Ca_09063.1, Ca_09063.1_ICC4958_v2 (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_09063.1 vs. DB:Swiss
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1) HSP 1 Score: 587.03 bits (1512), Expect = 0.000e+0 Identity = 286/468 (61.11%), Postives = 361/468 (77.14%), Query Frame = 1 Query: 97 DTLGRRLLSLVYPKRSAVIAINKWKEEGHVLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVHLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLADKAEAIMLKMSECGFLQSPIPYNRMMSLYISNGKLEKVPKLFEELKMNTSPDIVTFNLLLTACASVNDVETAERVLLELKKAKVDPDWVTFSTLTNLYIRNASIKDDCLEKAASTLKEMEKRTCRKTRVAYSSLLSLHTNMGNVDEVNRIWNKMKGCFRKMNDEEYICMISSLLKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDRGLMEMAEIFCNQLEQKGVSLSYTTWEVFTMGYLKKKDVNKFLYYFRKAISSVKKWIPNDMLVQEAFTVIQEQSHIEGAEQLLAILRDAGHVNTNVYNLFLKTYAAAGKMPLIVTERMKKDNVQLDEETHRLLDLTSKM 1500 DTLG RLLSLVY KRSAV+ I KWKEEGH + RKY+LNR++RELRK KRYKHALE+CEWM +Q DIKL GDYAVHLDLI+K+RGLNSAEKFFED+PD+MRG CT+LLH+YVQN L+DKAEA+ KM ECGFL+S +PYN M+S+YIS G+ EKVP L +ELK+ TSPDIVT+NL LTA AS NDVE AE+V L+ K+ K++PDWVT+S LTNLY K D +EKA LKEMEK +K RVAY+SL+SLH N+G+ D VN W K+K F+KMND EY+ MIS+++KLG+F + LY EWESVSGT D R+ NL+L Y++R + + E F ++ +KG++ SY+TWE+ T YLK+KD+ K L F KAI SVKKW N LV+ A ++EQ +++GAE+L+ +L+ AG+VNT +YN L+TYA AG+M LIV ERM KDNV+LDEET L+ LTS+M Sbjct: 61 DTLGGRLLSLVYTKRSAVVTIRKWKEEGHSV-RKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLY-----AKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQM 522
BLAST of Ca_09063.1 vs. DB:Swiss
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 7.463e-83 Identity = 152/446 (34.08%), Postives = 257/446 (57.62%), Query Frame = 1 Query: 181 HVLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVHLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLADKAEAIMLKMSECGFLQSPIPYNRMMSLYISNGKLEKVPKLFEELKM-NTSPDIVTFNLLLTACASVNDVETAERVLLELKK-AKVDPDWVTFSTLTNLYIRNASIKDDCLEKAASTLKEMEKRTCRKTRVAYSSLLSLHTNMGNVDEVNRIWNKMKGCFRKMNDEEYICMISSLLKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDRGLMEMAEIFCNQLEQKGVSLSYTTWEVFTMGYLKKKDVNKFLYYFRKAISSVK----KWIPNDMLVQEAFTVIQEQSHIEGAEQLLAILRDA-GHVNTNVYNLFLKTYAAAGKMPLIVTERMKKDNVQLDEETHRLLDLTSK 1497 HV K+++ I++LR Y AL++ E M+ + K V D A+HLDL+ K R + + E +F DLP+ + + T +LL+ Y + L +KAE ++ KM E S + YN +M+LY G+ EKVP + +ELK N PD T+N+ + A A+ ND+ ERV+ E+ + +V PDW T+S + ++Y+ +A + +KA L+E+E + ++ AY L++L+ +G + EV RIW ++ K ++ Y+ MI L+KL D G E L+KEW++ T D+R+ N+L+ +Y GL++ A + ++G L+ TWE+F Y+K D+ + L KA+S K KW+P+ V+ + +++ + GAE LL IL++ ++ ++ ++TYAAAGK + R+K +NV+++E T +LLD S+ Sbjct: 52 HVF--KWEVGDTIKKLRNRGLYYPALKLSEVMEERGMNKTV-SDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYV-DAGLS----QKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLDEVSQ 489
BLAST of Ca_09063.1 vs. DB:Swiss
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2) HSP 1 Score: 256.529 bits (654), Expect = 3.824e-77 Identity = 141/419 (33.65%), Postives = 241/419 (57.52%), Query Frame = 1 Query: 133 PKRSAVIAINKWKEEGHVLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQND-IKLVEGDYAVHLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLADKAEAIMLKMSECGFLQSPIPYNRMMSLYISNGKLEKVPKLFEELKM-NTSPDIVTFNLLLTACASVNDVETAERVLLELKK-AKVDPDWVTFSTLTNLYIRNASIKDDCLEKAASTLKEMEKRTCRKTRVAYSSLLSLHTNMGNVDEVNRIWNKMKGCFRKMNDEEYICMISSLLKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDRGLMEMAEIFCNQLEQKGVSLSYTTWEVFTMGYLKKKDVNKFLYYFRKAISS--VKKWIPNDMLVQEAFTVIQEQSHIEGAEQLLAILRDAGHVNTNVY 1374 P+ A +N+W++ G L K++L R+++ELRK KR ALEV +WM + + +L D A+ LDLI KVRG+ AE+FF LP+ + + +LL+AYV+ +KAEA++ M + G+ P+P+N MM+LY++ + +KV + E+K + DI ++N+ L++C S+ VE E V ++K + P+W TFST+ +YI+ EKA L+++E R + R+ Y LLSL+ ++GN E+ R+W+ K + + Y ++SSL+++GD G E +Y+EW V + D R+ NLL+ +YV +E AE + + + G S +TWE+ +G+ +K+ +++ L R A S+ W P +++ F + +E+S + E +L +LR +G + Y Sbjct: 79 PELGAASVLNQWEKAGRKLT-KWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGET-----EKAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSY 491
BLAST of Ca_09063.1 vs. DB:Swiss
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 4.364e-71 Identity = 152/444 (34.23%), Postives = 240/444 (54.05%), Query Frame = 1 Query: 97 DTLGRRLLSLVYPKRSAVIAINKWKEEGHVLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVHLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLADKAEAIMLKMSECGFLQSPIPYNRMMSLYISNGKLEKVPKLFEELKMNT-SPDIVTFNLLLTACASVNDVETAERVLLELKKAK-VDPDWVTFSTLTNLYIRNASIKDDCLEKAASTLKEMEKRT-CRKTRVAYSSLLSLHTNMGNVDEVNRIWN---KMKGCFRKMNDEEYICMISSLLKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDRGLMEMAEIFCNQLEQKGVSLSYTTWEVFTMGYLKKKDVNKFLYYFRKAISSVK-KWIPNDMLVQEAFTVIQEQSHIEGAEQLLAILRDAGHVNTNVYNLFLKTYAAAG 1407 DTL RR+ P S + ++ W ++G+ L + +L+ +I+ LRK R+ HAL++ +WM ++ EGD A+ LDLI KV GL AEKFFE +P + R ALL+ Y + KAE + +M E GFL+ +PYN M++LY+ GK V KL E++ T PDI T N L A + V+DVE E+ L+ + + + DW T++ N Y IK EKA L++ E+ +K + AY L+S + G +EV R+W+ ++ G + + YI +IS+LLK+ D VE + +EWE+ D+R+ +LL+T Y +G+ME AE N L QK +TWE +GY + K + +++AI K W P+ +++ ++ Q +EG ++L +L + GH++ Y+ L AG Sbjct: 38 DTLQRRVARSGDPSASIIKVLDGWLDQGN-LVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGY-----IKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFY----NTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS---YDQLLYDMNGAG 468
BLAST of Ca_09063.1 vs. DB:Swiss
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 3.706e-65 Identity = 145/448 (32.37%), Postives = 238/448 (53.12%), Query Frame = 1 Query: 133 PKRSAVIAINKWKEEGHVLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVHLDLITKVRGLNSAEKFFEDLPDK---MR-GQPTCTALLHAYVQNNLADKAEAIMLKMSECGFLQSPIPYNRMMSLYISNGKLEKVPKLFEELKMNTSP-DIVTFNLLLTACASVNDVETAERVLLELKKAK-VDPDWVTFSTLTNLYIRNASIKDDCLEKAASTLKEMEKRTCRKTRVAYSSLLSLHTNMGNVDEVNRIWNKMKGCFRKMNDEEYICMISSLLKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDRGLMEMAEIFCNQLEQKGVSLSYTTWEVFTMGYLKKKDVNKFLYYFRKAISSVKK--WIPNDMLVQEAFTVIQEQSHIEGAEQLLAILRDAGHVNTNVYNLFLKTYAAAGKMPLIVTERMKKDNV 1452 P+RS + + + GH + +L + + L ++ RY AL++ EWM+ Q DI+ D A+ LDLI K GL E++FE L MR + LL AYV+N + +AEA+M K++ GFL +P P+N MM LY ++G+ EKV + +K N P +++++NL + AC V+ V E V E+ K V+ W + TL N+YI K EKA L++ EK R R+ Y L++L+ ++GN + V R+W K +++ YIC++SSL+K GD E ++ EWE+ DVRVSN+LL +YV G + AE + ++G + +Y TWE+ G++K +++ K + + +++ W P+ +V +++ IE A + L G + +Y L L+ + A + + E MK D + Sbjct: 50 PRRSVTSLLQERIDSGHAVSLS-ELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYI-----KSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491
BLAST of Ca_09063.1 vs. DB:Swiss
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.920e-64 Identity = 138/471 (29.30%), Postives = 242/471 (51.38%), Query Frame = 1 Query: 100 TLGRRLLSLVYPKRSAVIAINKWKEEGHVLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVHLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLADKAEAIMLKMSECGFLQSPIPYNRMMSLYISNGKLEKVPKLFEELK-MNTSPDIVTFNLLLTACASVNDVETAERVLLEL-KKAKVDPDWVTFSTLTNLYIRNASIKDDCLEKAASTLKEMEKRTCRKTRVAYSSLLSLHTNMGNVDEVNRIWNKMKGCFRKMNDEEYICMISSLLKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDRGLMEMAEIFCNQLEQKGVSLSYTTWEVFTMGYLKKKDVNKFLYYFRKAIS---SVKKWIPNDMLVQEAFTVIQEQSHIEGAEQLLAILRDAGHVNTNVYNLFLKT-YAAAGKMPLIVTERMKKDNVQLDEETHRLLDLTS 1494 TL ++ L PK S + W + G + +L R++ +LR+ KR+ HALEV +WM ++AVHLDLI +V G +AE++FE+L ++ + T ALL+ YV+ +K+ KM E GF+ S + YN +M LY + G+ EKVPK+ EE+K N +PD ++ + + A ++ D+E L ++ ++ + DW T++ YI DC ++A LK E R +K Y+ L++L+ +G EV R+W+ K ++ +++Y+ ++ SL+K+ E + EW+S D RV N ++ Y+ + + E AE L ++G + + +WE+ Y +K + + A+ +KW P LV + + ++ ++ E +A LR+ VN +Y+ +K G+ + +RMK D +++DEET +L S Sbjct: 26 TLYSKISPLGDPKSSVYPELQNWVQCGKKVSVA-ELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGG----DC-DRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILSTRS 490
BLAST of Ca_09063.1 vs. DB:Swiss
Match: PP300_ARATH (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01990 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 7.944e-63 Identity = 137/445 (30.79%), Postives = 239/445 (53.71%), Query Frame = 1 Query: 157 INKWKEEGHVLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVHLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLADKAEAIMLKMSECGFLQSPIPYNRMMSLYISNGKLEKVPKLFEELKMNT-SPDIVTFNLLLTACASVNDVETAERVLLELK-KAKVDPDWVTFSTLTNLYIRNASIKDDCLEKAASTLKEMEKRTCRKTRVAYSSLLSLHTNMGNVDEVNRIWNKMKGCFRKMNDEEYICMISSLLKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDRGLMEMAEIFCNQLEQKGVSLSYTTWEVFTMGYLKKKDVNKFLYYFRKAI-SSVKKWIPNDMLVQEAFTVIQEQSHIEGAEQLLAILRDAGHVNTNVYNLFLKTYAAAGKMPLIVTERMKKDNVQLDEETHRLL 1482 +N++ EG V +K+ L R ++LRK ++ + ALE+ EWM+ + +I D+A+ L+LI K +GL +AE +F L D ++ Q T +LL+ Y KA+A M + + + +P+N +M++Y+ G+ EKVP L +K + +P +T+++ + +C S+ D++ E+VL E+K + + W TF+ L +YI K KA LK +E R Y L++L+T + N EV R+W+ +K + +N+ Y+ M+ +L KL D GV+ ++ EWES T D+R++N+ ++SY+ + + E AE N +K ++ M LK + L +F A+ K W + L+ F +E ++GAE+ L +++ Y L +KTY AAGK + +R+++ + +DEE LL Sbjct: 60 LNQFVMEG-VPVKKHDLIRYAKDLRKFRQPQRALEIFEWME-RKEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYI-----KVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLL 497
BLAST of Ca_09063.1 vs. DB:Swiss
Match: PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09450 PE=1 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 9.347e-63 Identity = 125/344 (36.34%), Postives = 199/344 (57.85%), Query Frame = 1 Query: 97 DTLGRRLLSLVYPKRSAVIAINKWKEEGHVLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVHLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLADKAEAIMLKMSECGFLQ-SPIPYNRMMSLYISNGKLEKVPKLFEELKM-NTSPDIVTFNLLLTACASVNDVETAERVLLELKK-AKVDPDWVTFSTLTNLYIRNASIKDDCLEKAASTLK-EMEKRTCRKTRVAYSSLLSLHTNMGNVDEVNRIWNKMKGCFRKMNDEEYICMISSLLKLGDFAGVENLYKEW-ESVSGTNDVRVSNLLLTSYVDRGLMEMAEIF 1113 D L R+ L PKRSA + KW EG+ + +L + +ELR+ +RYKHALEV EWM + K+ + DYA +DLI+KV G+++AE++FE L + T T+LLHAY + ++AEA+ ++ E L I YN MM+LY+S G++EKVP++ E LK SPDI T+NL L++CA+ +++ ++L E++ A + WV + LT++YI ++ + + A STL E EK ++ + Y L+ LHT +GN +++IW ++ + ++ YIC++SS L LG E + +W ES + D +L ++ D GL +A F Sbjct: 55 DDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTIN-ELREISKELRRTRRYKHALEVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTN-----AESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGF 392
BLAST of Ca_09063.1 vs. DB:Swiss
Match: PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g02370 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 2.283e-57 Identity = 133/449 (29.62%), Postives = 234/449 (52.12%), Query Frame = 1 Query: 157 INKWKEEGHVLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVHLDLITKVRGLNSAEKFFEDL-PDKMRGQPTCTALLHAYVQNNLADKAEAIMLKMSECGFLQSPIPYNRMMSLYISNGKLEKVPKLFEELKM-NTSPDIVTFNLLLTACASVNDVETAERVLLEL-KKAKVDPDWVTFSTLTNLYIRNASIKDDCLEKAASTLKEMEKRTCRKTRVAYSSLLSLHTNMGNVDEVNRIWNKMKGCFRKMNDEEYICMISSLLKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDRGLMEMAEIFCNQLEQKGVSLSYTTWEVFTMGYLKKKDVNKFLYYFRKAISSVK----KWIPNDMLVQEAFTVIQEQSHIEGAEQLLAILRDAGHVNTNVYNLFLKTYAAAGKMPLIVTERMKKDNVQLDEETHRLL 1482 +N++ EG + RK L R + LRK +R +HA E+ +WM+ + + D+A+ LDLI K +GL +AE +F +L P Q T AL++ Y +KA+A M E F+ + +P+N MMS+Y+ + EKVP L + +K SP VT+++ + +C S+ND++ E+++ E+ K ++ W TFS L +Y K EKA S LK ME++ R ++ L+SL+ + EV R+W +K ++N+ Y+ M+ ++ KLGD G++ ++ EWES D+R++N+ + +Y+ + E AE + +K ++ + L+ + + + A+S +W + LV F ++ ++GAE IL + +++ +KTYAAA K + ER+ + +++ EE LL Sbjct: 91 LNQFIMEG-ITVRKDDLFRCAKTLRKFRRPQHAFEIFDWME-KRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYT-----KAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLL 532
BLAST of Ca_09063.1 vs. DB:Swiss
Match: PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 2.352e-44 Identity = 116/341 (34.02%), Postives = 178/341 (52.20%), Query Frame = 1 Query: 112 RLLSLVYPKRSAVIAINKWKEEG-HVLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVHLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLA-DKAEAIMLKMSECGFLQSPIPYNRMMSLYISNGKLEKVPKLFEELKMN-TSPDIVTFNLLLTACASVNDVETAERVLLELKKAK-VDPDWVTFSTLTNLYIRNASIKDDCLEKAASTLKEMEKRTCRKT-RVAYSSLLSLHTNMGNVDEVNRIWNKMKGCFRKMNDEEYICMISSLLKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDRGLMEMAEIFCN 1119 R+ ++ + + +W+++G V P ++ +I++LR + + AL+V EWM + L+ D+A L LI V GL AEKFFE +P RG T+LL++Y +++ KAEA KM + G L P+PYN MMSLY + EKV +L E+K N D VT N +L ++V DV E+ L + + + +W T + Y+R S KA L+ E+ +K+ + AY L+ L+ GN +EV R+W K + ++ Y +I SLLK+ D G E +YK WES+ D R+ +L + Y DRG+ E AE N Sbjct: 41 RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRV--IIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSG-----KAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMN 374 HSP 2 Score: 68.9366 bits (167), Expect = 5.770e-11 Identity = 39/118 (33.05%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 214 MIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVHLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQN--NLADKAEAIMLKMSECGFLQSPIPYNRMMSLYISNGKLE 561 +I+ LR +K++ AL+V EWM + L DYA L L V GL AEK+FE++P+ M+ ALL +Y ++ NL + + I+ +M E I N ++ +Y + K++ Sbjct: 406 LIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREMEENNVDPDLITVNHVLKVYAAESKIQ 523 The following BLAST results are available for this feature:
BLAST of Ca_09063.1 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: C. arietinum ICC 4958, v2.0 (desi)
Date Performed: 2019-05-21 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_09063.1_ICC4958_v2 ID=Ca_09063.1_ICC4958_v2; Name=Ca_09063.1; organism=Cicer arietinum; type=mRNA; length=3158bpback to top protein sequence of Ca_09063.1_ICC4958_v2 >Ca_09063.1_ICC4958_v2 ID=Ca_09063.1_ICC4958_v2; Name=Ca_09063.1_ICC4958_v2; organism=Cicer arietinum; type=polypeptide; length=575bpback to top mRNA from alignment at Ca_LG_4:12743124..12746281+ Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_09063.1_ICC4958_v2 ID=Ca_09063.1_ICC4958_v2; Name=Ca_09063.1; organism=Cicer arietinum; type=mRNA; length=3158bp; location=Sequence derived from: Ca_LG_4:12743124..12746281+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca_LG_4:12743124..12746281+ >Ca_09063.1_ICC4958_v2 ID=Ca_09063.1_ICC4958_v2; Name=Ca_09063.1; organism=Cicer arietinum; type=CDS; length=1728bp; location=Sequence derived from: Ca_LG_4:12743124..12746281+ (Cicer arietinumback to top |