIN1.468e-3141.61Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2... [more]
sp|Q9UHV9|PFD2_HUMAN1.567e-3141.61Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFD... [more]
sp|O70591|PFD2_MOUSE1.406e-3043.51Prefoldin subunit 2 OS=Mus musculus OX=10090 GN=Pf... [more]
sp|B0BN18|PFD2_RAT1.468e-3043.51Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 ... [more]
sp|Q9VTE5|PFD2_DROME5.578e-2235.09Probable prefoldin subunit 2 OS=Drosophila melanog... [more]
sp|Q9UTC9|PFD2_SCHPO4.481e-2034.55Probable prefoldin subunit 2 OS=Schizosaccharomyce... [more]
sp|P40005|PFD2_YEAST1.782e-1435.24Prefoldin subunit 2 OS=Saccharomyces cerevisiae (s... [more]
sp|A8WVJ9|PFD2_CAEBR1.179e-1132.67Prefoldin subunit 2 OS=Caenorhabditis briggsae OX=... [more]
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BLAST of rna-XM_014655683.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G22480.27.331e-7074.47| prefoldin 2 | Chr3:7969080-7969526 FORWARD LENGT... [more]
AT3G22480.17.331e-7074.47| prefoldin 2 | Chr3:7969080-7969526 FORWARD LENGT... [more]
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BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3UZ34|A0A1S3UZ34_VIGRR7.793e-100100.00probable prefoldin subunit 2 OS=Vigna radiata var.... [more]
tr|A0A4D6MYA0|A0A4D6MYA0_VIGUN1.506e-9999.32Prefoldin subunit 2 OS=Vigna unguiculata OX=3917 G... [more]
tr|A0A0S3SRW5|A0A0S3SRW5_PHAAN4.512e-9999.32Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9TX01|A0A0L9TX01_PHAAN4.512e-9999.32Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|V7B541|V7B541_PHAVU1.512e-9797.26Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|C6SVP2|C6SVP2_SOYBN3.019e-9797.26Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2QY18|A0A0B2QY18_GLYSO3.019e-9797.26Putative prefoldin subunit 2 OS=Glycine soja OX=38... [more]
tr|I1LYK6|I1LYK6_SOYBN3.202e-9797.26Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445KGL4|A0A445KGL4_GLYSO4.683e-9796.58Putative prefoldin subunit 2 OS=Glycine soja OX=38... [more]
tr|I1KFP3|I1KFP3_SOYBN4.683e-9796.58Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 14..118
e-value: 5.7E-25
score: 87.3
IPR009053PrefoldinGENE3D1.10.287.370coord: 11..121
e-value: 1.6E-22
score: 81.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..146
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 14..115
IPR027235Prefoldin subunit 2PANTHERPTHR13303PREFOLDIN SUBUNIT 2coord: 1..140

