evm.model.Chr09.1261
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of evm.model.Chr09.1261 vs. UniProtKB/Swiss-Prot
Match: sp|P26861|RM06_MARPO (60S ribosomal protein L6, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL6 PE=3 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.692e-48 Identity = 70/100 (70.00%), Postives = 83/100 (83.00%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKK 100
MEAKFF FL+I+GVGYKA A G +LYLKLG+SHE+ L V P+VRVFC K N+ICCTG+D Q+V QFAA V++CKPPEVYKGKGI Y +E+I KKQGKK
Sbjct: 1 MEAKFFCFLEIIGVGYKASTNAQGSILYLKLGFSHEIRLQVTPSVRVFCLKPNLICCTGMDHQKVTQFAAIVKSCKPPEVYKGKGIQYRNEIIHKKQGKK 100
BLAST of evm.model.Chr09.1261 vs. UniProtKB/Swiss-Prot
Match: sp|Q38US6|RL6_LACSS (50S ribosomal protein L6 OS=Lactobacillus sakei subsp. sakei (strain 23K) OX=314315 GN=rplF PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.958e-26 Identity = 48/98 (48.98%), Postives = 63/98 (64.29%), Query Frame = 0 Query: 5 FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
F + L ++GVGY RA+ G+ L L +GYSH VE+ P V V N I +GI KQ+V QFAA +R +PPE YKGKGI Y DE +++K+GK K
Sbjct: 82 FKKTLDLIGVGY--RAQLKGKTLVLNVGYSHPVEMEAPEGVNVEVPSNTNIIISGISKQKVGQFAAEIRDVRPPEPYKGKGIRYTDEHVRRKEGKTGK 177
BLAST of evm.model.Chr09.1261 vs. UniProtKB/Swiss-Prot
Match: sp|P82193|RK6_SPIOL (50S ribosomal protein L6, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL6 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 3.609e-26 Identity = 48/98 (48.98%), Postives = 69/98 (70.41%), Query Frame = 0 Query: 5 FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
F + L++VGVGY+A E G+ L L LG+SH V +A+P ++V +N + +G DK V QFAAT+R+ +PPE YKGKG+ YVDEV+++K+GK K
Sbjct: 123 FEKKLQLVGVGYRATVE--GKDLILSLGFSHPVRMAIPDELQVKVEENTKVTVSGRDKSVVGQFAATIRSWRPPEPYKGKGVRYVDEVVRRKEGKAGK 218
BLAST of evm.model.Chr09.1261 vs. UniProtKB/Swiss-Prot
Match: sp|A7HM37|RL6_FERNB (50S ribosomal protein L6 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) OX=381764 GN=rplF PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.231e-25 Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 0 Query: 5 FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKS 101
F + L+IVGVGY RA+ G L + LGY+H+VE VP V+V N I +GIDKQRV Q AA +R + P Y GKGI YVDEV+K K+GKK+
Sbjct: 90 FKKELEIVGVGY--RAQLQGNKLIMNLGYAHQVEFDVPADVKVEVPAPNKIIVSGIDKQRVGQVAADIRKWREPNPYSGKGIKYVDEVLKLKEGKKA 184
BLAST of evm.model.Chr09.1261 vs. UniProtKB/Swiss-Prot
Match: sp|Q1GPB4|RL6_SPHAL (50S ribosomal protein L6 OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) OX=317655 GN=rplF PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.100e-25 Identity = 49/96 (51.04%), Postives = 63/96 (65.62%), Query Frame = 0 Query: 5 FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKK 100
F + L+I GVGY RA A G+ L L+LGYSH+V+ AVP + + N I +GIDKQ+V Q AA +R + PE YKGKGI Y E I +K+GKK
Sbjct: 83 FTKVLEITGVGY--RANAQGKNLKLQLGYSHDVDFAVPDGIEIKTPDNTTIEISGIDKQQVGQVAAEIRRWRKPEPYKGKGIKYRGEYIFRKEGKK 176
BLAST of evm.model.Chr09.1261 vs. UniProtKB/Swiss-Prot
Match: sp|B2IK77|RL6_BEII9 (50S ribosomal protein L6 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIMB 8712) OX=395963 GN=rplF PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.613e-25 Identity = 47/96 (48.96%), Postives = 61/96 (63.54%), Query Frame = 0 Query: 5 FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKK 100
F R L+I GVGYKA + G+ L L LGYSH++ +P + + K + TGIDKQRV Q AA +R +PPE YKGKG+ Y E I +K+GKK
Sbjct: 83 FERKLEITGVGYKAAVQ--GKNLQLSLGYSHDISFPIPDGIAIAAPKPTEVSITGIDKQRVGQIAAEIRALRPPEPYKGKGVKYAGEFIFRKEGKK 176
BLAST of evm.model.Chr09.1261 vs. UniProtKB/Swiss-Prot
Match: sp|B7IHW1|RL6_THEAB (50S ribosomal protein L6 OS=Thermosipho africanus (strain TCF52B) OX=484019 GN=rplF PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.468e-24 Identity = 48/97 (49.48%), Postives = 65/97 (67.01%), Query Frame = 0 Query: 5 FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKS 101
F + L+IVG+GY RA+ G+ L + LGY+H VE+ +P V+V N I +GIDKQRV Q AA +R + P VY GKGI YV EV++ K+GKK+
Sbjct: 90 FKKELEIVGIGY--RAQLQGKKLVMNLGYAHPVEMEIPSDVKVEVPSPNKIIVSGIDKQRVGQVAADIRKWREPNVYSGKGIRYVGEVVRLKEGKKA 184
BLAST of evm.model.Chr09.1261 vs. UniProtKB/Swiss-Prot
Match: sp|O23049|RK6_ARATH (50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL6 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.899e-24 Identity = 46/98 (46.94%), Postives = 66/98 (67.35%), Query Frame = 0 Query: 5 FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
F + L +VGVGY RA G+ L L LG+SH V++ +P +++V +N I +G DK + QFAATVR +PPE YKGKG+ Y DE++++K+GK K
Sbjct: 126 FEKKLILVGVGY--RATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDEIVRRKEGKAGK 221
BLAST of evm.model.Chr09.1261 vs. UniProtKB/Swiss-Prot
Match: sp|Q2N9C6|RL6_ERYLH (50S ribosomal protein L6 OS=Erythrobacter litoralis (strain HTCC2594) OX=314225 GN=rplF PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.557e-24 Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 0 Query: 5 FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKK 100
F + L+I GVGY RA+A G+ L L+LGYSH+V++AVP + V + +GIDKQ V Q AA +R + PE YKGKGI Y E + +K+GKK
Sbjct: 83 FSKTLEISGVGY--RAQAQGKTLKLQLGYSHDVDIAVPEGLEVKTPDQTTVIISGIDKQAVGQLAAEIRQWRKPEPYKGKGIKYQGEYVFRKEGKK 176
BLAST of evm.model.Chr09.1261 vs. UniProtKB/Swiss-Prot
Match: sp|Q3SSV1|RL6_NITWN (50S ribosomal protein L6 OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=rplF PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.073e-24 Identity = 49/96 (51.04%), Postives = 61/96 (63.54%), Query Frame = 0 Query: 5 FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKK 100
F + L+I+GVGY RA G+ L L LGYSH+V AVP + + K I TG D QRV Q AA +R +PPE YKGKG+ Y DE I +K+GKK
Sbjct: 83 FEKKLEIIGVGY--RAALQGKSLQLALGYSHDVNYAVPEGITIAVPKPTEITITGNDAQRVGQVAAEIRGYRPPEPYKGKGVKYADETIFRKEGKK 176
BLAST of evm.model.Chr09.1261 vs. Araport11
Match: AT2G18400.1 (| ribosomal protein L6 family protein | Chr2:7989665-7989973 REVERSE LENGTH=102 | 201606) HSP 1 Score: 182.57 bits (462), Expect = 2.711e-61 Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVI 93
MEAKFFRFLKIVGVGYKARAE AGR LYLKLGYSHEVELAVPPAVRVFCFKNNV+CCTGIDKQRVHQFAATVR+CKPPE YKGKGIMY DEV+
Sbjct: 1 MEAKFFRFLKIVGVGYKARAEEAGRFLYLKLGYSHEVELAVPPAVRVFCFKNNVVCCTGIDKQRVHQFAATVRSCKPPEPYKGKGIMYTDEVV 93
BLAST of evm.model.Chr09.1261 vs. Araport11
Match: AT1G05190.1 (| Ribosomal protein L6 family | Chr1:1502515-1503738 REVERSE LENGTH=223 | 201606) HSP 1 Score: 95.1301 bits (235), Expect = 1.943e-25 Identity = 46/98 (46.94%), Postives = 66/98 (67.35%), Query Frame = 0 Query: 5 FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
F + L +VGVGY RA G+ L L LG+SH V++ +P +++V +N I +G DK + QFAATVR +PPE YKGKG+ Y DE++++K+GK K
Sbjct: 126 FEKKLILVGVGY--RATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDEIVRRKEGKAGK 221
BLAST of evm.model.Chr09.1261 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N4G1|A0A4D6N4G1_VIGUN (Large subunit ribosomal protein L6 OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g2812 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 6.478e-68 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK
Sbjct: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
BLAST of evm.model.Chr09.1261 vs. UniProtKB/TrEMBL
Match: tr|I1LCL9|I1LCL9_SOYBN (Ribosomal_L6 domain-containing protein OS=Glycine max OX=3847 GN=100780944 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 6.478e-68 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK
Sbjct: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
BLAST of evm.model.Chr09.1261 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V9G3|A0A0L9V9G3_PHAAN (Ribosomal_L6 domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g029200 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 6.478e-68 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK
Sbjct: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
BLAST of evm.model.Chr09.1261 vs. UniProtKB/TrEMBL
Match: tr|A0A151RWF8|A0A151RWF8_CAJCA (Ribosomal_L6 domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_023095 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 6.478e-68 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK
Sbjct: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
BLAST of evm.model.Chr09.1261 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SP24|A0A0S3SP24_PHAAN (Ribosomal_L6 domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G123300 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 6.478e-68 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK
Sbjct: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
BLAST of evm.model.Chr09.1261 vs. UniProtKB/TrEMBL
Match: tr|A0A445IQ31|A0A445IQ31_GLYSO (60S ribosomal protein L6, mitochondrial (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_027564 PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.668e-67 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK
Sbjct: 53 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 154
BLAST of evm.model.Chr09.1261 vs. UniProtKB/TrEMBL
Match: tr|V7BEI5|V7BEI5_PHAVU (Ribosomal_L6 domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G139500g PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 2.419e-67 Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFA+TVRTCKPPEVYKGKGIMYVDEV+KKKQGKKSK
Sbjct: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFASTVRTCKPPEVYKGKGIMYVDEVVKKKQGKKSK 102
BLAST of evm.model.Chr09.1261 vs. UniProtKB/TrEMBL
Match: tr|I1KDT7|I1KDT7_SOYBN (Ribosomal_L6 domain-containing protein OS=Glycine max OX=3847 GN=100527168 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 2.419e-67 Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVEL VPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK
Sbjct: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
BLAST of evm.model.Chr09.1261 vs. UniProtKB/TrEMBL
Match: tr|C6T6I8|C6T6I8_SOYBN (Ribosomal_L6 domain-containing protein OS=Glycine max OX=3847 GN=100811303 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 4.053e-67 Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSH+VELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKG+MYVDEVIKKKQGKKSK
Sbjct: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHDVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGLMYVDEVIKKKQGKKSK 102
BLAST of evm.model.Chr09.1261 vs. UniProtKB/TrEMBL
Match: tr|C6T1H6|C6T1H6_SOYBN (Ribosomal_L6 domain-containing protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 8.741e-67 Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVIKKKQGKKSK 102
MEAKFFRFL+IVGVGYKARAEAAGRLLYLKLGYSH+VELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKG+MYVDEVIKKKQGKKSK
Sbjct: 1 MEAKFFRFLRIVGVGYKARAEAAGRLLYLKLGYSHDVELAVPPAVRVFCFKNNVICCTGIDKQRVHQFAATVRTCKPPEVYKGKGLMYVDEVIKKKQGKKSK 102 The following BLAST results are available for this feature:
BLAST of evm.model.Chr09.1261 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of evm.model.Chr09.1261 vs. Araport11
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11) Total hits: 2 Position : 0 Zoom : x 1
BLAST of evm.model.Chr09.1261 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.Chr09.1261_hau_v1 ID=evm.model.Chr09.1261_hau_v1; Name=evm.model.Chr09.1261; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=309bpback to top protein sequence of evm.model.Chr09.1261_hau_v1 >evm.model.Chr09.1261_hau_v1 ID=evm.model.Chr09.1261_hau_v1; Name=evm.model.Chr09.1261_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=102bpback to top mRNA from alignment at Chr09:20748744..20751623- Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>evm.model.Chr09.1261_hau_v1 ID=evm.model.Chr09.1261_hau_v1; Name=evm.model.Chr09.1261; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=2880bp; location=Sequence derived from: Chr09:20748744..20751623- (Vigna unguiculata subsp. sesquipedalisback to top Coding sequence (CDS) from alignment at Chr09:20748744..20751623- >evm.model.Chr09.1261_hau_v1 ID=evm.model.Chr09.1261_hau_v1; Name=evm.model.Chr09.1261; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=309bp; location=Sequence derived from: Chr09:20748744..20751623- (Vigna unguiculata subsp. sesquipedalisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|