rna-XM_004497538.3
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004497538.3 vs. Araport11
Match: | (Symbols: SAUR49 | SMALL AUXIN UPREGULATED RNA 49 | chr4:16577566-16578018 FORWARD LENGTH=150) HSP 1 Score: 100.523 bits (249), Expect = 6.835e-28 Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 0 Query: 1 MTWMWRKNACSGNGKKLP-SDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL 84
M W+K A G+ P SDVP GH+AV+VGE RR+V+RA +LNHP+ ++LL EA E YGF GPLAIPCDE LFEDI+ +
Sbjct: 16 MLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIV 100
BLAST of rna-XM_004497538.3 vs. Araport11
Match: | (Symbols: SAUR49 | SMALL AUXIN UPREGULATED RNA 49 | chr4:16577566-16578018 FORWARD LENGTH=150) HSP 1 Score: 100.523 bits (249), Expect = 6.835e-28 Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 0 Query: 1 MTWMWRKNACSGNGKKLP-SDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL 84
M W+K A G+ P SDVP GH+AV+VGE RR+V+RA +LNHP+ ++LL EA E YGF GPLAIPCDE LFEDI+ +
Sbjct: 16 MLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIV 100
BLAST of rna-XM_004497538.3 vs. Araport11
Match: | (Symbols: SAUR53 | SMALL AUXIN UPREGULATED RNA 53 | chr1:6872794-6873255 REVERSE LENGTH=153) HSP 1 Score: 95.1301 bits (235), Expect = 9.645e-26 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 0 Query: 1 MTWMWRKNA-CSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL 84
M WR A S + +PSDVP GH+AV VG RRFV+RA YLNHP++ LL +A E +GF GPL IPC+E +FE+ + F+
Sbjct: 20 MLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVRASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFI 104
BLAST of rna-XM_004497538.3 vs. Araport11
Match: | (Symbols: SAUR52 | SMALL AUXIN UPREGULATED RNA 52 | chr1:28383250-28383714 REVERSE LENGTH=154) HSP 1 Score: 93.9745 bits (232), Expect = 2.800e-25 Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = 0 Query: 1 MTWMWRKNA--CSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL 84
M WR A S + +PSDVP GH+AV VG + RRFV+RA YLNHPVL+ LL +A E +GF GPL IPC+E +FE+ + F+
Sbjct: 20 MLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVVRATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFI 105
BLAST of rna-XM_004497538.3 vs. Araport11
Match: | (Symbols: SAUR69 | SMALL AUXIN UPREGULATED RNA 69 | chr5:3476884-3477330 FORWARD LENGTH=148) HSP 1 Score: 92.0485 bits (227), Expect = 1.417e-24 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 0 Query: 1 MTWMWRKNA-CSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL 84
M WR A S + +PSDVP GH+AV VG + RRFV+ A YLNHP+L LL +A E +GF GPL IPC+E +FE+ + F+
Sbjct: 20 MLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVLATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFI 104
BLAST of rna-XM_004497538.3 vs. Araport11
Match: | (Symbols: SAUR46 | SMALL AUXIN UPREGULATED RNA 46 | chr2:15553732-15554106 FORWARD LENGTH=124) HSP 1 Score: 82.4185 bits (202), Expect = 4.231e-21 Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 0 Query: 1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTH 89
+ W ++K A + +P DVP+GHL V VGE +RFVI + L HP+ Q LLD+A + YGF+ L IPC+E F D++ G H
Sbjct: 34 ICWAFKKEA-----EVIPRDVPKGHLVVYVGEEYKRFVININLLKHPLFQALLDQAQDAYGFSADSRLWIPCNESTFLDVVRCAGAPQH 117
BLAST of rna-XM_004497538.3 vs. Araport11
Match: | (Symbols: SAUR40 | SMALL AUXIN UPREGULATED 40 | chr1:29771319-29771723 FORWARD LENGTH=134) HSP 1 Score: 73.1738 bits (178), Expect = 2.021e-17 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0 Query: 17 LPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGG 87
+ S VP GH+ V VGE RFV+ A+ LNHPV LL+ + + YG+ + G L IPC+ F+FE ++ L G
Sbjct: 44 VASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESLRSG 114
BLAST of rna-XM_004497538.3 vs. Araport11
Match: | (Symbols: SAUR57 | SMALL AUXIN UPREGULATED RNA 57 | chr3:19742923-19743297 FORWARD LENGTH=124) HSP 1 Score: 72.4034 bits (176), Expect = 2.936e-17 Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 0 Query: 17 LPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQ 91
+P DVPRGHL V VG+ +RFVI+ L HP+ + LLD+A + Y S L IPCDE F D++ G H +
Sbjct: 48 IPKDVPRGHLVVYVGDDYKRFVIKMSLLTHPIFKALLDQAQDAYN---SSRLWIPCDENTFLDVVRCSGAPQHQR 119
BLAST of rna-XM_004497538.3 vs. Araport11
Match: | (Symbols: SAUR57 | SMALL AUXIN UPREGULATED RNA 57 | chr3:19742830-19743297 FORWARD LENGTH=155) HSP 1 Score: 72.7886 bits (177), Expect = 4.757e-17 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 0 Query: 1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQ 91
++W ++K + +P DVPRGHL V VG+ +RFVI+ L HP+ + LLD+A + Y S L IPCDE F D++ G H +
Sbjct: 68 VSWGFKKE-----NEAIPKDVPRGHLVVYVGDDYKRFVIKMSLLTHPIFKALLDQAQDAYN---SSRLWIPCDENTFLDVVRCSGAPQHQR 150
BLAST of rna-XM_004497538.3 vs. Araport11
Match: | (Symbols: SAUR12 | SMALL AUXIN UPREGULATED RNA 12 | chr2:9089380-9089694 FORWARD LENGTH=104) HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-16 Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 0 Query: 7 KNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLG 85
KN C + LP DVP+GH V VGE R+++ +L HP + LL +A E +GFN L IPC+E +F + +G
Sbjct: 27 KNQCY-DEDGLPVDVPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMIG 104
BLAST of rna-XM_004497538.3 vs. UniProtKB/Swiss-Prot
Match: sp|O64538|SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.946e-16 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0 Query: 17 LPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGG 87
+ S VP GH+ V VGE RFV+ A+ LNHPV LL+ + + YG+ + G L IPC+ F+FE ++ L G
Sbjct: 44 VASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESLRSG 114
BLAST of rna-XM_004497538.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SIG9|SAU12_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 12 OS=Arabidopsis thaliana OX=3702 GN=SAUR12 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-15 Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 0 Query: 7 KNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLG 85
KN C + LP DVP+GH V VGE R+++ +L HP + LL +A E +GFN L IPC+E +F + +G
Sbjct: 27 KNQCY-DEDGLPVDVPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMIG 104
BLAST of rna-XM_004497538.3 vs. UniProtKB/Swiss-Prot
Match: sp|O65695|SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.771e-15 Identity = 34/84 (40.48%), Postives = 45/84 (53.57%), Query Frame = 0 Query: 10 CSGNGKK---------LPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL 84
CS GKK LP DVP+GH V VGE R+++ +L HP Q LL A E +GF+ L IPCDE +F+ + +
Sbjct: 23 CSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106
BLAST of rna-XM_004497538.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LTV3|SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.003e-15 Identity = 33/81 (40.74%), Postives = 48/81 (59.26%), Query Frame = 0 Query: 7 KNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGG 87
+++ + KK S VP GH+ V VG+ RFV+ A+ LNHPV LL+ + + YG+ + G L IPC +FE I+ L G
Sbjct: 36 RSSVTRRSKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIMESLRLG 116
BLAST of rna-XM_004497538.3 vs. UniProtKB/Swiss-Prot
Match: sp|P33083|AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.261e-14 Identity = 38/81 (46.91%), Postives = 48/81 (59.26%), Query Frame = 0 Query: 6 RKNACSGN-GKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNK-SGPLAIPCDEFLFEDILHFL 84
RK + S N DV +G+LAV VGE RRFVI YLN P Q LL +A E +G++ +G L IPC E +F+ I FL
Sbjct: 9 RKASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFL 89
BLAST of rna-XM_004497538.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SGU2|SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 3.674e-14 Identity = 36/86 (41.86%), Postives = 47/86 (54.65%), Query Frame = 0 Query: 4 MWRKNACSGNGKKLP--SDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGG 87
+ R + G KK S VP GH+ V VG RFV+ A+ LNHPV LL ++ + YG+ + G L IPC +FE IL L G
Sbjct: 19 LLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESLRLG 104
BLAST of rna-XM_004497538.3 vs. UniProtKB/Swiss-Prot
Match: sp|P0DKL1|SAU50_HELAN (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 2.402e-13 Identity = 31/73 (42.47%), Postives = 40/73 (54.79%), Query Frame = 0 Query: 10 CSGNGKK-----LPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLF 77
CS GK LP+DVP+GH V VGE R+++ L+HP Q LL + E +GFN + IPC E F
Sbjct: 23 CSSFGKNNDDSGLPNDVPKGHFVVYVGERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDF 95
BLAST of rna-XM_004497538.3 vs. UniProtKB/Swiss-Prot
Match: sp|P33081|AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 5.276e-13 Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 0 Query: 19 SDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFN-KSGPLAIPCDEFLFEDILHFL 84
+D P+G+LAV VGE +RFVI YLN P Q LL +A E +G++ G L IPC E +F+ I L
Sbjct: 15 ADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCL 81
BLAST of rna-XM_004497538.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9T0J3|SAU16_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 16 OS=Arabidopsis thaliana OX=3702 GN=SAUR16 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 5.478e-13 Identity = 33/76 (43.42%), Postives = 43/76 (56.58%), Query Frame = 0 Query: 10 CSGNGKK-------LPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGF-NKSGPLAIPCDEFLF 77
CS GKK LP DVP+GH V VGE R+++ +L HP LL +A E +GF + G L IPC+E +F
Sbjct: 22 CSSLGKKQCYDEEGLPLDVPKGHFPVYVGEKRTRYIVPISFLTHPEFLILLQQAEEEFGFRHDMGGLTIPCEEVVF 97
BLAST of rna-XM_004497538.3 vs. UniProtKB/Swiss-Prot
Match: sp|P32295|ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 6.205e-13 Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 0 Query: 20 DVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKS-GPLAIPCDEFLFEDILHFLGG 86
D P+G+LAV VGE +RFVI +LN P+ Q LL +A E +G++ G L IPC E LF+ I L
Sbjct: 24 DAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLSA 91
BLAST of rna-XM_004497538.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y2T2|A0A1S2Y2T2_CICAR (Auxin-induced protein 6B-like OS=Cicer arietinum OX=3827 GN=LOC101510919 PE=3 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 7.518e-91 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 Query: 1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSKRSNKYKH 127
MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSKRSNKYKH
Sbjct: 1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSKRSNKYKH 127
BLAST of rna-XM_004497538.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MZE6|A0A2Z6MZE6_TRISU (Auxin-induced protein OS=Trifolium subterraneum OX=3900 GN=TSUD_22900 PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 4.485e-72 Identity = 107/127 (84.25%), Postives = 112/127 (88.19%), Query Frame = 0 Query: 1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSKRSNKYKH 127
M MWRKNAC NGKKLPSDVPRGHLAV VGEANRRFVIRADYLNHPVLQQLLD+A EGYGFNKSGPLAIPCDEFLFEDILH LGGGT T+R SS +L KKL+L FSKD+ PLLE FDSKRSN YKH
Sbjct: 1 MACMWRKNAC--NGKKLPSDVPRGHLAVIVGEANRRFVIRADYLNHPVLQQLLDQACEGYGFNKSGPLAIPCDEFLFEDILHSLGGGTRTRRSSSPVLKKKLDLCFSKDSVPLLEIFDSKRSNNYKH 125
BLAST of rna-XM_004497538.3 vs. UniProtKB/TrEMBL
Match: tr|Q1SN26|Q1SN26_MEDTR (Auxin responsive SAUR protein OS=Medicago truncatula OX=3880 GN=11425044 PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 3.900e-70 Identity = 105/127 (82.68%), Postives = 112/127 (88.19%), Query Frame = 0 Query: 1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSKRSNKYKH 127
M MWRKNACSG KKLPSDVPRGHLAVTVGE NRRFVIRADYLNHPVLQ+LLD+AYEGYGFNKSGPL+IPCDEFLFEDIL LGGGT +R SS +L KKL+LSF KDA PLLEAFDSKRSN YK+
Sbjct: 1 MACMWRKNACSG--KKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGPLSIPCDEFLFEDILLSLGGGTVARRSSSPVLTKKLDLSFLKDAVPLLEAFDSKRSNNYKN 125
BLAST of rna-XM_004497538.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NMU9|A0A2K3NMU9_TRIPR (Auxin-induced protein 6B OS=Trifolium pratense OX=57577 GN=L195_g000757 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 4.217e-69 Identity = 103/127 (81.10%), Postives = 110/127 (86.61%), Query Frame = 0 Query: 1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSKRSNKYKH 127
M MWRKNACSG KKLPSDVPRGHLAV VGEANRRFVIRADYLNHP+LQQLLD+AYEG+GFNKSGPLAIPCDEFLFEDIL LG GT T+R SS +L KKL+L FSKD+ PLLE FD KRSN YKH
Sbjct: 1 MACMWRKNACSG--KKLPSDVPRGHLAVIVGEANRRFVIRADYLNHPLLQQLLDQAYEGHGFNKSGPLAIPCDEFLFEDILQSLGRGTRTRRSSSPVLTKKLDLCFSKDSVPLLEVFDRKRSNNYKH 125
BLAST of rna-XM_004497538.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8M5E4|A0A8B8M5E4_ABRPR (Auxin-responsive protein SAUR50-like OS=Abrus precatorius OX=3816 GN=LOC113870875 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 7.375e-53 Identity = 87/123 (70.73%), Postives = 99/123 (80.49%), Query Frame = 0 Query: 1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEA-YEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSS-HILMKKLELSFSKDAAPLL-EAFDSK 120
M+ MWRKN C G+ KK P+DVPRGHLAVTVGEA RRFVIRADYLNHP+LQQLL++A YEGYGFNKSGPLAIPCDEFLFE+I+ L H +R SS H+ +K L SFSKD+ PLL FDSK
Sbjct: 1 MSCMWRKNGCGGSEKKPPADVPRGHLAVTVGEAKRRFVIRADYLNHPLLQQLLEQASYEGYGFNKSGPLAIPCDEFLFENIIQSLQRQPHARRSSSTHVPLKNLHHSFSKDSLPLLHHGFDSK 123
BLAST of rna-XM_004497538.3 vs. UniProtKB/TrEMBL
Match: tr|A0A151U3A9|A0A151U3A9_CAJCA (Indole-3-acetic acid-induced protein ARG7 OS=Cajanus cajan OX=3821 GN=KK1_006434 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.615e-51 Identity = 81/113 (71.68%), Postives = 91/113 (80.53%), Query Frame = 0 Query: 4 MWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEA 116
MW KNAC G+GKK P+DVPRGHLAV VGEA RRFVIRADYLNHP+LQQLL++AYEG GFNKSGPLAIPCDEFLFEDI+ L GT S+H+ +KKL L SKD PLL+
Sbjct: 1 MWLKNACGGSGKKPPADVPRGHLAVAVGEAKRRFVIRADYLNHPLLQQLLEQAYEGKGFNKSGPLAIPCDEFLFEDIIQTLRDGTS----STHVPLKKLHLPLSKDTLPLLQG 109
BLAST of rna-XM_004497538.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9C6TGZ2|A0A9C6TGZ2_ARADU (Auxin-responsive protein SAUR50-like OS=Arachis duranensis OX=130453 GN=LOC127745018 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.462e-50 Identity = 89/130 (68.46%), Postives = 102/130 (78.46%), Query Frame = 0 Query: 1 MTWMWRKNACSGNG--KKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL-GGGT--HTQRPSS-HILMKKLELSFSKDAAPLLEAFDSKRSNK 124
M MW K ACSG G KKLP+DVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLD+ YEG+GFNKSGPL+IPCDEFLFEDI+ L GGGT ++RPS H+ M K++ PLL +FDSKR ++
Sbjct: 1 MACMWLKQACSGGGCGKKLPADVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDQ-YEGHGFNKSGPLSIPCDEFLFEDIIQSLRGGGTAAESRRPSCPHVPM--------KESTPLLHSFDSKRRSR 121
BLAST of rna-XM_004497538.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445E725|A0A445E725_ARAHY (Auxin-induced protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g005576 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.462e-50 Identity = 89/130 (68.46%), Postives = 102/130 (78.46%), Query Frame = 0 Query: 1 MTWMWRKNACSGNG--KKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL-GGGT--HTQRPSS-HILMKKLELSFSKDAAPLLEAFDSKRSNK 124
M MW K ACSG G KKLP+DVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLD+ YEG+GFNKSGPL+IPCDEFLFEDI+ L GGGT ++RPS H+ M K++ PLL +FDSKR ++
Sbjct: 1 MACMWLKQACSGGGCGKKLPADVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDQ-YEGHGFNKSGPLSIPCDEFLFEDIIQSLRGGGTAAESRRPSCPHVPM--------KESTPLLHSFDSKRRSR 121
BLAST of rna-XM_004497538.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445HG29|A0A445HG29_GLYSO (Auxin-responsive protein SAUR40 OS=Glycine soja OX=3848 GN=D0Y65_036746 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.012e-49 Identity = 86/121 (71.07%), Postives = 97/121 (80.17%), Query Frame = 0 Query: 1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSKR 121
M MW KNA G+GKK P+DVPRGHLAV VGEA RRFVIRADYLNHP+LQQLLD+ YEGYGFNKSGPLAIPCDEFLFEDI+ L GT SSH+ +KKL+ FSKD+ PLL+ +SKR
Sbjct: 1 MACMWLKNASGGSGKKPPTDVPRGHLAVIVGEAKRRFVIRADYLNHPLLQQLLDQLYEGYGFNKSGPLAIPCDEFLFEDIIQTLRDGTS----SSHVPLKKLDFGFSKDSMPLLQGLESKR 117
BLAST of rna-XM_004497538.3 vs. UniProtKB/TrEMBL
Match: tr|I1LZE5|I1LZE5_SOYBN (Auxin-induced protein OS=Glycine max OX=3847 GN=100777611 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 8.344e-49 Identity = 86/121 (71.07%), Postives = 97/121 (80.17%), Query Frame = 0 Query: 1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSKR 121
M MW KNA G+GKK P+DVPRGHLAV VGEA RRFVIRADYLNHP+LQQLLD+ YEGYGFNKSGPLAIPCDEFLFEDI+ L GT SSH+ +KKL+ FSKD+ PLL+ +SKR
Sbjct: 1 MACMWLKNARGGSGKKPPTDVPRGHLAVIVGEAKRRFVIRADYLNHPLLQQLLDQLYEGYGFNKSGPLAIPCDEFLFEDIIQTLRDGTS----SSHVPLKKLDFGFSKDSMPLLQGLESKR 117 The following BLAST results are available for this feature:
BLAST of rna-XM_004497538.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 10 Position : 0 Zoom : x 1
BLAST of rna-XM_004497538.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of rna-XM_004497538.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004497538.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497538.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497538.3; organism=Cicer arietinum; type=mRNA; length=384bpback to top protein sequence of rna-XM_004497538.3_CaCDCfrontier-NCBI_v1 >rna-XM_004497538.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497538.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497538.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=127bpback to top mRNA from alignment at chr4:21947098..21948116+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004497538.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497538.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497538.3; organism=Cicer arietinum; type=mRNA; length=1019bp; location=Sequence derived from: chr4:21947098..21948116+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr4:21947098..21948116+ >rna-XM_004497538.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497538.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497538.3; organism=Cicer arietinum; type=CDS; length=384bp; location=Sequence derived from: chr4:21947098..21948116+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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