rna-XM_004496631.3

Transcript Overview
Namerna-XM_004496631.3
Unique Namerna-XM_004496631.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length498
ProductRING-H2 finger protein ATL47-like
References
External references for this mRNA
DatabaseAccession
GeneID101506187
GenBankXM_004496631.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:13396560..13398533 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cacanL094Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL131Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL341Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL134Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cancanL098Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanL124Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0445Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0406Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0443Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR339Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR343Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR367Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR268Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR231Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR287Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvrvR311Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvfhR240Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR246Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR353Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR257Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvssR262Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR307Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR349Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvuaR210Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR210Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR223Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR238Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR266Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR266Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR245Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canpsR265Pisum sativum Cameor genome v1aPisum sativum
canpsR284Pisum sativum Cameor genome v1aPisum sativum
avjcanL310Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL418Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR210Cicer arietinum
cancarR212Cicer arietinum
cancarR222Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g142480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-KK1_007689Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Tiffany.R1.3g114080.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cr_08479.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat6g205400.1Pisum sativum Cameor genome v1aPisum sativum
jg40938.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan02g221600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va02G066130.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014657231.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun07g235900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr07.535Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat06G0556200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Phvul.007G061000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_04561Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101506187gene-LOC101506187_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004496631.3-2exon-XM_004496631.3-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004496631.3-1exon-XM_004496631.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004496688.1cds-XP_004496688.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_004496688.1cds-XP_004496688.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004496631.3_CaCDCfrontier-NCBI_v1rna-XM_004496631.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004496631.3_CaCDCfrontier-NCBI_v1rna-XM_004496631.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_004496631.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:6797687-6798815 FORWARD LENGTH=196)

HSP 1 Score: 71.2478 bits (173), Expect = 1.393e-15
Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = 0 
Query:   48 LDENAFKAKQRLRKKLGY--FLSSSGSSEQNPKKEGK-ETKSTFEKKDVGLGR---KLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMV 162
            LD  A +AKQRL K+L        +G  + N  ++GK +       + VGL +   +L+E  W  R  R   E++ CA+CL+ F++ + +++L C+HK+HS CLLPWL  N +CP CRT +
Sbjct:   79 LDGAAKEAKQRLNKRLRIPPRTRQNGKDKGNKLEQGKGKPLGDLPTEVVGLKKSRGRLME--WFKRRVR---EQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194
[Close]
BLAST of rna-XM_004496631.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:18455326-18456444 REVERSE LENGTH=250)

HSP 1 Score: 63.5438 bits (153), Expect = 2.043e-12
Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 0 
Query:  111 LKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMV 162
            +K E + C++CLE F +   +++L C+H +HS+CL PWLRA   CPCCR  +
Sbjct:  196 VKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCLNPWLRACGDCPCCRRAI 247
[Close]
BLAST of rna-XM_004496631.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:21716920-21717892 REVERSE LENGTH=238)

HSP 1 Score: 58.9214 bits (141), Expect = 9.050e-11
Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 0 
Query:  112 KKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMV 162
            +++ K C+VCLEDF+  + VM   C H +H  C++PWL+    CP CR ++
Sbjct:  138 EEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVI 188
[Close]
BLAST of rna-XM_004496631.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:21716920-21717892 REVERSE LENGTH=258)

HSP 1 Score: 58.9214 bits (141), Expect = 9.442e-11
Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 0 
Query:  112 KKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMV 162
            +++ K C+VCLEDF+  + VM   C H +H  C++PWL+    CP CR ++
Sbjct:  158 EEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVI 208
[Close]
BLAST of rna-XM_004496631.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:21716920-21717908 REVERSE LENGTH=266)

HSP 1 Score: 58.9214 bits (141), Expect = 9.879e-11
Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 0 
Query:  112 KKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMV 162
            +++ K C+VCLEDF+  + VM   C H +H  C++PWL+    CP CR ++
Sbjct:  166 EEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVI 216
[Close]
BLAST of rna-XM_004496631.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:21716544-21717908 REVERSE LENGTH=317)

