LR48_mrnaVigan09g031100

Transcript Overview
NameLR48_mrnaVigan09g031100
Unique NameLR48_mrnaVigan09g031100_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length2633
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_9-CM003379.1supercontigChr_9-CM003379.1:3516363..3518995 -Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR186Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR201Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR224Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR231Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL010Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR106Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR121Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0092Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0307Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0363Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0416Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0540Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0598Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0819Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0822Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0971Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR275Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR309Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0374Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0383Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR249Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR191Pisum sativum Cameor genome v1aPisum sativum
aspsR219Pisum sativum Cameor genome v1aPisum sativum
aspsR221Pisum sativum Cameor genome v1aPisum sativum
aspsR232Pisum sativum Cameor genome v1aPisum sativum
aspvR175Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR187Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR251Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR142Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR157Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR198Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR203Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR204Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR188Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR198Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR217Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR226Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR191Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR200Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR221Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR232Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR148Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR157Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR164Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR185Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR206Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR238Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR241Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR251Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR136Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR183Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR195Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR173Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR188Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR214Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat5g013280.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_014645129.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Ca_04894Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_14972.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun09g252900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr09.1246Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_09738Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.2g206400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.009G016300.3Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_012715945.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_12726.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-KK1_019373Cajanus cajan Asha genome v1.0Cajanus cajan
jg55955.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.2g167080.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan09g031100gene-LR48_Vigan09g031100_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g031100LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518993..3518995LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518993..3518995Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518842..3518995LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518842..3518995Vigna angularisexon
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518677..3518727LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518677..3518727Vigna angularisexon
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518498..3518583LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518498..3518583Vigna angularisexon
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518230..3518318LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518230..3518318Vigna angularisexon
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518089..3518143LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518089..3518143Vigna angularisexon
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517410..3517462LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517410..3517462Vigna angularisexon
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517278..3517328LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517278..3517328Vigna angularisexon
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517145..3517193LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517145..3517193Vigna angularisexon
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516987..3517055LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516987..3517055Vigna angularisexon
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516829..3516905LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516829..3516905Vigna angularisexon
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516514..3516712LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516514..3516712Vigna angularisexon
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516363..3516437LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516363..3516437Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518728..3518841LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518728..3518841Vigna angularisintron
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518584..3518676LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518584..3518676Vigna angularisintron
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518319..3518497LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518319..3518497Vigna angularisintron
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518144..3518229LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3518144..3518229Vigna angularisintron
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517463..3518088LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517463..3518088Vigna angularisintron
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517329..3517409LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517329..3517409Vigna angularisintron
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517194..3517277LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517194..3517277Vigna angularisintron
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517056..3517144LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3517056..3517144Vigna angularisintron
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516906..3516986LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516906..3516986Vigna angularisintron
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516713..3516828LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516713..3516828Vigna angularisintron
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516438..3516513LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516438..3516513Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS19871CDS19871_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516363..3516365LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3516363..3516365Vigna angularisstop_codon


Homology
[Close]
BLAST of LR48_mrnaVigan09g031100 vs. DB:Swiss
Match: E2FC_ARATH (Transcription factor E2FC OS=Arabidopsis thaliana OX=3702 GN=E2FC PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.911e-85
Identity = 146/274 (53.28%), Postives = 187/274 (68.25%), Query Frame = 1 
Query:  181 NCRYDSSLGLLTKKFVSLIQDARDGTLDLNKTAEILEVQKRRIYDITNVLEGVGLIEKTSKNHIQWKGCDGLGPRELENQINGLKAEVESLYARECELDDCIRKKQELLRNLXXXXXXQKYLFLTKEEILSLPCFQNQEIIAIKAPKASFIEVPDPDEVESVFRQRQYKMIVRSATGPIYLYLLSKDDCKYEDDSVKRVKLMDPSWNSEQCIKRGVGLLESHDDKQNTSESFNFHESQASGIQ----EITPTDFEMEDDYWFQSDPGVRLTQLW 990
            NCRYDSSLGLLTKKFV LIQ+A DGTLDLN  A +LEVQKRRIYDITNVLEG+GLIEKT+KNHI+WKG D LG ++L +QI+ LK+EVES+ + E  LDD IR++QE LR+LEE +  ++Y+F+T+E+I SLP FQNQ ++AIKAP AS+IEVPDPDE+   F Q QY+M++RS  GPI +YLLS    KY+ DS                        E+ D   N S+     +    G+     +I  +D +++ DYWF+SD  V LT LW
Sbjct:  153 NCRYDSSLGLLTKKFVKLIQEAEDGTLDLNYCAVVLEVQKRRIYDITNVLEGIGLIEKTTKNHIRWKGADNLGQKDLGDQISRLKSEVESMQSEESRLDDLIRERQEALRSLEEDDYCRRYMFMTEEDITSLPRFQNQTLLAIKAPTASYIEVPDPDEMS--FPQ-QYRMVIRSRMGPIDVYLLS----KYKGDSA-----------------------ETSDKLGNESD-----QKAPVGVDTPSLKIVTSDTDLKADYWFESDAEVSLTDLW 391
[Close]
BLAST of LR48_mrnaVigan09g031100 vs. DB:Swiss
Match: E2FB_ARATH (Transcription factor E2FB OS=Arabidopsis thaliana OX=3702 GN=E2FB PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.292e-76
Identity = 153/347 (44.09%), Postives = 204/347 (58.79%), Query Frame = 1 
Query:   40 NLEVVPPPVQTQSTERGKQNGKSKLSRNTKSGT--HRPSADSP--NLTAVNNCRYDSSLGLLTKKFVSLIQDARDGTLDLNKTAEILEVQKRRIYDITNVLEGVGLIEKTSKNHIQWKGCDGLGPRELENQINGLKAEVESLYARECELDDCIRKKQELLRNLXXXXXXQKYLFLTKEEILSLPCFQNQEIIAIKAPKASFIEVPDPDEVESVFRQRQYKMIVRSATGPIYLYLLSKDDCKYED--DSVKRVKLMDPSWNSEQC---IKRGVGLLESH--------------------DDKQNTSESFNFHESQASGIQEITPTDFEMEDDYWFQSDPG-VRLTQLW 990
            N  V+  PV   S + GK    S+ +++ KSGT     +A SP  N      CRYDSSLGLLTKKF++LI+ A DG LDLNK A+ LEVQKRRIYDITNVLEG+GLIEKT KN IQWKG D   P E    I  L+ EV++L A E  LDD IR+ QE L +L E E++++ LF+T+ +I +LPCFQN+ +IA+KAP  + +EVPDPDE      QR+Y++I+RS  GPI +YL+S+ +  +ED   + +   + D   N       +    GL E+H                    DD Q        H+    GI +I P D +M  DYWF+S+ G V +T +W
Sbjct:   79 NTGVLQTPV---SGKGGKAKKTSRSAKSNKSGTLASGSNAGSPGNNFAQAGTCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKTLKNRIQWKGLDVSKPGETIESIANLQDEVQNLAAEEARLDDQIRESQERLTSLSEDENNKRLLFVTENDIKNLPCFQNKTLIAVKAPHGTTLEVPDPDEAGGY--QRRYRIILRSTMGPIDVYLVSQFEESFEDIPQADEPSNVPDEPSNVPDVPSNLPSTSGLPENHDVSMPMKEESTERNMETQEVDDTQRVYSDIESHDF-VDGIMKIVPPDLDMGVDYWFRSEVGEVSITDMW 419
[Close]
BLAST of LR48_mrnaVigan09g031100 vs. DB:Swiss
Match: E2FA_ARATH (Transcription factor E2FA OS=Arabidopsis thaliana OX=3702 GN=E2FA PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 4.857e-74
Identity = 146/325 (44.92%), Postives = 202/325 (62.15%), Query Frame = 1 
Query:   88 GKQNGKSKLSRNTKSGTHRP---SADSP-NLTAVNNCRYDSSLGLLTKKFVSLIQDARDGTLDLNKTAEILEVQKRRIYDITNVLEGVGLIEKTSKNHIQWKGCDGL-GPRELENQINGLKAEVESLYARECELDDCIRKKQELLRNLXXXXXXQKYLFLTKEEILSLPCFQNQEIIAIKAPKASFIEVPDPDEVESVFRQRQYKMIVRSATGPIYLYLLSKDDCKYEDDSVKR------VKLMDPSWNSEQ------CIKRGVGLLESHDDKQ---NTSESFNFHESQASGIQEITPTDFEM-EDDYWFQSDPGVRLTQLWGTN 999
            G+ N KSK ++  KS    P   +A SP  LT   +CRYDSSLGLLTKKFV+LI+ A+DG LDLNK AE LEVQKRRIYDITNVLEG+ LIEK  KN I WKG D   G  + +  +  L+AE+E+L   E  LD+ IR+ +E LR+L E+E +QK+LF+T+E+I SLP FQNQ +IA+KAP  + +EVPDPDE      QR+Y++I+RS  GPI +YL+S+ + K+ED +         + +   S ++         +      + SHD        +   N+ + Q  G+ +ITP+D E  E DYW  S+  + +T +W T+
Sbjct:  131 GRVNIKSK-AKGNKSTPQTPISTNAGSPITLTPSGSCRYDSSLGLLTKKFVNLIKQAKDGMLDLNKAAETLEVQKRRIYDITNVLEGIDLIEKPFKNRILWKGVDACPGDEDADVSVLQLQAEIENLALEEQALDNQIRQTEERLRDLSENEKNQKWLFVTEEDIKSLPGFQNQTLIAVKAPHGTTLEVPDPDEAAD-HPQRRYRIILRSTMGPIDVYLVSEFEGKFEDTNGSGAAPPACLPIASSSGSTGHHDIEALTVDNPETAIVSHDHPHPQPGDTSDLNYLQEQVGGMLKITPSDVENDESDYWLLSNAEISMTDIWKTD 453
[Close]
BLAST of LR48_mrnaVigan09g031100 vs. DB:Swiss
Match: E2F4_XENLA (Transcription factor E2F4 OS=Xenopus laevis OX=8355 GN=e2f4 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 4.297e-43
Identity = 92/199 (46.23%), Postives = 128/199 (64.32%), Query Frame = 1 
Query:  151 ADSPNLTAVNNCRYDSSLGLLTKKFVSLIQDARDGTLDLNKTAEILEV-QKRRIYDITNVLEGVGLIEKTSKNHIQWKGCD-GLGPRELENQINGLKAEVESLYARECELDDCIRKKQELLRNLXXXXXXQKYLFLTKEEILSLPCFQNQEIIAIKAPKASFIEVPDPDEVESVFRQRQYKMIVRSATGPIYLYLLSKD 741
            AD   LT V   R++ SLGLLT KFVSL+Q+A DG LDL   A+ L V QKRRIYDITNVLEG+GLIEK SKN IQWKG   G   RE+ +++  LKAE+  L  RE ELD      Q+ ++N+ +   +    +L  E+I    CF+   ++AI+AP  + +EVP P   E+   Q+++++ ++S TGPI + L++KD
Sbjct:    2 ADPAQLT-VTPSRHEKSLGLLTSKFVSLLQEAEDGVLDLKAAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIDLKAELADLEQREQELDQQRVWVQQSIKNVTDDVQNTGLAYLNHEDICR--CFRGDTLLAIRAPSGTCLEVPVP---ENTNGQKKFQIHLKSTTGPIEVLLVNKD 194
[Close]
BLAST of LR48_mrnaVigan09g031100 vs. DB:Swiss
Match: E2F4_HUMAN (Transcription factor E2F4 OS=Homo sapiens OX=9606 GN=E2F4 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 8.866e-43
Identity = 89/187 (47.59%), Postives = 125/187 (66.84%), Query Frame = 1 
Query:  187 RYDSSLGLLTKKFVSLIQDARDGTLDLNKTAEILEV-QKRRIYDITNVLEGVGLIEKTSKNHIQWKGCD-GLGPRELENQINGLKAEVESLYARECELDDCIRKKQELLRNLXXXXXXQKYLFLTKEEILSLPCFQNQEIIAIKAPKASFIEVPDPDEVESVFRQRQYKMIVRSATGPIYLYLLSKD 741
            R++ SLGLLT KFVSL+Q+A+DG LDL   A+ L V QKRRIYDITNVLEG+GLIEK SKN IQWKG   G   RE+ +++  LKAE+E L  RE ELD      Q+ +RN+ E   +    ++T E+I    CF    ++AI+AP  + +EVP P   E +  Q++Y++ ++S +GPI + L++K+
Sbjct:   17 RHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDICR--CFAGDTLLAIRAPSGTSLEVPIP---EGLNGQKKYQIHLKSVSGPIEVLLVNKE 198
[Close]
BLAST of LR48_mrnaVigan09g031100 vs. DB:Swiss
Match: E2F5_MOUSE (Transcription factor E2F5 OS=Mus musculus OX=10090 GN=E2f5 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 1.289e-42
Identity = 87/201 (43.28%), Postives = 134/201 (66.67%), Query Frame = 1 
Query:  145 PSADSPNLTAVNNCRYDSSLGLLTKKFVSLIQDARDGTLDLNKTAEILEV-QKRRIYDITNVLEGVGLIEKTSKNHIQWKGCD-GLGPRELENQINGLKAEVESLYARECELDDCIRKKQELLRNLXXXXXXQKYLFLTKEEILSLPCFQNQEIIAIKAPKASFIEVPDPDEVESVFRQRQYKMIVRSATGPIYLYLLSKD 741
            PS+      A  + R++ SLGLLT KFVSL+Q+A+DG LDL   A+ L V QKRRIYDITNVLEG+ LIEK SKN IQWKG   G   +E+ +++  LKAE+E L  +E ELD      Q+ ++N+ E   + ++ ++T E+I +  CF    ++AI+AP  + +EVP P+  ++   Q++Y++ ++S +GPI++ L++K+
Sbjct:   26 PSSQPSAALAGGSSRHEKSLGLLTTKFVSLLQEAQDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRCLKAEIEDLELKERELDQQKLWLQQSIKNVMEDSINNRFSYVTHEDICN--CFHGDTLLAIQAPSGTQLEVPIPEMGQN--GQKKYQINLKSHSGPIHVLLINKE 222
[Close]
BLAST of LR48_mrnaVigan09g031100 vs. DB:Swiss
Match: E2F4_MOUSE (Transcription factor E2F4 OS=Mus musculus OX=10090 GN=E2f4 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.116e-42
Identity = 89/187 (47.59%), Postives = 125/187 (66.84%), Query Frame = 1 
Query:  187 RYDSSLGLLTKKFVSLIQDARDGTLDLNKTAEILEV-QKRRIYDITNVLEGVGLIEKTSKNHIQWKGCD-GLGPRELENQINGLKAEVESLYARECELDDCIRKKQELLRNLXXXXXXQKYLFLTKEEILSLPCFQNQEIIAIKAPKASFIEVPDPDEVESVFRQRQYKMIVRSATGPIYLYLLSKD 741
            R++ SLGLLT KFVSL+Q+A+DG LDL   A+ L V QKRRIYDITNVLEG+GLIEK SKN IQWKG   G   RE+ +++  LKAE+E L  RE ELD      Q+ +RN+ E   +    ++T E+I    CF    ++AI+AP  + +EVP P   E +  Q++Y++ ++S +GPI + L++K+
Sbjct:   17 RHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDICR--CFAGDTLLAIRAPSGTSLEVPIP---EGLNGQKKYQIHLKSMSGPIEVLLVNKE 198
[Close]
BLAST of LR48_mrnaVigan09g031100 vs. DB:Swiss
Match: E2F5_RAT (Transcription factor E2F5 (Fragment) OS=Rattus norvegicus OX=10116 GN=E2f5 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.707e-42
Identity = 85/187 (45.45%), Postives = 129/187 (68.98%), Query Frame = 1 
Query:  187 RYDSSLGLLTKKFVSLIQDARDGTLDLNKTAEILEV-QKRRIYDITNVLEGVGLIEKTSKNHIQWKGCD-GLGPRELENQINGLKAEVESLYARECELDDCIRKKQELLRNLXXXXXXQKYLFLTKEEILSLPCFQNQEIIAIKAPKASFIEVPDPDEVESVFRQRQYKMIVRSATGPIYLYLLSKD 741
            R++ SLGLLT KFVSL+Q+A+DG LDL   A+ L V QKRRIYDITNVLEG+ LIEK SKN IQWKG   G   +E+ +++  LKAE+E L  +E ELD      Q+ ++N+ E   + ++ ++T E+I S  CF    ++AI+AP  + +EVP P+  ++   Q++Y++ ++S +GPI++ L++K+
Sbjct:    5 RHEKSLGLLTTKFVSLLQEAQDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRCLKAEIEDLELKERELDQQKLWLQQSIKNVMEDSINNRFSYVTHEDICS--CFNGDTLLAIQAPSGTQLEVPIPEMGQN--GQKKYQINLKSHSGPIHVLLINKE 187
[Close]
BLAST of LR48_mrnaVigan09g031100 vs. DB:Swiss
Match: E2F5_HUMAN (Transcription factor E2F5 OS=Homo sapiens OX=9606 GN=E2F5 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.117e-41
Identity = 83/187 (44.39%), Postives = 129/187 (68.98%), Query Frame = 1 
Query:  187 RYDSSLGLLTKKFVSLIQDARDGTLDLNKTAEILEV-QKRRIYDITNVLEGVGLIEKTSKNHIQWKGCD-GLGPRELENQINGLKAEVESLYARECELDDCIRKKQELLRNLXXXXXXQKYLFLTKEEILSLPCFQNQEIIAIKAPKASFIEVPDPDEVESVFRQRQYKMIVRSATGPIYLYLLSKD 741
            R++ SLGLLT KFVSL+Q+A+DG LDL   A+ L V QKRRIYDITNVLEG+ LIEK SKN IQWKG   G   +E+ +++  LKAE+E L  +E ELD      Q+ ++N+ +   + ++ ++T E+I +  CF    ++AI+AP  + +EVP P+  ++   Q++Y++ ++S +GPI++ L++K+
Sbjct:   50 RHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICN--CFNGDTLLAIQAPSGTQLEVPIPEMGQN--GQKKYQINLKSHSGPIHVLLINKE 232
[Close]
BLAST of LR48_mrnaVigan09g031100 vs. DB:Swiss
Match: E2F3_MOUSE (Transcription factor E2F3 OS=Mus musculus OX=10090 GN=E2f3 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.823e-38
Identity = 85/196 (43.37%), Postives = 120/196 (61.22%), Query Frame = 1 
Query:  148 SADSPNL--TAVNNCRYDSSLGLLTKKFVSLIQDARDGTLDLNKTAEILEVQKRRIYDITNVLEGVGLIEKTSKNHIQWKGCDGLGPRELENQINGLKAEVESLYARECELDDCIRKKQELLRNLXXXXXXQKYLFLTKEEILSLPCFQNQEIIAIKAPKASFIEVPDPDEVESVFRQRQYKMIVRSATGPIYLYL 729
            S DSP    +     RYD+SLGLLTKKF+ L+  + DG LDLNK AE+L+VQKRRIYDITNVLEG+ LI+K SKN++QW GC       +  Q  GL  EV  L   E +LD+ I+     L+ L E   +Q+  ++T ++I  +   ++Q +I +KAP  + +EV  PD +ES+      ++ + S  GPI +YL
Sbjct:  155 SPDSPKTPKSPSEKTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKKSKNNVQWMGCSLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTEDSENQRLAYVTYQDIRKISGLKDQTVIVVKAPPETRLEV--PDSIESL------QIHLASTQGPIEVYL 342
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan09g031100 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
E2FC_ARATH2.911e-8553.28Transcription factor E2FC OS=Arabidopsis thaliana ... [more]
E2FB_ARATH1.292e-7644.09Transcription factor E2FB OS=Arabidopsis thaliana ... [more]
E2FA_ARATH4.857e-7444.92Transcription factor E2FA OS=Arabidopsis thaliana ... [more]
E2F4_XENLA4.297e-4346.23Transcription factor E2F4 OS=Xenopus laevis OX=835... [more]
E2F4_HUMAN8.866e-4347.59Transcription factor E2F4 OS=Homo sapiens OX=9606 ... [more]
E2F5_MOUSE1.289e-4243.28Transcription factor E2F5 OS=Mus musculus OX=10090... [more]
E2F4_MOUSE2.116e-4247.59Transcription factor E2F4 OS=Mus musculus OX=10090... [more]
E2F5_RAT3.707e-4245.45Transcription factor E2F5 (Fragment) OS=Rattus nor... [more]
E2F5_HUMAN1.117e-4144.39Transcription factor E2F5 OS=Homo sapiens OX=9606 ... [more]
E2F3_MOUSE3.823e-3843.37Transcription factor E2F3 OS=Mus musculus OX=10090... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 158..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
IPR003316E2F/DP family, winged-helix DNA-binding domainSMARTSM01372E2F_TDP_2coord: 63..128
e-value: 1.1E-34
score: 131.2
IPR003316E2F/DP family, winged-helix DNA-binding domainPFAMPF02319E2F_TDPcoord: 65..128
e-value: 6.2E-25
score: 87.0
IPR032198E2F transcription factor, CC-MB domainPFAMPF16421E2F_CC-MBcoord: 144..244
e-value: 2.6E-25
score: 88.5
IPR032198E2F transcription factor, CC-MB domainCDDcd14660E2F_DDcoord: 139..247
e-value: 4.16525E-35
score: 121.471
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 58..130
e-value: 1.0E-28
score: 100.6
IPR037241E2F-DP heterodimerization regionSUPERFAMILY144074E2F-DP heterodimerization regioncoord: 140..247
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 63..126

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g031100; organism=Vigna angularis; type=mRNA; length=2633bp
ATGCAGCCGAGTCAAAGATATGAAAATAGTCACAGAAGTAATCTCGAAGT
GGTTCCCCCTCCAGTTCAAACCCAGTCTACCGAAAGAGGAAAGCAAAATG
GTAAATCAAAACTTTCTAGAAACACAAAATCTGGGACTCACAGACCTAGT
GCCGGTAACACTCTTTTAGATTATTAGATTATGATTCTGTTAAACTCTTC
ATTATGTTGCTTTTATATTATAACTATTATCTTGTTGGAGTTTATGTTGG
GTGTATTTTTCTTATCAGATTCTCCTAATTTAACTGCGGTTAACAACTGT
CGTTATGACAGTTCCTTAGGTATGTCTATACTCAAGTATTACTCCACTGT
CCCTTTTTAACTCAATTGTCAAGCTGACTCTCTTTATAATGCTTATAATA
TGCCTTGGACAGGACTGTTGACAAAGAAATTTGTGAGCTTGATCCAAGAT
GCTAGGGATGGCACCCTTGATCTTAACAAAACCGCTGAGATCTTGGAGGT
ATAGAAATGTCTTTCATAGTTTTGTTGACAGAAGGACCTTTTTGTCAGGC
ATATTTTGATCTTTTCTTCCAGTTCTTTTAATTTAAAATTTTCTATTTGT
GCTATTAGTACATGCACTTCTGCTTCATGGCTTTTTAATTTCTGGTTTTA
TAATATATCTAAACTTAATTGTGTCAGGTTCAGAAAAGGAGAATCTATGA
CATTACAAATGTTCTTGAAGGAGTAGGATTGATAGAGAAAACTTCAAAAA
ATCATATACAGTGGAAGTAAATATTATGATTTTGTTTGTTACTTTGAAGT
TTCTTTTATCAGATTTCCTGTATATATGATACACGTTGTGTTTTACGAGC
AGGGGATGTGATGGACTTGGGCCACGAGAACTGGAGAACCAAATAAACGG
TCTAAAGGTTTTGGATCTTTTTTAATGGACTATGTTCAAATCTCCTGCTT
