Ca_08235, Ca_08235_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_08235
Unique NameCa_08235_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length369
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca3chromosomeCa3:26725442..26726832 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR176Pisum sativum Cameor genome v1aPisum sativum
capsR197Pisum sativum Cameor genome v1aPisum sativum
cavuR163Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR184Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR206Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0328Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0086Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0474Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0678Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1111Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL461Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR159Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR172Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR183Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR190Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR221Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR180Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR188Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR222Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR171Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR203Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR249Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR154Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR175Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR080Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR081Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL016Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL439Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR182Cicer arietinum
cacarR183Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004493111.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_08235-CDS1Ca_08235-CDS1Cicer arietinumCDS
Ca_08235-CDS2Ca_08235-CDS2Cicer arietinumCDS
Ca_08235-CDS3Ca_08235-CDS3Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_08235_v1.0_kabuliCa_08235_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_08235 vs. SwissProt
Match: RS202_ARATH (40S ribosomal protein S20-2 OS=Arabidopsis thaliana GN=RPS20B PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 2.766e-56
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 1 
Query:    1 MAYAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            MAY  +KPTK GLE   EQIHKIRITLSSK+V+NLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIAD+
Sbjct:    1 MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 122
[Close]
BLAST of Ca_08235 vs. SwissProt
Match: RS201_ARATH (40S ribosomal protein S20-1 OS=Arabidopsis thaliana GN=RPS20A PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 2.342e-55
Identity = 106/121 (87.60%), Postives = 113/121 (93.39%), Query Frame = 1 
Query:    4 AYAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            AY  +KP K GLE+  EQIHKIRITLSSK+V+NLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIAD+
Sbjct:    4 AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 124
[Close]
BLAST of Ca_08235 vs. SwissProt
Match: RS20_ORYSJ (40S ribosomal protein S20 OS=Oryza sativa subsp. japonica GN=RPS20 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 5.586e-49
Identity = 99/122 (81.15%), Postives = 108/122 (88.52%), Query Frame = 1 
Query:    1 MAYAA-VKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIAD 363
            +AYA  +K  K G E SQE  H+IRITLSSK V+NLEKVC DLV+GAKDK L+VKGPVRMPTKVL+ITTRKSPCGEGTNTWDRFE+RVHKRVIDL SS DVVKQITSITIEPGVEVEVTI+D
Sbjct:    6 VAYAPPMKSGKIGFESSQEVQHRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTISD 127
[Close]
BLAST of Ca_08235 vs. SwissProt
Match: RS20_XENLA (40S ribosomal protein S20 OS=Xenopus laevis GN=rps20 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.020e-42
Identity = 79/108 (73.15%), Postives = 99/108 (91.67%), Query Frame = 1 
Query:   43 DSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            D +  IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:   12 DQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. SwissProt
Match: RS20_RAT (40S ribosomal protein S20 OS=Rattus norvegicus GN=Rps20 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.273e-42
Identity = 81/118 (68.64%), Postives = 102/118 (86.44%), Query Frame = 1 
Query:   13 AVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            A K T     + +  IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:    2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. SwissProt
Match: RS20_MOUSE (40S ribosomal protein S20 OS=Mus musculus GN=Rps20 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.273e-42
Identity = 81/118 (68.64%), Postives = 102/118 (86.44%), Query Frame = 1 
Query:   13 AVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            A K T     + +  IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:    2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. SwissProt
Match: RS20_MACFA (40S ribosomal protein S20 OS=Macaca fascicularis GN=RPS20 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.273e-42
Identity = 81/118 (68.64%), Postives = 102/118 (86.44%), Query Frame = 1 
Query:   13 AVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            A K T     + +  IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:    2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. SwissProt
Match: RS20_HUMAN (40S ribosomal protein S20 OS=Homo sapiens GN=RPS20 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.273e-42
Identity = 81/118 (68.64%), Postives = 102/118 (86.44%), Query Frame = 1 
Query:   13 AVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            A K T     + +  IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:    2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. SwissProt
Match: RS20_BOVIN (40S ribosomal protein S20 OS=Bos taurus GN=RPS20 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.273e-42
Identity = 81/118 (68.64%), Postives = 102/118 (86.44%), Query Frame = 1 
Query:   13 AVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            A K T     + +  IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:    2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. SwissProt
Match: RS20_PONAB (40S ribosomal protein S20 OS=Pongo abelii GN=RPS20 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.474e-41
Identity = 80/118 (67.80%), Postives = 101/118 (85.59%), Query Frame = 1 
Query:   13 AVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            A K T     + +  IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITT K+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:    2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTGKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. TrEMBL
Match: I3T0A3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 3.106e-60
Identity = 116/122 (95.08%), Postives = 121/122 (99.18%), Query Frame = 1 
Query:    1 MAYAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            MAYAA+KPTKPGLE+S EQIHKIRITLSSKHVQNLEKVC+DL+RGAKDKRLRVKGPVR+PTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA
Sbjct:    1 MAYAAMKPTKPGLEESGEQIHKIRITLSSKHVQNLEKVCSDLIRGAKDKRLRVKGPVRIPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 122
[Close]
BLAST of Ca_08235 vs. TrEMBL
Match: I1M7C7_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 4.056e-60
Identity = 117/122 (95.90%), Postives = 121/122 (99.18%), Query Frame = 1 
Query:    1 MAYAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            MAYAA+KPTKPGLE+SQEQIHKIRITLSSK+V+NLEKVCADLVRGAKDK LRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA
Sbjct:    1 MAYAAMKPTKPGLEESQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 122
[Close]
BLAST of Ca_08235 vs. TrEMBL
Match: G7JPA9_MEDTR (40S ribosomal protein S20-2 OS=Medicago truncatula GN=MTR_4g034030 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 4.056e-60
Identity = 116/122 (95.08%), Postives = 121/122 (99.18%), Query Frame = 1 
Query:    1 MAYAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            MAYAA+KPTKPGLE+SQEQIHKIRITLSSKHVQNLEKVC+DLVRGAKDK LRVKGPVRMPTKVL+ITTRK+PCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA
Sbjct:    1 MAYAAMKPTKPGLEESQEQIHKIRITLSSKHVQNLEKVCSDLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 122
[Close]
BLAST of Ca_08235 vs. TrEMBL
Match: A2Q4V6_MEDTR (40S ribosomal protein S20-2 OS=Medicago truncatula GN=MTR_7g092720 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 5.298e-60
Identity = 116/122 (95.08%), Postives = 121/122 (99.18%), Query Frame = 1 
Query:    1 MAYAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            MAYAA+KPTKPGLE+SQEQIHKIRITLSSKHV+NLEKVCADLVRGAKDK LRVKGPVRMPTKVL+ITTRK+PCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA
Sbjct:    1 MAYAAMKPTKPGLEESQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 122
[Close]
BLAST of Ca_08235 vs. TrEMBL
Match: I1N954_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 3.434e-59
Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = 1 
Query:    7 YAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            YAA+KPTKPGLE+SQEQIHKIRITLSSKHV+NLEKVCADLVRGA DKRLRVKGPVRMPTKVL+ITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA
Sbjct:    4 YAAMKPTKPGLEESQEQIHKIRITLSSKHVKNLEKVCADLVRGATDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 123
[Close]
BLAST of Ca_08235 vs. TrEMBL
Match: I1LFQ4_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 4.485e-59
Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 1 
Query:    1 MAYAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            MAYAA+KPTK GLE+ QEQIHKIRITLSSK+V+NLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKR+IDLYSSPDVVKQITSITIEPGVEVEVTIADA
Sbjct:    1 MAYAAMKPTKAGLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRIIDLYSSPDVVKQITSITIEPGVEVEVTIADA 122
[Close]
BLAST of Ca_08235 vs. TrEMBL
Match: C6SZK0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 4.485e-59
Identity = 114/120 (95.00%), Postives = 119/120 (99.17%), Query Frame = 1 
Query:    7 YAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            YAA+KPTKPGLE+SQEQ+HKIRITLSSKHV+NLEKVCADLVRGA DKRLRVKGPVRMPTKVL+ITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA
Sbjct:    4 YAAMKPTKPGLEESQEQVHKIRITLSSKHVKNLEKVCADLVRGATDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 123
[Close]
BLAST of Ca_08235 vs. TrEMBL
Match: M0ZK92_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000965 PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 7.650e-59
Identity = 113/122 (92.62%), Postives = 121/122 (99.18%), Query Frame = 1 
Query:    1 MAYAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            MAYAA+KPTKPGLE+ QEQ+HKIRITLSSK+V+NLEKVCADLVRGAKDKRL+VKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIAD+
Sbjct:    1 MAYAAMKPTKPGLEEPQEQVHKIRITLSSKNVKNLEKVCADLVRGAKDKRLKVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 122
[Close]
BLAST of Ca_08235 vs. TrEMBL
Match: C6T0U3_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 7.650e-59
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 1 
Query:    7 YAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            YAA+KP KPGLE+SQEQIHKIRITLSSKHV+NLEKVC DLVRGAKDKRLRVKGPVRMPTKVL+ITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA
Sbjct:    4 YAAMKPNKPGLEESQEQIHKIRITLSSKHVKNLEKVCGDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 123
[Close]
BLAST of Ca_08235 vs. TrEMBL
Match: C6SY25_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 7.650e-59
Identity = 115/120 (95.83%), Postives = 118/120 (98.33%), Query Frame = 1 
Query:    7 YAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            YAA+KPTKPGLE+ QEQIHKIRITLSSKHV+NLEKVCADLVRGAKDKRLRVKGPVRMPTKVL ITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA
Sbjct:    4 YAAMKPTKPGLEEPQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLLITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 123
[Close]
BLAST of Ca_08235 vs. DB:Swiss
Match: RS202_ARATH (40S ribosomal protein S20-2 OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.603e-75
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 1 
Query:    1 MAYAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            MAY  +KPTK GLE   EQIHKIRITLSSK+V+NLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIAD+
Sbjct:    1 MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 122
[Close]
BLAST of Ca_08235 vs. DB:Swiss
Match: RS201_ARATH (40S ribosomal protein S20-1 OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 1.172e-73
Identity = 106/121 (87.60%), Postives = 113/121 (93.39%), Query Frame = 1 
Query:    4 AYAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            AY  +KP K GLE+  EQIHKIRITLSSK+V+NLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIAD+
Sbjct:    4 AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 124
[Close]
BLAST of Ca_08235 vs. DB:Swiss
Match: RS20_ORYSJ (40S ribosomal protein S20 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS20 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 1.978e-65
Identity = 99/122 (81.15%), Postives = 108/122 (88.52%), Query Frame = 1 
Query:    1 MAYAA-VKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIAD 363
            +AYA  +K  K G E SQE  H+IRITLSSK V+NLEKVC DLV+GAKDK L+VKGPVRMPTKVL+ITTRKSPCGEGTNTWDRFE+RVHKRVIDL SS DVVKQITSITIEPGVEVEVTI+D
Sbjct:    6 VAYAPPMKSGKIGFESSQEVQHRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTISD 127
[Close]
BLAST of Ca_08235 vs. DB:Swiss
Match: RS20_XENLA (40S ribosomal protein S20 OS=Xenopus laevis OX=8355 GN=rps20 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 3.770e-56
Identity = 79/108 (73.15%), Postives = 99/108 (91.67%), Query Frame = 1 
Query:   43 DSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            D +  IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:   12 DQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. DB:Swiss
Match: RS20_RAT (40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.534e-55
Identity = 78/103 (75.73%), Postives = 97/103 (94.17%), Query Frame = 1 
Query:   58 IHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:   17 IHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. DB:Swiss
Match: RS20_MOUSE (40S ribosomal protein S20 OS=Mus musculus OX=10090 GN=Rps20 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.534e-55
Identity = 78/103 (75.73%), Postives = 97/103 (94.17%), Query Frame = 1 
Query:   58 IHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:   17 IHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. DB:Swiss
Match: RS20_MACFA (40S ribosomal protein S20 OS=Macaca fascicularis OX=9541 GN=RPS20 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.534e-55
Identity = 78/103 (75.73%), Postives = 97/103 (94.17%), Query Frame = 1 
Query:   58 IHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:   17 IHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. DB:Swiss
Match: RS20_HUMAN (40S ribosomal protein S20 OS=Homo sapiens OX=9606 GN=RPS20 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.534e-55
Identity = 78/103 (75.73%), Postives = 97/103 (94.17%), Query Frame = 1 
Query:   58 IHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:   17 IHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. DB:Swiss
Match: RS20_BOVIN (40S ribosomal protein S20 OS=Bos taurus OX=9913 GN=RPS20 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.534e-55
Identity = 78/103 (75.73%), Postives = 97/103 (94.17%), Query Frame = 1 
Query:   58 IHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:   17 IHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
[Close]
BLAST of Ca_08235 vs. DB:Swiss
Match: RS20_PONAB (40S ribosomal protein S20 OS=Pongo abelii OX=9601 GN=RPS20 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.429e-54
Identity = 77/103 (74.76%), Postives = 96/103 (93.20%), Query Frame = 1 
Query:   58 IHKIRITLSSKHVQNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 366
            IH+IRITL+S++V++LEKVCADL+RGAK+K L+VKGPVRMPTK L ITT K+PCGEG+ TWDRF++R+HKR+IDL+S  ++VKQITSI+IEPGVEVEVTIADA
Sbjct:   17 IHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTGKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
The following BLAST results are available for this feature:
BLAST of Ca_08235 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
RS202_ARATH2.766e-5688.5240S ribosomal protein S20-2 OS=Arabidopsis thalian... [more]
RS201_ARATH2.342e-5587.6040S ribosomal protein S20-1 OS=Arabidopsis thalian... [more]
RS20_ORYSJ5.586e-4981.1540S ribosomal protein S20 OS=Oryza sativa subsp. j... [more]
RS20_XENLA1.020e-4273.1540S ribosomal protein S20 OS=Xenopus laevis GN=rps... [more]
RS20_RAT2.273e-4268.6440S ribosomal protein S20 OS=Rattus norvegicus GN=... [more]
RS20_MOUSE2.273e-4268.6440S ribosomal protein S20 OS=Mus musculus GN=Rps20... [more]
RS20_MACFA2.273e-4268.6440S ribosomal protein S20 OS=Macaca fascicularis G... [more]
RS20_HUMAN2.273e-4268.6440S ribosomal protein S20 OS=Homo sapiens GN=RPS20... [more]
RS20_BOVIN2.273e-4268.6440S ribosomal protein S20 OS=Bos taurus GN=RPS20 P... [more]
RS20_PONAB1.474e-4167.8040S ribosomal protein S20 OS=Pongo abelii GN=RPS20... [more]

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BLAST of Ca_08235 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
I3T0A3_LOTJA3.106e-6095.08Uncharacterized protein OS=Lotus japonicus PE=2 SV... [more]
I1M7C7_SOYBN4.056e-6095.90Uncharacterized protein OS=Glycine max PE=3 SV=1[more]
G7JPA9_MEDTR4.056e-6095.0840S ribosomal protein S20-2 OS=Medicago truncatula... [more]
A2Q4V6_MEDTR5.298e-6095.0840S ribosomal protein S20-2 OS=Medicago truncatula... [more]
I1N954_SOYBN3.434e-5995.83Uncharacterized protein OS=Glycine max PE=3 SV=1[more]
I1LFQ4_SOYBN4.485e-5994.26Uncharacterized protein OS=Glycine max PE=3 SV=1[more]
C6SZK0_SOYBN4.485e-5995.00Putative uncharacterized protein OS=Glycine max PE... [more]
M0ZK92_SOLTU7.650e-5992.62Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
C6T0U3_SOYBN7.650e-5995.00Uncharacterized protein OS=Glycine max PE=2 SV=1[more]
C6SY25_SOYBN7.650e-5995.83Uncharacterized protein OS=Glycine max PE=2 SV=1[more]

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BLAST of Ca_08235 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RS202_ARATH4.603e-7588.5240S ribosomal protein S20-2 OS=Arabidopsis thalian... [more]
RS201_ARATH1.172e-7387.6040S ribosomal protein S20-1 OS=Arabidopsis thalian... [more]
RS20_ORYSJ1.978e-6581.1540S ribosomal protein S20 OS=Oryza sativa subsp. j... [more]
RS20_XENLA3.770e-5673.1540S ribosomal protein S20 OS=Xenopus laevis OX=835... [more]
RS20_RAT1.534e-5575.7340S ribosomal protein S20 OS=Rattus norvegicus OX=... [more]
RS20_MOUSE1.534e-5575.7340S ribosomal protein S20 OS=Mus musculus OX=10090... [more]
RS20_MACFA1.534e-5575.7340S ribosomal protein S20 OS=Macaca fascicularis O... [more]
RS20_HUMAN1.534e-5575.7340S ribosomal protein S20 OS=Homo sapiens OX=9606 ... [more]
RS20_BOVIN1.534e-5575.7340S ribosomal protein S20 OS=Bos taurus OX=9913 GN... [more]
RS20_PONAB2.429e-5474.7640S ribosomal protein S20 OS=Pongo abelii OX=9601 ... [more]
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Expression

Available Analyses

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Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001848Ribosomal protein S10PRINTSPR00971RIBOSOMALS10coord: 22..35
score: 4e-13coord: 57..72
score: 4e-13coord: 79..93
score: 4
IPR001848Ribosomal protein S10GENE3D3.30.70.600no descriptioncoord: 22..117
score: 7.1
IPR001848Ribosomal protein S10PANTHERPTHR11700FAMILY NOT NAMEDcoord: 1..122
score: 3.8
IPR001848Ribosomal protein S10PFAMPF00338Ribosomal_S10coord: 23..119
score: 2.9
IPR001848Ribosomal protein S10SUPERFAMILY54999Ribosomal protein S10coord: 22..119
score: 1.3
IPR005729Ribosomal protein S10, eukaryotic/archaealTIGRFAMsTIGR01046S10_Arc_S20_Euk: ribosomal protein S10coord: 21..119
score: 1.6
IPR018268Ribosomal protein S10, conserved sitePROSITEPS00361RIBOSOMAL_S10coord: 46..61
score
NoneNo IPR availablePANTHERPTHR11700:SF340S RIBOSOMAL PROTEIN S20coord: 1..122
score: 3.8
NoneNo IPR availableSEGsegsegcoord: 32..52
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_08235_v1.0_kabuli ID=Ca_08235_v1.0_kabuli; Name=Ca_08235; organism=Cicer arietinum; type=mRNA; length=369bp
ATGGCGTACGCTGCTGTGAAACCCACCAAGCCTGGTTTGGAGGATTCTCA
AGAGCAGATCCACAAGATTAGGATCACTCTTTCCTCTAAACACGTCCAAA
ATCTTGAAAAGGTTTGTGCTGACTTGGTTCGTGGTGCGAAGGATAAGCGT
CTTAGGGTTAAGGGACCTGTTAGGATGCCCACTAAAGTTCTAAACATCAC
TACTAGAAAGTCCCCTTGCGGTGAAGGTACTAACACCTGGGATCGATTTG
AACTCCGTGTGCACAAGAGAGTCATTGACCTCTACAGTTCCCCTGATGTT
GTTAAACAGATTACCTCTATCACCATTGAACCTGGTGTTGAGGTTGAGGT
GACCATTGCAGATGCTTGA
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protein sequence of Ca_08235_v1.0_kabuli

>Ca_08235_v1.0_kabuli ID=Ca_08235_v1.0_kabuli; Name=Ca_08235_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=122bp
MAYAAVKPTKPGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKR
LRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDV
VKQITSITIEPGVEVEVTIADA
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mRNA from alignment at Ca3:26725442..26726832-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_08235_v1.0_kabuli ID=Ca_08235_v1.0_kabuli; Name=Ca_08235; organism=Cicer arietinum; type=mRNA; length=1391bp; location=Sequence derived from: Ca3:26725442..26726832- (Cicer arietinum
ATGGCGTACGCTGCTGTGAAACCCACCAAGCCTGGTTTGGAGGATTCTCA
AGAGCAGATCCACAAGATTAGGATCACTCTTTCCTCTAAACACGTCCAAA
ATCTTGAAAAGGGTATTTTCTCATCTTCCCGTTAATCTTTCCTTCCTTAT
TATTTTTTGTATTTCTATCGCTACTAAGATCACTTTTAAATTTTTGTTGG
TAGTTTGTGCTGACTTGGTTCGTGGTGCGAAGGATAAGCGTCTTAGGGTT
AAGGGACCTGTTAGGATGCCCACTAAAGTTCTAAACATCACTACTAGAAA
GTCCCCTTGCGGTGAAGGTATTCCATTTTATTTTTTTTCATTCTCTTTTA
TAACTTTTATTGTTTTTTTGGTTAATTTCATTATTAGACATTTCATTATG
ATTTTAGTATATGATTGAAGGTACTTAACATTGGTAAATAGATGTCAAAC
AACACAGGGAGGGAGATATGATATAGTTTATTTAGAGAGTATTTTGATTA
TTTTATAAAATAAGAATTTGTAGTTGTGTATCCACTAACTGTTGGAGATT
AATTCTTTTAGTTTCTAAATTGCCTTATATTTGAGTTCTATATAAGCACT
TAATATAGTTGTATATCCTAATGATCCCTGAAACTACTCTATGCAAAAAT
AATAAAATTGAAACTTCTTTCTGGTTGTGTTTTTTGAAAGCCCCTTGAAT
TTACTTTTTCTGTCTCTTTGGTTTGTTCTGTTTTGTTGGTTTTGTCTTTG
CTCAATGAGAATGTTTTTTCAATATCATGTTGTGTTCTACTTCTATGTTA
TGGATGTCTATTATCCTGAATTTTATGAGAATAAAAAGATTGTATCTGTT
GCCAAAAGTAGTTTTTAAATAGCAAATTGTCTAAATCTTTTTACATCAGA
TTTATATAATTATGTAGCTATTTATGTCATGGTTGGTTCTCTACTACTGG
CATGATTTGCAAGGTTATCTCTTTTGACTTTTATTATTATGACATTTTGT
ATGCATGTGTATTTATGTTGGCCCAAACTGCAGTGCAAAATGTCTGAAAA
GTGTTTTGGTTTTTGGTTGGAAGTGTTATTTGCTCTATATCACCTGAATT
ATGTGCTCTGCTAATTTGTCTTATGAAACTGTAATAGTGTTGTGTAGTTT
TGACATGTAGTGGTTATTGGTTAATGTGTGCATTCTCTGAACTTTGTTTG
AATGAATAATAATCTGCATTGTGGTCATGATGCTACTTGTTGTTTCAGGT
ACTAACACCTGGGATCGATTTGAACTCCGTGTGCACAAGAGAGTCATTGA
CCTCTACAGTTCCCCTGATGTTGTTAAACAGATTACCTCTATCACCATTG
AACCTGGTGTTGAGGTTGAGGTGACCATTGCAGATGCTTGA
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Coding sequence (CDS) from alignment at Ca3:26725442..26726832-

>Ca_08235_v1.0_kabuli ID=Ca_08235_v1.0_kabuli; Name=Ca_08235; organism=Cicer arietinum; type=CDS; length=369bp; location=Sequence derived from: Ca3:26725442..26726832- (Cicer arietinum
ATGGCGTACGCTGCTGTGAAACCCACCAAGCCTGGTTTGGAGGATTCTCA
AGAGCAGATCCACAAGATTAGGATCACTCTTTCCTCTAAACACGTCCAAA
ATCTTGAAAAGGTTTGTGCTGACTTGGTTCGTGGTGCGAAGGATAAGCGT
CTTAGGGTTAAGGGACCTGTTAGGATGCCCACTAAAGTTCTAAACATCAC
TACTAGAAAGTCCCCTTGCGGTGAAGGTACTAACACCTGGGATCGATTTG
AACTCCGTGTGCACAAGAGAGTCATTGACCTCTACAGTTCCCCTGATGTT
GTTAAACAGATTACCTCTATCACCATTGAACCTGGTGTTGAGGTTGAGGT
GACCATTGCAGATGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K02969RP-S20e, RPS20; small subunit ribosomal protein S20e
Vocabulary: KEGG PATHWAY
TermDefinition
ko03010Ribosome
Vocabulary: INTERPRO
TermDefinition
IPR001848Ribosomal_uS10
IPR005729Ribosomal_uS10_euk/arc
IPR018268Ribosomal_S10_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation