Ca_03747, Ca_03747_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_03747
Unique NameCa_03747_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length549
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:5092097..5092645 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR253Pisum sativum Cameor genome v1aPisum sativum
capsR277Pisum sativum Cameor genome v1aPisum sativum
capsR300Pisum sativum Cameor genome v1aPisum sativum
cavuR298Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR318Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR360Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR385Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0475Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0507Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0443Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0697Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0827Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0828Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1121Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL189Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL277Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR247Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR279Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR289Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR309Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR286Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR345Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR353Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR307Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR349Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR355Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR262Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR332Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR380Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR394Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR280Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR282Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR125Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL136Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL377Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR278Cicer arietinum
cacarR286Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat6g146840.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.007G186600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_15547Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014657572.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr07.1283Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.3g069080.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Va02G053330.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun07g154400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan10g097000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat06G0396200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Hedin2.R1.3g083040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg3138.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004495734.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_03747-CDS1Ca_03747-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_03747_v1.0_kabuliCa_03747_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_03747 vs. TrEMBL
Match: G7I6W4_MEDTR (Mitochondrial import inner membrane translocase subunit tim23 OS=Medicago truncatula GN=MTR_1g081230 PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.990e-56
Identity = 120/185 (64.86%), Postives = 131/185 (70.81%), Query Frame = 1 
Query:    1 MADSSTIPNDSK-TRPYHPYQHLN-IPIDKLYNLPTSPEHLFHEEI-RKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            MADSST P D + TR YHPYQHLN +PIDKLYNLPTSPEHLF E+I RK RSWG+N+QYYTGTGYLS                AE+GES+KLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLES M + RDTDD VNSAVAGLGTGA+YK                         +QALKRY+PI
Sbjct:    1 MADSSTNPKDHQNTRLYHPYQHLNNVPIDKLYNLPTSPEHLFQEDIIRKHRSWGENVQYYTGTGYLSGAIIGGARGTVQGLREAEAGESVKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESGMTYFRDTDDLVNSAVAGLGTGAIYKAAAGPRSAAIAGAVGGIVAAVAVAGRQALKRYVPI 185
[Close]
BLAST of Ca_03747 vs. TrEMBL
Match: I1NIP2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 1.437e-50
Identity = 110/184 (59.78%), Postives = 122/184 (66.30%), Query Frame = 1 
Query:    1 MADSSTIPNDS-KTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEEI-RKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            MADSS+   D   TR YHPYQ LN+PI KLYNLPT+PEHLF EE  R  RSWGDNLQYYTG+GYL+                AES +SLK+R+NRVLNSGG  GRRLGNSLGV+GLIFAGLES M H+R TDD VNSAVAGLGTGALY+                         KQALKRY+PI
Sbjct:    1 MADSSSNSKDHHNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGSGYLAGAITGAARGTVQGLREAESADSLKIRLNRVLNSGGLAGRRLGNSLGVVGLIFAGLESGMTHLRGTDDLVNSAVAGLGTGALYRAAAGPQSAAIAGAIGGIAAAAAVAGKQALKRYVPI 184
[Close]
BLAST of Ca_03747 vs. TrEMBL
Match: I1LBK4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 7.134e-50
Identity = 108/184 (58.70%), Postives = 122/184 (66.30%), Query Frame = 1 
Query:    1 MADSSTIPNDS-KTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEEI-RKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            MADSS+   D   TR YHPYQ LN+PI KLYNLPT+PEHLF EE  R  RSWGDNLQYYTG+GYL+                AESG+SLK+R+NRVLNSGG  GRRLGNSLGV+GLIFAGLES M ++R TDD VNSAVAGLGTG L++                         KQALKRY+PI
Sbjct:    1 MADSSSNSKDHHNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGSGYLAGALIGAARGTVQGLREAESGDSLKIRLNRVLNSGGHAGRRLGNSLGVVGLIFAGLESGMTYLRGTDDLVNSAVAGLGTGTLFRAAAGPRSAAIAGAIGGIAAAAAVSGKQALKRYVPI 184
[Close]
BLAST of Ca_03747 vs. TrEMBL
Match: D7SV51_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06730 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.030e-48
Identity = 105/183 (57.38%), Postives = 120/183 (65.57%), Query Frame = 1 
Query:    1 MADSSTIPNDSKTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            MAD ST  N  KTR YHPYQ L +PI  LYNLPTSPE+LF EE + +RRSW +NLQYYTG+GYLS                AE+G++LKLRVNRVLNSGGQ GRR GNS+GVLGLIF+GLES MIH RDTDD +NS  AGLGTGALY+                         KQ +KRY+PI
Sbjct:    1 MADQSTDSN-RKTRVYHPYQDLQVPIQNLYNLPTSPEYLFDEESLHQRRSWSENLQYYTGSGYLSGAIIGGAKGSIEGIRAAEAGDTLKLRVNRVLNSGGQTGRRFGNSMGVLGLIFSGLESGMIHWRDTDDMLNSVFAGLGTGALYRAAAGPRSAVIAGAIGGLAAGAAVAGKQVMKRYVPI 182
[Close]
BLAST of Ca_03747 vs. TrEMBL
Match: B9I5E3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_662902 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 4.328e-47
Identity = 100/177 (56.50%), Postives = 115/177 (64.97%), Query Frame = 1 
Query:   22 PNDSKTRPYHPYQHL-NIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            PND K R YHPYQ L N+P   LYNLPTSPE LFHEE + +RRSW +NLQYYTGTGYLS                AE GESLKLRVNRVLNSGG  GR+ GN+LGVLGL+FAG+ES +IH RDTDD VN+ +AGL TGA+Y+                         KQA+KRY+PI
Sbjct:    4 PNDHKYRKYHPYQDLYNVPAQNLYNLPTSPEFLFHEESLTQRRSWSENLQYYTGTGYLSGAILGGAKGSIEGIRAAEPGESLKLRVNRVLNSGGHAGRKFGNNLGVLGLMFAGIESGLIHWRDTDDLVNTVLAGLSTGAIYRAAKGPRSAAIAGAIGGIAAAGAVAAKQAVKRYVPI 180
[Close]
BLAST of Ca_03747 vs. TrEMBL
Match: A5BS90_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008665 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.259e-46
Identity = 98/148 (66.22%), Postives = 111/148 (75.00%), Query Frame = 1 
Query:    1 MADSSTIPNDSKTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYK 441
            MAD ST  N  KTR YHPYQ L +PI  LYNLPTSPE+LF EE + +RRSW +NLQYYTG+GYLS                AE+G++LKLRVNRVLNSGGQ GRR GNS+GVLGLIF+GLES MIH RDTDD +NS  AGLGTGALY+
Sbjct:    1 MADQSTDSN-RKTRVYHPYQDLQVPIQNLYNLPTSPEYLFDEESLHQRRSWSENLQYYTGSGYLSGAIIGGAKGSIEGIRAAEAGDTLKLRVNRVLNSGGQTGRRFGNSMGVLGLIFSGLESGMIHWRDTDDMLNSVFAGLGTGALYR 147
[Close]
BLAST of Ca_03747 vs. TrEMBL
Match: B9MZF1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_595440 PE=4 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 3.102e-45
Identity = 97/177 (54.80%), Postives = 114/177 (64.41%), Query Frame = 1 
Query:   22 PNDSKTRPYHPYQHL-NIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            PND K R YHPYQ L N+P   LY LPTSPE LFHEE + +RRSW ++LQYYTGTGYL+                AE GE+LKLRVNRVLNSGG  GRR GN+LGVLGL+FAG+ES +IH RDTDD VN+ +AGL TGA+Y+                         KQA+KRY+PI
Sbjct:    4 PNDHKYRKYHPYQDLYNVPAQNLYKLPTSPEFLFHEESLHQRRSWSESLQYYTGTGYLAGAILGGAKGSVEGIRAAEPGETLKLRVNRVLNSGGHMGRRFGNNLGVLGLMFAGIESGLIHWRDTDDLVNTVLAGLSTGAIYRAAKGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI 180
[Close]
BLAST of Ca_03747 vs. TrEMBL
Match: B9REQ6_RICCO (Mitochondrial import inner membrane translocase subunit tim23, putative OS=Ricinus communis GN=RCOM_1427800 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.220e-41
Identity = 86/141 (60.99%), Postives = 103/141 (73.05%), Query Frame = 1 
Query:   25 NDSKTRPYHPYQHL-NIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYK 441
            ND K   YHPYQ L N+P   LY LPTSPE LFHEE + +RRSW +NLQYYTGTGYLS                AE G+++KLRVNRVLNSGG  GR+ GN+LGVLGL+FAG+ES +IH RD DD +N+A+AGLGTGA+Y+
Sbjct:    6 NDKKYLTYHPYQDLYNVPAQSLYKLPTSPEFLFHEEALCQRRSWSENLQYYTGTGYLSGAIVGAAKGSLDGIRSAEPGDTMKLRVNRVLNSGGHMGRKFGNNLGVLGLMFAGIESVLIHYRDADDLINTALAGLGTGAIYR 146
[Close]
BLAST of Ca_03747 vs. TrEMBL
Match: F6HXZ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g01810 PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.761e-40
Identity = 89/182 (48.90%), Postives = 110/182 (60.44%), Query Frame = 1 
Query:    7 DSSTIPNDSKTRP-YHPYQHLNIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            D  T  ND+  R  Y+PYQ L IPI  +Y LPTSPE LF EE + +RRSWG+NL YYTG GYLS                +E G+++KLR+NR+LN+ G  GR+ GN  GV+GL++AGLES ++ VRDTDD VNS VAGLGTGALY+                         KQ LKRY+PI
Sbjct:    2 DQRTSQNDNDNRRLYNPYQDLQIPIQNIYKLPTSPEFLFQEESVAQRRSWGENLTYYTGIGYLSGALSGAAKGLVDGVKASEPGDTVKLRINRILNASGHAGRKFGNRAGVIGLMYAGLESGIVAVRDTDDVVNSVVAGLGTGALYRAAAGVRSAAVAGAIGGVVVGAAVTAKQVLKRYVPI 183
[Close]
BLAST of Ca_03747 vs. TrEMBL
Match: M1DSE8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400043220 PE=4 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 8.741e-40
Identity = 83/170 (48.82%), Postives = 107/170 (62.94%), Query Frame = 1 
Query:   40 RPYHPYQHLNIPIDKLYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            R Y+PYQ+L +PI  LY LP+SPE LFHEE + +RRSWG+NL +YTG GYLS                +E G++LKLR+NR+LN  G  GR+ GN +GV+GL++AGLES M+ +RDTDD +NS VAGLGTGA Y+                         KQA+KRY+PI
Sbjct:   16 RLYNPYQNLQVPIKTLYKLPSSPEFLFHEESLAQRRSWGENLTFYTGIGYLSGSVVGAGKGFIEGVKASEPGDTLKLRINRILNGSGHTGRKFGNRVGVIGLMYAGLESGMVAIRDTDDVINSVVAGLGTGAFYRAAAGLRSAAVAGVIGGAVVGLGVAAKQAMKRYVPI 185
[Close]
BLAST of Ca_03747 vs. SwissProt
Match: TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana GN=TIM23-1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.494e-36
Identity = 80/182 (43.96%), Postives = 105/182 (57.69%), Query Frame = 1 
Query:   10 SSTIPNDSKTRPYHPYQHLNIPIDK--LYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            SS   +D  TR YHPYQ+  +PI    LY LPTSPE LF EE +++RRSWG+NL +YTGTGYL+                 E+G++ KL++NR+LNS GQ GR  GN +G++GLI+AG+ES ++ V D DD   S VAGLGTGA+++                         KQ  KRY  I
Sbjct:    6 SSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFKRYAHI 187
[Close]
BLAST of Ca_03747 vs. SwissProt
Match: TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana GN=TIM23-2 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.449e-35
Identity = 78/178 (43.82%), Postives = 104/178 (58.43%), Query Frame = 1 
Query:   25 NDSKTRPYHPYQHLNIPIDK---LYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            +D  TR Y+PYQ+  +PI+K   LY LPTSPE LF EE +R+RRSWG+NL +YTGT YL                  ESG++ KL++NR+LNS GQ GR  GN +G++GL++AG+ES ++   D DD   S VAGLGTGA+ +                         KQ +KRY+PI
Sbjct:   11 SDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKRYVPI 188
[Close]
BLAST of Ca_03747 vs. SwissProt
Match: TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana GN=TIM23-3 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.697e-32
Identity = 75/184 (40.76%), Postives = 102/184 (55.43%), Query Frame = 1 
Query:    1 MADSSTIPNDSKTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEEIRKRR-SWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDD-FVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            M  S+      K R Y+PYQ +N+P  KLY LPTSPE LF EE  K+R +WG+NL ++TG GY +                AE GESLK+R NR+LNSGG   RR GN LG +GL+FA +ES + ++RD DD  + + +AGL TG LY+                         ++ +KR++PI
Sbjct:    5 MNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGWGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAMESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKRFVPI 188
[Close]
BLAST of Ca_03747 vs. SwissProt
Match: TIM23_SCHPO (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tim23 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.459e-11
Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 1 
Query:    4 ADSSTIPNDSKTRP--YHPYQHLNIPIDKLYNLPTSPEHLFHEEIR-KRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYK 441
            A +S I + S+  P   HP   L+ P+D L     +   L  + +    R W D+L Y TGT YLS                 +   S +LR+N +LN   + G  +GNSLGVL L++ G+ S + + R    + NS  AG  TGALYK
Sbjct:   28 ATASDILSGSEFDPAKLHPLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSYLSGLAIGGLWGLNEGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINSLIGYKRQKHGWENSVAAGALTGALYK 176
[Close]
BLAST of Ca_03747 vs. DB:Swiss
Match: TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana OX=3702 GN=TIM23-1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.001e-46
Identity = 104/182 (57.14%), Postives = 134/182 (73.63%), Query Frame = 1 
Query:   10 SSTIPNDSKTRPYHPYQHLNIPIDK--LYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            SS   +D  TR YHPYQ+  +PI    LY LPTSPE LF EE +++RRSWG+NL +YTGTGYL+G++ G + G   GIK+ E+G++ KL++NR+LNS GQ GR  GN +G++GLI+AG+ES ++ V D DD   S VAGLGTGA+++AA G RSAA+AGA GGI A  VVAGKQ  KRY  I
Sbjct:    6 SSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFKRYAHI 187
[Close]
BLAST of Ca_03747 vs. DB:Swiss
Match: TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana OX=3702 GN=TIM23-2 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.292e-46
Identity = 101/178 (56.74%), Postives = 135/178 (75.84%), Query Frame = 1 
Query:   25 NDSKTRPYHPYQHLNIPIDK---LYNLPTSPEHLFHEE-IRKRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            +D  TR Y+PYQ+  +PI+K   LY LPTSPE LF EE +R+RRSWG+NL +YTGT YL G++ G + G I G+K+ ESG++ KL++NR+LNS GQ GR  GN +G++GL++AG+ES ++   D DD   S VAGLGTGA+ +AA G RSAA+AGA+GG+ A  VVAGKQ +KRY+PI
Sbjct:   11 SDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKRYVPI 188
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BLAST of Ca_03747 vs. DB:Swiss
Match: TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana OX=3702 GN=TIM23-3 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.193e-41
Identity = 100/184 (54.35%), Postives = 135/184 (73.37%), Query Frame = 1 
Query:    1 MADSSTIPNDSKTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEEIRKRR-SWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDD-FVNSAVAGLGTGALYKXXXXXXXXXXXXXXXXXXXXXXXXXKQALKRYIPI 546
            M  S+      K R Y+PYQ +N+P  KLY LPTSPE LF EE  K+R +WG+NL ++TG GY +G+++G  KGTI G++AAE GESLK+R NR+LNSGG   RR GN LG +GL+FA +ES + ++RD DD  + + +AGL TG LY+AA+GPRSA +AGAVGG+ A   VAG++ +KR++PI
Sbjct:    5 MNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGWGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAMESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKRFVPI 188
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BLAST of Ca_03747 vs. DB:Swiss
Match: TIM23_SCHPO (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim23 PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 4.692e-12
Identity = 59/149 (39.60%), Postives = 81/149 (54.36%), Query Frame = 1 
Query:    4 ADSSTIPNDSKTRP--YHPYQHLNIPIDKLYNLPTSPEHLFHEEIR-KRRSWGDNLQYYTGTGYLSXXXXXXXXXXXXXXXXAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYK 441
            A +S I + S+  P   HP   L+ P+D L     +   L  + +    R W D+L Y TGT YLSG  IGG  G  EG+K  +   S +LR+N +LN   + G  +GNSLGVL L++ G+ S + + R    + NS  AG  TGALYK
Sbjct:   28 ATASDILSGSEFDPAKLHPLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSYLSGLAIGGLWGLNEGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINSLIGYKRQKHGWENSVAAGALTGALYK 176
The following BLAST results are available for this feature:
BLAST of Ca_03747 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7I6W4_MEDTR2.990e-5664.86Mitochondrial import inner membrane translocase su... [more]
I1NIP2_SOYBN1.437e-5059.78Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1LBK4_SOYBN7.134e-5058.70Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
D7SV51_VITVI1.030e-4857.38Putative uncharacterized protein OS=Vitis vinifera... [more]
B9I5E3_POPTR4.328e-4756.50Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5BS90_VITVI1.259e-4666.22Putative uncharacterized protein OS=Vitis vinifera... [more]
B9MZF1_POPTR3.102e-4554.80Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9REQ6_RICCO1.220e-4160.99Mitochondrial import inner membrane translocase su... [more]
F6HXZ8_VITVI1.761e-4048.90Putative uncharacterized protein OS=Vitis vinifera... [more]
M1DSE8_SOLTU8.741e-4048.82Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]

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BLAST of Ca_03747 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
TI231_ARATH8.494e-3643.96Mitochondrial import inner membrane translocase su... [more]
TI232_ARATH1.449e-3543.82Mitochondrial import inner membrane translocase su... [more]
TI233_ARATH5.697e-3240.76Mitochondrial import inner membrane translocase su... [more]
TIM23_SCHPO1.459e-1134.23Mitochondrial import inner membrane translocase su... [more]
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BLAST of Ca_03747 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
TI231_ARATH2.001e-4657.14Mitochondrial import inner membrane translocase su... [more]
TI232_ARATH3.292e-4656.74Mitochondrial import inner membrane translocase su... [more]
TI233_ARATH1.193e-4154.35Mitochondrial import inner membrane translocase su... [more]
TIM23_SCHPO4.692e-1239.60Mitochondrial import inner membrane translocase su... [more]
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Expression

Available Analyses

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Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24PFAMPF02466Tim17coord: 49..174
score: 4.5
NoneNo IPR availablePANTHERPTHR15371FAMILY NOT NAMEDcoord: 10..182
score: 4.8
NoneNo IPR availableSEGsegsegcoord: 65..80
score: NAcoord: 148..172
score
NoneNo IPR availableSEGsegsegcoord: 18..34
score
NoneNo IPR availableSEGsegsegcoord: 45..59
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_03747_v1.0_kabuli ID=Ca_03747_v1.0_kabuli; Name=Ca_03747; organism=Cicer arietinum; type=mRNA; length=549bp
ATGGCTGATTCTTCAACCATCCCAAACGACTCTAAAACACGTCCTTATCA
TCCCTACCAGCACCTCAACATTCCCATCGACAAACTCTACAACCTCCCCA
CCTCACCGGAGCATCTTTTCCACGAAGAAATCAGAAAGCGCCGTTCTTGG
GGCGACAATCTTCAATACTACACCGGCACCGGCTACCTCTCCGGCGCGAT
CATCGGAGGCACCAAGGGAACCATTGAAGGCATCAAGGCTGCCGAATCCG
GTGAATCTCTTAAGCTCCGGGTTAACCGAGTTCTTAATTCGGGTGGTCAG
GGAGGTAGAAGACTCGGTAACTCGCTTGGCGTGTTAGGTTTGATCTTTGC
GGGGTTGGAGAGTGCTATGATTCATGTTAGGGACACGGATGATTTTGTTA
ATAGTGCTGTCGCCGGACTTGGGACCGGAGCGCTTTACAAGGCTGCGGCG
GGACCTCGGTCGGCTGCTATTGCCGGTGCTGTTGGCGGGATTACGGCAGC
TGTGGTAGTTGCTGGAAAGCAAGCTTTGAAACGATACATTCCTATATAA
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protein sequence of Ca_03747_v1.0_kabuli

>Ca_03747_v1.0_kabuli ID=Ca_03747_v1.0_kabuli; Name=Ca_03747_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=182bp
MADSSTIPNDSKTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEEIRKRRSW
GDNLQYYTGTGYLSGAIIGGTKGTIEGIKAAESGESLKLRVNRVLNSGGQ
GGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKAAA
GPRSAAIAGAVGGITAAVVVAGKQALKRYIPI
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mRNA from alignment at Ca4:5092097..5092645+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_03747_v1.0_kabuli ID=Ca_03747_v1.0_kabuli; Name=Ca_03747; organism=Cicer arietinum; type=mRNA; length=549bp; location=Sequence derived from: Ca4:5092097..5092645+ (Cicer arietinum
ATGGCTGATTCTTCAACCATCCCAAACGACTCTAAAACACGTCCTTATCA
TCCCTACCAGCACCTCAACATTCCCATCGACAAACTCTACAACCTCCCCA
CCTCACCGGAGCATCTTTTCCACGAAGAAATCAGAAAGCGCCGTTCTTGG
GGCGACAATCTTCAATACTACACCGGCACCGGCTACCTCTCCGGCGCGAT
CATCGGAGGCACCAAGGGAACCATTGAAGGCATCAAGGCTGCCGAATCCG
GTGAATCTCTTAAGCTCCGGGTTAACCGAGTTCTTAATTCGGGTGGTCAG
GGAGGTAGAAGACTCGGTAACTCGCTTGGCGTGTTAGGTTTGATCTTTGC
GGGGTTGGAGAGTGCTATGATTCATGTTAGGGACACGGATGATTTTGTTA
ATAGTGCTGTCGCCGGACTTGGGACCGGAGCGCTTTACAAGGCTGCGGCG
GGACCTCGGTCGGCTGCTATTGCCGGTGCTGTTGGCGGGATTACGGCAGC
TGTGGTAGTTGCTGGAAAGCAAGCTTTGAAACGATACATTCCTATATAA
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Coding sequence (CDS) from alignment at Ca4:5092097..5092645+

>Ca_03747_v1.0_kabuli ID=Ca_03747_v1.0_kabuli; Name=Ca_03747; organism=Cicer arietinum; type=CDS; length=549bp; location=Sequence derived from: Ca4:5092097..5092645+ (Cicer arietinum
ATGGCTGATTCTTCAACCATCCCAAACGACTCTAAAACACGTCCTTATCA
TCCCTACCAGCACCTCAACATTCCCATCGACAAACTCTACAACCTCCCCA
CCTCACCGGAGCATCTTTTCCACGAAGAAATCAGAAAGCGCCGTTCTTGG
GGCGACAATCTTCAATACTACACCGGCACCGGCTACCTCTCCGGCGCGAT
CATCGGAGGCACCAAGGGAACCATTGAAGGCATCAAGGCTGCCGAATCCG
GTGAATCTCTTAAGCTCCGGGTTAACCGAGTTCTTAATTCGGGTGGTCAG
GGAGGTAGAAGACTCGGTAACTCGCTTGGCGTGTTAGGTTTGATCTTTGC
GGGGTTGGAGAGTGCTATGATTCATGTTAGGGACACGGATGATTTTGTTA
ATAGTGCTGTCGCCGGACTTGGGACCGGAGCGCTTTACAAGGCTGCGGCG
GGACCTCGGTCGGCTGCTATTGCCGGTGCTGTTGGCGGGATTACGGCAGC
TGTGGTAGTTGCTGGAAAGCAAGCTTTGAAACGATACATTCCTATATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003397Tim17/Tim22/Tim23/PMP24