Ca_03750, Ca_03750_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03750 vs. TrEMBL
Match: I3S2R8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 1.066e-94 Identity = 160/208 (76.92%), Postives = 174/208 (83.65%), Query Frame = 1 Query: 1 MGSSKXXXXXXXXXXXXXPIAAKGDIVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSHAASSILGGTYHWMVMLLMSAGVVMWS 624 MGS K P+AAKGD DDVL KVCEEVECGKG+CVVN+SYPLNF+CEC SGWKRTQDEDDD+YATSFLPCVIPQCSLNYGCQPAPPPVPEK+ P N SAFDPCYWAYCGEG+C+KN+THTH CECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKV NST DV SH ASSI GG +HW+ +LL+S G+VMWS Sbjct: 1 MGSFKLLSLIAVVLMLLLPMAAKGDFFDDVLEKVCEEVECGKGNCVVNSSYPLNFVCECDSGWKRTQDEDDDIYATSFLPCVIPQCSLNYGCQPAPPPVPEKTLPRNISAFDPCYWAYCGEGQCTKNKTHTHRCECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVPNSTG----DVDSH-ASSIFGGRFHWITVLLISTGMVMWS 203
BLAST of Ca_03750 vs. TrEMBL
Match: C6T2H8_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 347.821 bits (891), Expect = 1.179e-93 Identity = 161/209 (77.03%), Postives = 175/209 (83.73%), Query Frame = 1 Query: 1 MGSSKXXXXXXXXXXXXXPIAAKGDIVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSH-AASSILGGTYHWMVMLLMSAGVVMWS 624 MGSSK P+AAKGD + D KVCEEVECGKGSCVVNTSYPLNF+CEC SGWKRTQD+DD+ YATSFLPCVIP+CSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEG C+KNRTHTH CEC PNYYNLLNISVFPCYSECTLGSDCSRLGIKVANS++ D GS +++SI G +HWMVMLLMS G+VMWS Sbjct: 1 MGSSKLLGIMAMLFIVLLPMAAKGDNITDFFDKVCEEVECGKGSCVVNTSYPLNFVCECDSGWKRTQDDDDE-YATSFLPCVIPECSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGTCTKNRTHTHRCECQPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSST----DSGSQDSSASIFTGRFHWMVMLLMSTGMVMWS 204
BLAST of Ca_03750 vs. TrEMBL
Match: I1NIP6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 2.081e-90 Identity = 158/207 (76.33%), Postives = 171/207 (82.61%), Query Frame = 1 Query: 1 MGSSKXXXXXXXXXXXXXPIAAKGDIVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSH-AASSILGGTYHWMVMLLMSAGVVM 618 MGSSK P+AAKGD + D L KVCEEVECGKGSCVVNTSYPLNF+CEC SGWKRTQD DDD YA SFLPCVIP+CSLNYGCQPAPPPVPEKSFPHNFSAFD CYWAYCGEG C+KNRTHTH CEC PNYYNLLNISVFPCYSECTLGSDCSRLGIKVANS++ D GS +++SI G +HW+VMLLMS G+VM Sbjct: 1 MGSSKLLGTMAMLFVVLLPMAAKGDNITDFLDKVCEEVECGKGSCVVNTSYPLNFVCECDSGWKRTQD-DDDKYAASFLPCVIPECSLNYGCQPAPPPVPEKSFPHNFSAFDTCYWAYCGEGTCTKNRTHTHRCECQPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSST----DSGSQDSSASIFTGKFHWIVMLLMSTGMVM 202
BLAST of Ca_03750 vs. TrEMBL
Match: M5W053_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011581mg PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 7.220e-59 Identity = 103/185 (55.68%), Postives = 129/185 (69.73%), Query Frame = 1 Query: 73 DIVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRT--HTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSHAASSILGGTYHWMVMLLMSAGVVMW 621 +I + +VC+EVECG+G+C + PL F CEC++GWKRT+D DDDL FLPCVIP C+L+Y CQPAPPPVP+K FP N SAFDPCYW YCGEG C +NRT HT ICEC + NLLN+S FPCY+ECTL DC LGI VA STS+ ++ A+S L G M M ++ G+++W Sbjct: 28 NIAPSIAAEVCKEVECGRGTCKFDVDDPLGFTCECEAGWKRTRDGDDDL---QFLPCVIPNCTLDYSCQPAPPPVPDKEFPRNLSAFDPCYWVYCGEGNCVRNRTYAHTPICECKSGFSNLLNVSAFPCYNECTLQPDCKSLGITVAKSTST-----DNNQATSFLPGKLQLMTMAMVYVGIILW 204
BLAST of Ca_03750 vs. TrEMBL
Match: D7TUL5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01890 PE=4 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 9.430e-59 Identity = 104/193 (53.89%), Postives = 135/193 (69.95%), Query Frame = 1 Query: 55 PIAAKGD----IVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSHAASSILGGTYHWMVMLLMSAGVVMW 621 P++A GD + L +C+EVECGKG+C + Y NFICEC SGWKRT+ +++D +LPCVIP C+L+Y C AP P P + PHN SAFDPCYW YCGEGKC+++ + + CECN Y NLLNISV+PCYSEC LGSDC +LGIKV+NSTSS+ GS S L G HW+ ++L+S G+++W Sbjct: 18 PLSAMGDDWSPALSPFLDNLCDEVECGKGTCKASLEYKFNFICECDSGWKRTRGDNED--GLKYLPCVIPNCTLDYSCMTAPSPAP--AVPHNESAFDPCYWMYCGEGKCTRSSAYGYKCECNSGYQNLLNISVYPCYSECALGSDCEKLGIKVSNSTSSSNSGDGS-GGGSFLPGKAHWVALVLISMGLLLW 205
BLAST of Ca_03750 vs. TrEMBL
Match: B9I5E4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571022 PE=4 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 2.744e-58 Identity = 105/189 (55.56%), Postives = 139/189 (73.54%), Query Frame = 1 Query: 55 PIAAKGDIVDDVLG---KVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYAT-SFLPCVIPQCSLNYG-CQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSS-TTVDVGSHAASSILGGTYHWMVMLLMS 603 P+ A DI ++ ++C+EV+CGKG+CV + SYPL++ CECQ+GWK+TQ +DDD+ FLPCVIP C+L YG CQPAPPPVP+K PHN S FDPCYW YCGEG+C+ N T+ H C CNP + NLLNIS +PCY CTLGSDC+ + I++ANSTS+ + G + AS+IL + WM++LL+S Sbjct: 18 PMVAMADIDGNLTAFYDRLCKEVDCGKGTCVGDKSYPLSYKCECQAGWKQTQYDDDDVDDEHKFLPCVIPNCTLKYGTCQPAPPPVPQKEAPHNSSFFDPCYWMYCGEGQCTNNGTYRHTCTCNPGFVNLLNISYYPCYGACTLGSDCADI-IRIANSTSTGSGTGTGGNPASTILPAKFQWMIILLVS 205
BLAST of Ca_03750 vs. TrEMBL
Match: B9REQ5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1427790 PE=4 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 3.471e-53 Identity = 95/178 (53.37%), Postives = 127/178 (71.35%), Query Frame = 1 Query: 88 VLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNY-GCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSHAASSILGGTYHWMVMLLMSAGVVM 618 +L +C EVECGKG+C + PL ++CEC+SGW R+ D D + FLPCV P+C+LNY GCQPAPP PEK+ P N S +DPCYW +CGEG C+KN T+ H+C C + NLL++ FPCYS CT+GSDC+ LGIKV+NS SS G++ ASSIL G + WM+++L+S +V+ Sbjct: 30 ILDAICNEVECGKGTCKGDILKPLGYVCECESGWARSPDADVN-DTLQFLPCVYPKCTLNYDGCQPAPPTPPEKTVPLNSSFYDPCYWMFCGEGTCTKNSTYNHLCTCKSGFSNLLDVPYFPCYSPCTIGSDCASLGIKVSNSESSP----GTNPASSILPGKFRWMIIVLVSILMVL 202
BLAST of Ca_03750 vs. TrEMBL
Match: M1BPN7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400019429 PE=4 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 2.938e-52 Identity = 95/200 (47.50%), Postives = 126/200 (63.00%), Query Frame = 1 Query: 58 IAAKGDIVDDVLG----KVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQ-DEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDV--------GSHAASSILGGTYHWMVMLLMSAGVVM 618 +AAK D + VL +C +VECGKG C P NFIC+C+ GWKRT+ D+DDD FLPC++P+CSL+Y C PAPPP P PHN S FDPCYW YCGEG C KN TH C+C Y NLL+I FPC+++C +GSDC +LGI+++NST+S+ + + A+S + HWM + L SA + + Sbjct: 21 LAAKEDSIPPVLAPYFDNICNDVECGKGRCEKAPGKPFNFICKCERGWKRTRHDDDDDEDDLEFLPCIVPKCSLDYSCLPAPPPAPP--IPHNMSFFDPCYWIYCGEGTCKKNITHGQTCQCKSGYSNLLDIPAFPCFNDCAIGSDCQKLGIRLSNSTASSPSSIFNTNSGGNDKNGATSFMLKNSHWMAIFLASAAMAL 218
BLAST of Ca_03750 vs. TrEMBL
Match: K4B0D4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g097470.2 PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.234e-50 Identity = 97/208 (46.63%), Postives = 127/208 (61.06%), Query Frame = 1 Query: 58 IAAKGDIVDDVLG----KVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQ----DEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANST-----SSTTVDV--------GSHAASSILGGTYHWMVMLLMSAGVVM 618 +AAK D + L +C +VECGKG C P NFIC+C+ GWKRT D+DDD FLPC++P+CSL+Y C PAPPP P S PHN S FDPCYW YCGEG C+KN TH C+C Y NLL+ FPC+++C +GSDC +LGI+++NST SST + ++ A+SI+ HWM + L SA + + Sbjct: 21 LAAKEDGIPPSLAPYFDNICNDVECGKGRCEKAPGKPFNFICKCERGWKRTHHHHDDDDDDEDDLKFLPCIVPKCSLDYSCLPAPPPAP--SIPHNMSFFDPCYWIYCGEGTCTKNITHGQTCQCKSGYSNLLDFPAFPCFNDCAIGSDCQKLGIRLSNSTASSPSSSTPSSIFNTNRGGNDNNGATSIMLKNSHWMAIFLASAAMAL 226
BLAST of Ca_03750 vs. TrEMBL
Match: D7T731_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04010 PE=4 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.081e-46 Identity = 86/185 (46.49%), Postives = 115/185 (62.16%), Query Frame = 1 Query: 76 IVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTT---VDVGSHAASSILGGTYHWMVMLLMSAGVVMW 621 ++ + +VC+EVECGKG+C + PL F CEC GW +T+ DD FLPCVIP C+L+Y C+ AP PV EK N S FDPC W CG G C+K TH CEC YYNLLNI+ FPC EC++G DC LGI +N ++S+T D G + A +IL G ++ ++ ++S +VMW Sbjct: 29 LLSPIFDEVCKEVECGKGTCKPSNDSPLYFACECNPGWMQTRPAHDD--HLKFLPCVIPNCTLDYSCKEAPSPVQEKENRANLSLFDPCRWTDCGGGSCNKTSKFTHTCECREGYYNLLNITTFPCLRECSIGLDCLNLGITSSNKSTSSTPSMADNGKNQAKTILQGNFYLWIIFMLSWAMVMW 211 The following BLAST results are available for this feature:
BLAST of Ca_03750 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of Ca_03750 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03750_v1.0_kabuli ID=Ca_03750_v1.0_kabuli; Name=Ca_03750; organism=Cicer arietinum; type=mRNA; length=627bpback to top protein sequence of Ca_03750_v1.0_kabuli >Ca_03750_v1.0_kabuli ID=Ca_03750_v1.0_kabuli; Name=Ca_03750_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=208bpback to top mRNA from alignment at Ca4:5050176..5051697- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03750_v1.0_kabuli ID=Ca_03750_v1.0_kabuli; Name=Ca_03750; organism=Cicer arietinum; type=mRNA; length=1522bp; location=Sequence derived from: Ca4:5050176..5051697- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:5050176..5051697- >Ca_03750_v1.0_kabuli ID=Ca_03750_v1.0_kabuli; Name=Ca_03750; organism=Cicer arietinum; type=CDS; length=627bp; location=Sequence derived from: Ca4:5050176..5051697- (Cicer arietinumback to top |