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014655683.2_VrVC1973A-SNU_v1 ID=rna-XM_014655683.2_VrVC1973A-SNU_v1; Name=rna-XM_014655683.2; organism=Vigna radiata; type=mRNA; length=441bp
ATGGCTAAAGCGGAAGGTGGCAAGGAACCAATAAATGAACAAGCAGTTGC
AAATATGTATGCTTCTATGAGGTCTGAGCTCAACCAAATTTACTCCAAAA
TAACTGAACTGGAGATGGAAGTCAGTGAGCACACATTAGTCATCAATGCC
ATTCAGCCTCTTGACCAATCTAGACGATGCTACCGAATGATTGGAGGGGT
GCTTGTGGAGAGAACCATCAAAGAGGTCTTGCCTGCTGTCCAGCGAAATA
AAGATGGTCTTGAAGAGGTTGTTGCAAGGCTTAATGAGGCACTGGAAAAG
AAGAAAAAGGAAATTACTGAGTTTGAGGCTAAATATAAAATCAGGATAAG
GAAGGCTGATGCTGAGGTGAAGGATGAATCCGGTAGGAAGGAAGGGTCTG
CCCAAGGAGTTCTTGTGGGTCCTGCTGGTGGAAGTGAATGA
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protein sequence of rna-XM_014655683.2_VrVC1973A-SNU_v1

>rna-XM_014655683.2_VrVC1973A-SNU_v1 ID=rna-XM_014655683.2_VrVC1973A-SNU_v1; Name=rna-XM_014655683.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=146bp
MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINA
IQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEK
KKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
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mRNA from alignment at chr08:25730491..25735422+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014655683.2_VrVC1973A-SNU_v1 ID=rna-XM_014655683.2_VrVC1973A-SNU_v1; Name=rna-XM_014655683.2; organism=Vigna radiata; type=mRNA; length=4932bp; location=Sequence derived from: chr08:25730491..25735422+ (Vigna radiata
TCTGAGTGCAGAACGCTTGGCTGAACAAAAGGATGAATGAACACAAGGCT
GACCTAAAGTTGAATCAGAGGTGCTGGGTCTGAATCTGGAGAGCTGAGTT
CAAATCGGGGCTGCTGCTAAGAAAATTCAGTGTCACTCAAAGTTGCTGAG
GCTGAGGCGTCGATAAGACCTAGGTTCGGGTTTTTCTTCTTCGATTCTTA
GGGTTCTCTGTTTgaataaaaatgagtttttagaaaagataaaagactAC
TCTCTTCGACACATCTTGTTTTCTCATTCTGTAATTCTTCTTTGTAGAGT
AGTGTAATATAGGGCATCGtcacttcttcttcctctttctttcttatttt
ccaaGAGGTCATCTTAGGTCAGGATTCCATTTAACACACCAATTAGAACA
GGAAGTTTTAACTCTGgatcaaattcatttttctgtttagtttagtttat
tgTCCCATGCCTTGTTTTTGTGGTTTAAATCGTGTAGTTGGGTTAACCTT
GATAGTATTGATATTAGGCCTGCTTGCATCcattttaatttctagttttt
gtGTATGTCTTGATACCCAATTCGTAGATATTAATTCCTGTGCATTTTCT
GGTCTAGGTAGTTGTGTTTGATTCATTTTATGATGCACATAATTGGATAT
CATCGTCTGTTTAAGGCTGAACTTACATATCATTCATATCTTGCATTTAC
AAAATAGGTAACACTGCACTTGCATTTGCATTAGAATCATAATTGTAGTT
TCTGATTCAGCTTGACTTAGTTTGAATTTTCCTAGTTTTCATGCAGTTTT
TACATCTGTTGCATCAATTAGAAGTATTAGACTCATTTCACTTTGCATAT
AACACAAGTGTATCATTGCTGAATCATTTAAATCTGCATCCACATTTCTG
ATATCTGATATTGAAACTGTCCAAATAGATTCATAGTAGGTTTTTAACCA
TGCATCGTAGTTGTTTGAGATTTGTTCCCGCTTTGATACCAATTGAGAAT
TAAACtctaaaataattctagaggacttgattgatccctctcataatctt
