Vfaba.Hedin2.R1.2g166520.1

Transcript Overview
NameVfaba.Hedin2.R1.2g166520.1
Unique NameVfaba.Hedin2.R1.2g166520.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length825
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr2chromosomechr2:1042476916..1042480297 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR204Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR218Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR230Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL034Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL208Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL213Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL728Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL784Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL283Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL394Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL402Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL500Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL622Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crvfhL052Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvfhL056Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL013Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL329Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL795Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL833Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL472Pisum sativum Cameor genome v1aPisum sativum
psvfhL499Pisum sativum Cameor genome v1aPisum sativum
tifvfhL144Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL212Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR230Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR231Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR268Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR301Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR308Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvfhL0329Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0373Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0521Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0739Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0745Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR265Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR271Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR296Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR314Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvssR230Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR259Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR268Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR270Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR288Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvfhL347Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL353Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL592Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL596Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL746Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL810Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL238Cicer arietinum
carvfhL327Cicer arietinum
carvfhL351Cicer arietinum
ccavfhL488Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL598Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL609Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR272Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR305Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR323Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR255Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR279Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR290Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL137Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL233Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL266Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL349Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR245Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR277Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR296Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL013Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL778Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL814Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR211Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR249Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR285Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR287Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.2g134680.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g166520Vfaba.Hedin2.R1.2g166520_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-exonVfaba.Hedin2.R1.2g166520.1_vfh_v1-exon-chr2_vfh_v1:1042476916..1042477024Vicia fabaexon
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-exonVfaba.Hedin2.R1.2g166520.1_vfh_v1-exon-chr2_vfh_v1:1042478646..1042478866Vicia fabaexon
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-exonVfaba.Hedin2.R1.2g166520.1_vfh_v1-exon-chr2_vfh_v1:1042479271..1042479363Vicia fabaexon
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-exonVfaba.Hedin2.R1.2g166520.1_vfh_v1-exon-chr2_vfh_v1:1042479528..1042479620Vicia fabaexon
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-exonVfaba.Hedin2.R1.2g166520.1_vfh_v1-exon-chr2_vfh_v1:1042479707..1042479928Vicia fabaexon
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-exonVfaba.Hedin2.R1.2g166520.1_vfh_v1-exon-chr2_vfh_v1:1042480211..1042480297Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-cdsVfaba.Hedin2.R1.2g166520.1_vfh_v1-cds-chr2_vfh_v1:1042476916..1042477024Vicia fabaCDS
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-cdsVfaba.Hedin2.R1.2g166520.1_vfh_v1-cds-chr2_vfh_v1:1042478646..1042478866Vicia fabaCDS
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-cdsVfaba.Hedin2.R1.2g166520.1_vfh_v1-cds-chr2_vfh_v1:1042479271..1042479363Vicia fabaCDS
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-cdsVfaba.Hedin2.R1.2g166520.1_vfh_v1-cds-chr2_vfh_v1:1042479528..1042479620Vicia fabaCDS
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-cdsVfaba.Hedin2.R1.2g166520.1_vfh_v1-cds-chr2_vfh_v1:1042479707..1042479928Vicia fabaCDS
Vfaba.Hedin2.R1.2g166520.1_vfh_v1-cdsVfaba.Hedin2.R1.2g166520.1_vfh_v1-cds-chr2_vfh_v1:1042480211..1042480297Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g166520.1_vfh_v1Vfaba.Hedin2.R1.2g166520.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.2g166520.1_vfh_v1Vfaba.Hedin2.R1.2g166520.1_vfh_v1-proteinVicia fabapolypeptide


Homology
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NPS7|A0A2K3NPS7_TRIPR (Threonyl-tRNA synthetase OS=Trifolium pratense OX=57577 GN=L195_g001464 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.302e-88
Identity = 129/139 (92.81%), Postives = 135/139 (97.12%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  +PEN LGDD TW+RAE+ALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYAL+
Sbjct:  191 LSTKPENALGDDATWERAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALQ 329
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MYJ2|A0A2Z6MYJ2_TRISU (Threonyl-tRNA synthetase OS=Trifolium subterraneum OX=3900 GN=TSUD_220650 PE=3 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.102e-85
Identity = 130/139 (93.53%), Postives = 135/139 (97.12%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  +PEN LGD ETWDRAE+ALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYAL+
Sbjct:  468 LSTKPENALGDTETWDRAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALQ 606
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1QRQ5|A0A4P1QRQ5_LUPAN (Threonyl-tRNA synthetase OS=Lupinus angustifolius OX=3871 GN=TanjilG_20748 PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 2.659e-83
Identity = 128/139 (92.09%), Postives = 134/139 (96.40%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  RPE  LGD ETWD+AE+ALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDAL+RKFQCATLQLDFQLP+RFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYALK
Sbjct:  473 LSTRPEKYLGDLETWDKAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALNRKFQCATLQLDFQLPNRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALK 611
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MXX8|A0A6A5MXX8_LUPAL (Threonyl-tRNA synthetase OS=Lupinus albus OX=3870 GN=Lal_00007761 PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 3.151e-83
Identity = 128/139 (92.09%), Postives = 134/139 (96.40%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  RPE  LGD ETWD+AE+ALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDAL+RKFQCATLQLDFQLP+RFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYALK
Sbjct:  475 LSTRPEKYLGDLETWDKAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALNRKFQCATLQLDFQLPNRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALK 613
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XK38|A0A1S2XK38_CICAR (Threonyl-tRNA synthetase OS=Cicer arietinum OX=3827 GN=LOC101507141 PE=3 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 3.801e-83
Identity = 128/139 (92.09%), Postives = 134/139 (96.40%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  RPE  LGD ETW++AE++LKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYALK
Sbjct:  502 LSTRPEKYLGDIETWEKAENSLKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALK 640
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4P5U2|A0A6A4P5U2_LUPAL (Threonyl-tRNA synthetase OS=Lupinus albus OX=3870 GN=Lalb_Chr16g0382401 PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 4.910e-83
Identity = 128/139 (92.09%), Postives = 134/139 (96.40%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  RPE  LGD ETWD+AE+ALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDAL+RKFQCATLQLDFQLP+RFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAILCPVSEKSQAYALK
Sbjct:  500 LSTRPEKYLGDLETWDKAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALNRKFQCATLQLDFQLPNRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALK 638
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PRR8|A0A0B2PRR8_GLYSO (Threonyl-tRNA synthetase OS=Glycine soja OX=3848 GN=glysoja_039381 PE=3 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 7.860e-83
Identity = 126/139 (90.65%), Postives = 133/139 (95.68%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  RPE  LGD  TWD+AESALKEALD+FGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAI+CPVSEKSQ+YAL+
Sbjct:  382 LSTRPEKYLGDIATWDKAESALKEALDDFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYALQ 520
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|V7CJK2|V7CJK2_PHAVU (Threonyl-tRNA synthetase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G072800g PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 1.539e-82
Identity = 127/139 (91.37%), Postives = 133/139 (95.68%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  RPE  LGD  TWD+AESALKEALD+FGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAI+CPVSEKSQAYAL+
Sbjct:  490 LSTRPEKYLGDIATWDKAESALKEALDDFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQAYALQ 628
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|I1JC08|I1JC08_SOYBN (Threonyl-tRNA synthetase OS=Glycine max OX=3847 GN=100802879 PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 6.288e-82
Identity = 126/139 (90.65%), Postives = 132/139 (94.96%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  RPE  LGD  TWD+AESALKEALD+FGKPWQLNEGDGAFYGPKIDISVSDAL RKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAI+CPVSEKSQAYAL+
Sbjct:  493 LSTRPEKYLGDIATWDKAESALKEALDDFGKPWQLNEGDGAFYGPKIDISVSDALGRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQAYALQ 631
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LYA9|A0A445LYA9_GLYSO (Threonyl-tRNA synthetase OS=Glycine soja OX=3848 GN=D0Y65_000321 PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 6.446e-82
Identity = 126/139 (90.65%), Postives = 133/139 (95.68%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  RPE  LGD  TWD+AESALKEALD+FGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWL+PRQAI+CPVSEKSQ+YAL+
Sbjct:  500 LSTRPEKYLGDIATWDKAESALKEALDDFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYALQ 638
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|O04630|SYTM1_ARATH (Threonine--tRNA ligase, mitochondrial 1 OS=Arabidopsis thaliana OX=3702 GN=THRRS PE=1 SV=3)

