Vfaba.Tiffany.R1.5g098720.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/TrEMBL
Match: tr|Q84NG0|Q84NG0_VICFA (Histone H1 (Fragment) OS=Vicia faba OX=3906 GN=his1-1 PE=3 SV=1) HSP 1 Score: 453.366 bits (1165), Expect = 3.935e-159 Identity = 273/284 (96.13%), Postives = 276/284 (97.18%), Query Frame = 0 Query: 3 SEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKIPAKTSAPKPAKKSAASKPKAKPKAKPAAKSKSKPAAKAKPAAKAKPAAKAKPAAKTKPAAKAKPAAKTKPAAKPVAKPAAKAKPAAKTKPAAKAKPAAKAKPAAKAKPAAKAARTSSRTTPGKAAAPKPAAKKAAPVKKTPVKAAAKAKTPVKKAAAKKAKK 286
SEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVAL+EKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKIPAK+SAPKPAKKSAASKPKAKPKAKPAAKSKS KPA KAKPAAKAKPAAKTKPAAKAKPAAKTKPAAKPVAKPAAKAKPAAKTKPAAKAKPAAKAKPAAKAKPAAKAARTSSRTTPGKAAAPKPAAKKAAPVKKTPVKAAAKAKTPVKKAAAK+ KK
Sbjct: 1 SEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVALREKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKIPAKSSAPKPAKKSAASKPKAKPKAKPAAKSKS------KPAVKAKPAAKAKPAAKTKPAAKAKPAAKTKPAAKPVAKPAAKAKPAAKTKPAAKAKPAAKAKPAAKAKPAAKAARTSSRTTPGKAAAPKPAAKKAAPVKKTPVKAAAKAKTPVKKAAAKRGKK 278
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/TrEMBL
Match: tr|Q9AT24|Q9AT24_PEA (Histone H1 (Fragment) OS=Pisum sativum OX=3888 GN=His1 PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 4.338e-67 Identity = 109/122 (89.34%), Postives = 116/122 (95.08%), Query Frame = 0 Query: 3 SEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKI 124
SEEPTTVAVEQPIVEEP AVDTLPPVVNESEEP AKPKKAPKE KAKKAPAKP+THPTYEEMVKEAIVALKE+ GSSQ+AIAKFIEEKHK LPSNFKK+LLVQ++KLVAS KLVKVKASYK+
Sbjct: 1 SEEPTTVAVEQPIVEEPEAVDTLPPVVNESEEPTAKPKKAPKETKAKKAPAKPRTHPTYEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/TrEMBL
Match: tr|Q84NF8|Q84NF8_9FABA (Histone H1 (Fragment) OS=Lens nigricans OX=41258 GN=his1-1 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.149e-57 Identity = 115/131 (87.79%), Postives = 124/131 (94.66%), Query Frame = 0 Query: 3 SEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKIPAKTSAPKP 133
SEEPTTVAVEQPIVEE AAVDTLPPVVNESEEP AKPKKA KEPKAKKAPAKP+THPTYEEMVK+AIV+LKEK GSSQ+AIAKFIEEK K LPSNFKK+LLVQ++KLVAS KLVKVKASYK+PAK+SAPKP
Sbjct: 1 SEEPTTVAVEQPIVEEQAAVDTLPPVVNESEEPTAKPKKAAKEPKAKKAPAKPRTHPTYEEMVKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKLPAKSSAPKP 131
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/TrEMBL
Match: tr|Q9SXQ8|Q9SXQ8_PEA (Ribosome-sedimenting protein OS=Pisum sativum OX=3888 GN=RSP PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 3.143e-56 Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 0 Query: 1 MASEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKI 124
MASEEPTTVAVEQPIVEEP AVDT PPVVNESEEP AKPKKAPKEPKAKKAPAKP+THPTYEEMVKEAIVALKE+ GSSQ+AIAKFIEEKHK LPSNFKK+LLVQ+RKLVAS KLVKVKASYK+
Sbjct: 1 MASEEPTTVAVEQPIVEEPEAVDTFPPVVNESEEPTAKPKKAPKEPKAKKAPAKPRTHPTYEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIRKLVASGKLVKVKASYKL 124
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/TrEMBL