ctatttataagaataaattgatacaagagtacatgataattaggataatc
ctagacacaatataatgatgatgataactAGAATaatcctagacacaata
taattatgataaataggataaccctagacacaatataatgatgataaata
tgATAACtctaaacacaatataatgatgataaataaggTAGTTTCTGCAT
ATCATTTTGAAATCTGCATTAAAACTGCATTTAGCCTTTGAACCACAATG
CTGTCTTTCTTTTGCTGTTAATAATAGGTTCAACTGGGTGAATTTCATTC
CTACCATTTTATTACTTGTTCACCTTGCATTTCCCATTCATATTCAGCAT
TTTAAGTTTGCGTAAACCATTCCATATGCATCAGCATCTTAGGAATCCAT
ATTCTGCAAGTGAACCAGAAAATATGCTTTAAAGGGAAATAAAGTTTGAA
CATTAACTTGTTGCCATTCAATATTTGCTTAATATCAATGGTATTATGAT
GCAGTTATGAATACATTCTAGCCCTTATTGCTTGATCATGAGTCGTGACT
CATTACACTGTAATTATTATGACTGCATTAAGAAGAAAGTATGaaggtaa
aataatttaagttttttccATAAGCTAAAATACACTTTGTCCCTGAACTT
TTATATCTAACTACTACAAAAAATTGAAGtgcataagttaattttagttt
ataggGGAAACTTGAATCATCTAACTTTCTTATTTGTGAAATAATTTGAC
AGTTTCTGTGAGTTTGTCTGTCGACACAATGGTTCACAATAGAACTAATA
TGACATTATTTGTTTCATGGTGCTGACTGACTCTAACTAATGGGATAAGG
TTTTGAGCTTGATTCAAGTTGATGTGATTAAGTTTTAACttgttgataat
ttttttttttcagcttcCAGTCTCACAATCAGAGAACAACAATCCTTTTA
GACCAGCTTGAAGCAGTTCTAGGCCTCACATTCCTACAAACTTGCATTCT
GCATCTGCTCTGACAACTAGGTAACTGTCTCTCGGCCTTCTATTCCCACA
CATAGAAACTCATGTTACTGTTTTTAAAACTATCTTTTACAATCTAAatc
tatataaattattattccattaattaagaaaacaataacTAGAATGTATT
AAGAAAACTATAGGCAAGAGATCTATCAATCATTAGTACTATAGGCAATC
ATTAGTACTATCTTCCCTGTTCCTCCTATTATGAACTTCCGAAATTGCAA
GAGATCTAGCAGAAAATAGCATAAACTGTGCACTGTTGTAATTTATGCAG
CTATGATTATATCATTTCAAAAACTATCCAAAACTTTAAGTTATAAGAAG
ACTTCAAAAATTCACTACCTAAAACTAAGATAGCCTACTAAACTAGCCAA
AAATGTAAAACTGCACTATATCAGCTtaggaaaaattaaagaaaacatct
AGACACGTTTCAATTGGTAAAAAGATAAGGAATAGCTCAAACACCAAAAT
CTggataaaacttaaaatttgacTATCTAAGACTTACACTAGACTACAAT
AGGCTAAAACTGCAAAATCTGAGAATTGAACTAAACTAGTATTTAGAAAT
GCTAAACAACTACCTAGGCACATTCTAAATGacataaagaaagtaaaaac
taaggtaaaattaaaacaaactacCTAGACACATTCTAAATGATATACGA
CACCTAAAACAGTAGCTAACCTATTTACACAACTGCACTAAACTGTCCTA
GAAGGAAGTAAGACAACtgtcctaacaagtttaaaatggtAAAATCTAGC
TAAGAAACAACTCAACTTACCAAATATACCTAGAACTCAAAATATGACTA
CTTAAGACCTAAAATTAGTAACTAAAACGGGCTAAAAGTGCTAAAACTAA
TAACTGTACTCGACTACTAGTTGAAACTGTAAAGTAACTATCTAGGCAAC
TTTTGAATGATAAAAGGAAGATAAAAATCATGTCAcaattcaaaaataac
aaaaaaaaaatcaaagtttcacTGGTTGAGACTtacaaaattatgttaaa
agtaAGTTAAAGCTAAGGGCTGCACTAAAACACTAAAAGAAACCATATTT
AAACTGCCTATTCAAGTTTTAAAGGGCTAAGAATAACCAAAAATTGACTG
CAGAACTAATTCGccataaaacttaaaaaactcACTacctaaatttgaaa
attcattAAGACCAAGTAGTAAACACTCACACAAGAGCAAAGCTCACAAA
AGCATGCTAAGGTGTCTCAAATTCATTATTAATCAACCTTTTACATCTAT
TCTAGAGGCTCCCTGAAATAGGCATGGATCCTCTTagcaaatataaaatg
ttatgtCCTAGAAACTAGAGCAACCTAGGCAACCCATGCTCTCTTCCTTG
