Homology
BLAST of rna-XM_014638171.2 vs. Araport11
Match:
AT3G48140.1 (| B12D protein | Chr3:17778471-17779299 FORWARD LENGTH=88 | 201606)
HSP 1 Score: 130.183 bits (326), Expect = 4.706e-41
Identity = 57/86 (66.28%), Postives = 71/86 (82.56%), Query Frame = 0
Query: 3 ANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPS 88
A+RWL+PEVYPLFAA GVAVGIC L+RNIT NPEVR TK NRAAG+L+N EGEKY ++ LRK+VR + P+IMP +N FF++P+
Sbjct: 2 ASRWLRPEVYPLFAATGVAVGICAFSLIRNITGNPEVRCTKENRAAGILDNHAEGEKYKENFLRKFVRNKKPEIMPGLNKFFTDPT 87
BLAST of rna-XM_014638171.2 vs. Araport11
Match:
AT3G29970.1 (| B12D protein | Chr3:11745299-11746481 FORWARD LENGTH=87 | 201606)
HSP 1 Score: 107.071 bits (266), Expect = 7.120e-32
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 0
Query: 5 RWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
RW++PEVYPL A+G + QL RN NP+ R+ K +R G+LEN +EGEKY+QH RKY+R R PQ+MPS+N FFS+ N
Sbjct: 3 RWVRPEVYPLLGAMGFVTSMVVFQLTRNAFLNPDCRINKEHRKMGILENKDEGEKYAQHNFRKYLRTRQPQVMPSLNRFFSQEDN 87
BLAST of rna-XM_014638171.2 vs. Araport11
Match:
AT3G29970.3 (| B12D protein | Chr3:11746016-11746481 FORWARD LENGTH=72 | 201606)
HSP 1 Score: 85.5001 bits (210), Expect = 1.625e-23
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 0
Query: 18 VGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
+G + QL RN NP+ R+ K +R G+LEN +EGEKY+QH RKY+R R PQ+MPS+N FFS+ N
Sbjct: 1 MGFVTSMVVFQLTRNAFLNPDCRINKEHRKMGILENKDEGEKYAQHNFRKYLRTRQPQVMPSLNRFFSQEDN 72
BLAST of rna-XM_014638171.2 vs. Araport11
Match:
AT3G29970.2 (| B12D protein | Chr3:11746016-11746481 FORWARD LENGTH=72 | 201606)
HSP 1 Score: 85.5001 bits (210), Expect = 1.625e-23
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 0
Query: 18 VGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
+G + QL RN NP+ R+ K +R G+LEN +EGEKY+QH RKY+R R PQ+MPS+N FFS+ N
Sbjct: 1 MGFVTSMVVFQLTRNAFLNPDCRINKEHRKMGILENKDEGEKYAQHNFRKYLRTRQPQVMPSLNRFFSQEDN 72
BLAST of rna-XM_014638171.2 vs. UniProtKB/TrEMBL
Match:
tr|A0A1S3TIS1|A0A1S3TIS1_VIGRR (uncharacterized protein LOC106755937 OS=Vigna radiata var. radiata OX=3916 GN=LOC106755937 PE=4 SV=1)
HSP 1 Score: 185.267 bits (469), Expect = 2.854e-59
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
Query: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN
Sbjct: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
BLAST of rna-XM_014638171.2 vs. UniProtKB/TrEMBL
Match:
tr|A0A4D6NJK5|A0A4D6NJK5_VIGUN (NADH-ubiquinone reductase complex 1 MLRQ subunit OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g114 PE=4 SV=1)
HSP 1 Score: 183.726 bits (465), Expect = 1.054e-58
Identity = 87/89 (97.75%), Postives = 89/89 (100.00%), Query Frame = 0
Query: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVL+NFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFS+PSN
Sbjct: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLDNFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSDPSN 89
BLAST of rna-XM_014638171.2 vs. UniProtKB/TrEMBL
Match:
tr|A0A0S3S166|A0A0S3S166_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G425900 PE=4 SV=1)
HSP 1 Score: 182.185 bits (461), Expect = 4.493e-58
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0
Query: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
MAANRWL+PEVYPLFAAVG AVGICGMQLVRNITTNPEVRVTKSNRAAG+LENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN
Sbjct: 1 MAANRWLRPEVYPLFAAVGAAVGICGMQLVRNITTNPEVRVTKSNRAAGILENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
BLAST of rna-XM_014638171.2 vs. UniProtKB/TrEMBL
Match:
tr|A0A0L9UAL3|A0A0L9UAL3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g313300 PE=4 SV=1)
HSP 1 Score: 182.185 bits (461), Expect = 4.493e-58
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0
Query: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
MAANRWL+PEVYPLFAAVG AVGICGMQLVRNITTNPEVRVTKSNRAAG+LENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN
Sbjct: 1 MAANRWLRPEVYPLFAAVGAAVGICGMQLVRNITTNPEVRVTKSNRAAGILENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
BLAST of rna-XM_014638171.2 vs. UniProtKB/TrEMBL
Match:
tr|V7D215|V7D215_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G258900g PE=4 SV=1)
HSP 1 Score: 176.407 bits (446), Expect = 8.008e-56
Identity = 83/89 (93.26%), Postives = 86/89 (96.63%), Query Frame = 0
Query: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTK NRAAG+LENFEEGEKYS+H LRKYVRG+ PQIMPSVNNFFSEPSN
Sbjct: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKQNRAAGILENFEEGEKYSEHSLRKYVRGKNPQIMPSVNNFFSEPSN 89
BLAST of rna-XM_014638171.2 vs. UniProtKB/TrEMBL
Match:
tr|I1MYJ0|I1MYJ0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100500344 PE=4 SV=1)
HSP 1 Score: 175.252 bits (443), Expect = 2.622e-55
Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 0
Query: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTK NRAAG+LENF EGEKYSQH LRKYVRG+ PQIMPSVNNFFS+PSN
Sbjct: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKQNRAAGILENFAEGEKYSQHSLRKYVRGKQPQIMPSVNNFFSDPSN 89
BLAST of rna-XM_014638171.2 vs. UniProtKB/TrEMBL
Match:
tr|A0A0B2QRU1|A0A0B2QRU1_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_047161 PE=4 SV=1)
HSP 1 Score: 175.252 bits (443), Expect = 2.622e-55
Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 0
Query: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTK NRAAG+LENF EGEKYSQH LRKYVRG+ PQIMPSVNNFFS+PSN
Sbjct: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKQNRAAGILENFAEGEKYSQHSLRKYVRGKQPQIMPSVNNFFSDPSN 89
BLAST of rna-XM_014638171.2 vs. UniProtKB/TrEMBL
Match:
tr|C6T1F7|C6T1F7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)
HSP 1 Score: 174.866 bits (442), Expect = 4.392e-55
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0
Query: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTK NRAAG+LENF EGEKYSQH LRKYVRG+ PQ+MPSVNNFFS+PSN
Sbjct: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKQNRAAGILENFAEGEKYSQHSLRKYVRGKQPQVMPSVNNFFSDPSN 89
BLAST of rna-XM_014638171.2 vs. UniProtKB/TrEMBL
Match:
tr|I1LNB8|I1LNB8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100527541 PE=4 SV=1)
HSP 1 Score: 172.94 bits (437), Expect = 2.436e-54
Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 0
Query: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
MAANRWLKPEVYPLFA+VGVAVGICGMQLVRNITTNPEVRVTK NR AG+LENF EGEKYSQH LRKYVRG+ PQIMPSVNNFFS+PSN
Sbjct: 1 MAANRWLKPEVYPLFASVGVAVGICGMQLVRNITTNPEVRVTKQNRTAGILENFAEGEKYSQHSLRKYVRGKQPQIMPSVNNFFSDPSN 89
BLAST of rna-XM_014638171.2 vs. UniProtKB/TrEMBL
Match:
tr|A0A445HI47|A0A445HI47_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_037137 PE=4 SV=1)
HSP 1 Score: 171.785 bits (434), Expect = 5.550e-54
Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 0
Query: 1 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKSNRAAGVLENFEEGEKYSQHGLRKYVRGRTPQIMPSVNNFFSEPSN 89
MAANRWLKPEVYPLFA+VGVAVGICGMQLVRNITTNPEVRVTK NR AG+LENF EGEKYSQH LRKYVRG+ PQIMPSVNNFFS+PSN
Sbjct: 1 MAANRWLKPEVYPLFASVGVAVGICGMQLVRNITTNPEVRVTKRNRTAGILENFAEGEKYSQHSLRKYVRGKQPQIMPSVNNFFSDPSN 89
The following BLAST results are available for this feature:
BLAST of rna-XM_014638171.2 vs. Araport11
Analysis Date: 2023-06-20 (
Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11 )
Total hits: 4
20 40 60 80 100 120 140 160 180 200 220 240 260 Expect = 4.71e-41 / Id = 66.28 Expect = 7.12e-32 / Id = 52.94 Expect = 1.63e-23 / Id = 50.00 Expect = 1.63e-23 / Id = 50.00 Sequence AT3G48140.1 AT3G29970.1 AT3G29970.3 AT3G29970.2
Match Name E-value Identity Description
AT3G48140.1 4.706e-41 66.28 | B12D protein | Chr3:17778471-17779299 FORWARD LE... [more] AT3G29970.1 7.120e-32 52.94 | B12D protein | Chr3:11745299-11746481 FORWARD LE... [more] AT3G29970.3 1.625e-23 50.00 | B12D protein | Chr3:11746016-11746481 FORWARD LE... [more] AT3G29970.2 1.625e-23 50.00 | B12D protein | Chr3:11746016-11746481 FORWARD LE... [more]
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BLAST of rna-XM_014638171.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL )
Total hits: 10
20 40 60 80 100 120 140 160 180 200 220 240 260 Expect = 2.85e-59 / Id = 100.00 Expect = 1.05e-58 / Id = 97.75 Expect = 4.49e-58 / Id = 96.63 Expect = 4.49e-58 / Id = 96.63 Expect = 8.01e-56 / Id = 93.26 Expect = 2.62e-55 / Id = 92.13 Expect = 2.62e-55 / Id = 92.13 Expect = 4.39e-55 / Id = 91.01 Expect = 2.44e-54 / Id = 89.89 Expect = 5.55e-54 / Id = 89.89 Sequence tr|A0A1S3TIS1|A0A1S3TIS1_VIGRR tr|A0A4D6NJK5|A0A4D6NJK5_VIGUN tr|A0A0S3S166|A0A0S3S166_PHAAN tr|A0A0L9UAL3|A0A0L9UAL3_PHAAN tr|V7D215|V7D215_PHAVU tr|I1MYJ0|I1MYJ0_SOYBN tr|A0A0B2QRU1|A0A0B2QRU1_GLYSO tr|C6T1F7|C6T1F7_SOYBN tr|I1LNB8|I1LNB8_SOYBN tr|A0A445HI47|A0A445HI47_GLYSO back to top
Sequences
The
following sequences are available for this feature:
mRNA sequence
>rna-XM_014638171.2_VrVC1973A-SNU_v1 ID=rna-XM_014638171.2_VrVC1973A-SNU_v1; Name=rna-XM_014638171.2; organism=Vigna radiata; type=mRNA; length=270bp back to top protein sequence of rna-XM_014638171.2_VrVC1973A-SNU_v1
>rna-XM_014638171.2_VrVC1973A-SNU_v1 ID=rna-XM_014638171.2_VrVC1973A-SNU_v1; Name=rna-XM_014638171.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=89bp back to top mRNA from alignment at chr02:22359348..22360356+
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014638171.2_VrVC1973A-SNU_v1 ID=rna-XM_014638171.2_VrVC1973A-SNU_v1; Name=rna-XM_014638171.2; organism=Vigna radiata; type=mRNA; length=1009bp; location=Sequence derived from: chr02:22359348..22360356+ (Vigna radiataAACCAAGAAAGTAGAAACCCAACCATTCATTCACTtacaattcaagaaaa
acaaGCAATCGTTGACCAAATTCTTTGAATTTGGTAGCCAAATTTGTAGG
GTTTTTGCATGAACCATAAAATGGGCATGATTTTCGCATCACATTCACAC
ATATAAACCAGTTACCACATTCATCATTCCTCATTCAGTTTTGCTCCGCA
TCCTTCTTGTTAAGTTTCCTTGGAAGCGGAGCCTGTTTCTTGTTTTCTGT
TTCTCCTTCgttcaattttctcttttctgcaGCTTCTCTTCTCAACATGG
CCGCCAACAGATGGTTGAAACCTGAG GTATACCCACTCTTCGCTGCAG
TTGGTGTAGCTGTCGGGATCTGCGGTATGCAACTTGTGAGGAACATAACC
ACCAATCCTGAAGTCAG GGTGACCA
AGAGCAACAGAGCTGCAGGAGTTCTCGAGAACTTTGAGGAGGGAGAGAAA
TATTCACAACATGGTCTGAGGAAGTATGTTCGTGGGAGGACCCCTCAGAT
CATGCCATCCGTCAACAACTTCTTCTCTGAACCATCAAACTAA back to top Coding sequence (CDS) from alignment at chr02:22359348..22360356+
>rna-XM_014638171.2_VrVC1973A-SNU_v1 ID=rna-XM_014638171.2_VrVC1973A-SNU_v1; Name=rna-XM_014638171.2; organism=Vigna radiata; type=CDS; length=270bp; location=Sequence derived from: chr02:22359348..22360356+ (Vigna radiata back to top
