Ca_03663, Ca_03663_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03663 vs. SwissProt
Match: SRSF1_ARATH (Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana GN=SF2 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 9.713e-62 Identity = 120/194 (61.86%), Postives = 136/194 (70.10%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSV--------XXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MS RSSRT+YVGNLPGDIR REVEDLF KYGP+V IDLK+PP+PPGYAFVEF+DARDA+DAI LRVELAHGGRR+S LVTGLP SASWQDLKDHMRK GDVCFSQV+R+ G TG+VDYT Y+D+KYA++KLDD+EFRNAFS Y+RVRE
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVRE 194
BLAST of Ca_03663 vs. SwissProt
Match: SRS1B_DANRE (Serine/arginine-rich splicing factor 1B OS=Danio rerio GN=srsf1b PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.146e-36 Identity = 85/186 (45.70%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNS-SSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR ++VED+FYKYG I DIDLK P +AFVEFED RDA+DA+ LRVE GR +V+GLPPS SWQDLKDHMR+AGDVC++ VFR+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 10 AGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192
BLAST of Ca_03663 vs. SwissProt
Match: SRSF1_CHICK (Serine/arginine-rich splicing factor 1 OS=Gallus gallus GN=SRSF1 PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 4.109e-36 Identity = 84/186 (45.16%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGR-RNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR +++ED+FYKYG I DIDLK P +AFVEFED RDA+DA+ LRVE GR +V+GLPPS SWQDLKDHMR+AGDVC++ VFR+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 11 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
BLAST of Ca_03663 vs. SwissProt
Match: SRSF1_PONAB (Serine/arginine-rich splicing factor 1 OS=Pongo abelii GN=SRSF1 PE=2 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.196e-35 Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGR-RNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR +++ED+FYKYG I DIDLK P +AFVEFED RDA+DA+ LRVE GR +V+GLPPS SWQDLKDHMR+AGDVC++ V+R+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 11 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
BLAST of Ca_03663 vs. SwissProt
Match: SRSF1_PIG (Serine/arginine-rich splicing factor 1 OS=Sus scrofa GN=SRSF1 PE=2 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.196e-35 Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGR-RNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR +++ED+FYKYG I DIDLK P +AFVEFED RDA+DA+ LRVE GR +V+GLPPS SWQDLKDHMR+AGDVC++ V+R+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 11 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
BLAST of Ca_03663 vs. SwissProt
Match: SRSF1_MOUSE (Serine/arginine-rich splicing factor 1 OS=Mus musculus GN=Srsf1 PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.196e-35 Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGR-RNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR +++ED+FYKYG I DIDLK P +AFVEFED RDA+DA+ LRVE GR +V+GLPPS SWQDLKDHMR+AGDVC++ V+R+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 11 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
BLAST of Ca_03663 vs. SwissProt
Match: SRSF1_HUMAN (Serine/arginine-rich splicing factor 1 OS=Homo sapiens GN=SRSF1 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.196e-35 Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGR-RNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR +++ED+FYKYG I DIDLK P +AFVEFED RDA+DA+ LRVE GR +V+GLPPS SWQDLKDHMR+AGDVC++ V+R+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 11 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
BLAST of Ca_03663 vs. SwissProt
Match: SRSF1_BOVIN (Serine/arginine-rich splicing factor 1 OS=Bos taurus GN=SRSF1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.196e-35 Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGR-RNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR +++ED+FYKYG I DIDLK P +AFVEFED RDA+DA+ LRVE GR +V+GLPPS SWQDLKDHMR+AGDVC++ V+R+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 11 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
BLAST of Ca_03663 vs. SwissProt
Match: RSP3_CAEEL (Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans GN=rsp-3 PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.562e-35 Identity = 87/196 (44.39%), Postives = 112/196 (57.14%), Query Frame = 1 Query: 7 GRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHG-GRRNSSSVXXXXXXXXXXXXXXXXXXXXXXX----------LVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVRE 558
G + +YVGNLPGD+R +EVED+F+KYG I +D+K + P +AFVEFED RDA+DA+ +RVE G G R +V GLPP+ SWQDLKDHMR AGDVC++ V R+ TG+V++T Y+DVKYAVRKLDD++FR + AYIRVRE
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARDG---TGVVEFTRYEDVKYAVRKLDDTKFRSHEGETAYIRVRE 196
BLAST of Ca_03663 vs. SwissProt
Match: SRS1A_DANRE (Serine/arginine-rich splicing factor 1A OS=Danio rerio GN=srsf1a PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 5.934e-35 Identity = 85/196 (43.37%), Postives = 110/196 (56.12%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRR-----------NSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR ++VED+FYKYG I DIDLK P +AFVEFED RDA+DA+ LRVE GR +V+GLPPS SWQDLKDHMR+AGDVC++ VFR+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 10 AGSNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 202
BLAST of Ca_03663 vs. TrEMBL
Match: I3SZD8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 9.401e-74 Identity = 144/186 (77.42%), Postives = 148/186 (79.57%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MSGRSSRTLYVGNLPGDIR+REVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAI L VELAHGGR +SSSV LVTGLPPSASWQDLKDHMRKAG VCFSQVFRERGGLTGIVDYTNYDDVKYA+RKLDDSEFRNAFSR+YIRVRE
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVRE 186
BLAST of Ca_03663 vs. TrEMBL
Match: G7I8Q6_MEDTR (Pre-mRNA-splicing factor SF2 OS=Medicago truncatula GN=MTR_1g083400 PE=4 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 9.401e-74 Identity = 144/186 (77.42%), Postives = 148/186 (79.57%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MSGRSSRTLYVGNLPGDIR+REVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAI L VELAHGGR +SSSV LVTGLPPSASWQDLKDHMRKAG VCFSQVFRERGGLTGIVDYTNYDDVKYA+RKLDDSEFRNAFSR+YIRVRE
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVRE 217
BLAST of Ca_03663 vs. TrEMBL
Match: G7I8Q5_MEDTR (Pre-mRNA-splicing factor SF2 OS=Medicago truncatula GN=MTR_1g083400 PE=4 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 9.401e-74 Identity = 144/186 (77.42%), Postives = 148/186 (79.57%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MSGRSSRTLYVGNLPGDIR+REVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAI L VELAHGGR +SSSV LVTGLPPSASWQDLKDHMRKAG VCFSQVFRERGGLTGIVDYTNYDDVKYA+RKLDDSEFRNAFSR+YIRVRE
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVRE 217
BLAST of Ca_03663 vs. TrEMBL
Match: G7I8Q4_MEDTR (Pre-mRNA-splicing factor SF2 OS=Medicago truncatula GN=MTR_1g083400 PE=4 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 9.401e-74 Identity = 144/186 (77.42%), Postives = 148/186 (79.57%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MSGRSSRTLYVGNLPGDIR+REVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAI L VELAHGGR +SSSV LVTGLPPSASWQDLKDHMRKAG VCFSQVFRERGGLTGIVDYTNYDDVKYA+RKLDDSEFRNAFSR+YIRVRE
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVRE 217
BLAST of Ca_03663 vs. TrEMBL
Match: G7I8Q3_MEDTR (Pre-mRNA-splicing factor SF2 OS=Medicago truncatula GN=MTR_1g083400 PE=4 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 9.401e-74 Identity = 144/186 (77.42%), Postives = 148/186 (79.57%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MSGRSSRTLYVGNLPGDIR+REVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAI L VELAHGGR +SSSV LVTGLPPSASWQDLKDHMRKAG VCFSQVFRERGGLTGIVDYTNYDDVKYA+RKLDDSEFRNAFSR+YIRVRE
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVRE 217
BLAST of Ca_03663 vs. TrEMBL
Match: B7FKD2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 9.401e-74 Identity = 144/186 (77.42%), Postives = 148/186 (79.57%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MSGRSSRTLYVGNLPGDIR+REVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAI L VELAHGGR +SSSV LVTGLPPSASWQDLKDHMRKAG VCFSQVFRERGGLTGIVDYTNYDDVKYA+RKLDDSEFRNAFSR+YIRVRE
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVRE 186
BLAST of Ca_03663 vs. TrEMBL
Match: I1NJ19_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 2.735e-73 Identity = 140/186 (75.27%), Postives = 149/186 (80.11%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MSGRSSRT+YVGNLPGD+R+REVEDLFYKYGPIVDIDLKIPP+PPGYAFVEFEDARDA+DAI LRVELAHGGR SSSV LVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGG+TGIVDYTNYDD+KYA+RKLDDSEFRNAFSRA+IRVRE
Sbjct: 1 MSGRSSRTIYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIQYRDGYNFDGFRLRVELAHGGRGYSSSVDRYSSYSGGSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAFIRVRE 186
BLAST of Ca_03663 vs. TrEMBL
Match: B9I7H7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_773626 PE=4 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 3.697e-70 Identity = 134/183 (73.22%), Postives = 146/183 (79.78%), Query Frame = 1 Query: 10 RSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
R+SRTLYVGNLPGDIR+REVEDLFYKYGPIVDIDLKIPP+PPGYAFVEFE+ARDA+DAI LRVELAHGGRR+SS V LVTGLP SASWQDLKDHMR+AGDVCFSQVFR+RGG+TGIVDYTNYDD+KYA++KLDDSEFRNAFSRAYIRVRE
Sbjct: 3 RASRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYNFDGCRLRVELAHGGRRHSSPVDHYSSYSGSSGSRGPSKRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVRE 185
BLAST of Ca_03663 vs. TrEMBL
Match: M5W0G3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009360mg PE=4 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 8.236e-70 Identity = 131/186 (70.43%), Postives = 147/186 (79.03%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MS RSSRT+YVGNLPGDIRMRE+EDLF KYGPIVDIDLK+PP+PPGYAF+EFEDARDA DAI LRVELAHGGR +SSS+ LVTGLPPSASWQDLKDHMR+AGDVCFSQVFR++GG+TGIVDYTNYDD++YA+RKLDDSEF+NAFSRAYIRV+E
Sbjct: 1 MSSRSSRTIYVGNLPGDIRMREIEDLFMKYGPIVDIDLKVPPRPPGYAFIEFEDARDADDAIYGRDGYNFDGYRLRVELAHGGRGHSSSMDRYSSYSHSSSSRGASRRSDYRVLVTGLPPSASWQDLKDHMRRAGDVCFSQVFRDQGGMTGIVDYTNYDDMRYAIRKLDDSEFKNAFSRAYIRVKE 186
BLAST of Ca_03663 vs. TrEMBL
Match: M5VZF1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009360mg PE=4 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 8.236e-70 Identity = 131/186 (70.43%), Postives = 147/186 (79.03%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MS RSSRT+YVGNLPGDIRMRE+EDLF KYGPIVDIDLK+PP+PPGYAF+EFEDARDA DAI LRVELAHGGR +SSS+ LVTGLPPSASWQDLKDHMR+AGDVCFSQVFR++GG+TGIVDYTNYDD++YA+RKLDDSEF+NAFSRAYIRV+E
Sbjct: 1 MSSRSSRTIYVGNLPGDIRMREIEDLFMKYGPIVDIDLKVPPRPPGYAFIEFEDARDADDAIYGRDGYNFDGYRLRVELAHGGRGHSSSMDRYSSYSHSSSSRGASRRSDYRVLVTGLPPSASWQDLKDHMRRAGDVCFSQVFRDQGGMTGIVDYTNYDDMRYAIRKLDDSEFKNAFSRAYIRVKE 186
BLAST of Ca_03663 vs. DB:Swiss
Match: SR30_ARATH (Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR30 PE=1 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 2.474e-79 Identity = 141/186 (75.81%), Postives = 156/186 (83.87%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MS R +RT+YVGNLPGDIR EVEDLFYKYGPIVDIDLKIPP+PPGYAFVEFED RDA DAIY RDGYDFDG RLRVE+AHGGRR S SVDRYS +S + LVTGLPPSASWQDLKDHMRKAGDVCFS+VF +R G++G+VDY+NYDD+KYA+RKLD +EFRNAFS AYIRVRE
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRV--LVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVRE 184
BLAST of Ca_03663 vs. DB:Swiss
Match: SR34_ARATH (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 5.917e-76 Identity = 139/194 (71.65%), Postives = 159/194 (81.96%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXX--------XXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MS RSSRT+YVGNLPGDIR REVEDLF KYGP+V IDLK+PP+PPGYAFVEF+DARDA+DAI+ RDGYDFDG+RLRVELAHGGRR+S G G RG SRRS++RVLVTGLP SASWQDLKDHMRK GDVCFSQV+R+ G TG+VDYT Y+D+KYA++KLDD+EFRNAFS Y+RVRE
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVRE 194
BLAST of Ca_03663 vs. DB:Swiss
Match: SR34B_ARATH (Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR34B PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 6.161e-72 Identity = 139/195 (71.28%), Postives = 154/195 (78.97%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXX---------XXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MS RSSRT+YVGNLPGDIR REVEDLF KYGP+V IDLKIPP+PPGYAFVEFEDARDA DAIY RDGYDFDG+ LRVELAHGGRR+S G G G SRRS+YRV+V+GLP SASWQDLKDHMRK G+VCFSQVFR+ G TGIVDYT+Y+D+KYA LDD+EFRNAFS Y+RVRE
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDDTEFRNAFSHEYVRVRE 192
BLAST of Ca_03663 vs. DB:Swiss
Match: SR34A_ARATH (Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR34A PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 7.853e-68 Identity = 126/197 (63.96%), Postives = 151/197 (76.65%), Query Frame = 1 Query: 1 MSGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSS-----------VXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFRNAFSRAYIRVRE 558
MSGR SR++YVGNLPGDIR E+ED+FYKYG IVDI+LK+PP+PP Y FVEFE +RDA+DAI RDGY+ DG RLRVELAHGGR SSS G S GVSR S++RV+V GLP SASWQDLKDHMRKAGDVCF++V R+ G G+VDYTNYDD+KYA+RKLDD+EFRN ++R +IRV++
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKK 197
BLAST of Ca_03663 vs. DB:Swiss
Match: RSP3_CAEEL (Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans OX=6239 GN=rsp-3 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 9.965e-41 Identity = 102/200 (51.00%), Postives = 130/200 (65.00%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVE--------------LAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVRE 558
G + +YVGNLPGD+R +EVED+F+KYG I +D+K + P +AFVEFED RDA+DA+ RDGY+FDG R+RVE L GG + G G RR+ YRV+V GLPP+ SWQDLKDHMR AGDVC++ V R+ TG+V++T Y+DVKYAVRKLDD++FR + AYIRVRE
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGG---DHRGGDFRGGRGGGRGGGPQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD---GTGVVEFTRYEDVKYAVRKLDDTKFRSHEGETAYIRVRE 196
BLAST of Ca_03663 vs. DB:Swiss
Match: SRS1B_DANRE (Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=7955 GN=srsf1b PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.726e-39 Identity = 103/186 (55.38%), Postives = 130/186 (69.89%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXX-XXXXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR ++VED+FYKYG I DIDLK P +AFVEFED RDA+DA+Y RDGYD+DGYRLRVE GR G SRRS+YRV+V+GLPPS SWQDLKDHMR+AGDVC++ VFR+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 10 AGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192
BLAST of Ca_03663 vs. DB:Swiss
Match: SRSF1_CHICK (Serine/arginine-rich splicing factor 1 OS=Gallus gallus OX=9031 GN=SRSF1 PE=1 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 1.807e-39 Identity = 99/186 (53.23%), Postives = 126/186 (67.74%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXXXXXXXXX-XXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR +++ED+FYKYG I DIDLK P +AFVEFED RDA+DA+Y RDGYD+DGYRLRVE GR G G R RV+V+GLPPS SWQDLKDHMR+AGDVC++ VFR+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 11 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
BLAST of Ca_03663 vs. DB:Swiss
Match: SRSF1_PONAB (Serine/arginine-rich splicing factor 1 OS=Pongo abelii OX=9601 GN=SRSF1 PE=2 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 7.682e-39 Identity = 101/186 (54.30%), Postives = 130/186 (69.89%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXX-XXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR +++ED+FYKYG I DIDLK P +AFVEFED RDA+DA+Y RDGYD+DGYRLRVE GR G G SRRS+ RV+V+GLPPS SWQDLKDHMR+AGDVC++ V+R+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 11 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
BLAST of Ca_03663 vs. DB:Swiss
Match: SRSF1_PIG (Serine/arginine-rich splicing factor 1 OS=Sus scrofa OX=9823 GN=SRSF1 PE=2 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 7.682e-39 Identity = 101/186 (54.30%), Postives = 130/186 (69.89%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXX-XXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR +++ED+FYKYG I DIDLK P +AFVEFED RDA+DA+Y RDGYD+DGYRLRVE GR G G SRRS+ RV+V+GLPPS SWQDLKDHMR+AGDVC++ V+R+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 11 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
BLAST of Ca_03663 vs. DB:Swiss
Match: SRSF1_MOUSE (Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 7.682e-39 Identity = 101/186 (54.30%), Postives = 130/186 (69.89%), Query Frame = 1 Query: 4 SGRSSRTLYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIXXXXXXXXXXXXLRVELAHGGRRNSSSVXXXXXXXXXXXXXX-XXXXXXXXXLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAVRKLDDSEFR-NAFSRAYIRVR 555
+G + +YVGNLP DIR +++ED+FYKYG I DIDLK P +AFVEFED RDA+DA+Y RDGYD+DGYRLRVE GR G G SRRS+ RV+V+GLPPS SWQDLKDHMR+AGDVC++ V+R+ TG+V++ +D+ YAVRKLD+++FR + AYIRV+
Sbjct: 11 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193 The following BLAST results are available for this feature:
BLAST of Ca_03663 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_03663 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_03663 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 10 Position : 0 Zoom : x 1
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03663_v1.0_kabuli ID=Ca_03663_v1.0_kabuli; Name=Ca_03663; organism=Cicer arietinum; type=mRNA; length=756bpback to top protein sequence of Ca_03663_v1.0_kabuli >Ca_03663_v1.0_kabuli ID=Ca_03663_v1.0_kabuli; Name=Ca_03663_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=251bpback to top mRNA from alignment at Ca4:5862152..5864547- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03663_v1.0_kabuli ID=Ca_03663_v1.0_kabuli; Name=Ca_03663; organism=Cicer arietinum; type=mRNA; length=2396bp; location=Sequence derived from: Ca4:5862152..5864547- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:5862152..5864547- >Ca_03663_v1.0_kabuli ID=Ca_03663_v1.0_kabuli; Name=Ca_03663; organism=Cicer arietinum; type=CDS; length=756bp; location=Sequence derived from: Ca4:5862152..5864547- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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