CTCTCCAAGAGTGACCAAGCCATCTAGAAGGTCAACAAAAGTCTCCCTTG
CTCTGCAAGGCCTCTCCCACGTTTATTACCATCTAGAAGGTCAACCAAGC
TCCTCTCCTCTACAAATGCAGCCCCCACATGTTGGGCCAACCTTCACGCC
CTTTCTTGCTCCATCTAGGTGCGCCCCTTAGGAAACTAAGGGTGTCCAAG
AGCAATCCTACAAAAAGAAAGGAGTAATTCACGCGTCTATAATTTATTCT
aagacaagaagaagaaaaactaaaccaaataaaagaaagaaggtGAAGAA
ACTTCTCTCCTAAACAAGCTTATTTTCCCCAAGCATGTACCTTCATCCTT
GGTAGGGGTTAGGAGCTCATCATGACCTAACCCACTAGTTTCTAACTTTC
ACTGCCCTATCTATGAAATgaacaagagaaagaaaatgggaaagtaGAGA
GATCTCAGAGGCTGTCCAGGACAATCAACTGAGAGCGGAAATGAGAACCA
CCGAATCACAAAATTGTTACCTCGGTGTGTTTTGCATAAATCAAGACCAA
GAAACAAACATTCAATGTCGTTTTTACAAGAGAGATTCATCCTATATGGA
TTTTTACAACAAAGTATAGGCAAAACATGTGATGTTTAACACTTTTGGAT
CTGCTTTATTGAATTATGAATGTTGATGTTATTGCATCTTAATGTATTGT
CTCTATAGATTGGATAGTATTGAAAGAAAGGAATTGTatttaattgaaag
aaagataaagctaacaacatttcaaatattttcctGGTATACTTGTGTTT
ATTCCAATTACACTTTGTTTCTTTACCTCAAAGGCAGTTTATTTTCATTA
GTGTAGAATCATGGCTAAAGCGGAAGGTGGCAAGGAACCAATAAATGAAC
AAGCAGTTGCAAATATGTATGCTTCTATGAGGTCTGAGCTCAACCAAATT
TACTCCAAAATAACTGAACTGGAGATGGAAGTCAGTGAGCACACATTAGT
CATCAATGCCATTCAGCCTCTTGACCAATCTAGACGATGCTACCGAATGA
TTGGAGGGGTGCTTGTGGAGAGAACCATCAAAGAGGTCTTGCCTGCTGTC
CAGCGAAATAAAGATGGTCTTGAAGAGGTTGTTGCAAGGCTTAATGAGGC
actggaaaagaagaaaaaggaaattacTGAGTTTGAGGCTAAATATAAAA
TCAGGATAAGGAAGGCTGATGCTGAGGTGAAGGATGAATCCGGTAGGAAG
GAAGGGTCTGCCCAAGGAGTTCTTGTGGGTCCTGCTGGTGGAAGTGAATG
ATTTGTCAAATTTTATTGCTTTGTTTCCTCAAACTATTAGCCAAAACTTC
CTGCCTTTACAATTGGGTGGAGGCAGTGCTATGCTTTGCTTTACAGAGTA
TTGACTAAACTATTTACAACTTGATATGACAACCTTCAGTTTAATTGCTT
TGGCTGAAAAGAACCGTTCTTTATTGCGTTTA
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Coding sequence (CDS) from alignment at chr08:25730491..25735422+

>rna-XM_014655683.2_VrVC1973A-SNU_v1 ID=rna-XM_014655683.2_VrVC1973A-SNU_v1; Name=rna-XM_014655683.2; organism=Vigna radiata; type=CDS; length=441bp; location=Sequence derived from: chr08:25730491..25735422+ (Vigna radiata
ATGGCTAAAGCGGAAGGTGGCAAGGAACCAATAAATGAACAAGCAGTTGC
AAATATGTATGCTTCTATGAGGTCTGAGCTCAACCAAATTTACTCCAAAA
TAACTGAACTGGAGATGGAAGTCAGTGAGCACACATTAGTCATCAATGCC
ATTCAGCCTCTTGACCAATCTAGACGATGCTACCGAATGATTGGAGGGGT
GCTTGTGGAGAGAACCATCAAAGAGGTCTTGCCTGCTGTCCAGCGAAATA
AAGATGGTCTTGAAGAGGTTGTTGCAAGGCTTAATGAGGCactggaaaag
aagaaaaaggaaattacTGAGTTTGAGGCTAAATATAAAATCAGGATAAG
GAAGGCTGATGCTGAGGTGAAGGATGAATCCGGTAGGAAGGAAGGGTCTG
CCCAAGGAGTTCTTGTGGGTCCTGCTGGTGGAAGTGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002777PFD_beta-like
IPR009053Prefoldin
IPR027235PFD2
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex