Vfaba.Hedin2.R1.2g166520.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NPS7|A0A2K3NPS7_TRIPR (Threonyl-tRNA synthetase OS=Trifolium pratense OX=57577 GN=L195_g001464 PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.302e-88 Identity = 129/139 (92.81%), Postives = 135/139 (97.12%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ +PEN LGDD TW+RAE+ALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYAL+
Sbjct: 191 LSTKPENALGDDATWERAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALQ 329
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MYJ2|A0A2Z6MYJ2_TRISU (Threonyl-tRNA synthetase OS=Trifolium subterraneum OX=3900 GN=TSUD_220650 PE=3 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.102e-85 Identity = 130/139 (93.53%), Postives = 135/139 (97.12%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ +PEN LGD ETWDRAE+ALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYAL+
Sbjct: 468 LSTKPENALGDTETWDRAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALQ 606
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1QRQ5|A0A4P1QRQ5_LUPAN (Threonyl-tRNA synthetase OS=Lupinus angustifolius OX=3871 GN=TanjilG_20748 PE=3 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 2.659e-83 Identity = 128/139 (92.09%), Postives = 134/139 (96.40%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ RPE LGD ETWD+AE+ALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDAL+RKFQCATLQLDFQLP+RFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYALK
Sbjct: 473 LSTRPEKYLGDLETWDKAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALNRKFQCATLQLDFQLPNRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALK 611
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MXX8|A0A6A5MXX8_LUPAL (Threonyl-tRNA synthetase OS=Lupinus albus OX=3870 GN=Lal_00007761 PE=3 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 3.151e-83 Identity = 128/139 (92.09%), Postives = 134/139 (96.40%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ RPE LGD ETWD+AE+ALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDAL+RKFQCATLQLDFQLP+RFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYALK
Sbjct: 475 LSTRPEKYLGDLETWDKAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALNRKFQCATLQLDFQLPNRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALK 613
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XK38|A0A1S2XK38_CICAR (Threonyl-tRNA synthetase OS=Cicer arietinum OX=3827 GN=LOC101507141 PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 3.801e-83 Identity = 128/139 (92.09%), Postives = 134/139 (96.40%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ RPE LGD ETW++AE++LKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYALK
Sbjct: 502 LSTRPEKYLGDIETWEKAENSLKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALK 640
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4P5U2|A0A6A4P5U2_LUPAL (Threonyl-tRNA synthetase OS=Lupinus albus OX=3870 GN=Lalb_Chr16g0382401 PE=3 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 4.910e-83 Identity = 128/139 (92.09%), Postives = 134/139 (96.40%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ RPE LGD ETWD+AE+ALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDAL+RKFQCATLQLDFQLP+RFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYALK
Sbjct: 500 LSTRPEKYLGDLETWDKAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALNRKFQCATLQLDFQLPNRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALK 638
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PRR8|A0A0B2PRR8_GLYSO (Threonyl-tRNA synthetase OS=Glycine soja OX=3848 GN=glysoja_039381 PE=3 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 7.860e-83 Identity = 126/139 (90.65%), Postives = 133/139 (95.68%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ RPE LGD TWD+AESALKEALD+FGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAI+CPVSEKSQ+YAL+
Sbjct: 382 LSTRPEKYLGDIATWDKAESALKEALDDFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYALQ 520
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|V7CJK2|V7CJK2_PHAVU (Threonyl-tRNA synthetase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G072800g PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.539e-82 Identity = 127/139 (91.37%), Postives = 133/139 (95.68%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ RPE LGD TWD+AESALKEALD+FGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAI+CPVSEKSQAYAL+
Sbjct: 490 LSTRPEKYLGDIATWDKAESALKEALDDFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQAYALQ 628
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|I1JC08|I1JC08_SOYBN (Threonyl-tRNA synthetase OS=Glycine max OX=3847 GN=100802879 PE=3 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 6.288e-82 Identity = 126/139 (90.65%), Postives = 132/139 (94.96%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ RPE LGD TWD+AESALKEALD+FGKPWQLNEGDGAFYGPKIDISVSDAL RKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAI+CPVSEKSQAYAL+
Sbjct: 493 LSTRPEKYLGDIATWDKAESALKEALDDFGKPWQLNEGDGAFYGPKIDISVSDALGRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQAYALQ 631
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LYA9|A0A445LYA9_GLYSO (Threonyl-tRNA synthetase OS=Glycine soja OX=3848 GN=D0Y65_000321 PE=3 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 6.446e-82 Identity = 126/139 (90.65%), Postives = 133/139 (95.68%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ RPE LGD TWD+AESALKEALD+FGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAI+CPVSEKSQ+YAL+
Sbjct: 500 LSTRPEKYLGDIATWDKAESALKEALDDFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYALQ 638
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|O04630|SYTM1_ARATH (Threonine--tRNA ligase, mitochondrial 1 OS=Arabidopsis thaliana OX=3702 GN=THRRS PE=1 SV=3) HSP 1 Score: 238.424 bits (607), Expect = 2.047e-72 Identity = 109/139 (78.42%), Postives = 124/139 (89.21%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ RPE LGD ETWD+AE+ LKEA++ FGKP LNEGDGAFYGPKIDI+VSDA++RKFQCATLQLDFQLP RF LE++AEDEAK RPVMIHRA+LGSVERMFAILLEHYKGKWPFW++PRQAI+CP+SEKSQ YA K
Sbjct: 492 LSTRPEKYLGDLETWDKAEADLKEAIEAFGKPLVLNEGDGAFYGPKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMFAILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEK 630
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GZ45|SYTC_ARATH (Probable threonine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At1g17960 PE=2 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 4.533e-60 Identity = 91/137 (66.42%), Postives = 116/137 (84.67%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYA 244
+ RP++ +GD ETW +AE+ L++ALD+FGKPW + EGDGAFYGPKIDI+VSDA +RKFQCAT+QLDFQLP FKL++ +E + ++E PVMIH A+LGS+ERMFAILLEHYKG WPFWL+PRQAI+C +SE +YA
Sbjct: 238 LSTRPKDHIGDLETWAKAENDLEKALDDFGKPWVIKEGDGAFYGPKIDITVSDARNRKFQCATIQLDFQLPACFKLKYLSE-KNEMEAPVMIHSAVLGSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSEDCSSYA 373
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|P04801|SYTC_YEAST (Threonine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=THS1 PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.806e-55 Identity = 93/159 (58.49%), Postives = 114/159 (71.70%), Query Frame = 0 Query: 94 NLFNSLETTAAI------CFVCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDE--AKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYA 244
N+FN L+ + + RPE +G ETWD AES L+ AL ++G W++N GDGAFYGPKIDI +SDAL R QCAT+QLDFQLP+RF+LEF ++D+ ERPVMIHRAILGSVERM AIL EH+ GKWPFWL+PRQ ++ PV K Q YA
Sbjct: 485 NIFNFLQYIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYA 643
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|P87144|SYTC_SCHPO (Threonine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ths1 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 2.760e-53 Identity = 92/150 (61.33%), Postives = 107/150 (71.33%), Query Frame = 0 Query: 108 VCNRPENK-LGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEA----------KIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ RPE K LGD TWD+AE+ LK ALD G W+LN GDGAFYGPKIDI+V DAL R+ QCAT+QLDFQLP+RF+LEF A A K RPVM+HRAILGS+ERM AIL EHY GKWPFW++PRQ + PVS + YA K
Sbjct: 466 LSTRPEEKYLGDLATWDKAEAQLKAALDASGYKWELNAGDGAFYGPKIDITVFDALKRQHQCATIQLDFQLPERFQLEFHAPASAEEAKESGNNNKYTRPVMVHRAILGSLERMIAILTEHYAGKWPFWMSPRQVCIIPVSAAAYNYADK 615
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8BLY2|SYTC2_MOUSE (Threonine--tRNA ligase 2, cytoplasmic OS=Mus musculus OX=10090 GN=Tars3 PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.255e-52 Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 0 Query: 83 MAKRLPKEM--LINLFNSLETTAAICFVCN---RPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
M +++ +E+ ++ S+ +T F N RPE+ LG+ E WD AE L+ +L EFGKPW++N GDGAFYGPKIDI + DA+ R QCAT+QLDFQLP RF L + ++D RPV+IHRAILGSVERM AIL E+Y GKWP WL+PRQ ++ PV + YAL+
Sbjct: 535 MVEQIEEEIKGCLHFLQSVYSTFGFSFQLNLSTRPEHFLGEIEIWDEAERQLQNSLVEFGKPWKINPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPACENYALQ 703
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2RTX5|SYTC2_HUMAN (Threonine--tRNA ligase 2, cytoplasmic OS=Homo sapiens OX=9606 GN=TARS3 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.884e-52 Identity = 86/157 (54.78%), Postives = 111/157 (70.70%), Query Frame = 0 Query: 93 INLFNSLETTAAICFVCN---RPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ S+ +T F N RPEN LG+ E W+ AE L+ +L +FG+PW++N GDGAFYGPKIDI + DA+ R QCAT+QLDFQLP RF L + ++D +RPV+IHRAILGSVERM AIL E+Y GKWPFWL+PRQ ++ PV + YAL+
Sbjct: 559 LQFLQSVYSTFGFSFQLNLSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWKMNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQ 715
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q54J66|SYTC1_DICDI (Probable threonine--tRNA ligase 1, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=thrS1 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 2.951e-52 Identity = 84/148 (56.76%), Postives = 112/148 (75.68%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKI-ERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALKGLESPADG 254
+ RP+N LG+ WD AE++L++AL++FGKPW+LN DGAFYGPKIDI ++D L R QCAT+QLDFQLP RF LE+ ++D A++ +RPV+IHRAILGSVERM AIL+EH GKWP W++PRQAI+ V++ Y K + +D
Sbjct: 492 LSTRPDNFLGEIAQWDIAEASLEKALNKFGKPWKLNPKDGAFYGPKIDIHITDCLKRSHQCATIQLDFQLPIRFDLEYQSDDAAELKKRPVIIHRAILGSVERMMAILIEHTGGKWPLWVSPRQAIVVTVNKTHNEYGQKVCKEISDA 639
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|A6QNM8|SYTC2_BOVIN (Threonine--tRNA ligase 2, cytoplasmic OS=Bos taurus OX=9913 GN=TARS3 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.137e-52 Identity = 88/160 (55.00%), Postives = 111/160 (69.38%), Query Frame = 0 Query: 93 INLFNSLETTAAICFVCN---RPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALKGLE 249
+ S+ +T F N RPEN LG E WD AE L+ +L EFGKPW++N G+GAFYGPKID+ + DAL R QCAT+QLDFQLP RF L + ++D + PV+IH+AILGSVERM AIL E+Y GKWPFWL+PRQ ++ PV + YAL+ LE
Sbjct: 557 LQFLQSVYSTFGFSFQLNLSTRPENFLGKIELWDEAEKQLQNSLMEFGKPWKINPGEGAFYGPKIDLEIKDALGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKNPVIIHQAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQWLE 716
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|P26639|SYTC_HUMAN (Threonine--tRNA ligase 1, cytoplasmic OS=Homo sapiens OX=9606 GN=TARS1 PE=1 SV=3) HSP 1 Score: 184.111 bits (466), Expect = 3.923e-52 Identity = 84/148 (56.76%), Postives = 105/148 (70.95%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALKGLESPADGR 255
+ RPE LGD E WD+AE L+ +L+EFG+ W+LN GDGAFYGPKIDI + DA+ R QCAT+QLDFQLP RF L + + D +RPV++HRAILGSVERM AIL E+Y GKWPFWL+PRQ ++ PV YA K + D +
Sbjct: 498 LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAK 645
