rna-XM_014655683.2

Transcript Overview


Name	rna-XM_014655683.2
Unique Name	rna-XM_014655683.2_VrVC1973A-SNU_v1
Type	mRNA
Organism	Vigna radiata (Mung bean, green gram)
Sequence length	441
Product	probable prefoldin subunit 2, transcript variant X2

References

External references for this mRNA


Database	Accession
GeneID	106769889
Genbank	XM_014655683.2

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr08	chromosome	chr08:25730491..25735422 +	Vigna radiata cv. VC1973A genome v6.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna radiata cv. VC1973A genome v6.0	2023-06-13
InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL	2023-06-20

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
asvrvL369	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anvrvL0657	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL0806	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL1114	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL1173	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
caivrvL307	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caivrvL390	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
cavrvL240	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
cavrvL339	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ccvrvL0256	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccvrvL0700	Cajanus cajan Asha genome v1.0	Cajanus cajan
crvrvL282	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crvrvL376	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
pvvrvL067	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvvrvL591	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
tifvrvL385	Vicia faba cv. Tiffany genome v1.0	Vicia faba
tifvrvL608	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vrvvrvL142	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vfhvrvL400	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vfhvrvL615	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvssR754	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvssR772	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvssR811	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvzwsR625	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vrvzwsR654	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vrvvuaR544	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvzwsR675	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vrvvuR587	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vrvvuaR575	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvvuaR600	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvvuR624	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
canvrvL222	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canvrvL313	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjvrvL316	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjvrvL398	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carvrvL226		Cicer arietinum
carvrvL311		Cicer arietinum
ccavrvL238	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavrvL255	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavrvL374	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vrvvumR620	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvumR638	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvumR680	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvvaR742	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvvaR792	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvstR654	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vrvvstR673	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vrvvstR689	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvrvL409	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvrvL583	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
pvfvrvL062	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvrvL551	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
vrvvunR546	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
vrvvunR584	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Orthologs


Gene/Transcript	Assembly	Species
Vigun07g107000.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Va02G043050.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
evm.model.Chr07.2609	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Vigan.08G232300.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Vum_08G01791.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Vigst.08G195700.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
LR48_mrnaVigan02g121000	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Vigun07g107000.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LOC106769889	gene-LOC106769889_VrVC1973A-SNU_v1	Vigna radiata	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
exon-XM_014655683.2-1	exon-XM_014655683.2-1_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_014655683.2-2	exon-XM_014655683.2-2_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_014655683.2-3	exon-XM_014655683.2-3_VrVC1973A-SNU_v1	Vigna radiata	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds-XP_014511169.1	cds-XP_014511169.1_VrVC1973A-SNU_v1	Vigna radiata	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-XM_014655683.2_VrVC1973A-SNU_v1	rna-XM_014655683.2_VrVC1973A-SNU_v1	Vigna radiata	polypeptide
rna-XM_014655683.2_VrVC1973A-SNU_v1	rna-XM_014655683.2_VrVC1973A-SNU_v1-protein	Vigna radiata	polypeptide

Homology

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LJ98|PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.165e-69
Identity = 105/141 (74.47%), Postives = 121/141 (85.82%), Query Frame = 0

Query:    6 GGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            G +EP NEQAV NMY   RSEL+QIYS IT+LEM+VSEH+LVINAIQPLDQSR+C+RMIGGVLVERTIKEVLPAVQRNKDGLEEVV +L E LEKKKK++TEFEAKYKIRI K + + K+   +KEG+AQGVLVG A  S+
Sbjct:    9 GLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRITKQE-DNKEGGNKKEGNAQGVLVGAASSSQ 148

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q55GN3|PFD2_DICDI (Probable prefoldin subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pfdn2 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.660e-33
Identity = 54/109 (49.54%), Postives = 81/109 (74.31%), Query Frame = 0

Query:    8 KEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRI 116
            K+ + E  +   Y  ++S+  QI S+I+E E +V E+ LVINAIQ L+ +R+C+RM+GGVLVERT+ EVLP +++N+DG++EVV +L+E L  K KE+ +F A YKI+I
Sbjct:    5 KQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMVGGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|A1A4P5|PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.468e-31
Identity = 57/137 (41.61%), Postives = 91/137 (66.42%), Query Frame = 0

Query:    7 GKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKAD----AEVKDESGRKEGSAQGVLV 139
            GK  ++ + V   +  +R E   + SK  ELEME++EH+LVI+ ++ +D++R+CYRM+GGVLVERT+KEVLPA++ NK+ +++++  L + L+ K KE+ EF  K+ IR+   D    A+   E    + S+ GVLV
Sbjct:   17 GKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKASSAGVLV 153

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9UHV9|PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.567e-31
Identity = 57/137 (41.61%), Postives = 91/137 (66.42%), Query Frame = 0

Query:    7 GKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKAD----AEVKDESGRKEGSAQGVLV 139
            GK  ++ + V   +  +R E   + SK  ELEME++EH+LVI+ ++ +D++R+CYRM+GGVLVERT+KEVLPA++ NK+ +++++  L + L+ K KE+ EF  K+ IR+   D    A+   E    + S+ GVLV
Sbjct:   17 GKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKASSAGVLV 153

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|O70591|PFD2_MOUSE (Prefoldin subunit 2 OS=Mus musculus OX=10090 GN=Pfdn2 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.406e-30
Identity = 57/131 (43.51%), Postives = 90/131 (68.70%), Query Frame = 0

Query:   13 EQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKAD----AEVKDESGRKEGSAQGVLV 139
            EQ +A  +  +R E   + SK  ELEME++EH+LVI+ ++ +D++R+CYRM+GGVLVERT+KEVLPA++ NK+ +++++  L++ L+ K KE+ EF  K+ IR+   D    A+   E    + S+ GVLV
Sbjct:   24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKASSAGVLV 153

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|B0BN18|PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.468e-30
Identity = 57/131 (43.51%), Postives = 90/131 (68.70%), Query Frame = 0

Query:   13 EQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKAD----AEVKDESGRKEGSAQGVLV 139
            EQ +A  +  +R E   + SK  ELEME++EH+LVI+ ++ +D++R+CYRM+GGVLVERT+KEVLPA++ NK+ +++++  L++ L+ K KE+ EF  K+ IR+   D    A+   E    + S+ GVLV
Sbjct:   24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKSSSAGVLV 153

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9VTE5|PFD2_DROME (Probable prefoldin subunit 2 OS=Drosophila melanogaster OX=7227 GN=Pfdn2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.578e-22
Identity = 40/114 (35.09%), Postives = 69/114 (60.53%), Query Frame = 0

Query:    4 AEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIR 117
             E  K  ++++A+   +  +R+E   + + +  LEM++ EH  VI  ++  D  R+C+R IGGVL ERT+KEVLP +  NKD + + +  +   L KK  E+ +F+ ++ I+IR
Sbjct:    3 TESAKPALSQEAIVAQFQQLRNEQRNLVNSLNTLEMDLREHKTVIETLEAADPERKCFRQIGGVLCERTVKEVLPQLVENKDFIAKTIQMVTNDLSKKGSELNKFKEEHNIKIR 116

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9UTC9|PFD2_SCHPO (Probable prefoldin subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC227.10 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.481e-20
Identity = 38/110 (34.55%), Postives = 68/110 (61.82%), Query Frame = 0

Query:    7 GKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRI 116
             ++P  +Q +   Y S +S L QI  KI +LE +  EH LV++ +  +D +RRC+RMI GVLVERT+  V+P ++  ++G++  +  L +  ++ + E  +F+   KI++
Sbjct:    2 AEQPSRQQILQTQYNSYKSRLQQIAQKIVDLETDADEHKLVMDTLNSMDNNRRCFRMIHGVLVERTVGTVVPILKTTQEGIQTAMNGLLDQYKQLEAEFQKFQKDNKIQV 111

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|P40005|PFD2_YEAST (Prefoldin subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GIM4 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.782e-14
Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 0

Query:   14 QAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRK 118
            QA  N Y  +  EL    +KI EL  +  EHT+VI  ++  + +R+CYRMIGG LVE  ++  LP ++  K+ +E  ++++ E L +  KE  +++   KI++ K
Sbjct:    9 QAKYNEYKQILEELQ---TKIIELGHDKDEHTIVIKTLKDAEPTRKCYRMIGGALVESDVQTSLPILETKKENIEGTISKMKETLIQTAKEFEKWKKDNKIQVVK 110

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Match: sp|A8WVJ9|PFD2_CAEBR (Prefoldin subunit 2 OS=Caenorhabditis briggsae OX=6238 GN=pfd-2 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.179e-11
Identity = 33/101 (32.67%), Postives = 59/101 (58.42%), Query Frame = 0

Query:   16 VANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRI 116
            V   +  +R +  +I +++T +E E  E   V++ I+ L   ++C+R+I   LVE T+K+V+P ++ N   L  V  +LNE L +K KE+ + +  + IRI
Sbjct:   22 VVEKFKQLRDQQQEIATEVTRIEEERREIGRVLDVIKDLKPDQKCFRLISDSLVEYTVKDVIPDLENNMTNLGLVSKQLNEQLVEKGKELNQHKTAHNIRI 122

[Close]

BLAST of rna-XM_014655683.2 vs. Araport11
Match: AT3G22480.2 (| prefoldin 2 | Chr3:7969080-7969526 FORWARD LENGTH=148 | 201606)

HSP 1 Score: 207.608 bits (527), Expect = 7.331e-70
Identity = 105/141 (74.47%), Postives = 121/141 (85.82%), Query Frame = 0

Query:    6 GGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            G +EP NEQAV NMY   RSEL+QIYS IT+LEM+VSEH+LVINAIQPLDQSR+C+RMIGGVLVERTIKEVLPAVQRNKDGLEEVV +L E LEKKKK++TEFEAKYKIRI K + + K+   +KEG+AQGVLVG A  S+
Sbjct:    9 GLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRITKQE-DNKEGGNKKEGNAQGVLVGAASSSQ 148

[Close]

BLAST of rna-XM_014655683.2 vs. Araport11
Match: AT3G22480.1 (| prefoldin 2 | Chr3:7969080-7969526 FORWARD LENGTH=148 | 201606)

HSP 1 Score: 207.608 bits (527), Expect = 7.331e-70
Identity = 105/141 (74.47%), Postives = 121/141 (85.82%), Query Frame = 0

Query:    6 GGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            G +EP NEQAV NMY   RSEL+QIYS IT+LEM+VSEH+LVINAIQPLDQSR+C+RMIGGVLVERTIKEVLPAVQRNKDGLEEVV +L E LEKKKK++TEFEAKYKIRI K + + K+   +KEG+AQGVLVG A  S+
Sbjct:    9 GLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRITKQE-DNKEGGNKKEGNAQGVLVGAASSSQ 148

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UZ34|A0A1S3UZ34_VIGRR (probable prefoldin subunit 2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106769889 PE=3 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 7.793e-100
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0

Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MYA0|A0A4D6MYA0_VIGUN (Prefoldin subunit 2 OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g1513 PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 1.506e-99
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0

Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQ+RRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQTRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SRW5|A0A0S3SRW5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G232300 PE=3 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 4.512e-99
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0

Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MA AEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MANAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TX01|A0A0L9TX01_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g121000 PE=3 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 4.512e-99
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0

Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MA AEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MANAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|V7B541|V7B541_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G161600g PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.512e-97
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0

Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYASMRS+LNQIYSKITELEMEVSEHTLV+NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEITEFE KYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPINEQAVANMYASMRSDLNQIYSKITELEMEVSEHTLVMNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEITEFETKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|C6SVP2|C6SVP2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786369 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.019e-97
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0

Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYA+MRSELNQIYSKITELEMEVSEHTLV NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEI+EFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPINEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QY18|A0A0B2QY18_GLYSO (Putative prefoldin subunit 2 OS=Glycine soja OX=3848 GN=D0Y65_036492 PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.019e-97
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0

Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYA+MRSELNQIYSKITELEMEVSEHTLV NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEI+EFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPINEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|I1LYK6|I1LYK6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786369 PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.202e-97
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0

Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEPINEQAVANMYA+MRSELNQIYSKITELEMEVSEHTLV NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEI+EFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    4 MAKAEGGKEPINEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 149

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445KGL4|A0A445KGL4_GLYSO (Putative prefoldin subunit 2 OS=Glycine soja OX=3848 GN=D0Y65_016354 PE=3 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 4.683e-97
Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 0

Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEP+NEQAVANMYA+MRSELNQIYSKITELEMEVSEHTLV NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEI+EFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPVNEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146

[Close]

BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Match: tr|I1KFP3|I1KFP3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100818633 PE=3 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 4.683e-97
Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 0

Query:    1 MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEKKKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146
            MAKAEGGKEP+NEQAVANMYA+MRSELNQIYSKITELEMEVSEHTLV NAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNK+GLEEVVARLNEALEKKKKEI+EFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE
Sbjct:    1 MAKAEGGKEPVNEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 146

The following BLAST results are available for this feature:

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
BLAST of rna-XM_014655683.2 vs. Araport11
BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL

BLAST of rna-XM_014655683.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
sp\|Q9LJ98\|PFD2_ARATH	7.165e-69	74.47	Probable prefoldin subunit 2 OS=Arabidopsis thalia...	[more]
sp\|Q55GN3\|PFD2_DICDI	1.660e-33	49.54	Probable prefoldin subunit 2 OS=Dictyostelium disc...	[more]
sp\|A1A4P5\|PFD2_BOVIN	1.468e-31	41.61	Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2...	[more]
sp\|Q9UHV9\|PFD2_HUMAN	1.567e-31	41.61	Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFD...	[more]
sp\|O70591\|PFD2_MOUSE	1.406e-30	43.51	Prefoldin subunit 2 OS=Mus musculus OX=10090 GN=Pf...	[more]
sp\|B0BN18\|PFD2_RAT	1.468e-30	43.51	Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 ...	[more]
sp\|Q9VTE5\|PFD2_DROME	5.578e-22	35.09	Probable prefoldin subunit 2 OS=Drosophila melanog...	[more]
sp\|Q9UTC9\|PFD2_SCHPO	4.481e-20	34.55	Probable prefoldin subunit 2 OS=Schizosaccharomyce...	[more]
sp\|P40005\|PFD2_YEAST	1.782e-14	35.24	Prefoldin subunit 2 OS=Saccharomyces cerevisiae (s...	[more]
sp\|A8WVJ9\|PFD2_CAEBR	1.179e-11	32.67	Prefoldin subunit 2 OS=Caenorhabditis briggsae OX=...	[more]

BLAST of rna-XM_014655683.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 2

Position :

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Match Name	E-value	Identity	Description
AT3G22480.2	7.331e-70	74.47	\| prefoldin 2 \| Chr3:7969080-7969526 FORWARD LENGT...	[more]
AT3G22480.1	7.331e-70	74.47	\| prefoldin 2 \| Chr3:7969080-7969526 FORWARD LENGT...	[more]

BLAST of rna-XM_014655683.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|A0A1S3UZ34\|A0A1S3UZ34_VIGRR	7.793e-100	100.00	probable prefoldin subunit 2 OS=Vigna radiata var....	[more]
tr\|A0A4D6MYA0\|A0A4D6MYA0_VIGUN	1.506e-99	99.32	Prefoldin subunit 2 OS=Vigna unguiculata OX=3917 G...	[more]
tr\|A0A0S3SRW5\|A0A0S3SRW5_PHAAN	4.512e-99	99.32	Uncharacterized protein OS=Vigna angularis var. an...	[more]
tr\|A0A0L9TX01\|A0A0L9TX01_PHAAN	4.512e-99	99.32	Uncharacterized protein OS=Phaseolus angularis OX=...	[more]
tr\|V7B541\|V7B541_PHAVU	1.512e-97	97.26	Uncharacterized protein OS=Phaseolus vulgaris OX=3...	[more]
tr\|C6SVP2\|C6SVP2_SOYBN	3.019e-97	97.26	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]
tr\|A0A0B2QY18\|A0A0B2QY18_GLYSO	3.019e-97	97.26	Putative prefoldin subunit 2 OS=Glycine soja OX=38...	[more]
tr\|I1LYK6\|I1LYK6_SOYBN	3.202e-97	97.26	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]
tr\|A0A445KGL4\|A0A445KGL4_GLYSO	4.683e-97	96.58	Putative prefoldin subunit 2 OS=Glycine soja OX=38...	[more]
tr\|I1KFP3\|I1KFP3_SOYBN	4.683e-97	96.58	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 14..118 e-value: 5.7E-25 score: 87.3
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 11..121 e-value: 1.6E-22 score: 81.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..146
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 14..115
IPR027235	Prefoldin subunit 2	PANTHER	PTHR13303	PREFOLDIN SUBUNIT 2	coord: 1..140

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr08:25730491..25735422+
coding sequence from alignment at chr08:25730491..25735422+

mRNA sequence

>rna-XM_014655683.2_VrVC1973A-SNU_v1 ID=rna-XM_014655683.2_VrVC1973A-SNU_v1; Name=rna-XM_014655683.2; organism=Vigna radiata; type=mRNA; length=441bp
ATGGCTAAAGCGGAAGGTGGCAAGGAACCAATAAATGAACAAGCAGTTGC
AAATATGTATGCTTCTATGAGGTCTGAGCTCAACCAAATTTACTCCAAAA
TAACTGAACTGGAGATGGAAGTCAGTGAGCACACATTAGTCATCAATGCC
ATTCAGCCTCTTGACCAATCTAGACGATGCTACCGAATGATTGGAGGGGT
GCTTGTGGAGAGAACCATCAAAGAGGTCTTGCCTGCTGTCCAGCGAAATA
AAGATGGTCTTGAAGAGGTTGTTGCAAGGCTTAATGAGGCACTGGAAAAG
AAGAAAAAGGAAATTACTGAGTTTGAGGCTAAATATAAAATCAGGATAAG
GAAGGCTGATGCTGAGGTGAAGGATGAATCCGGTAGGAAGGAAGGGTCTG
CCCAAGGAGTTCTTGTGGGTCCTGCTGGTGGAAGTGAATGA

protein sequence of rna-XM_014655683.2_VrVC1973A-SNU_v1

>rna-XM_014655683.2_VrVC1973A-SNU_v1 ID=rna-XM_014655683.2_VrVC1973A-SNU_v1; Name=rna-XM_014655683.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=146bp
MAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHTLVINA
IQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKDGLEEVVARLNEALEK
KKKEITEFEAKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE

mRNA from alignment at chr08:25730491..25735422+

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-XM_014655683.2_VrVC1973A-SNU_v1 ID=rna-XM_014655683.2_VrVC1973A-SNU_v1; Name=rna-XM_014655683.2; organism=Vigna radiata; type=mRNA; length=4932bp; location=Sequence derived from: chr08:25730491..25735422+ (Vigna radiata
TCTGAGTGCAGAACGCTTGGCTGAACAAAAGGATGAATGAACACAAGGCT
GACCTAAAGTTGAATCAGAGGTGCTGGGTCTGAATCTGGAGAGCTGAGTT
CAAATCGGGGCTGCTGCTAAGAAAATTCAGTGTCACTCAAAGTTGCTGAG
GCTGAGGCGTCGATAAGACCTAGGTTCGGGTTTTTCTTCTTCGATTCTTA
GGGTTCTCTGTTTgaataaaaatgagtttttagaaaagataaaagactAC
TCTCTTCGACACATCTTGTTTTCTCATTCTGTAATTCTTCTTTGTAGAGT
AGTGTAATATAGGGCATCGtcacttcttcttcctctttctttcttatttt
ccaaGAGGTCATCTTAGGTCAGGATTCCATTTAACACACCAATTAGAACA
GGAAGTTTTAACTCTGgatcaaattcatttttctgtttagtttagtttat
tgTCCCATGCCTTGTTTTTGTGGTTTAAATCGTGTAGTTGGGTTAACCTT
GATAGTATTGATATTAGGCCTGCTTGCATCcattttaatttctagttttt
gtGTATGTCTTGATACCCAATTCGTAGATATTAATTCCTGTGCATTTTCT
GGTCTAGGTAGTTGTGTTTGATTCATTTTATGATGCACATAATTGGATAT
CATCGTCTGTTTAAGGCTGAACTTACATATCATTCATATCTTGCATTTAC
AAAATAGGTAACACTGCACTTGCATTTGCATTAGAATCATAATTGTAGTT
TCTGATTCAGCTTGACTTAGTTTGAATTTTCCTAGTTTTCATGCAGTTTT
TACATCTGTTGCATCAATTAGAAGTATTAGACTCATTTCACTTTGCATAT
AACACAAGTGTATCATTGCTGAATCATTTAAATCTGCATCCACATTTCTG
ATATCTGATATTGAAACTGTCCAAATAGATTCATAGTAGGTTTTTAACCA
TGCATCGTAGTTGTTTGAGATTTGTTCCCGCTTTGATACCAATTGAGAAT
TAAACtctaaaataattctagaggacttgattgatccctctcataatctt
ctatttataagaataaattgatacaagagtacatgataattaggataatc
ctagacacaatataatgatgatgataactAGAATaatcctagacacaata
taattatgataaataggataaccctagacacaatataatgatgataaata
tgATAACtctaaacacaatataatgatgataaataaggTAGTTTCTGCAT
ATCATTTTGAAATCTGCATTAAAACTGCATTTAGCCTTTGAACCACAATG
CTGTCTTTCTTTTGCTGTTAATAATAGGTTCAACTGGGTGAATTTCATTC
CTACCATTTTATTACTTGTTCACCTTGCATTTCCCATTCATATTCAGCAT
TTTAAGTTTGCGTAAACCATTCCATATGCATCAGCATCTTAGGAATCCAT
ATTCTGCAAGTGAACCAGAAAATATGCTTTAAAGGGAAATAAAGTTTGAA
CATTAACTTGTTGCCATTCAATATTTGCTTAATATCAATGGTATTATGAT
GCAGTTATGAATACATTCTAGCCCTTATTGCTTGATCATGAGTCGTGACT
CATTACACTGTAATTATTATGACTGCATTAAGAAGAAAGTATGaaggtaa
aataatttaagttttttccATAAGCTAAAATACACTTTGTCCCTGAACTT
TTATATCTAACTACTACAAAAAATTGAAGtgcataagttaattttagttt
ataggGGAAACTTGAATCATCTAACTTTCTTATTTGTGAAATAATTTGAC
AGTTTCTGTGAGTTTGTCTGTCGACACAATGGTTCACAATAGAACTAATA
TGACATTATTTGTTTCATGGTGCTGACTGACTCTAACTAATGGGATAAGG
TTTTGAGCTTGATTCAAGTTGATGTGATTAAGTTTTAACttgttgataat
ttttttttttcagcttcCAGTCTCACAATCAGAGAACAACAATCCTTTTA
GACCAGCTTGAAGCAGTTCTAGGCCTCACATTCCTACAAACTTGCATTCT
GCATCTGCTCTGACAACTAGGTAACTGTCTCTCGGCCTTCTATTCCCACA
CATAGAAACTCATGTTACTGTTTTTAAAACTATCTTTTACAATCTAAatc
tatataaattattattccattaattaagaaaacaataacTAGAATGTATT
AAGAAAACTATAGGCAAGAGATCTATCAATCATTAGTACTATAGGCAATC
ATTAGTACTATCTTCCCTGTTCCTCCTATTATGAACTTCCGAAATTGCAA
GAGATCTAGCAGAAAATAGCATAAACTGTGCACTGTTGTAATTTATGCAG
CTATGATTATATCATTTCAAAAACTATCCAAAACTTTAAGTTATAAGAAG
ACTTCAAAAATTCACTACCTAAAACTAAGATAGCCTACTAAACTAGCCAA
AAATGTAAAACTGCACTATATCAGCTtaggaaaaattaaagaaaacatct
AGACACGTTTCAATTGGTAAAAAGATAAGGAATAGCTCAAACACCAAAAT
CTggataaaacttaaaatttgacTATCTAAGACTTACACTAGACTACAAT
AGGCTAAAACTGCAAAATCTGAGAATTGAACTAAACTAGTATTTAGAAAT
GCTAAACAACTACCTAGGCACATTCTAAATGacataaagaaagtaaaaac
taaggtaaaattaaaacaaactacCTAGACACATTCTAAATGATATACGA
CACCTAAAACAGTAGCTAACCTATTTACACAACTGCACTAAACTGTCCTA
GAAGGAAGTAAGACAACtgtcctaacaagtttaaaatggtAAAATCTAGC
TAAGAAACAACTCAACTTACCAAATATACCTAGAACTCAAAATATGACTA
CTTAAGACCTAAAATTAGTAACTAAAACGGGCTAAAAGTGCTAAAACTAA
TAACTGTACTCGACTACTAGTTGAAACTGTAAAGTAACTATCTAGGCAAC
TTTTGAATGATAAAAGGAAGATAAAAATCATGTCAcaattcaaaaataac
aaaaaaaaaatcaaagtttcacTGGTTGAGACTtacaaaattatgttaaa
agtaAGTTAAAGCTAAGGGCTGCACTAAAACACTAAAAGAAACCATATTT
AAACTGCCTATTCAAGTTTTAAAGGGCTAAGAATAACCAAAAATTGACTG
CAGAACTAATTCGccataaaacttaaaaaactcACTacctaaatttgaaa
attcattAAGACCAAGTAGTAAACACTCACACAAGAGCAAAGCTCACAAA
AGCATGCTAAGGTGTCTCAAATTCATTATTAATCAACCTTTTACATCTAT
TCTAGAGGCTCCCTGAAATAGGCATGGATCCTCTTagcaaatataaaatg
ttatgtCCTAGAAACTAGAGCAACCTAGGCAACCCATGCTCTCTTCCTTG
CTCTCCAAGAGTGACCAAGCCATCTAGAAGGTCAACAAAAGTCTCCCTTG
CTCTGCAAGGCCTCTCCCACGTTTATTACCATCTAGAAGGTCAACCAAGC
TCCTCTCCTCTACAAATGCAGCCCCCACATGTTGGGCCAACCTTCACGCC
CTTTCTTGCTCCATCTAGGTGCGCCCCTTAGGAAACTAAGGGTGTCCAAG
AGCAATCCTACAAAAAGAAAGGAGTAATTCACGCGTCTATAATTTATTCT
aagacaagaagaagaaaaactaaaccaaataaaagaaagaaggtGAAGAA
ACTTCTCTCCTAAACAAGCTTATTTTCCCCAAGCATGTACCTTCATCCTT
GGTAGGGGTTAGGAGCTCATCATGACCTAACCCACTAGTTTCTAACTTTC
ACTGCCCTATCTATGAAATgaacaagagaaagaaaatgggaaagtaGAGA
GATCTCAGAGGCTGTCCAGGACAATCAACTGAGAGCGGAAATGAGAACCA
CCGAATCACAAAATTGTTACCTCGGTGTGTTTTGCATAAATCAAGACCAA
GAAACAAACATTCAATGTCGTTTTTACAAGAGAGATTCATCCTATATGGA
TTTTTACAACAAAGTATAGGCAAAACATGTGATGTTTAACACTTTTGGAT
CTGCTTTATTGAATTATGAATGTTGATGTTATTGCATCTTAATGTATTGT
CTCTATAGATTGGATAGTATTGAAAGAAAGGAATTGTatttaattgaaag
aaagataaagctaacaacatttcaaatattttcctGGTATACTTGTGTTT
ATTCCAATTACACTTTGTTTCTTTACCTCAAAGGCAGTTTATTTTCATTA
GTGTAGAATCATGGCTAAAGCGGAAGGTGGCAAGGAACCAATAAATGAAC
AAGCAGTTGCAAATATGTATGCTTCTATGAGGTCTGAGCTCAACCAAATT
TACTCCAAAATAACTGAACTGGAGATGGAAGTCAGTGAGCACACATTAGT
CATCAATGCCATTCAGCCTCTTGACCAATCTAGACGATGCTACCGAATGA
TTGGAGGGGTGCTTGTGGAGAGAACCATCAAAGAGGTCTTGCCTGCTGTC
CAGCGAAATAAAGATGGTCTTGAAGAGGTTGTTGCAAGGCTTAATGAGGC
actggaaaagaagaaaaaggaaattacTGAGTTTGAGGCTAAATATAAAA
TCAGGATAAGGAAGGCTGATGCTGAGGTGAAGGATGAATCCGGTAGGAAG
GAAGGGTCTGCCCAAGGAGTTCTTGTGGGTCCTGCTGGTGGAAGTGAATG
ATTTGTCAAATTTTATTGCTTTGTTTCCTCAAACTATTAGCCAAAACTTC
CTGCCTTTACAATTGGGTGGAGGCAGTGCTATGCTTTGCTTTACAGAGTA
TTGACTAAACTATTTACAACTTGATATGACAACCTTCAGTTTAATTGCTT
TGGCTGAAAAGAACCGTTCTTTATTGCGTTTA

Coding sequence (CDS) from alignment at chr08:25730491..25735422+

>rna-XM_014655683.2_VrVC1973A-SNU_v1 ID=rna-XM_014655683.2_VrVC1973A-SNU_v1; Name=rna-XM_014655683.2; organism=Vigna radiata; type=CDS; length=441bp; location=Sequence derived from: chr08:25730491..25735422+ (Vigna radiata
ATGGCTAAAGCGGAAGGTGGCAAGGAACCAATAAATGAACAAGCAGTTGC
AAATATGTATGCTTCTATGAGGTCTGAGCTCAACCAAATTTACTCCAAAA
TAACTGAACTGGAGATGGAAGTCAGTGAGCACACATTAGTCATCAATGCC
ATTCAGCCTCTTGACCAATCTAGACGATGCTACCGAATGATTGGAGGGGT
GCTTGTGGAGAGAACCATCAAAGAGGTCTTGCCTGCTGTCCAGCGAAATA
AAGATGGTCTTGAAGAGGTTGTTGCAAGGCTTAATGAGGCactggaaaag
aagaaaaaggaaattacTGAGTTTGAGGCTAAATATAAAATCAGGATAAG
GAAGGCTGATGCTGAGGTGAAGGATGAATCCGGTAGGAAGGAAGGGTCTG
CCCAAGGAGTTCTTGTGGGTCCTGCTGGTGGAAGTGAATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002777	PFD_beta-like
IPR009053	Prefoldin
IPR027235	PFD2

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex

Search form

rna-XM_014655683.2