HSP 1 Score: 58.9214 bits (141), Expect = 1.310e-10
Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 0 
Query:  112 KKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMV 162
            +++ K C+VCLEDF+  + VM   C H +H  C++PWL+    CP CR ++
Sbjct:  166 EEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVI 216
[Close]
BLAST of rna-XM_004496631.3 vs. Araport11
Match: | (Symbols: BTL08 | BCA2####zinc finger ATL 8 | chr3:6942679-6943839 FORWARD LENGTH=386)

HSP 1 Score: 58.5362 bits (140), Expect = 1.825e-10
Identity = 22/51 (43.14%), Postives = 31/51 (60.78%), Query Frame = 0 
Query:  109 NRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCR 159
            + LK E   CAVC+++F+   +V  + C H +H  CLLPWL  +  CP CR
Sbjct:  265 DMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 315
[Close]
BLAST of rna-XM_004496631.3 vs. Araport11
Match: | (Symbols: BTL08 | BCA2####zinc finger ATL 8 | chr3:6942679-6943839 FORWARD LENGTH=386)

HSP 1 Score: 58.5362 bits (140), Expect = 1.825e-10
Identity = 22/51 (43.14%), Postives = 31/51 (60.78%), Query Frame = 0 
Query:  109 NRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCR 159
            + LK E   CAVC+++F+   +V  + C H +H  CLLPWL  +  CP CR
Sbjct:  265 DMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 315
[Close]
BLAST of rna-XM_004496631.3 vs. Araport11
Match: | (Symbols: BTL07 | BCA2####zinc finger ATL 7 | chr3:4367754-4368701 FORWARD LENGTH=315)

HSP 1 Score: 58.5362 bits (140), Expect = 2.035e-10
Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:  118 CAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMV 162
            C+VCL+DF+   E   + C HK+HS CLLPWL  +  CP CR ++
Sbjct:  225 CSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLL 269
[Close]
BLAST of rna-XM_004496631.3 vs. Araport11
Match: | (Symbols: BTL07 | BCA2####zinc finger ATL 7 | chr3:4367754-4368701 FORWARD LENGTH=315)

HSP 1 Score: 58.5362 bits (140), Expect = 2.035e-10
Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:  118 CAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMV 162
            C+VCL+DF+   E   + C HK+HS CLLPWL  +  CP CR ++
Sbjct:  225 CSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLL 269
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q852U6|RHY1A_ARATH (Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RHY1A PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.996e-11
Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 0 
Query:  111 LKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMV 162
            +K E + C++CLE F +   +++L C+H +HS+CL PWLRA   CPCCR  +
Sbjct:  196 VKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCLNPWLRACGDCPCCRRAI 247
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.062e-9
Identity = 23/50 (46.00%), Postives = 29/50 (58.00%), Query Frame = 0 
Query:  110 RLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCR 159
             L  E   CAVC++DF++  E   + C H YH  CLLPWL  +  CP CR
Sbjct:  216 NLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCR 265
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 2.335e-9
Identity = 22/51 (43.14%), Postives = 31/51 (60.78%), Query Frame = 0 
Query:  109 NRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCR 159
            + LK E   CAVC+++F+   +V  + C H +H  CLLPWL  +  CP CR
Sbjct:  207 DMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 257
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GW38|ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 3.902e-9
Identity = 37/113 (32.74%), Postives = 57/113 (50.44%), Query Frame = 0 
Query:   55 AKQRLRKKLGYFLSSSGSSEQNPKKEGKET-----KSTFEKKDVGLGRKLLES--TWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNL-SCSHKYHSACLLPWLRANPHCPCCR 159
             +  L+KK     SS   S QNP+    +T     +  F   D GL + L+++   +L +  +  KE   CAVCL +F +  ++  L +CSH +H  C+  WL +N  CP CR
Sbjct:   74 VRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C1X4|YKW3_SCHPO (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.438e-9
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 0 
Query:  111 LKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEPS 165
            L  E+  C +C+E F+ + +V+ L C H +H  C+ PWLR N  C  CR  V+P+
Sbjct:  389 LIDEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPVDPN 443
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q6AVN2|SIRP1_ORYSJ (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.934e-8
Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 0 
Query:  111 LKKEKKV-CAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCR 159
            +K E+ V C+VCL+D +   +   + C HK+HS+C+LPWL  +  CP CR
Sbjct:  191 VKIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCR 240
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/Swiss-Prot
Match: sp|P0DPR2|RNF43_XENTR (E3 ubiquitin-protein ligase RNF43 OS=Xenopus tropicalis OX=8364 GN=rnf43 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 3.271e-8
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0 
Query:  117 VCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCC 158
            VCA+CLE+F   +E+  L C H+YH  C+ PWLR N  CP C
Sbjct:  267 VCAICLEEFTDGQELRILPCCHEYHLGCVDPWLRQNHTCPLC 308
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9H0F5|RNF38_HUMAN (E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens OX=9606 GN=RNF38 PE=1 SV=4)

HSP 1 Score: 54.299 bits (129), Expect = 6.827e-8
Identity = 25/74 (33.78%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:   89 EKKDVGLGRKLLE--STWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRT 160
            E K  GL +  +E   ++    N  + E+ +C VC+ DF+  + +  L C+H++H+ C+  WL+AN  CP CR 
Sbjct:  432 EAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRA 505
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q5RF74|RN128_PONAB (E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii OX=9601 GN=RNF128 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 1.019e-7
Identity = 28/98 (28.57%), Postives = 52/98 (53.06%), Query Frame = 0 
Query:   63 LGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNR-LKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCR 159
            +GYF+  S    +N + + ++ +         +GR  L +  L +G+R +  +   CAVC+E ++ +  V  L+C+H +H  C+ PWL  +  CP C+
Sbjct:  223 VGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRT--LKQGDREIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCK 318
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9Y4L5|RN115_HUMAN (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 1.332e-7
Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 0 
Query:  118 CAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCR 159
            C VC ED+   +EV  L C+H +HS+C++PWL  +  CP CR
Sbjct:  228 CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCR 269
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XZ05|A0A1S2XZ05_CICAR (RING-H2 finger protein ATL47-like OS=Cicer arietinum OX=3827 GN=LOC101506187 PE=4 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 8.510e-119
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 
Query:    1 MAGRLPGVGLPPRKKSQLNIRHEHCVTYRDSNLSESLDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEPS 165
            MAGRLPGVGLPPRKKSQLNIRHEHCVTYRDSNLSESLDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEPS
Sbjct:    1 MAGRLPGVGLPPRKKSQLNIRHEHCVTYRDSNLSESLDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEPS 165
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/TrEMBL
Match: tr|A0A072VPT0|A0A072VPT0_MEDTR (Zinc finger, C3HC4 type (RING finger) protein OS=Medicago truncatula OX=3880 GN=25485152 PE=4 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 2.784e-88
Identity = 129/165 (78.18%), Postives = 143/165 (86.67%), Query Frame = 0 
Query:    1 MAGRLPGVGLPPRKKSQ-LNIRHEHCVTYRDSNLSESLDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEP 164
            MAGRLPGVGL PRK+S+  + RHEH  TYRDS L ESLDAPWTS+TTTLDE AFKAKQRL+KKLG+F SSS SSE NPKKEGKE    F+KKD GLGRKLLES+WLLRGN+ KKE+K+CAVCLEDFQQ +EVMNLSCSHKYHSACLLPWL  +PHCP CRT+VEP
Sbjct:    1 MAGRLPGVGLSPRKRSEHYHNRHEHYATYRDSYLKESLDAPWTSMTTTLDETAFKAKQRLQKKLGHFFSSSRSSEHNPKKEGKE----FQKKDAGLGRKLLESSWLLRGNKFKKERKICAVCLEDFQQDEEVMNLSCSHKYHSACLLPWLETHPHCPYCRTIVEP 161
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/TrEMBL
Match: tr|B7FF93|B7FF93_MEDTR (RING-type domain-containing protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 1.507e-86
Identity = 127/165 (76.97%), Postives = 142/165 (86.06%), Query Frame = 0 
Query:    1 MAGRLPGVGLPPRKKSQ-LNIRHEHCVTYRDSNLSESLDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEP 164
            MAGRLPGVGL PRK+S+  + RHEH  TYRDS L ESLDAPWTS+TTTLDE AFKAKQRL+KKLG+F SSS SSE NPKKEGKE    F+KKD GLGRKLLES+WLLRGN+ KKE+K+CAVCLEDF Q +EVMNLSCSHKYHSACLLPWL  +PHCP CRT+V+P
Sbjct:    1 MAGRLPGVGLSPRKRSEHYHNRHEHYATYRDSYLKESLDAPWTSMTTTLDETAFKAKQRLQKKLGHFFSSSRSSEHNPKKEGKE----FQKKDAGLGRKLLESSWLLRGNKFKKERKICAVCLEDFLQDEEVMNLSCSHKYHSACLLPWLETHPHCPYCRTIVDP 161
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BLAST of rna-XM_004496631.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WFR9|A0A9D4WFR9_PEA (RING-type domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065562 PE=4 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.793e-81
Identity = 124/165 (75.15%), Postives = 139/165 (84.24%), Query Frame = 0 
Query:    1 MAGRLPGVGLPPRKKS-QLNIRHEHCVTYRDSNLSESLDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEP 164
            MAGRLPGVGL PRKKS Q + RHE+    +    S  LDAPWTS+T TLDENAFKAKQRL KKLGYF SSS S+E+NPKK G+E+KS F+KKDVGLGRKLLES WLLRGNR KKE+ VCAVCLEDF Q++E+MNLSCSHKYHSACLLPWL  +PHCPCCRTMV+P
