Homology
BLAST of Ca_19617 vs. TrEMBL
Match:
B0L632_CICAR (Protease inhibitor/seed storage/LTP family protein (Fragment) OS=Cicer arietinum PE=2 SV=1)
HSP 1 Score: 181.415 bits (459), Expect = 9.042e-44
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
Query: 76 GECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG 333
GECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG
Sbjct: 11 GECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG 96
BLAST of Ca_19617 vs. TrEMBL
Match:
G7L5L2_MEDTR (Protease inhibitor/seed storage/LTP family protein OS=Medicago truncatula GN=MTR_7g065160 PE=4 SV=1)
HSP 1 Score: 172.94 bits (437), Expect = 3.216e-41
Identity = 84/113 (74.34%), Postives = 92/113 (81.42%), Query Frame = 1
Query: 1 METLVKFVCLIXXXXXXXXXXXXXX-GECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCGR 336
ME L+K +C++ GECG+ TTPDNEAFKL PCASAA+DENASVSQSCCAQVKKLGQNPSCLCAVMLSN AKMSGA+PQIAVTIPKRCN+A RPVGYKCGR
Sbjct: 1 MEGLMKLLCIVGIAVLVAGTHRVESAGECGRGTTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGR 113 HSP 2 Score: 103.99 bits (258), Expect = 1.835e-20
Identity = 53/82 (64.63%), Postives = 57/82 (69.51%), Query Frame = 1
Query: 88 KSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG 333
K + NEAFKL PCA QVKKLGQNPSCLCAV+LSN AKMSG +PQIA TIPKRCN+A RPVGYKCG
Sbjct: 168 KKVSGYNEAFKLIPCA----------------QVKKLGQNPSCLCAVLLSNVAKMSGVNPQIASTIPKRCNLADRPVGYKCG 233
BLAST of Ca_19617 vs. TrEMBL
Match:
I3T0E2_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=4 SV=1)
HSP 1 Score: 171.014 bits (432), Expect = 1.222e-40
Identity = 83/112 (74.11%), Postives = 91/112 (81.25%), Query Frame = 1
Query: 1 METLVKFVCLIXXXXXXXXXXXXXX-GECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG 333
ME L+K +C++ GECG+ TTPDNEAFKL PCASAA+DENASVSQSCCAQVKKLGQNPSCLCAVMLSN AKMSGA+PQIAVTIPKRCN+A RPVGYKCG
Sbjct: 1 MEGLMKLLCIVGIAVLVAGTHRVESAGECGRGTTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCG 112
BLAST of Ca_19617 vs. TrEMBL
Match:
I1KK52_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)
HSP 1 Score: 170.629 bits (431), Expect = 1.596e-40
Identity = 77/86 (89.53%), Postives = 84/86 (97.67%), Query Frame = 1
Query: 76 GECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG 333
GECGKSTTPDNEA+KLAPCASAAQDENASVSQSCCAQVKK+GQNPSCLCAV+LSNTAKM+G +PQ+AVTIPKRCN+A RPVGYKCG
Sbjct: 28 GECGKSTTPDNEAYKLAPCASAAQDENASVSQSCCAQVKKIGQNPSCLCAVLLSNTAKMAGVNPQVAVTIPKRCNLANRPVGYKCG 113
BLAST of Ca_19617 vs. TrEMBL
Match:
C6SVZ6_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)
HSP 1 Score: 170.629 bits (431), Expect = 1.596e-40
Identity = 77/86 (89.53%), Postives = 84/86 (97.67%), Query Frame = 1
Query: 76 GECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG 333
GECGKSTTPDNEA+KLAPCASAAQDENASVSQSCCAQVKK+GQNPSCLCAV+LSNTAKM+G +PQ+AVTIPKRCN+A RPVGYKCG
Sbjct: 30 GECGKSTTPDNEAYKLAPCASAAQDENASVSQSCCAQVKKIGQNPSCLCAVLLSNTAKMAGVNPQVAVTIPKRCNLANRPVGYKCG 115
BLAST of Ca_19617 vs. TrEMBL
Match:
G7L5L7_MEDTR (Protease inhibitor/seed storage/LTP family protein OS=Medicago truncatula GN=MTR_7g065210 PE=4 SV=1)
HSP 1 Score: 166.392 bits (420), Expect = 3.010e-39
Identity = 81/112 (72.32%), Postives = 88/112 (78.57%), Query Frame = 1
Query: 1 METLVKFVCLIXXXXXXXXXXXXXX-GECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG 333
ME L+K +CL+ GECG+ TTPD EAFKLAPCASAAQDENASVSQ+CCAQ KKLGQNPSCLCAV+LSN AKMSG +PQIAVTIPKRCN A RPVGYKCG
Sbjct: 1 MEGLMKMLCLVGFVVLVAGIHSVESAGECGRGTTPDMEAFKLAPCASAAQDENASVSQTCCAQTKKLGQNPSCLCAVLLSNVAKMSGVNPQIAVTIPKRCNFANRPVGYKCG 112
BLAST of Ca_19617 vs. TrEMBL
Match:
I3SQ11_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)
HSP 1 Score: 162.925 bits (411), Expect = 3.328e-38
Identity = 77/115 (66.96%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 1 METLVKFVCLIXXXXXXXXXXXXXX----GECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG 333
ME+ +KF+CL+ GECG+ TTPDNEA KLAPCA+AAQDENASVSQSCCAQVKK QNP CLCAV+LSNTAKMSG DP+IA+TIPKRC+ A RP+GYKCG
Sbjct: 1 MESPIKFICLVGFVVLVVSIAGFHRVEGAGECGRYTTPDNEAMKLAPCAAAAQDENASVSQSCCAQVKKFSQNPGCLCAVLLSNTAKMSGIDPKIAITIPKRCSFANRPIGYKCG 115
BLAST of Ca_19617 vs. TrEMBL
Match:
I3SLU7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)
HSP 1 Score: 162.925 bits (411), Expect = 3.328e-38
Identity = 77/115 (66.96%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 1 METLVKFVCLIXXXXXXXXXXXXXX----GECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG 333
ME+ +KF+CL+ GECG+ TTPDNEA KLAPCA+AAQDENASVSQSCCAQVKK QNP CLCAV+LSNTAKMSG DP+IA+TIPKRC+ A RP+GYKCG
Sbjct: 1 MESPIKFICLVGFVVLVVSIAGFHRVEGAGECGRYTTPDNEAMKLAPCATAAQDENASVSQSCCAQVKKFSQNPGCLCAVLLSNTAKMSGIDPKIAITIPKRCSFANRPIGYKCG 115
BLAST of Ca_19617 vs. TrEMBL
Match:
I1JLZ2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)
HSP 1 Score: 159.073 bits (401), Expect = 4.806e-37
Identity = 74/114 (64.91%), Postives = 87/114 (76.32%), Query Frame = 1
Query: 1 METLVKFVC---LIXXXXXXXXXXXXXXGECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG 333
ME K VC L+ GECG+STTPDNEA KL PC SAA+DEN V+++CCAQ++KLG+NPSCLCAVMLSNTAKMSGADP++A+TIPKRCN+A RPVGYKCG
Sbjct: 17 MEAYTKVVCILGLLIFVSISDIHRVEGAGECGRSTTPDNEAIKLIPCVSAAKDENVKVTKNCCAQIEKLGKNPSCLCAVMLSNTAKMSGADPKVAITIPKRCNLANRPVGYKCG 130
BLAST of Ca_19617 vs. TrEMBL
Match:
C6SYQ6_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)
HSP 1 Score: 159.073 bits (401), Expect = 4.806e-37
Identity = 74/114 (64.91%), Postives = 87/114 (76.32%), Query Frame = 1
Query: 1 METLVKFVC---LIXXXXXXXXXXXXXXGECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCG 333
ME K VC L+ GECG+STTPDNEA KL PC SAA+DEN V+++CCAQ++KLG+NPSCLCAVMLSNTAKMSGADP++A+TIPKRCN+A RPVGYKCG
Sbjct: 1 MEAYTKVVCILGLLIFVSISDIHRVEGAGECGRSTTPDNEAIKLIPCVSAAKDENVKVTKNCCAQIEKLGKNPSCLCAVMLSNTAKMSGADPKVAITIPKRCNLANRPVGYKCG 114
The following BLAST results are available for this feature:
BLAST of Ca_19617 vs. TrEMBL
Analysis Date: 2013-10-24 (
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL )
Total hits: 25
50 100 150 200 250 300 Expect = 9.04e-44 / Id = 100.00 Expect = 3.22e-41 / Id = 74.34 Expect = 1.83e-20 / Id = 74.34 Expect = 1.22e-40 / Id = 74.11 Expect = 1.60e-40 / Id = 89.53 Expect = 1.60e-40 / Id = 89.53 Expect = 3.01e-39 / Id = 72.32 Expect = 3.33e-38 / Id = 66.96 Expect = 3.33e-38 / Id = 66.96 Expect = 4.81e-37 / Id = 64.91 Expect = 4.81e-37 / Id = 64.91 Sequence B0L632_CICAR G7L5L2_MEDTR I3T0E2_MEDTR I1KK52_SOYBN C6SVZ6_SOYBN G7L5L7_MEDTR I3SQ11_LOTJA I3SLU7_LOTJA I1JLZ2_SOYBN C6SYQ6_SOYBN
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>Ca_19617_v1.0_kabuli ID=Ca_19617_v1.0_kabuli; Name=Ca_19617; organism=Cicer arietinum; type=mRNA; length=348bp ATGGAGACTCTTGTTAAGTTTGTGTGCCTTATTGCTTTTGTTGTACTTGT TAGTGTTGCAAGTGTGGAAAGTGCTGGTGAATGTGGAAAATCCACTACAC CAGATAATGAAGCTTTTAAGCTAGCTCCTTGTGCAAGTGCAGCACAAGAT GAAAATGCAAGTGTGTCACAAAGTTGTTGTGCTCAGGTTAAGAAACTTGG TCAGAATCCAAGTTGTTTATGTGCTGTTATGCTATCAAACACTGCCAAAA TGTCTGGTGCTGACCCTCAAATTGCTGTGACTATCCCTAAACGTTGCAAC ATTGCTACTCGCCCTGTTGGTTACAAGTGTGGACGTAAGTATAATTAA back to top protein sequence of Ca_19617_v1.0_kabuli
>Ca_19617_v1.0_kabuli ID=Ca_19617_v1.0_kabuli; Name=Ca_19617_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=115bp METLVKFVCLIAFVVLVSVASVESAGECGKSTTPDNEAFKLAPCASAAQD ENASVSQSCCAQVKKLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCN IATRPVGYKCGRKYN back to top mRNA from alignment at Ca3:18331358..18331705-
Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_19617_v1.0_kabuli ID=Ca_19617_v1.0_kabuli; Name=Ca_19617; organism=Cicer arietinum; type=mRNA; length=348bp; location=Sequence derived from: Ca3:18331358..18331705- (Cicer arietinumATGGAGACTCTTGTTAAGTTTGTGTGCCTTATTGCTTTTGTTGTACTTGT
TAGTGTTGCAAGTGTGGAAAGTGCTGGTGAATGTGGAAAATCCACTACAC
CAGATAATGAAGCTTTTAAGCTAGCTCCTTGTGCAAGTGCAGCACAAGAT
GAAAATGCAAGTGTGTCACAAAGTTGTTGTGCTCAGGTTAAGAAACTTGG
TCAGAATCCAAGTTGTTTATGTGCTGTTATGCTATCAAACACTGCCAAAA
TGTCTGGTGCTGACCCTCAAATTGCTGTGACTATCCCTAAACGTTGCAAC
ATTGCTACTCGCCCTGTTGGTTACAAGTGTGGACGTAAGTATAATTAA back to top Coding sequence (CDS) from alignment at Ca3:18331358..18331705-
>Ca_19617_v1.0_kabuli ID=Ca_19617_v1.0_kabuli; Name=Ca_19617; organism=Cicer arietinum; type=CDS; length=348bp; location=Sequence derived from: Ca3:18331358..18331705- (Cicer arietinum ATGGAGACTCTTGTTAAGTTTGTGTGCCTTATTGCTTTTGTTGTACTTGT TAGTGTTGCAAGTGTGGAAAGTGCTGGTGAATGTGGAAAATCCACTACAC CAGATAATGAAGCTTTTAAGCTAGCTCCTTGTGCAAGTGCAGCACAAGAT GAAAATGCAAGTGTGTCACAAAGTTGTTGTGCTCAGGTTAAGAAACTTGG TCAGAATCCAAGTTGTTTATGTGCTGTTATGCTATCAAACACTGCCAAAA TGTCTGGTGCTGACCCTCAAATTGCTGTGACTATCCCTAAACGTTGCAAC ATTGCTACTCGCCCTGTTGGTTACAAGTGTGGACGTAAGTATAATTAA back to top