chickpea-S95362xHowzat-F6-RIL

Map Overview


Name	chickpea-S95362xHowzat-F6-RIL
Species	Cicer arietinum
Map type	genetic
Population type	RIL
Map unit	cM
Maternal parent	S95362
Paternal parent	Howzat
Population size	119
Number of loci	333
Number of QTL	2
Number of linkage groups	10
Publication	[view all]
Contact	John Forster

Stock

Name

Type

Details

S95362_x_Howzat-F6-RIL

population

Origin detail:	Australia
Population size:	119

Contact

Name

Details

John Forster

First name:	John
Last name:	Forster
Title:	Researcher
Institution:	Biosciences Research Division, Department of Environment and Primary Industries, AgriBio
Address:	Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC 3083, Australia
Country:	Australia
Email:	john.forster@depi.vic.gov.au
Phone:	61 390327054
Last update:	Mar 2017

Publication


Year	Publications
2014	Stephens A, Lombardi M, Cogan NOI, Forster JW, Hobson K, Materne M, Kaur S. Genetic marker discovery, intraspecific linkage map construction and quantitative trait locus analysis of ascochyta blight resistance in chickpea (Cicer arietinum L.). Molecular breeding. 2014; 33(2):297-313.

Map Loci

This map contains 333 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40001381	SNP_40001381	marker_locus	55 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40000707	SNP_40000707	marker_locus	73.1 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40000871	SNP_40000871	marker_locus	75.3 cM
chickpea-S95362xHowzat-F6-RIL.LG6	TA106	TA106	marker_locus	75.7 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40000963	SNP_40000963	marker_locus	81.8 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40001053	SNP_40001053	marker_locus	93.7 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40002124	SNP_40002124	marker_locus	98.9 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40002090	SNP_40002090	marker_locus	103.5 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40000986	SNP_40000986	marker_locus	0 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40001025	SNP_40001025	marker_locus	12.4 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40002109	SNP_40002109	marker_locus	22.4 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40000935	SNP_40000935	marker_locus	22.4 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40000937	SNP_40000937	marker_locus	22.4 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40002196	SNP_40002196	marker_locus	23.7 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40002391	SNP_40002391	marker_locus	24.1 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40001246	SNP_40001246	marker_locus	25 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40001726	SNP_40001726	marker_locus	25 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40000768	SNP_40000768	marker_locus	25 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40000776	SNP_40000776	marker_locus	25 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40000777	SNP_40000777	marker_locus	25 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40001557	SNP_40001557	marker_locus	25 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40001558	SNP_40001558	marker_locus	25 cM
chickpea-S95362xHowzat-F6-RIL.LG7	SNP_40000884	SNP_40000884	marker_locus	31.9 cM
chickpea-S95362xHowzat-F6-RIL.LG7	CaM0286	CaM0286	marker_locus	36.8 cM
chickpea-S95362xHowzat-F6-RIL.LG7	TA44	TA44	marker_locus	56.1 cM

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Map QTL

This map contains 2 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2005	QTL	51 cM	54 cM	-
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2009	QTL	51 cM	54 cM	-

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chickpea-S95362xHowzat-F6-RIL