rna-XM_004497517.3
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-XM_004497517.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:900673-902719 REVERSE LENGTH=241) HSP 1 Score: 267.7 bits (683), Expect = 5.176e-91 Identity = 130/177 (73.45%), Postives = 146/177 (82.49%), Query Frame = 0 Query: 40 SGNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
+ +SK KK +R S VIDAV+DRKLPPELRG+R+ VRSETD+INVVEQRIWHSMEEG FE LPGKGKPL L TNPHADPAEDTLYRIL+KN APEWVELNKEIR++ EWR+SLKKAW K D S W E S+ LK +LK+IN+ VFRYNLIVPFGRQMFGLKWEKEI L+E
Sbjct: 65 TASSKRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRSETDIINVVEQRIWHSMEEGHFENLPGKGKPLNLHTNPHADPAEDTLYRILNKNGFAPEWVELNKEIRNKAKEWRVSLKKAWTMKLEEDQSGWEERSDLLKNELKQINNMVFRYNLIVPFGRQMFGLKWEKEIDRLKE 241
BLAST of rna-XM_004497517.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:901452-902719 REVERSE LENGTH=363) HSP 1 Score: 53.5286 bits (127), Expect = 2.630e-8 Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0 Query: 40 SGNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSE 80
+ +SK KK +R S VIDAV+DRKLPPELRG+R+ VRS+
Sbjct: 65 TASSKRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRSK 105
BLAST of rna-XM_004497517.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:901452-902719 REVERSE LENGTH=363) HSP 1 Score: 53.5286 bits (127), Expect = 2.630e-8 Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0 Query: 40 SGNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSE 80
+ +SK KK +R S VIDAV+DRKLPPELRG+R+ VRS+
Sbjct: 65 TASSKRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRSK 105
BLAST of rna-XM_004497517.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:901452-902719 REVERSE LENGTH=363) HSP 1 Score: 53.5286 bits (127), Expect = 2.630e-8 Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0 Query: 40 SGNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSE 80
+ +SK KK +R S VIDAV+DRKLPPELRG+R+ VRS+
Sbjct: 65 TASSKRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRSK 105
BLAST of rna-XM_004497517.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8VCE1|DJC28_MOUSE (DnaJ homolog subfamily C member 28 OS=Mus musculus OX=10090 GN=Dnajc28 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.657e-14 Identity = 48/137 (35.04%), Postives = 72/137 (52.55%), Query Frame = 0 Query: 86 VVEQRIWHSMEEGQFEKLPGKGKPLK-LDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSL---KKAWANKCS-GDHSVWVESSEALKLQLKEINDKVFRYNLIVP-FGRQMFGLKWEKEISYLEE 216
+VE I SM +G F+ L GKGKPLK + DP L RIL N PEW+ + KEI+ I + R +L +K N S + W + E + +++++N ++ +NLIVP RQ +KEI ++E
Sbjct: 203 LVEDLIQESMAKGDFDNLSGKGKPLKKFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLREALLMSRKKLGNPLSPTEQKQWAQVCEQFQEKIRKLNKRINDFNLIVPILTRQKVHFDAQKEIIRVQE 339
BLAST of rna-XM_004497517.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9NX36|DJC28_HUMAN (DnaJ homolog subfamily C member 28 OS=Homo sapiens OX=9606 GN=DNAJC28 PE=1 SV=2) HSP 1 Score: 65.0846 bits (157), Expect = 3.062e-11 Identity = 46/132 (34.85%), Postives = 65/132 (49.24%), Query Frame = 0 Query: 86 VVEQRIWHSMEEGQFEKLPGKGKPLKLDTN-PHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWR----MSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVP-FGRQMFGLKWEKEI 211
+VE I SM +G F+ L GKGKPLK ++ + DP L RIL N PEW+ KEI I + R +S KK + W E + ++++N ++ +NLIVP RQ +KEI
Sbjct: 203 LVEDLIQESMAKGDFDNLSGKGKPLKKFSDCSYIDPMTHNLNRILIDNGYQPEWILKQKEISDTIEQLREAILVSRKKLGNPMTPTEKKQWNHVCEQFQENIRKLNKRINDFNLIVPILTRQKVHFDAQKEI 334
BLAST of rna-XM_004497517.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y0X2|A0A1S2Y0X2_CICAR (Uncharacterized protein LOC101500104 OS=Cicer arietinum OX=3827 GN=LOC101500104 PE=4 SV=1) HSP 1 Score: 442.58 bits (1137), Expect = 5.156e-157 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0 Query: 1 MGSATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSSGNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
MGSATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSSGNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE
Sbjct: 1 MGSATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSSGNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
BLAST of rna-XM_004497517.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4W481|A0A9D4W481_PEA (DnaJ homologue subfamily C member 28 conserved domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_062088 PE=4 SV=1) HSP 1 Score: 365.155 bits (936), Expect = 6.913e-126 Identity = 186/219 (84.93%), Postives = 194/219 (88.58%), Query Frame = 0 Query: 1 MGSATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSS---GNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
M ATYLRL R SLN LSL NS +STVR+ SSSSS GN+KPD KKL DRLS+VIDAVNDRKLPPELRGQRN VRSETDLINVVEQRIWHSMEEGQFE LPGKGKPLKLDTNPHADPAEDTLYRILSKN CAPEWVELNKEIRSRIS+WR+SLKKAWANKCSGD S+WVESSEALK QLKEINDKVFRYNLIVPFGRQM GLKWEKE+ YLEE
Sbjct: 21 MSVATYLRLRRHASLNFLSLFHFHNSPLSTVRWSSSSSSPSSSGNTKPDKKKLGDRLSSVIDAVNDRKLPPELRGQRNVVRSETDLINVVEQRIWHSMEEGQFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSRISQWRVSLKKAWANKCSGDQSMWVESSEALKSQLKEINDKVFRYNLIVPFGRQMSGLKWEKELGYLEE 239
BLAST of rna-XM_004497517.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3N7A9|A0A2K3N7A9_TRIPR (DnaJ subfamily c member 28-like protein OS=Trifolium pratense OX=57577 GN=L195_g022168 PE=4 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 2.895e-122 Identity = 184/220 (83.64%), Postives = 196/220 (89.09%), Query Frame = 0 Query: 1 MGSATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSSGNS----KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
M ATYLRL R SLN LSLL NS +STVR+CSSSSSS ++ KPD KKL DRLS+VIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSME+GQFE LPGKGKPLKLDTNPHADPAEDTLYRILSKN CAPEW+ELNKEIRSRISEW++SLKKAWANK SGDHS+WVESSE LK QLKEIN+KVFRYNLIVPFGRQM GL WEKE+SYLEE
Sbjct: 1 MSMATYLRLGRCVSLNSLSLLHFHNSPLSTVRYCSSSSSSPSTSVKSKPDKKKLGDRLSSVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEDGQFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPEWIELNKEIRSRISEWKISLKKAWANKYSGDHSMWVESSEILKSQLKEINNKVFRYNLIVPFGRQMSGLNWEKELSYLEE 220
BLAST of rna-XM_004497517.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6P0V8|A0A2Z6P0V8_TRISU (DnaJ homologue subfamily C member 28 conserved domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_25560 PE=4 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 7.812e-122 Identity = 181/218 (83.03%), Postives = 192/218 (88.07%), Query Frame = 0 Query: 1 MGSATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSSGNS--KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
M ATYLR R SLN LSLL NS +STVR+ SSS S + KPD KKL DRLS+VIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSME+GQFE LPGKGKPLKLDTNPHADPAEDTLYRILSKN CAPEWVELNKEIRSRISEW++SLKKAW+NKCSGDHS+WVESSE LK QLK+INDKVFRYNLIVPFGRQM GL WEKE+SYLEE
Sbjct: 1 MMMATYLRFGRCVSLNSLSLLHFHNSPLSTVRYSSSSLPSSSVKSKPDKKKLGDRLSSVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEDGQFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSRISEWKISLKKAWSNKCSGDHSMWVESSEVLKSQLKQINDKVFRYNLIVPFGRQMSGLNWEKELSYLEE 218
BLAST of rna-XM_004497517.3 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MWQ7|A0A4D6MWQ7_VIGUN (Nucleobase:cation symporter-1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g881 PE=4 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 1.487e-113 Identity = 176/219 (80.37%), Postives = 185/219 (84.47%), Query Frame = 0 Query: 4 ATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSSGN-----SKPD-NKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
AT LRL F S+N L VST RF SSSSSS + KP KKL+DRL+ VIDAV+DRKLPPELRGQRNNVRSETD+INVVEQRIWHSMEEGQFE LPGKGKPLKLDTNPHADPAEDTLYRILSKN CAPEWVELNKEIRS+ISEWRMSLKKAWA KC GDHS WVESSE LKLQL+EINDKVFRYNLIVPFGRQMFGLKWEKE+ YLEE
Sbjct: 2 ATCLRLRGFTSINSRDLF------VSTARFSSSSSSSSSSSSSSGKPKTGKKLMDRLTAVIDAVHDRKLPPELRGQRNNVRSETDIINVVEQRIWHSMEEGQFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSKISEWRMSLKKAWATKCGGDHSEWVESSENLKLQLREINDKVFRYNLIVPFGRQMFGLKWEKELGYLEE 214
BLAST of rna-XM_004497517.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2RXA7|A0A0B2RXA7_GLYSO (DnaJ-like subfamily C member 28 OS=Glycine soja OX=3848 GN=D0Y65_026176 PE=4 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 6.497e-113 Identity = 176/223 (78.92%), Postives = 187/223 (83.86%), Query Frame = 0 Query: 4 ATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSS----------GNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
AT LRL RF +++ LSL VST RF SSSSS G SK KKL+DRLS VIDAVNDRKLPPELRGQR+NVRSETD+INVVEQRIWH+MEEG+FE LPGKGKPLKLDTNPHADPAEDTLYRILSKN CAPEWVELNKEIRS+ISEWR SLKKAWA KCSGDHS WVESSEALK QL+EINDKVFRYNLIVPFGRQMFGLKWEKE+ YLEE
Sbjct: 2 ATCLRLGRFTTIDSLSLF------VSTARFSFSSSSSSSSSSSSSSSGKSKT-GKKLMDRLSAVIDAVNDRKLPPELRGQRSNVRSETDIINVVEQRIWHTMEEGKFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSKISEWRKSLKKAWATKCSGDHSEWVESSEALKSQLREINDKVFRYNLIVPFGRQMFGLKWEKELGYLEE 217
BLAST of rna-XM_004497517.3 vs. UniProtKB/TrEMBL
Match: tr|I1L947|I1L947_SOYBN (DnaJ homologue subfamily C member 28 conserved domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_10G063500 PE=4 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 2.022e-112 Identity = 176/221 (79.64%), Postives = 187/221 (84.62%), Query Frame = 0 Query: 4 ATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSS--------GNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
AT LRL RF +++ LSL VST RF SSSSS G SK KKL+DRLSTVIDAVNDRKLPPELRGQR+NVRSETD+INVVEQRIWH+MEEG+FE LPGKGKPLKLDTNPHADPAEDTLYRILSKN APEWVELNKEIRS+ISEWR SLKKAWA KCSGDHS WVESSEALK QL+EINDKVFRYNLIVPFGRQMFGLKWEKE+ YLEE
Sbjct: 2 ATCLRLGRFTTIDSLSLF------VSTARFSFSSSSSSSSSSSSSGKSKT-GKKLMDRLSTVIDAVNDRKLPPELRGQRSNVRSETDIINVVEQRIWHTMEEGKFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGYAPEWVELNKEIRSKISEWRKSLKKAWATKCSGDHSEWVESSEALKSQLREINDKVFRYNLIVPFGRQMFGLKWEKELGYLEE 215
BLAST of rna-XM_004497517.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3STB5|A0A0S3STB5_PHAAN (DnaJ homologue subfamily C member 28 conserved domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G290700 PE=4 SV=1) HSP 1 Score: 329.331 bits (843), Expect = 4.412e-112 Identity = 173/222 (77.93%), Postives = 185/222 (83.33%), Query Frame = 0 Query: 4 ATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSS---------GNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
AT LRL F ++N +L VST RF SSSSSS G SK KK +DRL+ VIDAV+DRKLPPELRGQRNNVRSETD+INVVEQRIWHSMEEGQFE LPGKGKPLKLDTNPHADPAEDTLYRILSKN CAPEWVELNKEIRS+ISEWR+SLKKAWA KC G+HS WVESSE LKLQL+EINDKVFRYNLIVPFGRQMFGLKWEKE+ YLEE
Sbjct: 2 ATCLRLRGFTTINSRALF------VSTTRFSSSSSSSSSSSSSSSSGKSK-TGKKFMDRLTAVIDAVHDRKLPPELRGQRNNVRSETDIINVVEQRIWHSMEEGQFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSKISEWRLSLKKAWATKCGGEHSEWVESSENLKLQLREINDKVFRYNLIVPFGRQMFGLKWEKELGYLEE 216
BLAST of rna-XM_004497517.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TVH2|A0A0L9TVH2_PHAAN (DnaJ homologue subfamily C member 28 conserved domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0183910 PE=4 SV=1) HSP 1 Score: 329.331 bits (843), Expect = 4.412e-112 Identity = 173/222 (77.93%), Postives = 185/222 (83.33%), Query Frame = 0 Query: 4 ATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSS---------GNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
AT LRL F ++N +L VST RF SSSSSS G SK KK +DRL+ VIDAV+DRKLPPELRGQRNNVRSETD+INVVEQRIWHSMEEGQFE LPGKGKPLKLDTNPHADPAEDTLYRILSKN CAPEWVELNKEIRS+ISEWR+SLKKAWA KC G+HS WVESSE LKLQL+EINDKVFRYNLIVPFGRQMFGLKWEKE+ YLEE
Sbjct: 2 ATCLRLRGFTTINSRALF------VSTTRFSSSSSSSSSSSSSSSSGKSK-TGKKFMDRLTAVIDAVHDRKLPPELRGQRNNVRSETDIINVVEQRIWHSMEEGQFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSKISEWRLSLKKAWATKCGGEHSEWVESSENLKLQLREINDKVFRYNLIVPFGRQMFGLKWEKELGYLEE 216
BLAST of rna-XM_004497517.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V1V8|A0A1S3V1V8_VIGRR (DnaJ homolog subfamily C member 28 OS=Vigna radiata var. radiata OX=3916 GN=LOC106770946 PE=4 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 2.969e-111 Identity = 172/222 (77.48%), Postives = 185/222 (83.33%), Query Frame = 0 Query: 4 ATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSS---------GNSKPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 216
AT LRL F +++ +L VST RF SSSSSS G SK KKL+DRL+ VIDAV+DRKLPPELRGQRNNVRSETD+INVVEQRIWHSMEEGQFE LPGKGKPLKLD NPHADPAEDTLYRILSKN CAPEWVELNKEIRS+ISEWR+SLKKAWA KC G+HS WVESSE LKLQL+EINDKVFRYNLIVPFGRQMFGLKWEKE+ YLEE
Sbjct: 2 ATCLRLRGFTTIDSRALF------VSTARFSSSSSSSSSSSSSSSSGKSK-TGKKLMDRLTAVIDAVHDRKLPPELRGQRNNVRSETDIINVVEQRIWHSMEEGQFENLPGKGKPLKLDANPHADPAEDTLYRILSKNGCAPEWVELNKEIRSKISEWRISLKKAWATKCGGEHSQWVESSENLKLQLREINDKVFRYNLIVPFGRQMFGLKWEKELGYLEE 216 The following BLAST results are available for this feature:
BLAST of rna-XM_004497517.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 4 Position : 0 Zoom : x 1
BLAST of rna-XM_004497517.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 2 Position : 0 Zoom : x 1
BLAST of rna-XM_004497517.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004497517.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497517.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497517.3; organism=Cicer arietinum; type=mRNA; length=651bpback to top protein sequence of rna-XM_004497517.3_CaCDCfrontier-NCBI_v1 >rna-XM_004497517.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497517.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497517.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=216bpback to top mRNA from alignment at chr4:21736968..21739243- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004497517.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497517.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497517.3; organism=Cicer arietinum; type=mRNA; length=2276bp; location=Sequence derived from: chr4:21736968..21739243- (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr4:21736968..21739243- >rna-XM_004497517.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497517.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497517.3; organism=Cicer arietinum; type=CDS; length=651bp; location=Sequence derived from: chr4:21736968..21739243- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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