Sbjct:    1 MAGRLPGVGLSPRKKSEQHHNRHENYAIRK----SLDLDAPWTSMTNTLDENAFKAKQRLEKKLGYFFSSSRSNEENPKK-GEESKSRFQKKDVGLGRKLLESAWLLRGNRFKKERNVCAVCLEDFHQNEEIMNLSCSHKYHSACLLPWLERHPHCPCCRTMVQP 160
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BLAST of rna-XM_004496631.3 vs. UniProtKB/TrEMBL
Match: tr|C6T4N4|C6T4N4_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100527548 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.796e-67
Identity = 111/168 (66.07%), Postives = 133/168 (79.17%), Query Frame = 0 
Query:    1 MAGRLPGVGLPPRKKSQLNIR--HEHCVTYRDS-NLSES-LDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEP 164
            MAGRLPGVGL  RK+++ N R  H+H  T R S +L ES L+ PW  +T  LDE A KA+QRL KKLG+F SS  SSE NP+KEGK  +S++EKKD G+GRKLLES+WLLRGN+ KK++KVCAVCLED  Q ++VMNLSCSHKYHSACLLPWL A+PHCP CRT V+P
Sbjct:    1 MAGRLPGVGLLARKRTEQNHRYEHQHHATCRQSYHLGESSLEPPWIPLTV-LDETALKARQRLHKKLGHFFSSYRSSE-NPRKEGKVNQSSYEKKDGGIGRKLLESSWLLRGNKFKKDRKVCAVCLEDLGQEQQVMNLSCSHKYHSACLLPWLAAHPHCPYCRTPVQP 166
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BLAST of rna-XM_004496631.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445F5E2|A0A445F5E2_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_054164 PE=4 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.955e-67
Identity = 110/168 (65.48%), Postives = 133/168 (79.17%), Query Frame = 0 
Query:    1 MAGRLPGVGLPPRKKSQLNIR--HEHCVTYRDS-NLSES-LDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEP 164
            MAGRLPGVGL  RK+++ N R  H+H  T R S +L ES L+ PW  +T  LDE A KA+QRL KKLG+F SS  SSE NP+KEGK  +S++EKKD G+GRKLLES+WLLRGN+ KK++KVCAVCLED  Q +++MNLSCSHKYHSACLLPWL A+PHCP CRT V+P
Sbjct:    1 MAGRLPGVGLLARKRTEQNHRYEHQHHATCRQSYHLGESSLEPPWIPLTV-LDETALKARQRLHKKLGHFFSSYRSSE-NPRKEGKVNQSSYEKKDGGIGRKLLESSWLLRGNKFKKDRKVCAVCLEDLGQEQQLMNLSCSHKYHSACLLPWLAAHPHCPYCRTPVQP 166
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/TrEMBL
Match: tr|A0A396K112|A0A396K112_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0204861 PE=4 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.203e-63
Identity = 101/132 (76.52%), Postives = 113/132 (85.61%), Query Frame = 0 
Query:    1 MAGRLPGVGLPPRKKSQ-LNIRHEHCVTYRDSNLSESLDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEV 131
            MAGRLPGVGL PRK+S+  + RHEH  TYRDS L ESLDAPWTS+TTTLDE AFKAKQRL+KKLG+F SSS SSE NPKKEGKE    F+KKD GLGRKLLES+WLLRGN+ KKE+K+CAVCLEDFQQ +EV
Sbjct:    1 MAGRLPGVGLSPRKRSEHYHNRHEHYATYRDSYLKESLDAPWTSMTTTLDETAFKAKQRLQKKLGHFFSSSRSSEHNPKKEGKE----FQKKDAGLGRKLLESSWLLRGNKFKKERKICAVCLEDFQQDEEV 128
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/TrEMBL
Match: tr|I1LE19|I1LE19_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100817134 PE=4 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.475e-62
Identity = 104/170 (61.18%), Postives = 126/170 (74.12%), Query Frame = 0 
Query:    1 MAGRLPGVGLPPRKKSQLNIRHEH-----CVTYRDSNLSESLDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEPS 165
            MAGRLPGVGL  RK+++ N R+EH     C        S S D PW  +T  LDE A KA+QRL KKL +F SS  SSE NP+KEGK +++ +EKKD G+GRKLLE +WLLRGN+LKK++KVCAVCLED    ++VMNLSCSHKYHSACLL WL ++PHCP CRT V+PS
Sbjct:    1 MAGRLPGVGLLARKRTEKNYRYEHQYLPTCRHSYYPRESSSFDPPWIPLTV-LDETALKARQRLHKKLEHFFSSYRSSE-NPRKEGKVSQNRYEKKDGGIGRKLLECSWLLRGNKLKKDRKVCAVCLEDLGLEQQVMNLSCSHKYHSACLLRWLASHPHCPYCRTPVQPS 168
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445IS82|A0A445IS82_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_028018 PE=4 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.791e-62
Identity = 104/170 (61.18%), Postives = 126/170 (74.12%), Query Frame = 0 
Query:    1 MAGRLPGVGLPPRKKSQLNIRHEH-----CVTYRDSNLSESLDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEPS 165
            MAGRLPGVGL  RK+++ N R+EH     C        S S D PW  +T  LDE A KA+QRL KKL +F SS  SSE NP+KEGK +++ +EKKD G+GRKLLE +WLLRGN+LKK++KVCAVCLED    ++VMNLSCSHKYHSACLL WL ++PHCP CRT V+PS
Sbjct:    1 MAGRLPGVGLLARKRTEKNYRYEHQYLPTCRHSYYPRESSSFDPPWIPLTV-LDETALKARQRLHKKLEHFFSSYRSSE-NPRKEGKVSQNRYEKKDGGIGRKLLECSWLLRGNKLKKDRKVCAVCLEDLGLEQQVMNLSCSHKYHSACLLRWLASHPHCPYCRTPVQPS 168
[Close]
BLAST of rna-XM_004496631.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8ME71|A0A8B8ME71_ABRPR (E3 ubiquitin-protein ligase RNF38-like OS=Abrus precatorius OX=3816 GN=LOC113873090 PE=4 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.243e-62