TTAGACTGCTTGCATGGTTGCTTTGAAGTGTAAACATGACTTAATTTTTA
CATTCGATTATATTGAAAAATGAAAACCTACTTTGCCTCTTTTGAAGCCA
TGGTATGGTATGTTCAACATATTTCTTCTAGAAGCGAAAAGAAAATTTTC
AGGTCACATAAATGCATCTTAAGAGGAACACTTGTATGAGTATCTTTGTT
ATGTAGAAACTCAAGCTTATGCTTGACATGTGTCTGTATGACGTTTGTGT
GTCTTACAAATCCATGATAGATACCTTTTAATAAGCTTCTTGGTCGAGGC
AAAATCTGAATGTAACATGATTCCATTTCTTCTGATACTATTTAAATATA
GATAGGGTATAAGCCTCATATTGCGGATCGAATGTATTGGTCTCGCCACT
TCTATCCTGAACTAAATATGCCTATGCAGATAATATAGCCAACTTCTGTT
CGTGCCTTGGACTGATGTAATTGATCACCAATTTTAGTTTAAAATGCATG
TTGTTCTTAGGATTTTAGCTCCACCTGCCAATACTGCTTGTGTTAGTGAT
TCAGTCCAACTTTGACAATTTGATTCGATACAGGCTGAAGTTGAAAGTCT
ATATGCCAGGGAATGCGAACTTGATGATTGTATAAGGTCTGTTTGTAAAG
TGATATCGCGTGAAGTTCCATATGGTTGATCAATTCTTTTAAAACAATTA
CCATTTTAATTTCTCAGGAAAAAACAGGAGCTTCTAAGAAACCTAGAGGA
AAGTGAAAGCTCTCAGAAGTAGGAATTTCTGACAACTTGCCTTGTATTTT
AGTTCCAATTTATAGGTTTCTTTACCTGATGGTAAGCTTGCTTGATCATT
AGGTACCTTTTTTTGACCAAGGAAGAGATTCTTAGTCTTCCATGCTTCCA
GGTCATTTTTTTTTCTATACGCTTAGATTTTATGAAGATATATCTATTTA
CCATTATGGCCACTTTACTTATTATCTACTATTTTCACAGAATCAAGAAA
TTATAGCAATCAAGGCTCCAAAAGCTAGTTTCATCGAGGTCCCTGATCCT
GATGAGGTGGTATCTACTTTCGACTAACTTGGGTGTTCAAAAGGTTTGGT
GTATCACGAGTTTTAACTGACTCCTCACTCAAATGAGCAGGAATCAGTTT
TCCGGCAAAGGCAGTACAAAATGATTGTTAGAAGCGCCACTGGACCAATA
TATTTGTACCTCTTGAGGTAAACATTGCATGCAAAAGTTTCTTTATTATT
ATGTTAAATCTTTGTTTGTTTAAAGGTGATTTTTCCTCTGTATTGAGTCT
TCTACTAACTGCTGAACTTTTTAACCCTTGAAGCAAGGACGACTGCAAGT
ATGAAGATGATAGTGTCAAACGGGTGAAATTAATGGATCCATCATGGAAC
AGTGAGCAATGCATAAAGAGAGGTGTGGGATTATTAGAAAGCCACGACGA
TAAACAAAATACTTCTGAAAGTTTCAATTTTCATGAATCACAGGCATCTG
GAATTCAAGAAATAACTCCCACTGATTTTGAAGTATGTATAACTTAAGCT
CTGAGTTGTAAAATATCAAAATCTGGAAAGACATGTCATGTCATTGTGTT
TATTGCAGATGGAAGATGACTACTGGTTTCAGTCAGATCCTGGAGTAAGG
CTAACACAACTGTGGGGTACCAATATCTTCTAA
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protein sequence of LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1

>LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=335bp
MQPSQRYENSHRSNLEVVPPPVQTQSTERGKQNGKSKLSRNTKSGTHRPS
ADSPNLTAVNNCRYDSSLGLLTKKFVSLIQDARDGTLDLNKTAEILEVQK
RRIYDITNVLEGVGLIEKTSKNHIQWKGCDGLGPRELENQINGLKAEVES
LYARECELDDCIRKKQELLRNLEESESSQKYLFLTKEEILSLPCFQNQEI
IAIKAPKASFIEVPDPDEVESVFRQRQYKMIVRSATGPIYLYLLSKDDCK
YEDDSVKRVKLMDPSWNSEQCIKRGVGLLESHDDKQNTSESFNFHESQAS
GIQEITPTDFEMEDDYWFQSDPGVRLTQLWGTNIF
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mRNA from alignment at Chr_9-CM003379.1:3516363..3518995-

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g031100; organism=Vigna angularis; type=mRNA; length=2633bp; location=Sequence derived from: Chr_9-CM003379.1:3516363..3518995- (Vigna angularis
ATGCAGCCGAGTCAAAGATATGAAAATAGTCACAGAAGTAATCTCGAAGT
GGTTCCCCCTCCAGTTCAAACCCAGTCTACCGAAAGAGGAAAGCAAAATG
GTAAATCAAAACTTTCTAGAAACACAAAATCTGGGACTCACAGACCTAGT
GCCGGTAACACTCTTTTAGATTATTAGATTATGATTCTGTTAAACTCTTC
ATTATGTTGCTTTTATATTATAACTATTATCTTGTTGGAGTTTATGTTGG
GTGTATTTTTCTTATCAGATTCTCCTAATTTAACTGCGGTTAACAACTGT
CGTTATGACAGTTCCTTAGGTATGTCTATACTCAAGTATTACTCCACTGT
CCCTTTTTAACTCAATTGTCAAGCTGACTCTCTTTATAATGCTTATAATA
TGCCTTGGACAGGACTGTTGACAAAGAAATTTGTGAGCTTGATCCAAGAT
GCTAGGGATGGCACCCTTGATCTTAACAAAACCGCTGAGATCTTGGAGGT
ATAGAAATGTCTTTCATAGTTTTGTTGACAGAAGGACCTTTTTGTCAGGC
ATATTTTGATCTTTTCTTCCAGTTCTTTTAATTTAAAATTTTCTATTTGT
GCTATTAGTACATGCACTTCTGCTTCATGGCTTTTTAATTTCTGGTTTTA
TAATATATCTAAACTTAATTGTGTCAGGTTCAGAAAAGGAGAATCTATGA
CATTACAAATGTTCTTGAAGGAGTAGGATTGATAGAGAAAACTTCAAAAA
ATCATATACAGTGGAAGTAAATATTATGATTTTGTTTGTTACTTTGAAGT
TTCTTTTATCAGATTTCCTGTATATATGATACACGTTGTGTTTTACGAGC
AGGGGATGTGATGGACTTGGGCCACGAGAACTGGAGAACCAAATAAACGG
TCTAAAGGTTTTGGATCTTTTTTAATGGACTATGTTCAAATCTCCTGCTT
TTAGACTGCTTGCATGGTTGCTTTGAAGTGTAAACATGACTTAATTTTTA
CATTCGATTATATTGAAAAATGAAAACCTACTTTGCCTCTTTTGAAGCCA
TGGTATGGTATGTTCAACATATTTCTTCTAGAAGCGAAAAGAAAATTTTC
AGGTCACATAAATGCATCTTAAGAGGAACACTTGTATGAGTATCTTTGTT
ATGTAGAAACTCAAGCTTATGCTTGACATGTGTCTGTATGACGTTTGTGT
GTCTTACAAATCCATGATAGATACCTTTTAATAAGCTTCTTGGTCGAGGC
AAAATCTGAATGTAACATGATTCCATTTCTTCTGATACTATTTAAATATA
GATAGGGTATAAGCCTCATATTGCGGATCGAATGTATTGGTCTCGCCACT
TCTATCCTGAACTAAATATGCCTATGCAGATAATATAGCCAACTTCTGTT
CGTGCCTTGGACTGATGTAATTGATCACCAATTTTAGTTTAAAATGCATG
TTGTTCTTAGGATTTTAGCTCCACCTGCCAATACTGCTTGTGTTAGTGAT
TCAGTCCAACTTTGACAATTTGATTCGATACAGGCTGAAGTTGAAAGTCT
ATATGCCAGGGAATGCGAACTTGATGATTGTATAAGGTCTGTTTGTAAAG
TGATATCGCGTGAAGTTCCATATGGTTGATCAATTCTTTTAAAACAATTA
CCATTTTAATTTCTCAGGAAAAAACAGGAGCTTCTAAGAAACCTAGAGGA
AAGTGAAAGCTCTCAGAAGTAGGAATTTCTGACAACTTGCCTTGTATTTT
AGTTCCAATTTATAGGTTTCTTTACCTGATGGTAAGCTTGCTTGATCATT
AGGTACCTTTTTTTGACCAAGGAAGAGATTCTTAGTCTTCCATGCTTCCA
GGTCATTTTTTTTTCTATACGCTTAGATTTTATGAAGATATATCTATTTA
CCATTATGGCCACTTTACTTATTATCTACTATTTTCACAGAATCAAGAAA
TTATAGCAATCAAGGCTCCAAAAGCTAGTTTCATCGAGGTCCCTGATCCT
GATGAGGTGGTATCTACTTTCGACTAACTTGGGTGTTCAAAAGGTTTGGT
GTATCACGAGTTTTAACTGACTCCTCACTCAAATGAGCAGGAATCAGTTT
TCCGGCAAAGGCAGTACAAAATGATTGTTAGAAGCGCCACTGGACCAATA
TATTTGTACCTCTTGAGGTAAACATTGCATGCAAAAGTTTCTTTATTATT
ATGTTAAATCTTTGTTTGTTTAAAGGTGATTTTTCCTCTGTATTGAGTCT
TCTACTAACTGCTGAACTTTTTAACCCTTGAAGCAAGGACGACTGCAAGT
ATGAAGATGATAGTGTCAAACGGGTGAAATTAATGGATCCATCATGGAAC
AGTGAGCAATGCATAAAGAGAGGTGTGGGATTATTAGAAAGCCACGACGA
TAAACAAAATACTTCTGAAAGTTTCAATTTTCATGAATCACAGGCATCTG
GAATTCAAGAAATAACTCCCACTGATTTTGAAGTATGTATAACTTAAGCT
CTGAGTTGTAAAATATCAAAATCTGGAAAGACATGTCATGTCATTGTGTT
TATTGCAGATGGAAGATGACTACTGGTTTCAGTCAGATCCTGGAGTAAGG
CTAACACAACTGTGGGGTACCAATATCTTCTAA
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Coding sequence (CDS) from alignment at Chr_9-CM003379.1:3516363..3518995-

>LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g031100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g031100; organism=Vigna angularis; type=CDS; length=1008bp; location=Sequence derived from: Chr_9-CM003379.1:3516363..3518995- (Vigna angularis
ATGCAGCCGAGTCAAAGATATGAAAATAGTCACAGAAGTAATCTCGAAGT
GGTTCCCCCTCCAGTTCAAACCCAGTCTACCGAAAGAGGAAAGCAAAATG
GTAAATCAAAACTTTCTAGAAACACAAAATCTGGGACTCACAGACCTAGT
GCCGATTCTCCTAATTTAACTGCGGTTAACAACTGTCGTTATGACAGTTC
CTTAGGACTGTTGACAAAGAAATTTGTGAGCTTGATCCAAGATGCTAGGG
ATGGCACCCTTGATCTTAACAAAACCGCTGAGATCTTGGAGGTTCAGAAA
AGGAGAATCTATGACATTACAAATGTTCTTGAAGGAGTAGGATTGATAGA
GAAAACTTCAAAAAATCATATACAGTGGAAGGGATGTGATGGACTTGGGC
CACGAGAACTGGAGAACCAAATAAACGGTCTAAAGGCTGAAGTTGAAAGT
CTATATGCCAGGGAATGCGAACTTGATGATTGTATAAGGAAAAAACAGGA
GCTTCTAAGAAACCTAGAGGAAAGTGAAAGCTCTCAGAAGTACCTTTTTT
TGACCAAGGAAGAGATTCTTAGTCTTCCATGCTTCCAGAATCAAGAAATT
ATAGCAATCAAGGCTCCAAAAGCTAGTTTCATCGAGGTCCCTGATCCTGA
TGAGGTGGAATCAGTTTTCCGGCAAAGGCAGTACAAAATGATTGTTAGAA
GCGCCACTGGACCAATATATTTGTACCTCTTGAGCAAGGACGACTGCAAG
TATGAAGATGATAGTGTCAAACGGGTGAAATTAATGGATCCATCATGGAA
CAGTGAGCAATGCATAAAGAGAGGTGTGGGATTATTAGAAAGCCACGACG
ATAAACAAAATACTTCTGAAAGTTTCAATTTTCATGAATCACAGGCATCT
GGAATTCAAGAAATAACTCCCACTGATTTTGAAATGGAAGATGACTACTG
GTTTCAGTCAGATCCTGGAGTAAGGCTAACACAACTGTGGGGTACCAATA
TCTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003316E2F_WHTH_DNA-bd_dom
IPR032198E2F_CC-MB
IPR036388WH-like_DNA-bd_sf
IPR037241E2F-DP_heterodim
IPR036390WH_DNA-bd_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0046983protein dimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
Vocabulary: Cellular Component
TermDefinition
GO:0005667transcription regulator complex