Ca_03747, Ca_03747_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03747 vs. TrEMBL
Match: G7I6W4_MEDTR (Mitochondrial import inner membrane translocase subunit tim23 OS=Medicago truncatula GN=MTR_1g081230 PE=4 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.990e-56 Identity = 120/185 (64.86%), Postives = 131/185 (70.81%), Query Frame = 1 Query: 1 MADSSTIPNDSK-TRPYHPYQHLN-IPIDKLYNLPTSPEHLFHEEI-RKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
MADSST P D + TR YHPYQHLN +PIDKLYNLPTSPEHLF E+I RK RSWG+N+QYYTGTGYLS AE+GES+KLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLES M + RDTDD VNSAVAGLGTGA+YK +QALKRY+PI
Sbjct: 1 MADSSTNPKDHQNTRLYHPYQHLNNVPIDKLYNLPTSPEHLFQEDIIRKHRSWGENVQYYTGTGYLSGAIIGGARGTVQGLREAEAGESVKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESGMTYFRDTDDLVNSAVAGLGTGAIYKAAAGPRSAAIAGAVGGIVAAVAVAGRQALKRYVPI 185
BLAST of Ca_03747 vs. TrEMBL
Match: I1NIP2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.437e-50 Identity = 110/184 (59.78%), Postives = 122/184 (66.30%), Query Frame = 1 Query: 1 MADSSTIPNDS-KTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEEI-RKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
MADSS+ D TR YHPYQ LN+PI KLYNLPT+PEHLF EE R RSWGDNLQYYTG+GYL+ AES +SLK+R+NRVLNSGG GRRLGNSLGV+GLIFAGLES M H+R TDD VNSAVAGLGTGALY+ KQALKRY+PI
Sbjct: 1 MADSSSNSKDHHNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGSGYLAGAITGAARGTVQGLREAESADSLKIRLNRVLNSGGLAGRRLGNSLGVVGLIFAGLESGMTHLRGTDDLVNSAVAGLGTGALYRAAAGPQSAAIAGAIGGIAAAAAVAGKQALKRYVPI 184
BLAST of Ca_03747 vs. TrEMBL
Match: I1LBK4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 7.134e-50 Identity = 108/184 (58.70%), Postives = 122/184 (66.30%), Query Frame = 1 Query: 1 MADSSTIPNDS-KTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEEI-RKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
MADSS+ D TR YHPYQ LN+PI KLYNLPT+PEHLF EE R RSWGDNLQYYTG+GYL+ AESG+SLK+R+NRVLNSGG GRRLGNSLGV+GLIFAGLES M ++R TDD VNSAVAGLGTG L++ KQALKRY+PI
Sbjct: 1 MADSSSNSKDHHNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGSGYLAGALIGAARGTVQGLREAESGDSLKIRLNRVLNSGGHAGRRLGNSLGVVGLIFAGLESGMTYLRGTDDLVNSAVAGLGTGTLFRAAAGPRSAAIAGAIGGIAAAAAVSGKQALKRYVPI 184
BLAST of Ca_03747 vs. TrEMBL
Match: D7SV51_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06730 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.030e-48 Identity = 105/183 (57.38%), Postives = 120/183 (65.57%), Query Frame = 1 Query: 1 MADSSTIPNDSKTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
MAD ST N KTR YHPYQ L +PI LYNLPTSPE+LF EE + +RRSW +NLQYYTG+GYLS AE+G++LKLRVNRVLNSGGQ GRR GNS+GVLGLIF+GLES MIH RDTDD +NS AGLGTGALY+ KQ +KRY+PI
Sbjct: 1 MADQSTDSN-RKTRVYHPYQDLQVPIQNLYNLPTSPEYLFDEESLHQRRSWSENLQYYTGSGYLSGAIIGGAKGSIEGIRAAEAGDTLKLRVNRVLNSGGQTGRRFGNSMGVLGLIFSGLESGMIHWRDTDDMLNSVFAGLGTGALYRAAAGPRSAVIAGAIGGLAAGAAVAGKQVMKRYVPI 182
BLAST of Ca_03747 vs. TrEMBL
Match: B9I5E3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_662902 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 4.328e-47 Identity = 100/177 (56.50%), Postives = 115/177 (64.97%), Query Frame = 1 Query: 22 PNDSKTRPYHPYQHL-NIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
PND K R YHPYQ L N+P LYNLPTSPE LFHEE + +RRSW +NLQYYTGTGYLS AE GESLKLRVNRVLNSGG GR+ GN+LGVLGL+FAG+ES +IH RDTDD VN+ +AGL TGA+Y+ KQA+KRY+PI
Sbjct: 4 PNDHKYRKYHPYQDLYNVPAQNLYNLPTSPEFLFHEESLTQRRSWSENLQYYTGTGYLSGAILGGAKGSIEGIRAAEPGESLKLRVNRVLNSGGHAGRKFGNNLGVLGLMFAGIESGLIHWRDTDDLVNTVLAGLSTGAIYRAAKGPRSAAIAGAIGGIAAAGAVAAKQAVKRYVPI 180
BLAST of Ca_03747 vs. TrEMBL
Match: A5BS90_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008665 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.259e-46 Identity = 98/148 (66.22%), Postives = 111/148 (75.00%), Query Frame = 1 Query: 1 MADSSTIPNDSKTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYK 441
MAD ST N KTR YHPYQ L +PI LYNLPTSPE+LF EE + +RRSW +NLQYYTG+GYLS AE+G++LKLRVNRVLNSGGQ GRR GNS+GVLGLIF+GLES MIH RDTDD +NS AGLGTGALY+
Sbjct: 1 MADQSTDSN-RKTRVYHPYQDLQVPIQNLYNLPTSPEYLFDEESLHQRRSWSENLQYYTGSGYLSGAIIGGAKGSIEGIRAAEAGDTLKLRVNRVLNSGGQTGRRFGNSMGVLGLIFSGLESGMIHWRDTDDMLNSVFAGLGTGALYR 147
BLAST of Ca_03747 vs. TrEMBL
Match: B9MZF1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_595440 PE=4 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 3.102e-45 Identity = 97/177 (54.80%), Postives = 114/177 (64.41%), Query Frame = 1 Query: 22 PNDSKTRPYHPYQHL-NIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
PND K R YHPYQ L N+P LY LPTSPE LFHEE + +RRSW ++LQYYTGTGYL+ AE GE+LKLRVNRVLNSGG GRR GN+LGVLGL+FAG+ES +IH RDTDD VN+ +AGL TGA+Y+ KQA+KRY+PI
Sbjct: 4 PNDHKYRKYHPYQDLYNVPAQNLYKLPTSPEFLFHEESLHQRRSWSESLQYYTGTGYLAGAILGGAKGSVEGIRAAEPGETLKLRVNRVLNSGGHMGRRFGNNLGVLGLMFAGIESGLIHWRDTDDLVNTVLAGLSTGAIYRAAKGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI 180
BLAST of Ca_03747 vs. TrEMBL
Match: B9REQ6_RICCO (Mitochondrial import inner membrane translocase subunit tim23, putative OS=Ricinus communis GN=RCOM_1427800 PE=4 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.220e-41 Identity = 86/141 (60.99%), Postives = 103/141 (73.05%), Query Frame = 1 Query: 25 NDSKTRPYHPYQHL-NIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYK 441
ND K YHPYQ L N+P LY LPTSPE LFHEE + +RRSW +NLQYYTGTGYLS AE G+++KLRVNRVLNSGG GR+ GN+LGVLGL+FAG+ES +IH RD DD +N+A+AGLGTGA+Y+
Sbjct: 6 NDKKYLTYHPYQDLYNVPAQSLYKLPTSPEFLFHEEALCQRRSWSENLQYYTGTGYLSGAIVGAAKGSLDGIRSAEPGDTMKLRVNRVLNSGGHMGRKFGNNLGVLGLMFAGIESVLIHYRDADDLINTALAGLGTGAIYR 146
BLAST of Ca_03747 vs. TrEMBL
Match: F6HXZ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g01810 PE=4 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.761e-40 Identity = 89/182 (48.90%), Postives = 110/182 (60.44%), Query Frame = 1 Query: 7 DSSTIPNDSKTRP-YHPYQHLNIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
D T ND+ R Y+PYQ L IPI +Y LPTSPE LF EE + +RRSWG+NL YYTG GYLS +E G+++KLR+NR+LN+ G GR+ GN GV+GL++AGLES ++ VRDTDD VNS VAGLGTGALY+ KQ LKRY+PI
Sbjct: 2 DQRTSQNDNDNRRLYNPYQDLQIPIQNIYKLPTSPEFLFQEESVAQRRSWGENLTYYTGIGYLSGALSGAAKGLVDGVKASEPGDTVKLRINRILNASGHAGRKFGNRAGVIGLMYAGLESGIVAVRDTDDVVNSVVAGLGTGALYRAAAGVRSAAVAGAIGGVVVGAAVTAKQVLKRYVPI 183
BLAST of Ca_03747 vs. TrEMBL
Match: M1DSE8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400043220 PE=4 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 8.741e-40 Identity = 83/170 (48.82%), Postives = 107/170 (62.94%), Query Frame = 1 Query: 40 RPYHPYQHLNIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
R Y+PYQ+L +PI LY LP+SPE LFHEE + +RRSWG+NL +YTG GYLS +E G++LKLR+NR+LN G GR+ GN +GV+GL++AGLES M+ +RDTDD +NS VAGLGTGA Y+ KQA+KRY+PI
Sbjct: 16 RLYNPYQNLQVPIKTLYKLPSSPEFLFHEESLAQRRSWGENLTFYTGIGYLSGSVVGAGKGFIEGVKASEPGDTLKLRINRILNGSGHTGRKFGNRVGVIGLMYAGLESGMVAIRDTDDVINSVVAGLGTGAFYRAAAGLRSAAVAGVIGGAVVGLGVAAKQAMKRYVPI 185
BLAST of Ca_03747 vs. SwissProt
Match: TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana GN=TIM23-1 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.494e-36 Identity = 80/182 (43.96%), Postives = 105/182 (57.69%), Query Frame = 1 Query: 10 SSTIPNDSKTRPYHPYQHLNIPIDK--LYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
SS +D TR YHPYQ+ +PI LY LPTSPE LF EE +++RRSWG+NL +YTGTGYL+ E+G++ KL++NR+LNS GQ GR GN +G++GLI+AG+ES ++ V D DD S VAGLGTGA+++ KQ KRY I
Sbjct: 6 SSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFKRYAHI 187
BLAST of Ca_03747 vs. SwissProt
Match: TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana GN=TIM23-2 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.449e-35 Identity = 78/178 (43.82%), Postives = 104/178 (58.43%), Query Frame = 1 Query: 25 NDSKTRPYHPYQHLNIPIDK---LYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
+D TR Y+PYQ+ +PI+K LY LPTSPE LF EE +R+RRSWG+NL +YTGT YL ESG++ KL++NR+LNS GQ GR GN +G++GL++AG+ES ++ D DD S VAGLGTGA+ + KQ +KRY+PI
Sbjct: 11 SDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKRYVPI 188
BLAST of Ca_03747 vs. SwissProt
Match: TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana GN=TIM23-3 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.697e-32 Identity = 75/184 (40.76%), Postives = 102/184 (55.43%), Query Frame = 1 Query: 1 MADSSTIPNDSKTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEEIRKRR-SWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDD-FVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
M S+ K R Y+PYQ +N+P KLY LPTSPE LF EE K+R +WG+NL ++TG GY + AE GESLK+R NR+LNSGG RR GN LG +GL+FA +ES + ++RD DD + + +AGL TG LY+ ++ +KR++PI
Sbjct: 5 MNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGWGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAMESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKRFVPI 188
BLAST of Ca_03747 vs. SwissProt
Match: TIM23_SCHPO (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tim23 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.459e-11 Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 1 Query: 4 ADSSTIPNDSKTRP--YHPYQHLNIPIDKLYNLPTSPEHLFHEEIR-KRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYK 441
A +S I + S+ P HP L+ P+D L + L + + R W D+L Y TGT YLS + S +LR+N +LN + G +GNSLGVL L++ G+ S + + R + NS AG TGALYK
Sbjct: 28 ATASDILSGSEFDPAKLHPLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSYLSGLAIGGLWGLNEGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINSLIGYKRQKHGWENSVAAGALTGALYK 176
BLAST of Ca_03747 vs. DB:Swiss
Match: TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana OX=3702 GN=TIM23-1 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.001e-46 Identity = 104/182 (57.14%), Postives = 134/182 (73.63%), Query Frame = 1 Query: 10 SSTIPNDSKTRPYHPYQHLNIPIDK--LYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
SS +D TR YHPYQ+ +PI LY LPTSPE LF EE +++RRSWG+NL +YTGTGYL+G++ G + G GIK+ E+G++ KL++NR+LNS GQ GR GN +G++GLI+AG+ES ++ V D DD S VAGLGTGA+++AA G RSAA+AGA GGI A VVAGKQ KRY I
Sbjct: 6 SSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFKRYAHI 187
BLAST of Ca_03747 vs. DB:Swiss
Match: TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana OX=3702 GN=TIM23-2 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.292e-46 Identity = 101/178 (56.74%), Postives = 135/178 (75.84%), Query Frame = 1 Query: 25 NDSKTRPYHPYQHLNIPIDK---LYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
+D TR Y+PYQ+ +PI+K LY LPTSPE LF EE +R+RRSWG+NL +YTGT YL G++ G + G I G+K+ ESG++ KL++NR+LNS GQ GR GN +G++GL++AG+ES ++ D DD S VAGLGTGA+ +AA G RSAA+AGA+GG+ A VVAGKQ +KRY+PI
Sbjct: 11 SDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKRYVPI 188
BLAST of Ca_03747 vs. DB:Swiss
Match: TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana OX=3702 GN=TIM23-3 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.193e-41 Identity = 100/184 (54.35%), Postives = 135/184 (73.37%), Query Frame = 1 Query: 1 MADSSTIPNDSKTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEEIRKRR-SWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDD-FVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
M S+ K R Y+PYQ +N+P KLY LPTSPE LF EE K+R +WG+NL ++TG GY +G+++G KGTI G++AAE GESLK+R NR+LNSGG RR GN LG +GL+FA +ES + ++RD DD + + +AGL TG LY+AA+GPRSA +AGAVGG+ A VAG++ +KR++PI
Sbjct: 5 MNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGWGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAMESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKRFVPI 188
BLAST of Ca_03747 vs. DB:Swiss
Match: TIM23_SCHPO (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim23 PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 4.692e-12 Identity = 59/149 (39.60%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 4 ADSSTIPNDSKTRP--YHPYQHLNIPIDKLYNLPTSPEHLFHEEIR-KRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYK 441
A +S I + S+ P HP L+ P+D L + L + + R W D+L Y TGT YLSG IGG G EG+K + S +LR+N +LN + G +GNSLGVL L++ G+ S + + R + NS AG TGALYK
Sbjct: 28 ATASDILSGSEFDPAKLHPLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSYLSGLAIGGLWGLNEGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINSLIGYKRQKHGWENSVAAGALTGALYK 176 The following BLAST results are available for this feature:
BLAST of Ca_03747 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_03747 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 4 Position : 0 Zoom : x 1
BLAST of Ca_03747 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 4 Position : 0 Zoom : x 1
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03747_v1.0_kabuli ID=Ca_03747_v1.0_kabuli; Name=Ca_03747; organism=Cicer arietinum; type=mRNA; length=549bpback to top protein sequence of Ca_03747_v1.0_kabuli >Ca_03747_v1.0_kabuli ID=Ca_03747_v1.0_kabuli; Name=Ca_03747_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=182bpback to top mRNA from alignment at Ca4:5092097..5092645+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03747_v1.0_kabuli ID=Ca_03747_v1.0_kabuli; Name=Ca_03747; organism=Cicer arietinum; type=mRNA; length=549bp; location=Sequence derived from: Ca4:5092097..5092645+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:5092097..5092645+ >Ca_03747_v1.0_kabuli ID=Ca_03747_v1.0_kabuli; Name=Ca_03747; organism=Cicer arietinum; type=CDS; length=549bp; location=Sequence derived from: Ca4:5092097..5092645+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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