Identity = 113/168 (67.26%), Postives = 137/168 (81.55%), Query Frame = 0 
Query:    1 MAGRLPGVGLPPRKKSQLNIRHEHCVTYRDSNLSE--SLDAPWTSITTTLDENAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEK-KDVGLGRKLLESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLRANPHCPCCRTMVEPS 165
            MAGRLPGVGL PRK+++   R+EH  TYR S+  +  SL+ PW SI+  LD+ A KA+QRL+KKLG+F SSS SSE++ KKEGKE++S  ++ KDVGLGRKLLES+WLLR N+ KKE+KVCAVCLED QQ ++VMNLSCSHKYHSACLLPWL  +PHCP CRT VEPS
Sbjct:    1 MAGRLPGVGLLPRKRTEQPHRYEHHATYRHSHPRDESSLEPPWLSISV-LDDTALKARQRLQKKLGHFFSSSRSSEKS-KKEGKESQSNKQRQKDVGLGRKLLESSWLLRPNKFKKERKVCAVCLEDCQQQQQVMNLSCSHKYHSACLLPWLATHPHCPYCRTPVEPS 166
The following BLAST results are available for this feature:
BLAST of rna-XM_004496631.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|1.393e-1538.02Symbols: no symbol available | no full name availa... [more]
|2.043e-1246.15Symbols: no symbol available | no full name availa... [more]
|9.050e-1141.18Symbols: no symbol available | no full name availa... [more]
|9.442e-1141.18Symbols: no symbol available | no full name availa... [more]
|9.879e-1141.18Symbols: no symbol available | no full name availa... [more]
|1.310e-1041.18Symbols: no symbol available | no full name availa... [more]
|1.825e-1043.14Symbols: BTL08 | BCA2####zinc finger ATL 8 | chr3:... [more]
|1.825e-1043.14Symbols: BTL08 | BCA2####zinc finger ATL 8 | chr3:... [more]
|2.035e-1048.89Symbols: BTL07 | BCA2####zinc finger ATL 7 | chr3:... [more]
|2.035e-1048.89Symbols: BTL07 | BCA2####zinc finger ATL 7 | chr3:... [more]
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BLAST of rna-XM_004496631.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q852U6|RHY1A_ARATH1.996e-1146.15Probable E3 ubiquitin-protein ligase RHY1A OS=Arab... [more]
sp|P0CH30|RING1_GOSHI1.062e-946.00E3 ubiquitin-protein ligase RING1 OS=Gossypium hir... [more]
sp|Q8LPN7|RNG1L_ARATH2.335e-943.14E3 ubiquitin-protein ligase RING1-like OS=Arabidop... [more]
sp|Q8GW38|ATL47_ARATH3.902e-932.74RING-H2 finger protein ATL47 OS=Arabidopsis thalia... [more]
sp|Q9C1X4|YKW3_SCHPO9.438e-940.00Uncharacterized RING finger protein P32A8.03c OS=S... [more]
sp|Q6AVN2|SIRP1_ORYSJ1.934e-844.00E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa ... [more]
sp|P0DPR2|RNF43_XENTR3.271e-852.38E3 ubiquitin-protein ligase RNF43 OS=Xenopus tropi... [more]
sp|Q9H0F5|RNF38_HUMAN6.827e-833.78E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens ... [more]
sp|Q5RF74|RN128_PONAB1.019e-728.57E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii... [more]
sp|Q9Y4L5|RN115_HUMAN1.332e-747.62E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens... [more]
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BLAST of rna-XM_004496631.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XZ05|A0A1S2XZ05_CICAR8.510e-119100.00RING-H2 finger protein ATL47-like OS=Cicer arietin... [more]
tr|A0A072VPT0|A0A072VPT0_MEDTR2.784e-8878.18Zinc finger, C3HC4 type (RING finger) protein OS=M... [more]
tr|B7FF93|B7FF93_MEDTR1.507e-8676.97RING-type domain-containing protein OS=Medicago tr... [more]
tr|A0A9D4WFR9|A0A9D4WFR9_PEA1.793e-8175.15RING-type domain-containing protein OS=Pisum sativ... [more]
tr|C6T4N4|C6T4N4_SOYBN2.796e-6766.07RING-type domain-containing protein OS=Glycine max... [more]
tr|A0A445F5E2|A0A445F5E2_GLYSO9.955e-6765.48RING-type domain-containing protein OS=Glycine soj... [more]
tr|A0A396K112|A0A396K112_MEDTR1.203e-6376.52Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|I1LE19|I1LE19_SOYBN2.475e-6261.18RING-type domain-containing protein OS=Glycine max... [more]
tr|A0A445IS82|A0A445IS82_GLYSO2.791e-6261.18RING-type domain-containing protein OS=Glycine soj... [more]
tr|A0A8B8ME71|A0A8B8ME71_ABRPR4.243e-6267.26E3 ubiquitin-protein ligase RNF38-like OS=Abrus pr... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 70..164
e-value: 6.2E-18
score: 66.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 117..159
e-value: 6.6E-8
score: 44.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 118..159
score: 12.002429
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 69..161
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 117..159
e-value: 9.31496E-16
score: 65.3731
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 117..163

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004496631.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496631.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496631.3; organism=Cicer arietinum; type=mRNA; length=498bp
ATGGCTGGTAGGCTACCTGGTGTTGGATTGCCACCAAGGAAAAAATCACA
ACTTAACATCAGACATGAACACTGTGTTACCTATAGAGACTCCAATCTAA
GTGAATCATTGGATGCACCATGGACTTCAATCACTACTACCTTAGATGAA
AATGCTTTCAAGGCCAAACAACGCCTTCGCAAGAAGCTTGGTTACTTCTT
ATCCTCTTCCGGGTCAAGTGAACAAAATCCCAAAAAAGAAGGAAAAGAAA
CTAAAAGCACGTTTGAGAAGAAGGATGTTGGATTAGGTAGGAAATTACTT
GAAAGTACATGGTTATTGCGTGGAAACAGGTTGAAGAAAGAGAAAAAAGT
ATGCGCTGTGTGTCTAGAAGATTTTCAGCAACATAAGGAGGTTATGAACC
TTTCTTGCTCCCATAAGTATCATTCTGCATGTCTTCTCCCTTGGCTTCGA
GCAAATCCTCATTGTCCTTGTTGTAGAACCATGGTTGAGCCCTCATAG
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protein sequence of rna-XM_004496631.3_CaCDCfrontier-NCBI_v1

>rna-XM_004496631.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496631.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496631.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=165bp
MAGRLPGVGLPPRKKSQLNIRHEHCVTYRDSNLSESLDAPWTSITTTLDE
NAFKAKQRLRKKLGYFLSSSGSSEQNPKKEGKETKSTFEKKDVGLGRKLL
ESTWLLRGNRLKKEKKVCAVCLEDFQQHKEVMNLSCSHKYHSACLLPWLR
ANPHCPCCRTMVEPS
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mRNA from alignment at chr4:13396560..13398533-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004496631.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496631.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496631.3; organism=Cicer arietinum; type=mRNA; length=1974bp; location=Sequence derived from: chr4:13396560..13398533- (Cicer arietinum
AGTACGTAGAAGCTACCTATATACGATAAACAACCGAATATTAATTGACA
AGTGAAGCAGCTAATGAGAAATCAGACAATATTGAGTTAGTGTCGACAGA
GTAAAAGTTATTATAAATATTGGCTCTTAAAATGAACACTTAAACCGTAA
CTAATACTCCAAAGGGGAATACGACATCTTCAATTCCCACTCTCCGAATG
AATAGTTATGATGCTCTGCTACAGTACTTCAGAGAAAATTGTCTCTCCAT
TTTAGAAGATCCTTTTACGAACCACGTGTTTATTTGTGGACTATAAAAAA
ATCACCCTCCCAAGTCCCAACAATATATTAATTACAAATAAAACTCCTTC
ACAAAATATATGTAAATAGCCACATTCTAGATTATTACACTACCACACCA
CAAAAAGCCAAAATTGAAGCATTATTGCTGACATGTGTACATAAATTGTA
ACAATTCAATGATAACCAACATCCACAGTCATAAGAATTGACCCCTCTTA
AGTTTTGGTATTTACCAAGAGGTAAACAAACTAATAATGTATTGTTCCAA
TAGACCACGCAACTATATTAAACTTGGAAGCATTATTTTTGGTGGGTCTT
ATGAGCCATAAATTGATATGAGAATAATCAAGTAAAGAAGATTGAATGGC
TGGTAGGCTACCTGGTGTTGGATTGCCACCAAGGAAAAAATCACAACTTA
ACATCAGACATGAACACTGTGTTACCTATAGAGACTCCAATCTAAGTGAA
TCATTGGATGCACCATGGACTTCAATCACTACTACCTTAGATGAAAATGC
TTTCAAGGCCAAACAACGCCTTCGCAAGAAGCTTGGTTACTTCTTATCCT
CTTCCGGGTATCTTTTCCTTCCTTTTAATTATTTCATTCATTTCAAAATA
TAAATAAAAATTGATTAAACTTTTTTTCATGTATTTACTTTAAATTTAAT
TTGATTTTACAGTAATAAGAAAAAAAGAATTAGAGCTGGAAGGTGTGAAT
AAATTTTGTACATAGCTTGCTAGAATTTATGCAAATTGTATATATAGTTT
TAGTTAATTTTCCAACGGTTCCTTGTGCACATTCACATGCCTAGTAAGGA
ATTTAATTTTGTTTTTTTTACTCTAAAATGAAGGAAATCAAGGATGATTC
ACATGATTTTATTATGAGGTCATTCTGCATACCTCATTAATGTCGGCTAC
AAGATCAATCCTACCAACTAAATTATTGTCTAAAATCCACGTGATTTCCT
TTGAGATTGATGGGATTTCATTTATTCTTATCAATTTTACTTTCTAATTA
TATTTTCAAAGTACTAAGATAATTTTTATATGCAATTACAAGAAAATTAT
TATTAGAAATTCATAAATTTATATAATAATTATTTTAATATGGTAAACTA
TTGCTTTGTTAGTTTGAGTGTATACTAATGAATAATTATAAGCTCACTTG
CTTATGAGTATGACAGGTCAAGTGAACAAAATCCCAAAAAAGAAGGAAAA
GAAACTAAAAGCACGTTTGAGAAGAAGGATGTTGGATTAGGTAGGAAATT
ACTTGAAAGTACATGGTTATTGCGTGGAAACAGGTTGAAGAAAGAGAAAA
AAGTATGCGCTGTGTGTCTAGAAGATTTTCAGCAACATAAGGAGGTTATG
AACCTTTCTTGCTCCCATAAGTATCATTCTGCATGTCTTCTCCCTTGGCT
TCGAGCAAATCCTCATTGTCCTTGTTGTAGAACCATGGTTGAGCCCTCAT
AGTGTTTACTTGTTAAAGGGTCTATTTGTTTGCAAATTCGCTTGTAATTG
AGATTTATTAAAAAAGAAGTCTCTCAAATTTTCTTAGAGGAAATTGGTCA
TTTATTATGACCAGAGTGCTGACTGTTAGCTTTTTAGTTAGAAGGGATAT
TCAAGCATAGCTCGCTAAATATTCATTTGAATAAGTTATTTATAATCATA
TACTATATACTACTACTCTATTTA
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Coding sequence (CDS) from alignment at chr4:13396560..13398533-

>rna-XM_004496631.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496631.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496631.3; organism=Cicer arietinum; type=CDS; length=498bp; location=Sequence derived from: chr4:13396560..13398533- (Cicer arietinum
ATGGCTGGTAGGCTACCTGGTGTTGGATTGCCACCAAGGAAAAAATCACA
ACTTAACATCAGACATGAACACTGTGTTACCTATAGAGACTCCAATCTAA
GTGAATCATTGGATGCACCATGGACTTCAATCACTACTACCTTAGATGAA
AATGCTTTCAAGGCCAAACAACGCCTTCGCAAGAAGCTTGGTTACTTCTT
ATCCTCTTCCGGGTCAAGTGAACAAAATCCCAAAAAAGAAGGAAAAGAAA
CTAAAAGCACGTTTGAGAAGAAGGATGTTGGATTAGGTAGGAAATTACTT
GAAAGTACATGGTTATTGCGTGGAAACAGGTTGAAGAAAGAGAAAAAAGT
ATGCGCTGTGTGTCTAGAAGATTTTCAGCAACATAAGGAGGTTATGAACC
TTTCTTGCTCCCATAAGTATCATTCTGCATGTCTTCTCCCTTGGCTTCGA
GCAAATCCTCATTGTCCTTGTTGTAGAACCATGGTTGAGCCCTCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING