Ca_03750, Ca_03750_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_03750
Unique NameCa_03750_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length627
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:5050176..5051697 -Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
InterProScan analysis for kabuli C. arietinum unigenes2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Expression: Chickpea drought stress response 2023-09-13
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR253Pisum sativum Cameor genome v1aPisum sativum
capsR277Pisum sativum Cameor genome v1aPisum sativum
capsR300Pisum sativum Cameor genome v1aPisum sativum
cavuR298Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR318Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR360Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR385Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0475Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0507Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0697Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0827Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1121Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL277Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR247Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR279Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR289Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR309Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR286Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR345Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR353Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR307Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR349Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR355Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR262Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR332Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR380Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR394Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR280Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR282Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR125Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL136Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL377Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR278Cicer arietinum
cacarR286Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat6g146560.1Pisum sativum Cameor genome v1aPisum sativum
jg3127.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat06G0395600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
evm.model.Chr07.1280Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014657642.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.007G186900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Tiffany.R1.3g068720.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.3g082520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va02G053380.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_15542Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun07g154700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_007141Cajanus cajan Asha genome v1.0Cajanus cajan
LR48_mrnaVigan10g097300Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004495738.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_03750-CDS1Ca_03750-CDS1Cicer arietinumCDS
Ca_03750-CDS2Ca_03750-CDS2Cicer arietinumCDS
Ca_03750-CDS3Ca_03750-CDS3Cicer arietinumCDS
Ca_03750-CDS4Ca_03750-CDS4Cicer arietinumCDS
Ca_03750-CDS5Ca_03750-CDS5Cicer arietinumCDS
Ca_03750-CDS6Ca_03750-CDS6Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_03750_v1.0_kabuliCa_03750_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_03750 vs. TrEMBL
Match: I3S2R8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 1.066e-94
Identity = 160/208 (76.92%), Postives = 174/208 (83.65%), Query Frame = 1
Query:    1 MGSSKXXXXXXXXXXXXXPIAAKGDIVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSHAASSILGGTYHWMVMLLMSAGVVMWS 624
            MGS K             P+AAKGD  DDVL KVCEEVECGKG+CVVN+SYPLNF+CEC SGWKRTQDEDDD+YATSFLPCVIPQCSLNYGCQPAPPPVPEK+ P N SAFDPCYWAYCGEG+C+KN+THTH CECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKV NST     DV SH ASSI GG +HW+ +LL+S G+VMWS
Sbjct:    1 MGSFKLLSLIAVVLMLLLPMAAKGDFFDDVLEKVCEEVECGKGNCVVNSSYPLNFVCECDSGWKRTQDEDDDIYATSFLPCVIPQCSLNYGCQPAPPPVPEKTLPRNISAFDPCYWAYCGEGQCTKNKTHTHRCECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVPNSTG----DVDSH-ASSIFGGRFHWITVLLISTGMVMWS 203          
BLAST of Ca_03750 vs. TrEMBL
Match: C6T2H8_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 1.179e-93
Identity = 161/209 (77.03%), Postives = 175/209 (83.73%), Query Frame = 1
Query:    1 MGSSKXXXXXXXXXXXXXPIAAKGDIVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSH-AASSILGGTYHWMVMLLMSAGVVMWS 624
            MGSSK             P+AAKGD + D   KVCEEVECGKGSCVVNTSYPLNF+CEC SGWKRTQD+DD+ YATSFLPCVIP+CSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEG C+KNRTHTH CEC PNYYNLLNISVFPCYSECTLGSDCSRLGIKVANS++    D GS  +++SI  G +HWMVMLLMS G+VMWS
Sbjct:    1 MGSSKLLGIMAMLFIVLLPMAAKGDNITDFFDKVCEEVECGKGSCVVNTSYPLNFVCECDSGWKRTQDDDDE-YATSFLPCVIPECSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGTCTKNRTHTHRCECQPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSST----DSGSQDSSASIFTGRFHWMVMLLMSTGMVMWS 204          
BLAST of Ca_03750 vs. TrEMBL
Match: I1NIP6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 2.081e-90
Identity = 158/207 (76.33%), Postives = 171/207 (82.61%), Query Frame = 1
Query:    1 MGSSKXXXXXXXXXXXXXPIAAKGDIVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSH-AASSILGGTYHWMVMLLMSAGVVM 618
            MGSSK             P+AAKGD + D L KVCEEVECGKGSCVVNTSYPLNF+CEC SGWKRTQD DDD YA SFLPCVIP+CSLNYGCQPAPPPVPEKSFPHNFSAFD CYWAYCGEG C+KNRTHTH CEC PNYYNLLNISVFPCYSECTLGSDCSRLGIKVANS++    D GS  +++SI  G +HW+VMLLMS G+VM
Sbjct:    1 MGSSKLLGTMAMLFVVLLPMAAKGDNITDFLDKVCEEVECGKGSCVVNTSYPLNFVCECDSGWKRTQD-DDDKYAASFLPCVIPECSLNYGCQPAPPPVPEKSFPHNFSAFDTCYWAYCGEGTCTKNRTHTHRCECQPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSST----DSGSQDSSASIFTGKFHWIVMLLMSTGMVM 202          
BLAST of Ca_03750 vs. TrEMBL
Match: M5W053_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011581mg PE=4 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 7.220e-59
Identity = 103/185 (55.68%), Postives = 129/185 (69.73%), Query Frame = 1
Query:   73 DIVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRT--HTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSHAASSILGGTYHWMVMLLMSAGVVMW 621
            +I   +  +VC+EVECG+G+C  +   PL F CEC++GWKRT+D DDDL    FLPCVIP C+L+Y CQPAPPPVP+K FP N SAFDPCYW YCGEG C +NRT  HT ICEC   + NLLN+S FPCY+ECTL  DC  LGI VA STS+      ++ A+S L G    M M ++  G+++W
Sbjct:   28 NIAPSIAAEVCKEVECGRGTCKFDVDDPLGFTCECEAGWKRTRDGDDDL---QFLPCVIPNCTLDYSCQPAPPPVPDKEFPRNLSAFDPCYWVYCGEGNCVRNRTYAHTPICECKSGFSNLLNVSAFPCYNECTLQPDCKSLGITVAKSTST-----DNNQATSFLPGKLQLMTMAMVYVGIILW 204          
BLAST of Ca_03750 vs. TrEMBL
Match: D7TUL5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01890 PE=4 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 9.430e-59
Identity = 104/193 (53.89%), Postives = 135/193 (69.95%), Query Frame = 1
Query:   55 PIAAKGD----IVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSHAASSILGGTYHWMVMLLMSAGVVMW 621
            P++A GD     +   L  +C+EVECGKG+C  +  Y  NFICEC SGWKRT+ +++D     +LPCVIP C+L+Y C  AP P P  + PHN SAFDPCYW YCGEGKC+++  + + CECN  Y NLLNISV+PCYSEC LGSDC +LGIKV+NSTSS+    GS    S L G  HW+ ++L+S G+++W
Sbjct:   18 PLSAMGDDWSPALSPFLDNLCDEVECGKGTCKASLEYKFNFICECDSGWKRTRGDNED--GLKYLPCVIPNCTLDYSCMTAPSPAP--AVPHNESAFDPCYWMYCGEGKCTRSSAYGYKCECNSGYQNLLNISVYPCYSECALGSDCEKLGIKVSNSTSSSNSGDGS-GGGSFLPGKAHWVALVLISMGLLLW 205          
BLAST of Ca_03750 vs. TrEMBL
Match: B9I5E4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571022 PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 2.744e-58
Identity = 105/189 (55.56%), Postives = 139/189 (73.54%), Query Frame = 1
Query:   55 PIAAKGDIVDDVLG---KVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYAT-SFLPCVIPQCSLNYG-CQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSS-TTVDVGSHAASSILGGTYHWMVMLLMS 603
            P+ A  DI  ++     ++C+EV+CGKG+CV + SYPL++ CECQ+GWK+TQ +DDD+     FLPCVIP C+L YG CQPAPPPVP+K  PHN S FDPCYW YCGEG+C+ N T+ H C CNP + NLLNIS +PCY  CTLGSDC+ + I++ANSTS+ +    G + AS+IL   + WM++LL+S
Sbjct:   18 PMVAMADIDGNLTAFYDRLCKEVDCGKGTCVGDKSYPLSYKCECQAGWKQTQYDDDDVDDEHKFLPCVIPNCTLKYGTCQPAPPPVPQKEAPHNSSFFDPCYWMYCGEGQCTNNGTYRHTCTCNPGFVNLLNISYYPCYGACTLGSDCADI-IRIANSTSTGSGTGTGGNPASTILPAKFQWMIILLVS 205          
BLAST of Ca_03750 vs. TrEMBL
Match: B9REQ5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1427790 PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 3.471e-53
Identity = 95/178 (53.37%), Postives = 127/178 (71.35%), Query Frame = 1
Query:   88 VLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNY-GCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDVGSHAASSILGGTYHWMVMLLMSAGVVM 618
            +L  +C EVECGKG+C  +   PL ++CEC+SGW R+ D D +     FLPCV P+C+LNY GCQPAPP  PEK+ P N S +DPCYW +CGEG C+KN T+ H+C C   + NLL++  FPCYS CT+GSDC+ LGIKV+NS SS     G++ ASSIL G + WM+++L+S  +V+
Sbjct:   30 ILDAICNEVECGKGTCKGDILKPLGYVCECESGWARSPDADVN-DTLQFLPCVYPKCTLNYDGCQPAPPTPPEKTVPLNSSFYDPCYWMFCGEGTCTKNSTYNHLCTCKSGFSNLLDVPYFPCYSPCTIGSDCASLGIKVSNSESSP----GTNPASSILPGKFRWMIIVLVSILMVL 202          
BLAST of Ca_03750 vs. TrEMBL
Match: M1BPN7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400019429 PE=4 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 2.938e-52
Identity = 95/200 (47.50%), Postives = 126/200 (63.00%), Query Frame = 1
Query:   58 IAAKGDIVDDVLG----KVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQ-DEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTTVDV--------GSHAASSILGGTYHWMVMLLMSAGVVM 618
            +AAK D +  VL      +C +VECGKG C      P NFIC+C+ GWKRT+ D+DDD     FLPC++P+CSL+Y C PAPPP P    PHN S FDPCYW YCGEG C KN TH   C+C   Y NLL+I  FPC+++C +GSDC +LGI+++NST+S+   +          + A+S +    HWM + L SA + +
Sbjct:   21 LAAKEDSIPPVLAPYFDNICNDVECGKGRCEKAPGKPFNFICKCERGWKRTRHDDDDDEDDLEFLPCIVPKCSLDYSCLPAPPPAPP--IPHNMSFFDPCYWIYCGEGTCKKNITHGQTCQCKSGYSNLLDIPAFPCFNDCAIGSDCQKLGIRLSNSTASSPSSIFNTNSGGNDKNGATSFMLKNSHWMAIFLASAAMAL 218          
BLAST of Ca_03750 vs. TrEMBL
Match: K4B0D4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g097470.2 PE=4 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.234e-50
Identity = 97/208 (46.63%), Postives = 127/208 (61.06%), Query Frame = 1
Query:   58 IAAKGDIVDDVLG----KVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQ----DEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANST-----SSTTVDV--------GSHAASSILGGTYHWMVMLLMSAGVVM 618
            +AAK D +   L      +C +VECGKG C      P NFIC+C+ GWKRT     D+DDD     FLPC++P+CSL+Y C PAPPP P  S PHN S FDPCYW YCGEG C+KN TH   C+C   Y NLL+   FPC+++C +GSDC +LGI+++NST     SST   +         ++ A+SI+    HWM + L SA + +
Sbjct:   21 LAAKEDGIPPSLAPYFDNICNDVECGKGRCEKAPGKPFNFICKCERGWKRTHHHHDDDDDDEDDLKFLPCIVPKCSLDYSCLPAPPPAP--SIPHNMSFFDPCYWIYCGEGTCTKNITHGQTCQCKSGYSNLLDFPAFPCFNDCAIGSDCQKLGIRLSNSTASSPSSSTPSSIFNTNRGGNDNNGATSIMLKNSHWMAIFLASAAMAL 226          
BLAST of Ca_03750 vs. TrEMBL
Match: D7T731_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04010 PE=4 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.081e-46
Identity = 86/185 (46.49%), Postives = 115/185 (62.16%), Query Frame = 1
Query:   76 IVDDVLGKVCEEVECGKGSCVVNTSYPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVPEKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSTSSTT---VDVGSHAASSILGGTYHWMVMLLMSAGVVMW 621
            ++  +  +VC+EVECGKG+C  +   PL F CEC  GW +T+   DD     FLPCVIP C+L+Y C+ AP PV EK    N S FDPC W  CG G C+K    TH CEC   YYNLLNI+ FPC  EC++G DC  LGI  +N ++S+T    D G + A +IL G ++  ++ ++S  +VMW
Sbjct:   29 LLSPIFDEVCKEVECGKGTCKPSNDSPLYFACECNPGWMQTRPAHDD--HLKFLPCVIPNCTLDYSCKEAPSPVQEKENRANLSLFDPCRWTDCGGGSCNKTSKFTHTCECREGYYNLLNITTFPCLRECSIGLDCLNLGITSSNKSTSSTPSMADNGKNQAKTILQGNFYLWIIFMLSWAMVMW 211          
The following BLAST results are available for this feature:
BLAST of Ca_03750 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
I3S2R8_MEDTR1.066e-9476.92Uncharacterized protein OS=Medicago truncatula PE=... [more]
C6T2H8_SOYBN1.179e-9377.03Uncharacterized protein OS=Glycine max PE=2 SV=1[more]
I1NIP6_SOYBN2.081e-9076.33Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
M5W053_PRUPE7.220e-5955.68Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
D7TUL5_VITVI9.430e-5953.89Putative uncharacterized protein OS=Vitis vinifera... [more]
B9I5E4_POPTR2.744e-5855.56Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9REQ5_RICCO3.471e-5353.37Putative uncharacterized protein OS=Ricinus commun... [more]
M1BPN7_SOLTU2.938e-5247.50Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
K4B0D4_SOLLC1.234e-5046.63Uncharacterized protein OS=Solanum lycopersicum GN... [more]
D7T731_VITVI1.081e-4646.49Putative uncharacterized protein OS=Vitis vinifera... [more]

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BLAST of Ca_03750 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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Expression

Available Analyses

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Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 6..18
score
NoneNo IPR availableSEGsegsegcoord: 51..62
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_03750_v1.0_kabuli ID=Ca_03750_v1.0_kabuli; Name=Ca_03750; organism=Cicer arietinum; type=mRNA; length=627bp
ATGGGTTCCTCCAAGTTGTTGGGCCTTATAGCCACACTTCTCTTGGTACT
TTTGCCCATAGCTGCCAAAGGGGATATTGTTGATGATGTCCTTGGAAAAG
TTTGTGAAGAAGTAGAATGTGGGAAAGGAAGCTGCGTGGTGAATACAAGT
TACCCTTTGAACTTCATCTGTGAATGCCAATCTGGATGGAAACGAACCCA
AGATGAGGATGATGATTTATATGCCACTAGCTTTCTTCCATGTGTCATTC
CCCAATGTAGCCTGAATTATGGTTGTCAGCCAGCACCTCCTCCAGTTCCA
GAGAAGAGTTTCCCTCACAACTTTTCAGCTTTTGATCCTTGCTATTGGGC
ATACTGTGGAGAAGGTAAATGCAGCAAGAACAGGACACATACACACATAT
GTGAATGCAACCCCAATTATTATAATCTTCTCAATATCTCTGTTTTCCCT
TGTTACAGTGAATGTACTCTTGGATCTGATTGTTCAAGACTTGGAATTAA
AGTTGCAAATTCAACCTCATCCACAACCGTAGATGTTGGCAGTCATGCAG
CAAGCTCAATCTTAGGAGGAACGTACCATTGGATGGTTATGTTGCTGATG
TCGGCGGGAGTGGTGATGTGGAGCTAG
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protein sequence of Ca_03750_v1.0_kabuli

>Ca_03750_v1.0_kabuli ID=Ca_03750_v1.0_kabuli; Name=Ca_03750_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=208bp
MGSSKLLGLIATLLLVLLPIAAKGDIVDDVLGKVCEEVECGKGSCVVNTS
YPLNFICECQSGWKRTQDEDDDLYATSFLPCVIPQCSLNYGCQPAPPPVP
EKSFPHNFSAFDPCYWAYCGEGKCSKNRTHTHICECNPNYYNLLNISVFP
CYSECTLGSDCSRLGIKVANSTSSTTVDVGSHAASSILGGTYHWMVMLLM
SAGVVMWS
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mRNA from alignment at Ca4:5050176..5051697-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_03750_v1.0_kabuli ID=Ca_03750_v1.0_kabuli; Name=Ca_03750; organism=Cicer arietinum; type=mRNA; length=1522bp; location=Sequence derived from: Ca4:5050176..5051697- (Cicer arietinum
ATGGGTTCCTCCAAGTTGTTGGGCCTTATAGCCACACTTCTCTTGGTACT TTTGCCCATAGCTGCCAAAGGGGATATTGTTGATGATGTCCTTGGTACGT ACTCATTTTTATGGAGAAAAAAAATTCATTAACATCTTATAACTGATTAG TGCATGTATAATAGTATGTATATATATTTATTGTAGGAAAAGTTTGTGAA GAAGTAGAATGTGGGAAAGGAAGCTGCGTGGTGAATACAAGTTACCCTTT GAACTTCATCTGTGAATGCCAATCTGGATGGAAACGAACCCAAGATGAGG ATGATGATTTATATGCCACTAGCTTTCTTCCATGTGTCATTCCCCAATGT ATGTTTAGAGACAAAAATCTATTTGGTTGAATGTAGAATATCAAGCTTTG CCACTCAAATAATCTAAATTAATTATCTTGCAGGTAGCCTGAATTATGGT TGTCAGCCAGCACCTCCTCCAGTTCCAGAGAAGAGTTTCCCTCACAACTT TTCAGCTTTTGATCGTAAGTAACAATACTCATTACTCAATGTGTTGATCA TTCATATATGCTTGTTTAAATTTGATTATCAATTCAATTATGCATTAAAT TATACTTTCTTATTTATTGATAGAGAAATTTACAATGATATTGTTTTTTG TAGCTTGCTATTGGGCATACTGTGGAGAAGGTAAATGCAGCAAGAACAGG ACACATACACACATATGTGAATGCAACCCCAATTATTATAATCTTCTCAA TATCTCTGTTTTCCCTTGTTACAGTGAATGTAAGCATCCTTAATTAAATT AAACCCTTATTTATAACATAATGTTAGAGAAAGAAATATATTGATCAAAT ATGATTTCATTTCTTGAAGGTACTCTTGGATCTGATTGTTCAAGACTTGG AATTAAAGTTGCAAATTCAACCTCATCCACAACCGTAGATGTTGGCAGTC ATGGTGAGACTGGACTCTGCACCTATTTTTTCTCTACTAATCTTACACTA TTTTTTATTTATGAAATTGAGCAATATATATATATATATAGTTTCTAAAA TCTAAAATTTGAAAGTAATTTGTGAACTTGAAAGTTCTTCACCATAATAA TTTTTTCCCTTTTGTCAATTTAGTATCCGAAATTTATTTTAAACAGGCAC ACGGTTTTAGATTGCAAGTGTAATATTGCGAATTTTAAAGTCCCTGCAAC GATATTGAAATCGTAATTGTAGTCGCATCAACCTCATTTGCTCGTAATAT AAAAGTTTGCAGCATAACTGCAACACCAATTTTTAATGGATAAAATCATC TCACCTTACAATTTAAAAAACTAATTGATGATTCAATCAATTATATGAAA TTATCAATGAATTATCTTAGAACTGCAACTATGAAATAATAATTGTTATG TTAATATTTAAATTGATGGTGTGTATGTATTGTATTACCCAGCAGCAAGC TCAATCTTAGGAGGAACGTACCATTGGATGGTTATGTTGCTGATGTCGGC GGGAGTGGTGATGTGGAGCTAG
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Coding sequence (CDS) from alignment at Ca4:5050176..5051697-

>Ca_03750_v1.0_kabuli ID=Ca_03750_v1.0_kabuli; Name=Ca_03750; organism=Cicer arietinum; type=CDS; length=627bp; location=Sequence derived from: Ca4:5050176..5051697- (Cicer arietinum
ATGGGTTCCTCCAAGTTGTTGGGCCTTATAGCCACACTTCTCTTGGTACT
TTTGCCCATAGCTGCCAAAGGGGATATTGTTGATGATGTCCTTGGAAAAG
TTTGTGAAGAAGTAGAATGTGGGAAAGGAAGCTGCGTGGTGAATACAAGT
TACCCTTTGAACTTCATCTGTGAATGCCAATCTGGATGGAAACGAACCCA
AGATGAGGATGATGATTTATATGCCACTAGCTTTCTTCCATGTGTCATTC
CCCAATGTAGCCTGAATTATGGTTGTCAGCCAGCACCTCCTCCAGTTCCA
GAGAAGAGTTTCCCTCACAACTTTTCAGCTTTTGATCCTTGCTATTGGGC
ATACTGTGGAGAAGGTAAATGCAGCAAGAACAGGACACATACACACATAT
GTGAATGCAACCCCAATTATTATAATCTTCTCAATATCTCTGTTTTCCCT
TGTTACAGTGAATGTACTCTTGGATCTGATTGTTCAAGACTTGGAATTAA
AGTTGCAAATTCAACCTCATCCACAACCGTAGATGTTGGCAGTCATGCAG
CAAGCTCAATCTTAGGAGGAACGTACCATTGGATGGTTATGTTGCTGATG
TCGGCGGGAGTGGTGATGTGGAGCTAG
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