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q0V9S0|SYTC2_XENTR (Threonine--tRNA ligase 2, cytoplasmic OS=Xenopus tropicalis OX=8364 GN=tars3 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 8.017e-52 Identity = 82/137 (59.85%), Postives = 103/137 (75.18%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYA 244
+ RPEN LG+ E W+ AE L+ +L++FG+PW+LN GDGAFYGPKIDI + DA+ R QCAT+QLDFQLP RF L + ++D +RPV+IHRAILGSVERM AIL E+Y GKWPFWL+PRQ ++ PV YA
Sbjct: 589 LSTRPENYLGEIEIWNEAEKQLESSLNQFGEPWKLNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILCENYGGKWPFWLSPRQVMVIPVGPSCDEYA 725
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT5G26830.1 (| Threonyl-tRNA synthetase | Chr5:9437351-9441568 FORWARD LENGTH=709 | 201606) HSP 1 Score: 238.424 bits (607), Expect = 2.094e-73 Identity = 109/139 (78.42%), Postives = 124/139 (89.21%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+ RPE LGD ETWD+AE+ LKEA++ FGKP LNEGDGAFYGPKIDI+VSDA++RKFQCATLQLDFQLP RF LE++AEDEAK RPVMIHRA+LGSVERMFAILLEHYKGKWPFW++PRQAI+CP+SEKSQ YA K
Sbjct: 492 LSTRPEKYLGDLETWDKAEADLKEAIEAFGKPLVLNEGDGAFYGPKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMFAILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEK 630
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G17960.2 (| Threonyl-tRNA synthetase | Chr1:6181015-6183737 REVERSE LENGTH=385 | 201606) HSP 1 Score: 201.06 bits (510), Expect = 3.220e-62 Identity = 91/137 (66.42%), Postives = 116/137 (84.67%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYA 244
+ RP++ +GD ETW +AE+ L++ALD+FGKPW + EGDGAFYGPKIDI+VSDA +RKFQCAT+QLDFQLP FKL++ +E + ++E PVMIH A+LGS+ERMFAILLEHYKG WPFWL+PRQAI+C +SE +YA
Sbjct: 165 LSTRPKDHIGDLETWAKAENDLEKALDDFGKPWVIKEGDGAFYGPKIDITVSDARNRKFQCATIQLDFQLPACFKLKYLSE-KNEMEAPVMIHSAVLGSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSEDCSSYA 300
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G17960.1 (| Threonyl-tRNA synthetase | Chr1:6181015-6183737 REVERSE LENGTH=458 | 201606) HSP 1 Score: 200.29 bits (508), Expect = 4.637e-61 Identity = 91/137 (66.42%), Postives = 116/137 (84.67%), Query Frame = 0 Query: 108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYA 244
+ RP++ +GD ETW +AE+ L++ALD+FGKPW + EGDGAFYGPKIDI+VSDA +RKFQCAT+QLDFQLP FKL++ +E + ++E PVMIH A+LGS+ERMFAILLEHYKG WPFWL+PRQAI+C +SE +YA
Sbjct: 238 LSTRPKDHIGDLETWAKAENDLEKALDDFGKPWVIKEGDGAFYGPKIDITVSDARNRKFQCATIQLDFQLPACFKLKYLSE-KNEMEAPVMIHSAVLGSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSEDCSSYA 373
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT2G04842.2 (| threonyl-tRNA synthetase%2C putative / threonine-tRNA ligase | Chr2:1698466-1701271 REVERSE LENGTH=650 | 201606) HSP 1 Score: 156.377 bits (394), Expect = 2.718e-43 Identity = 73/162 (45.06%), Postives = 108/162 (66.67%), Query Frame = 0 Query: 78 KDSVEMAKRLPKEMLINL-FNSLETTAAICFVCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSE 238
KD + L +E+L FN E + RPE +G D+ W++A AL++ALD+ G ++++EG GAFYGPKID+ + DAL RK+QC+T+Q+DF LP RF + + + K +RP+MIHRA+LGS+ER F +L+EHY G +P WL+P Q + PV++
Sbjct: 407 KDEIRGVLDLTEEILSRFGFNKYEVN-----LSTRPEKSVGGDDIWEKATCALRDALDDKGWSYEVDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDTNSDK-KRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQVRVLPVTD 562
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT2G04842.1 (| threonyl-tRNA synthetase%2C putative / threonine-tRNA ligase | Chr2:1698466-1701271 REVERSE LENGTH=650 | 201606) HSP 1 Score: 156.377 bits (394), Expect = 2.718e-43 Identity = 73/162 (45.06%), Postives = 108/162 (66.67%), Query Frame = 0 Query: 78 KDSVEMAKRLPKEMLINL-FNSLETTAAICFVCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSE 238
KD + L +E+L FN E + RPE +G D+ W++A AL++ALD+ G ++++EG GAFYGPKID+ + DAL RK+QC+T+Q+DF LP RF + + + K +RP+MIHRA+LGS+ER F +L+EHY G +P WL+P Q + PV++
Sbjct: 407 KDEIRGVLDLTEEILSRFGFNKYEVN-----LSTRPEKSVGGDDIWEKATCALRDALDDKGWSYEVDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDTNSDK-KRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQVRVLPVTD 562
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G18130.1 (| Class II aaRS and biotin synthetases superfamily protein | Chr1:6235895-6238799 FORWARD LENGTH=165 | 201606) HSP 1 Score: 117.087 bits (292), Expect = 3.412e-32 Identity = 52/74 (70.27%), Postives = 63/74 (85.14%), Query Frame = 0 Query: 173 LDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
+DF L DRFKLE+SAE+E IER V+IHRA+L SVER+FAILLE YKGK+PFWL+PRQAI+C VSE ++YA K
Sbjct: 17 VDFHLRDRFKLEYSAENETMIERSVLIHRAVLSSVERLFAILLEQYKGKFPFWLSPRQAIVCSVSEDYRSYADK 90
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G50410.4 (| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | Chr1:18672828-18676890 FORWARD LENGTH=883 | 201606) HSP 1 Score: 98.2117 bits (243), Expect = 9.582e-23 Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0 Query: 43 TVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKRLPKEMLINLFNSLETTAAICFVCNRP 112
T+NQNYANILLMLLRLRQACDHP LVK YNSD VGK S E K+LPKE L++L + LE++ IC VC+ P
Sbjct: 617 TLNQNYANILLMLLRLRQACDHPQLVKRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESS-PICCVCHDP 685
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G50410.3 (| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | Chr1:18672828-18677365 FORWARD LENGTH=981 | 201606) HSP 1 Score: 97.8265 bits (242), Expect = 1.136e-22 Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0 Query: 43 TVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKRLPKEMLINLFNSLETTAAICFVCNRP 112
T+NQNYANILLMLLRLRQACDHP LVK YNSD VGK S E K+LPKE L++L + LE++ IC VC+ P
Sbjct: 617 TLNQNYANILLMLLRLRQACDHPQLVKRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESS-PICCVCHDP 685
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G50410.2 (| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | Chr1:18672828-18677365 FORWARD LENGTH=981 | 201606) HSP 1 Score: 97.8265 bits (242), Expect = 1.136e-22 Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0 Query: 43 TVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKRLPKEMLINLFNSLETTAAICFVCNRP 112
T+NQNYANILLMLLRLRQACDHP LVK YNSD VGK S E K+LPKE L++L + LE++ IC VC+ P
Sbjct: 617 TLNQNYANILLMLLRLRQACDHPQLVKRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESS-PICCVCHDP 685
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G50410.1 (| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | Chr1:18672828-18677365 FORWARD LENGTH=981 | 201606) HSP 1 Score: 97.8265 bits (242), Expect = 1.136e-22 Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0 Query: 43 TVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKRLPKEMLINLFNSLETTAAICFVCNRP 112
T+NQNYANILLMLLRLRQACDHP LVK YNSD VGK S E K+LPKE L++L + LE++ IC VC+ P
Sbjct: 617 TLNQNYANILLMLLRLRQACDHPQLVKRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESS-PICCVCHDP 685 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.2g166520.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g166520.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g166520.1; organism=Vicia faba; type=mRNA; length=825bpback to top protein sequence of Vfaba.Hedin2.R1.2g166520.1_vfh_v1 >Vfaba.Hedin2.R1.2g166520.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g166520.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g166520.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=274bpback to top mRNA from alignment at chr2:1042476916..1042480297+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.2g166520.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g166520.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g166520.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1042476916..1042480297+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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