Match: tr|Q9ZR20|Q9ZR20_PEA (Ribosome-sedimenting protein (Fragment) OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.520e-54 Identity = 110/122 (90.16%), Postives = 116/122 (95.08%), Query Frame = 0 Query: 3 SEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKI 124
SEEPTTVAVEQPIVEEP AVDT PPVVNESEEP AKPKKAPKEPKAKKAPAKP+THPTYEEMVKEAIVALKE+ GSSQ+AIAKFIEEKHK LPSNFKK+LLVQ+RKLVAS KLVKVKASYK+
Sbjct: 1 SEEPTTVAVEQPIVEEPEAVDTFPPVVNESEEPTAKPKKAPKEPKAKKAPAKPRTHPTYEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIRKLVASGKLVKVKASYKL 122
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/TrEMBL
Match: tr|Q8LKH9|Q8LKH9_9FABA (Histone H1 (Fragment) OS=Pisum fulvum OX=51020 GN=His1 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 4.662e-54 Identity = 110/122 (90.16%), Postives = 117/122 (95.90%), Query Frame = 0 Query: 3 SEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKI 124
SEEPTTVAVEQPIVEEP AVDTLPPVVNESEEP AKPKKAPKEPKAKKAPAKP+THPTYEEMVKEAIVALKE+ GSSQ+AIAKFIEEKHK LPSNFKK+LLVQ++KLVAS KLVKVKASYK+
Sbjct: 1 SEEPTTVAVEQPIVEEPEAVDTLPPVVNESEEPTAKPKKAPKEPKAKKAPAKPRTHPTYEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/TrEMBL
Match: tr|Q8LKI0|Q8LKI0_9FABA (Histone H1 (Fragment) OS=Pisum abyssinicum OX=198035 GN=His1 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 4.662e-54 Identity = 110/122 (90.16%), Postives = 117/122 (95.90%), Query Frame = 0 Query: 3 SEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKI 124
SEEPTTVAVEQPIVEEP AVDTLPPVVNESEEP AKPKKAPKEPKAKKAPAKP+THPTYEEMVKEAIVALKE+ GSSQ+AIAKFIEEKHK LPSNFKK+LLVQ++KLVAS KLVKVKASYK+
Sbjct: 1 SEEPTTVAVEQPIVEEPEAVDTLPPVVNESEEPTAKPKKAPKEPKAKKAPAKPRTHPTYEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/TrEMBL
Match: tr|Q9AT25|Q9AT25_PEA (Histone H1 (Fragment) OS=Pisum sativum OX=3888 GN=His1 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 4.795e-54 Identity = 110/122 (90.16%), Postives = 117/122 (95.90%), Query Frame = 0 Query: 3 SEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKI 124
SEEPTTVAVEQPIVEEP AVDTLPPVVNESEEP AKPKKAPKEPKAKKAPAKP+THPTYEEMVKEAIVALKE+ GSSQ+AIAKFIEEKHK LPSNFKK+LLVQ++KLVAS KLVKVKASYK+
Sbjct: 1 SEEPTTVAVEQPIVEEPEAVDTLPPVVNESEEPTAKPKKAPKEPKAKKAPAKPRTHPTYEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/TrEMBL
Match: tr|Q9AT23|Q9AT23_PEA (Histone H1 (Fragment) OS=Pisum sativum OX=3888 GN=His1 PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.602e-53 Identity = 109/122 (89.34%), Postives = 116/122 (95.08%), Query Frame = 0 Query: 3 SEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKI 124
SEEPTTVAVEQPIVEEP AVDTLPPVVNESEEP AKPKKAPKEPKAKKAPAKP+THPTYEEMVKEAIVALKE+ GSSQ+AIAKFIEEKH LPSNFKK+LLVQ++KLVAS KLVKVKASYK+
Sbjct: 1 SEEPTTVAVEQPIVEEPEAVDTLPPVVNESEEPTAKPKKAPKEPKAKKAPAKPRTHPTYEEMVKEAIVALKERNGSSQYAIAKFIEEKHTQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/TrEMBL
Match: tr|Q9AT22|Q9AT22_LATSA (Histone H1 (Fragment) OS=Lathyrus sativus OX=3860 GN=His1 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.512e-52 Identity = 115/127 (90.55%), Postives = 125/127 (98.43%), Query Frame = 0 Query: 3 SEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKIPAKTS 129
SEEPTTVAVEQPIVEEPAAVDTLPPVVNE+EEPAAKPKKAPKEPKAKKAPAKP+THPTYEEMVKEAIVALKEK+GSSQ+AIAKFIEEKHK LPSNFKK+LLVQ++KLVAS KLVKVKASYK+PAK++
Sbjct: 1 SEEPTTVAVEQPIVEEPAAVDTLPPVVNEAEEPAAKPKKAPKEPKAKKAPAKPRTHPTYEEMVKEAIVALKEKSGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKLPAKST 127
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/Swiss-Prot
Match: sp|P26569|H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.426e-34 Identity = 63/89 (70.79%), Postives = 75/89 (84.27%), Query Frame = 0 Query: 51 APAKPKT---HPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKIPAKTSA--PKPA 134
AP K KT HPTYEEM+K+AIV LKE+TGSSQ+AI KFIEEKHK+LP F+K+LLV L++LVAS+KLVKVKAS+KIP+ SA PKPA
Sbjct: 52 APTKKKTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPA 140
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/Swiss-Prot
Match: sp|P37218|H1_SOLLC (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.104e-24 Identity = 78/132 (59.09%), Postives = 91/132 (68.94%), Query Frame = 0 Query: 1 MASEEPTTVAVEQPIVEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKA------KKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKIPA 126
MA+EEP V +VEE AA P V + P AK KA KE KA +K A P THP Y EM+K+AIV LKE+TGSSQHAI KFIEEK K+LPSNFKK+LL QL+K VAS+KLVKVK SYK+P+
Sbjct: 1 MATEEPVIV---NEVVEEQAA----PETVKDEANPPAKSGKAKKETKAKKPAAPRKRSATP-THPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSYKLPS 124
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/Swiss-Prot
Match: sp|P27806|H1_WHEAT (Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 3.741e-24 Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 0 Query: 51 APAKPKT---HPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHK-NLPSNFKKILLVQLRKLVASDKLVKVKASYKI 124
P KP+ HP+Y EMV EAI ALKE++GSS AI KFIE+KHK +LP+NF+KILL Q++KLVA+ KL KVK SYK+
Sbjct: 45 GPKKPRVTPAHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKL 122
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/Swiss-Prot
Match: sp|P40267|H1_SOLPN (Histone H1 OS=Solanum pennellii OX=28526 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.678e-22 Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = 0 Query: 16 VEEPAAVDTLPPVVNESEEPAAKPKKAPKEPKAKK-APAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKN-LPSNFKKILLVQLRKLVASDKLVKVKASYKI 124
VE P V P ++ +E A K P+ PK KK AK THP Y +M+KEA++AL EK GSS +A+AK++E+KHK+ LP+NF+KIL +QL+ A KL+K+KASYK+
Sbjct: 7 VENPTVVQR-PTEASKVKEQAPATDKKPRAPKEKKPKSAKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKL 116
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M5W4|H1_EUPES (Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.348e-19 Identity = 44/67 (65.67%), Postives = 57/67 (85.07%), Query Frame = 0 Query: 57 THPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYK 123
+HP++ EM+ +AI LKE+TGSSQ+AI KF+E+KHK LPSNF+K+LL L+KLVAS KLVKVK S+K
Sbjct: 50 SHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFK 116
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/Swiss-Prot
Match: sp|P54671|H1_DICDI (Histone H1 OS=Dictyostelium discoideum OX=44689 GN=H1 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 4.841e-14 Identity = 41/87 (47.13%), Postives = 51/87 (58.62%), Query Frame = 0 Query: 41 KAPKEPKAKKAPAKPK---THPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKI 124
KAP P K A K K HPTY+ M+ AI K++TGSSQ AI K+IE + P FK L + L++LVA L VKASYK+
Sbjct: 4 KAPTTPTKKAAATKSKPKPNHPTYQVMISTAIAHYKDRTGSSQPAIIKYIEANYNVAPDTFKTQLKLALKRLVAKGTLTMVKASYKL 90
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q08864|H11_VOLCA (Histone H1-I OS=Volvox carteri OX=3067 GN=H1-I PE=2 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 5.546e-14 Identity = 50/102 (49.02%), Postives = 62/102 (60.78%), Query Frame = 0 Query: 57 THPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKH-KNLPS-NFKKILLVQLRKLVASDKLVKVKASYKIP------AKTSAPKPAKKSAASKPKAKPKAKP 150
THP Y EMVK+AI LKE+ GSS A+ KFIE K+ K++ NF K L ++ V KLVKVK S+K+ AK S PK AK +KPK K +AKP
Sbjct: 58 THPPYIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKVKGSFKLSEALKAKAKKSTPKKAKADGEAKPK-KSEAKP 158
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/Swiss-Prot
Match: sp|P23444|H1_MAIZE (Histone H1 OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.287e-13 Identity = 59/131 (45.04%), Postives = 70/131 (53.44%), Query Frame = 0 Query: 57 THPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHK-NLPSNFKKILLVQLRKLVASDKLVKVKASYKIPAKTSAPKPAKKSAASKPKAKPKAKPAAKSKSKPAAKAKPAAKAKPAAKAKPAAKTKPAAKA 186
TH Y EMV EAI +LKE+TGSS +AIAKF+E+KHK LP NF+K+L VQL+KLVA KL KVK SYK+ + T K + KA KAK AK KPA K
Sbjct: 49 THLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLSSATKPNPKPKAAPKK------------------PKTGAKKPKAAAKPKAKTPAKAKPATKP 161
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8W119|SMH4_MAIZE (Single myb histone 4 OS=Zea mays OX=4577 GN=SMH4 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 3.714e-10 Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 0 Query: 47 KAKKAPAKPKTHPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKIPAKTSAPKPAKKSAASKPKAKPKAKPAAKSK 155
A+K P KT P Y M+ EA++ L E GS AI FIE+++ P+ F++ L +LR+L S+K+ K+ SY++P + PA + AS PK K +KP+ SK
Sbjct: 103 DAEKKPQDGKTLPKYGAMIMEALLELNEPNGSDIAAIFGFIEQRYAVQPT-FRRFLASKLRRLADSNKIEKIDKSYRLPDSLATRTPAPMN-ASAPKQKDPSKPSKVSK 209
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. Araport11
Match: AT2G30620.2 (| winged-helix DNA-binding transcription factor family protein | Chr2:13045360-13046267 FORWARD LENGTH=202 | 201606) HSP 1 Score: 127.102 bits (318), Expect = 1.678e-35 Identity = 63/89 (70.79%), Postives = 75/89 (84.27%), Query Frame = 0 Query: 51 APAKPKT---HPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKIPAKTSA--PKPA 134
AP K KT HPTYEEM+K+AIV LKE+TGSSQ+AI KFIEEKHK+LP F+K+LLV L++LVAS+KLVKVKAS+KIP+ SA PKPA
Sbjct: 52 APTKKKTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPA 140
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. Araport11
Match: AT2G30620.1 (| winged-helix DNA-binding transcription factor family protein | Chr2:13045360-13046267 FORWARD LENGTH=273 | 201606) HSP 1 Score: 127.872 bits (320), Expect = 5.552e-35 Identity = 63/89 (70.79%), Postives = 75/89 (84.27%), Query Frame = 0 Query: 51 APAKPKT---HPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKIPAKTSA--PKPA 134
AP K KT HPTYEEM+K+AIV LKE+TGSSQ+AI KFIEEKHK+LP F+K+LLV L++LVAS+KLVKVKAS+KIP+ SA PKPA
Sbjct: 52 APTKKKTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPA 140
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. Araport11
Match: AT2G18050.1 (| histone H1-3 | Chr2:7846095-7846670 FORWARD LENGTH=167 | 201606) HSP 1 Score: 85.8853 bits (211), Expect = 2.645e-20 Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 0 Query: 36 AAKPKKAPKEPKAKKAPAKPKT--HPTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKN-LPSNFKKILLVQLRKLVASDKLVKVKASYKIPAKT 128
A+ K K P AKK P KPKT HP Y +M+KEA++ LKEK GSS +AIAK IEEKHK+ LP +F+K L +QL+ VA KLVK++ASYK+ T
Sbjct: 1 MAEDKILKKTPAAKK-PRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTT 95
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. Araport11
Match: AT2G18050.2 (| histone H1-3 | Chr2:7846254-7846670 FORWARD LENGTH=138 | 201606) HSP 1 Score: 73.9442 bits (180), Expect = 4.457e-16 Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 64 MVKEAIVALKEKTGSSQHAIAKFIEEKHKN-LPSNFKKILLVQLRKLVASDKLVKVKASYKIPAKT 128
M+KEA++ LKEK GSS +AIAK IEEKHK+ LP +F+K L +QL+ VA KLVK++ASYK+ T
Sbjct: 1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTT 66
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. Araport11
Match: AT1G72740.2 (| Homeodomain-like/winged-helix DNA-binding family protein | Chr1:27380499-27382687 REVERSE LENGTH=281 | 201606) HSP 1 Score: 62.003 bits (149), Expect = 6.245e-11 Identity = 33/79 (41.77%), Postives = 48/79 (60.76%), Query Frame = 0 Query: 59 PTYEEMVKEAIVALKEKTGSSQHAIAKFIEEKHKNLPSNFKKILLVQLRKLVASDKLVKVKASYKIP----AKTSAPKP 133
P Y+ ++ EA+ AL + GS +I FIE +H+ +P NF++IL +LR+L A KL K++ YKIP K PKP
Sbjct: 121 PRYDGVIFEALSALADGNGSDVSSIYHFIEPRHE-VPPNFRRILSTRLRRLAAQSKLEKIQNFYKIPDPSGTKIGVPKP 198 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 9 Position : 0 Zoom : x 1
BLAST of Vfaba.Tiffany.R1.5g098720.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.5g098720.1_tif_v1 ID=Vfaba.Tiffany.R1.5g098720.1_tif_v1; Name=Vfaba.Tiffany.R1.5g098720.1; organism=Vicia faba; type=mRNA; length=861bpback to top protein sequence of Vfaba.Tiffany.R1.5g098720.1_tif_v1 >Vfaba.Tiffany.R1.5g098720.1_tif_v1 ID=Vfaba.Tiffany.R1.5g098720.1_tif_v1; Name=Vfaba.Tiffany.R1.5g098720.1_tif_v1; organism=Vicia faba; type=polypeptide; length=286bpback to top mRNA from alignment at chr5:880377549..880378498+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.5g098720.1_tif_v1 ID=Vfaba.Tiffany.R1.5g098720.1_tif_v1; Name=Vfaba.Tiffany.R1.5g098720.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:880377549..880378498+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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