HSP 1 Score: 238.424 bits (607), Expect = 2.047e-72
Identity = 109/139 (78.42%), Postives = 124/139 (89.21%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  RPE  LGD ETWD+AE+ LKEA++ FGKP  LNEGDGAFYGPKIDI+VSDA++RKFQCATLQLDFQLP RF LE++AEDEAK  RPVMIHRA+LGSVERMFAILLEHYKGKWPFW++PRQAI+CP+SEKSQ YA K
Sbjct:  492 LSTRPEKYLGDLETWDKAEADLKEAIEAFGKPLVLNEGDGAFYGPKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMFAILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEK 630
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GZ45|SYTC_ARATH (Probable threonine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At1g17960 PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 4.533e-60
Identity = 91/137 (66.42%), Postives = 116/137 (84.67%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYA 244
            +  RP++ +GD ETW +AE+ L++ALD+FGKPW + EGDGAFYGPKIDI+VSDA +RKFQCAT+QLDFQLP  FKL++ +E + ++E PVMIH A+LGS+ERMFAILLEHYKG WPFWL+PRQAI+C +SE   +YA
Sbjct:  238 LSTRPKDHIGDLETWAKAENDLEKALDDFGKPWVIKEGDGAFYGPKIDITVSDARNRKFQCATIQLDFQLPACFKLKYLSE-KNEMEAPVMIHSAVLGSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSEDCSSYA 373
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|P04801|SYTC_YEAST (Threonine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=THS1 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.806e-55
Identity = 93/159 (58.49%), Postives = 114/159 (71.70%), Query Frame = 0 
Query:   94 NLFNSLETTAAI------CFVCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDE--AKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYA 244
            N+FN L+    +        +  RPE  +G  ETWD AES L+ AL ++G  W++N GDGAFYGPKIDI +SDAL R  QCAT+QLDFQLP+RF+LEF ++D+     ERPVMIHRAILGSVERM AIL EH+ GKWPFWL+PRQ ++ PV  K Q YA
Sbjct:  485 NIFNFLQYIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYA 643
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|P87144|SYTC_SCHPO (Threonine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ths1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.760e-53
Identity = 92/150 (61.33%), Postives = 107/150 (71.33%), Query Frame = 0 
Query:  108 VCNRPENK-LGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEA----------KIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  RPE K LGD  TWD+AE+ LK ALD  G  W+LN GDGAFYGPKIDI+V DAL R+ QCAT+QLDFQLP+RF+LEF A   A          K  RPVM+HRAILGS+ERM AIL EHY GKWPFW++PRQ  + PVS  +  YA K
Sbjct:  466 LSTRPEEKYLGDLATWDKAEAQLKAALDASGYKWELNAGDGAFYGPKIDITVFDALKRQHQCATIQLDFQLPERFQLEFHAPASAEEAKESGNNNKYTRPVMVHRAILGSLERMIAILTEHYAGKWPFWMSPRQVCIIPVSAAAYNYADK 615
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8BLY2|SYTC2_MOUSE (Threonine--tRNA ligase 2, cytoplasmic OS=Mus musculus OX=10090 GN=Tars3 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.255e-52
Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 0 
Query:   83 MAKRLPKEM--LINLFNSLETTAAICFVCN---RPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            M +++ +E+   ++   S+ +T    F  N   RPE+ LG+ E WD AE  L+ +L EFGKPW++N GDGAFYGPKIDI + DA+ R  QCAT+QLDFQLP RF L + ++D     RPV+IHRAILGSVERM AIL E+Y GKWP WL+PRQ ++ PV    + YAL+
Sbjct:  535 MVEQIEEEIKGCLHFLQSVYSTFGFSFQLNLSTRPEHFLGEIEIWDEAERQLQNSLVEFGKPWKINPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPACENYALQ 703
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2RTX5|SYTC2_HUMAN (Threonine--tRNA ligase 2, cytoplasmic OS=Homo sapiens OX=9606 GN=TARS3 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.884e-52
Identity = 86/157 (54.78%), Postives = 111/157 (70.70%), Query Frame = 0 
Query:   93 INLFNSLETTAAICFVCN---RPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +    S+ +T    F  N   RPEN LG+ E W+ AE  L+ +L +FG+PW++N GDGAFYGPKIDI + DA+ R  QCAT+QLDFQLP RF L + ++D    +RPV+IHRAILGSVERM AIL E+Y GKWPFWL+PRQ ++ PV    + YAL+
Sbjct:  559 LQFLQSVYSTFGFSFQLNLSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWKMNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQ 715
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q54J66|SYTC1_DICDI (Probable threonine--tRNA ligase 1, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=thrS1 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 2.951e-52
Identity = 84/148 (56.76%), Postives = 112/148 (75.68%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKI-ERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALKGLESPADG 254
            +  RP+N LG+   WD AE++L++AL++FGKPW+LN  DGAFYGPKIDI ++D L R  QCAT+QLDFQLP RF LE+ ++D A++ +RPV+IHRAILGSVERM AIL+EH  GKWP W++PRQAI+  V++    Y  K  +  +D 
Sbjct:  492 LSTRPDNFLGEIAQWDIAEASLEKALNKFGKPWKLNPKDGAFYGPKIDIHITDCLKRSHQCATIQLDFQLPIRFDLEYQSDDAAELKKRPVIIHRAILGSVERMMAILIEHTGGKWPLWVSPRQAIVVTVNKTHNEYGQKVCKEISDA 639
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|A6QNM8|SYTC2_BOVIN (Threonine--tRNA ligase 2, cytoplasmic OS=Bos taurus OX=9913 GN=TARS3 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.137e-52
Identity = 88/160 (55.00%), Postives = 111/160 (69.38%), Query Frame = 0 
Query:   93 INLFNSLETTAAICFVCN---RPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALKGLE 249
            +    S+ +T    F  N   RPEN LG  E WD AE  L+ +L EFGKPW++N G+GAFYGPKID+ + DAL R  QCAT+QLDFQLP RF L + ++D    + PV+IH+AILGSVERM AIL E+Y GKWPFWL+PRQ ++ PV    + YAL+ LE
Sbjct:  557 LQFLQSVYSTFGFSFQLNLSTRPENFLGKIELWDEAEKQLQNSLMEFGKPWKINPGEGAFYGPKIDLEIKDALGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKNPVIIHQAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQWLE 716
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|P26639|SYTC_HUMAN (Threonine--tRNA ligase 1, cytoplasmic OS=Homo sapiens OX=9606 GN=TARS1 PE=1 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 3.923e-52
Identity = 84/148 (56.76%), Postives = 105/148 (70.95%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALKGLESPADGR 255
            +  RPE  LGD E WD+AE  L+ +L+EFG+ W+LN GDGAFYGPKIDI + DA+ R  QCAT+QLDFQLP RF L + + D    +RPV++HRAILGSVERM AIL E+Y GKWPFWL+PRQ ++ PV      YA K  +   D +
Sbjct:  498 LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAK 645
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q0V9S0|SYTC2_XENTR (Threonine--tRNA ligase 2, cytoplasmic OS=Xenopus tropicalis OX=8364 GN=tars3 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.017e-52
Identity = 82/137 (59.85%), Postives = 103/137 (75.18%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYA 244
            +  RPEN LG+ E W+ AE  L+ +L++FG+PW+LN GDGAFYGPKIDI + DA+ R  QCAT+QLDFQLP RF L + ++D    +RPV+IHRAILGSVERM AIL E+Y GKWPFWL+PRQ ++ PV      YA
Sbjct:  589 LSTRPENYLGEIEIWNEAEKQLESSLNQFGEPWKLNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILCENYGGKWPFWLSPRQVMVIPVGPSCDEYA 725
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT5G26830.1 (| Threonyl-tRNA synthetase | Chr5:9437351-9441568 FORWARD LENGTH=709 | 201606)

HSP 1 Score: 238.424 bits (607), Expect = 2.094e-73
Identity = 109/139 (78.42%), Postives = 124/139 (89.21%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +  RPE  LGD ETWD+AE+ LKEA++ FGKP  LNEGDGAFYGPKIDI+VSDA++RKFQCATLQLDFQLP RF LE++AEDEAK  RPVMIHRA+LGSVERMFAILLEHYKGKWPFW++PRQAI+CP+SEKSQ YA K
Sbjct:  492 LSTRPEKYLGDLETWDKAEADLKEAIEAFGKPLVLNEGDGAFYGPKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMFAILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEK 630
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G17960.2 (| Threonyl-tRNA synthetase | Chr1:6181015-6183737 REVERSE LENGTH=385 | 201606)

HSP 1 Score: 201.06 bits (510), Expect = 3.220e-62
Identity = 91/137 (66.42%), Postives = 116/137 (84.67%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYA 244
            +  RP++ +GD ETW +AE+ L++ALD+FGKPW + EGDGAFYGPKIDI+VSDA +RKFQCAT+QLDFQLP  FKL++ +E + ++E PVMIH A+LGS+ERMFAILLEHYKG WPFWL+PRQAI+C +SE   +YA
Sbjct:  165 LSTRPKDHIGDLETWAKAENDLEKALDDFGKPWVIKEGDGAFYGPKIDITVSDARNRKFQCATIQLDFQLPACFKLKYLSE-KNEMEAPVMIHSAVLGSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSEDCSSYA 300
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G17960.1 (| Threonyl-tRNA synthetase | Chr1:6181015-6183737 REVERSE LENGTH=458 | 201606)

HSP 1 Score: 200.29 bits (508), Expect = 4.637e-61
Identity = 91/137 (66.42%), Postives = 116/137 (84.67%), Query Frame = 0 
Query:  108 VCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYA 244
            +  RP++ +GD ETW +AE+ L++ALD+FGKPW + EGDGAFYGPKIDI+VSDA +RKFQCAT+QLDFQLP  FKL++ +E + ++E PVMIH A+LGS+ERMFAILLEHYKG WPFWL+PRQAI+C +SE   +YA
Sbjct:  238 LSTRPKDHIGDLETWAKAENDLEKALDDFGKPWVIKEGDGAFYGPKIDITVSDARNRKFQCATIQLDFQLPACFKLKYLSE-KNEMEAPVMIHSAVLGSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSEDCSSYA 373
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT2G04842.2 (| threonyl-tRNA synthetase%2C putative / threonine-tRNA ligase | Chr2:1698466-1701271 REVERSE LENGTH=650 | 201606)

HSP 1 Score: 156.377 bits (394), Expect = 2.718e-43
Identity = 73/162 (45.06%), Postives = 108/162 (66.67%), Query Frame = 0 
Query:   78 KDSVEMAKRLPKEMLINL-FNSLETTAAICFVCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSE 238
            KD +     L +E+L    FN  E       +  RPE  +G D+ W++A  AL++ALD+ G  ++++EG GAFYGPKID+ + DAL RK+QC+T+Q+DF LP RF + +   +  K +RP+MIHRA+LGS+ER F +L+EHY G +P WL+P Q  + PV++
Sbjct:  407 KDEIRGVLDLTEEILSRFGFNKYEVN-----LSTRPEKSVGGDDIWEKATCALRDALDDKGWSYEVDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDTNSDK-KRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQVRVLPVTD 562
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT2G04842.1 (| threonyl-tRNA synthetase%2C putative / threonine-tRNA ligase | Chr2:1698466-1701271 REVERSE LENGTH=650 | 201606)

HSP 1 Score: 156.377 bits (394), Expect = 2.718e-43
Identity = 73/162 (45.06%), Postives = 108/162 (66.67%), Query Frame = 0 
Query:   78 KDSVEMAKRLPKEMLINL-FNSLETTAAICFVCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSE 238
            KD +     L +E+L    FN  E       +  RPE  +G D+ W++A  AL++ALD+ G  ++++EG GAFYGPKID+ + DAL RK+QC+T+Q+DF LP RF + +   +  K +RP+MIHRA+LGS+ER F +L+EHY G +P WL+P Q  + PV++
Sbjct:  407 KDEIRGVLDLTEEILSRFGFNKYEVN-----LSTRPEKSVGGDDIWEKATCALRDALDDKGWSYEVDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDTNSDK-KRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQVRVLPVTD 562
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G18130.1 (| Class II aaRS and biotin synthetases superfamily protein | Chr1:6235895-6238799 FORWARD LENGTH=165 | 201606)

HSP 1 Score: 117.087 bits (292), Expect = 3.412e-32
Identity = 52/74 (70.27%), Postives = 63/74 (85.14%), Query Frame = 0 
Query:  173 LDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALK 246
            +DF L DRFKLE+SAE+E  IER V+IHRA+L SVER+FAILLE YKGK+PFWL+PRQAI+C VSE  ++YA K
Sbjct:   17 VDFHLRDRFKLEYSAENETMIERSVLIHRAVLSSVERLFAILLEQYKGKFPFWLSPRQAIVCSVSEDYRSYADK 90
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G50410.4 (| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | Chr1:18672828-18676890 FORWARD LENGTH=883 | 201606)

HSP 1 Score: 98.2117 bits (243), Expect = 9.582e-23
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0 
Query:   43 TVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKRLPKEMLINLFNSLETTAAICFVCNRP 112
            T+NQNYANILLMLLRLRQACDHP LVK YNSD VGK S E  K+LPKE L++L + LE++  IC VC+ P
Sbjct:  617 TLNQNYANILLMLLRLRQACDHPQLVKRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESS-PICCVCHDP 685
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G50410.3 (| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | Chr1:18672828-18677365 FORWARD LENGTH=981 | 201606)

HSP 1 Score: 97.8265 bits (242), Expect = 1.136e-22
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0 
Query:   43 TVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKRLPKEMLINLFNSLETTAAICFVCNRP 112
            T+NQNYANILLMLLRLRQACDHP LVK YNSD VGK S E  K+LPKE L++L + LE++  IC VC+ P
Sbjct:  617 TLNQNYANILLMLLRLRQACDHPQLVKRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESS-PICCVCHDP 685
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G50410.2 (| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | Chr1:18672828-18677365 FORWARD LENGTH=981 | 201606)

HSP 1 Score: 97.8265 bits (242), Expect = 1.136e-22
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0 
Query:   43 TVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKRLPKEMLINLFNSLETTAAICFVCNRP 112
            T+NQNYANILLMLLRLRQACDHP LVK YNSD VGK S E  K+LPKE L++L + LE++  IC VC+ P
Sbjct:  617 TLNQNYANILLMLLRLRQACDHPQLVKRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESS-PICCVCHDP 685
[Close]
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Match: AT1G50410.1 (| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | Chr1:18672828-18677365 FORWARD LENGTH=981 | 201606)

HSP 1 Score: 97.8265 bits (242), Expect = 1.136e-22
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0 
Query:   43 TVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKRLPKEMLINLFNSLETTAAICFVCNRP 112
            T+NQNYANILLMLLRLRQACDHP LVK YNSD VGK S E  K+LPKE L++L + LE++  IC VC+ P
Sbjct:  617 TLNQNYANILLMLLRLRQACDHPQLVKRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESS-PICCVCHDP 685
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2K3NPS7|A0A2K3NPS7_TRIPR2.302e-8892.81Threonyl-tRNA synthetase OS=Trifolium pratense OX=... [more]
tr|A0A2Z6MYJ2|A0A2Z6MYJ2_TRISU2.102e-8593.53Threonyl-tRNA synthetase OS=Trifolium subterraneum... [more]
tr|A0A4P1QRQ5|A0A4P1QRQ5_LUPAN2.659e-8392.09Threonyl-tRNA synthetase OS=Lupinus angustifolius ... [more]
tr|A0A6A5MXX8|A0A6A5MXX8_LUPAL3.151e-8392.09Threonyl-tRNA synthetase OS=Lupinus albus OX=3870 ... [more]
tr|A0A1S2XK38|A0A1S2XK38_CICAR3.801e-8392.09Threonyl-tRNA synthetase OS=Cicer arietinum OX=382... [more]
tr|A0A6A4P5U2|A0A6A4P5U2_LUPAL4.910e-8392.09Threonyl-tRNA synthetase OS=Lupinus albus OX=3870 ... [more]
tr|A0A0B2PRR8|A0A0B2PRR8_GLYSO7.860e-8390.65Threonyl-tRNA synthetase OS=Glycine soja OX=3848 G... [more]
tr|V7CJK2|V7CJK2_PHAVU1.539e-8291.37Threonyl-tRNA synthetase OS=Phaseolus vulgaris OX=... [more]
tr|I1JC08|I1JC08_SOYBN6.288e-8290.65Threonyl-tRNA synthetase OS=Glycine max OX=3847 GN... [more]
tr|A0A445LYA9|A0A445LYA9_GLYSO6.446e-8290.65Threonyl-tRNA synthetase OS=Glycine soja OX=3848 G... [more]
back to top
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|O04630|SYTM1_ARATH2.047e-7278.42Threonine--tRNA ligase, mitochondrial 1 OS=Arabido... [more]
sp|Q8GZ45|SYTC_ARATH4.533e-6066.42Probable threonine--tRNA ligase, cytoplasmic OS=Ar... [more]
sp|P04801|SYTC_YEAST1.806e-5558.49Threonine--tRNA ligase, cytoplasmic OS=Saccharomyc... [more]
sp|P87144|SYTC_SCHPO2.760e-5361.33Threonine--tRNA ligase, cytoplasmic OS=Schizosacch... [more]
sp|Q8BLY2|SYTC2_MOUSE1.255e-5252.66Threonine--tRNA ligase 2, cytoplasmic OS=Mus muscu... [more]
sp|A2RTX5|SYTC2_HUMAN2.884e-5254.78Threonine--tRNA ligase 2, cytoplasmic OS=Homo sapi... [more]
sp|Q54J66|SYTC1_DICDI2.951e-5256.76Probable threonine--tRNA ligase 1, cytoplasmic OS=... [more]
sp|A6QNM8|SYTC2_BOVIN3.137e-5255.00Threonine--tRNA ligase 2, cytoplasmic OS=Bos tauru... [more]
sp|P26639|SYTC_HUMAN3.923e-5256.76Threonine--tRNA ligase 1, cytoplasmic OS=Homo sapi... [more]
sp|Q0V9S0|SYTC2_XENTR8.017e-5259.85Threonine--tRNA ligase 2, cytoplasmic OS=Xenopus t... [more]
back to top
BLAST of Vfaba.Hedin2.R1.2g166520.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT5G26830.12.094e-7378.42| Threonyl-tRNA synthetase | Chr5:9437351-9441568 ... [more]
AT1G17960.23.220e-6266.42| Threonyl-tRNA synthetase | Chr1:6181015-6183737 ... [more]
AT1G17960.14.637e-6166.42| Threonyl-tRNA synthetase | Chr1:6181015-6183737 ... [more]
AT2G04842.22.718e-4345.06| threonyl-tRNA synthetase%2C putative / threonine... [more]
AT2G04842.12.718e-4345.06| threonyl-tRNA synthetase%2C putative / threonine... [more]
AT1G18130.13.412e-3270.27| Class II aaRS and biotin synthetases superfamily... [more]
AT1G50410.49.582e-2368.57| SNF2 domain-containing protein / helicase domain... [more]
AT1G50410.31.136e-2268.57| SNF2 domain-containing protein / helicase domain... [more]
AT1G50410.21.136e-2268.57| SNF2 domain-containing protein / helicase domain... [more]
AT1G50410.11.136e-2268.57| SNF2 domain-containing protein / helicase domain... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002320Threonine-tRNA ligase, class IIaPRINTSPR01047TRNASYNTHTHRcoord: 196..209
score: 73.47
coord: 152..180
score: 55.54
coord: 223..235
score: 50.27
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 114..218
e-value: 8.6E-11
score: 42.1
IPR036621Anticodon-binding domain superfamilyGENE3D3.40.50.800coord: 222..253
e-value: 2.2E-7
score: 32.9
IPR045864Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)GENE3D3.30.930.10Bira Bifunctional Protein; Domain 2coord: 77..221
e-value: 3.0E-54
score: 186.2
IPR045864Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)SUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 90..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..274
NoneNo IPR availablePANTHERPTHR11451THREONINE-TRNA LIGASEcoord: 110..246
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 216..246

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.2g166520.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g166520.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g166520.1; organism=Vicia faba; type=mRNA; length=825bp
ATGCGGAAGCGCGCATACGCTAGAAAGACGTATAAGCAAGCCTTTCTTTA
TGAGTATGAGTCAACCAAGCCGCTTCAGAGAGGTCCCTCAACTCTCTCAA
CAGTCCAAGGCATATGCTGCTGCCGTACAGTGAATCAAAACTATGCAAAT
ATTCTTTTGATGCTTTTACGTCTCCGTCAGGCTTGTGATCACCCACTTCT
TGTTAAAGAATACAATTCTGATCCTGTTGGAAAAGATTCTGTTGAAATGG
CAAAAAGGCTTCCAAAAGAGATGCTGATAAATCTGTTTAATAGTTTGGAA
ACAACTGCCGCTATATGTTTTGTCTGCAATAGGCCAGAGAATAAGCTTGG
AGATGATGAAACGTGGGATAGGGCTGAAAGTGCTCTCAAGGAGGCTTTGG
ATGAGTTTGGCAAGCCATGGCAGTTGAATGAAGGGGATGGTGCATTCTAT
GGACCAAAGATAGATATCAGTGTATCTGATGCATTGAGTAGGAAATTCCA
GTGTGCAACTCTACAGCTTGACTTCCAGCTTCCTGATCGTTTTAAGTTGG
AATTCTCAGCTGAGGATGAAGCCAAAATTGAGAGGCCTGTTATGATACAC
AGAGCCATTCTAGGATCAGTTGAACGCATGTTTGCCATACTTTTAGAGCA
CTACAAGGGTAAATGGCCCTTCTGGCTCAATCCTCGTCAAGCAATTTTGT
GCCCTGTTTCTGAGAAATCACAAGCTTATGCTCTGAAGGGATTGGAATCA
CCCGCTGATGGTAGACGTTCATCTGAGTCTAGCTACCGTATTGGAGATAA
TGGAACTTCAGGGGGGACAAATTAG
back to top

protein sequence of Vfaba.Hedin2.R1.2g166520.1_vfh_v1

>Vfaba.Hedin2.R1.2g166520.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g166520.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g166520.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=274bp
MRKRAYARKTYKQAFLYEYESTKPLQRGPSTLSTVQGICCCRTVNQNYAN
ILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKRLPKEMLINLFNSLE
TTAAICFVCNRPENKLGDDETWDRAESALKEALDEFGKPWQLNEGDGAFY
GPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIH
RAILGSVERMFAILLEHYKGKWPFWLNPRQAILCPVSEKSQAYALKGLES
PADGRRSSESSYRIGDNGTSGGTN
back to top

mRNA from alignment at chr2:1042476916..1042480297+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.2g166520.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g166520.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g166520.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1042476916..1042480297+ (Vicia faba
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002320Thr-tRNA-ligase_IIa
IPR002314aa-tRNA-synt_IIb
IPR036621Anticodon-bd_dom_sf
IPR045864aa-tRNA-synth_II/BPL/LPL
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004829threonine-tRNA ligase activity
GO:0005524ATP binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006435threonyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation