Homology
BLAST of Ca_20874 vs. TrEMBL
Match:
I1MWS9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)
HSP 1 Score: 115.546 bits (288), Expect = 6.152e-24
Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 1 MSLKASYSSENLILPVSDPPNDEDRERLLKSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQV 249
MSLK S SSENL+LPVSDPP D +DD + +GS+MTKRGAFAA+SYMSCAVLLVMFNKAALSSY+FPSAN I LLQ+
Sbjct: 1 MSLKPSNSSENLMLPVSDPPKSHD------ADDKLFKGSAMTKRGAFAAVSYMSCAVLLVMFNKAALSSYNFPSANVITLLQM 77
BLAST of Ca_20874 vs. TrEMBL
Match:
C6TGJ6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)
HSP 1 Score: 115.546 bits (288), Expect = 6.152e-24
Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 1 MSLKASYSSENLILPVSDPPNDEDRERLLKSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQV 249
MSLK S SSENL+LPVSDPP D +DD + +GS+MTKRGAFAA+SYMSCAVLLVMFNKAALSSY+FPSAN I LLQ+
Sbjct: 1 MSLKPSNSSENLMLPVSDPPKSHD------ADDKLFKGSAMTKRGAFAAVSYMSCAVLLVMFNKAALSSYNFPSANVITLLQM 77
BLAST of Ca_20874 vs. TrEMBL
Match:
M5XBU0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007815mg PE=4 SV=1)
HSP 1 Score: 115.161 bits (287), Expect = 8.034e-24
Identity = 60/85 (70.59%), Postives = 71/85 (83.53%), Query Frame = 1
Query: 1 MSLKASYSSENLILPVSDPPNDEDRERLL--KSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQV 249
MSLKAS S +NLILPVSD P D +RERL+ +D+ + RGS+MT+RGA+AAISYM+CAVLLVMFNKAALSSY FPSAN I L Q+
Sbjct: 1 MSLKASSSGKNLILPVSDSPRDLERERLVGDDNDEKLFRGSAMTRRGAYAAISYMACAVLLVMFNKAALSSYKFPSANVITLFQM 85
BLAST of Ca_20874 vs. TrEMBL
Match:
I1M9I8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)
HSP 1 Score: 112.849 bits (281), Expect = 3.987e-23
Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = 1
Query: 1 MSLKASYSSENLILPVSDPPNDEDRERLLKSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQV 249
MSL+ S SSENL+LPVSDPP +D +D+ + +GS+MTKRGAFAA+SYMSCAVLLVMFNKAALSSY+FPSAN I LLQ+
Sbjct: 1 MSLRLSNSSENLMLPVSDPPKTQD------ADNKLFKGSAMTKRGAFAAVSYMSCAVLLVMFNKAALSSYNFPSANVITLLQM 77
BLAST of Ca_20874 vs. TrEMBL
Match:
I3RZB0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)
HSP 1 Score: 112.464 bits (280), Expect = 5.208e-23
Identity = 61/85 (71.76%), Postives = 71/85 (83.53%), Query Frame = 1
Query: 1 MSLK-ASYSSENLILPVSDPPNDEDRERLL-KSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQV 249
MSLK +S SSENL+LPVSDPP D+ K+DD + +GS+MTKRGA+AAISYMSCAVLLV+FNKAALSSYDFPSAN I LLQ+
Sbjct: 2 MSLKPSSNSSENLMLPVSDPPRDQTGGGAAPKADDKLFKGSAMTKRGAYAAISYMSCAVLLVIFNKAALSSYDFPSANVITLLQM 86
BLAST of Ca_20874 vs. TrEMBL
Match:
B9RP33_RICCO (UDP-sugar transporter, putative OS=Ricinus communis GN=RCOM_0923870 PE=4 SV=1)
HSP 1 Score: 109.383 bits (272), Expect = 4.409e-22
Identity = 56/80 (70.00%), Postives = 68/80 (85.00%), Query Frame = 1
Query: 13 ASYSSENLILPVSDPPNDE-DRERLLKSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQV 249
AS SS N ILP+S P+D+ ++ERL+K DD I RGS+MTKRGA+AAISYMSCAVLLV+FNKAALSS++FPSAN I L Q+
Sbjct: 2 ASNSSNNSILPLSTSPSDDKEKERLIKGDDKIFRGSAMTKRGAYAAISYMSCAVLLVIFNKAALSSFNFPSANVITLFQM 81
BLAST of Ca_20874 vs. TrEMBL
Match:
K7KTH9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)
HSP 1 Score: 108.227 bits (269), Expect = 9.821e-22
Identity = 58/83 (69.88%), Postives = 66/83 (79.52%), Query Frame = 1
Query: 1 MSLKASYSSENLILPVSDPPNDEDRERLLKSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQV 249
M LK SYSSENL+LPVSDPPNDEDRE LLK+D+ + R +AAISYMSCAVLLV+FNKAALSSY FPSA+ I LLQ+
Sbjct: 1 MPLKPSYSSENLMLPVSDPPNDEDREWLLKADNY----KTFQTRRIYAAISYMSCAVLLVLFNKAALSSYHFPSASVITLLQM 79
BLAST of Ca_20874 vs. TrEMBL
Match:
K7KTH8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)
HSP 1 Score: 108.227 bits (269), Expect = 9.821e-22
Identity = 58/83 (69.88%), Postives = 66/83 (79.52%), Query Frame = 1
Query: 1 MSLKASYSSENLILPVSDPPNDEDRERLLKSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQV 249
M LK SYSSENL+LPVSDPPNDEDRE LLK+D+ + R +AAISYMSCAVLLV+FNKAALSSY FPSA+ I LLQ+
Sbjct: 1 MPLKPSYSSENLMLPVSDPPNDEDREWLLKADNY----KTFQTRRIYAAISYMSCAVLLVLFNKAALSSYHFPSASVITLLQM 79
BLAST of Ca_20874 vs. TrEMBL
Match:
B9HAF2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_867756 PE=4 SV=1)
HSP 1 Score: 107.842 bits (268), Expect = 1.283e-21
Identity = 58/83 (69.88%), Postives = 66/83 (79.52%), Query Frame = 1
Query: 13 ASYSSENLILPVSDPPNDEDR----ERLLKSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQV 249
AS SS N ILPVS P D++R ERL+K D+ RGSSMTKRGA+AAISYMSCAVLLV+FNKAALSSY+FPSAN I L Q+
Sbjct: 2 ASSSSSNSILPVSVSPLDDERQREKERLIKGDEKAFRGSSMTKRGAYAAISYMSCAVLLVLFNKAALSSYNFPSANVITLFQM 84
BLAST of Ca_20874 vs. TrEMBL
Match:
G7I715_MEDTR (UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Medicago truncatula GN=MTR_1g012590 PE=4 SV=1)
HSP 1 Score: 106.301 bits (264), Expect = 3.732e-21
Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 1
Query: 1 MSLKASYSSENLILPVSDPPNDEDRERLLKSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQV 249
MSLK S SSE +LP+SDPP ++ DD + +GS+MTKRGA+AAISYMSCAVLLVMFNKAALSSY+FPSAN I LLQ+
Sbjct: 1 MSLKTSNSSEKPMLPLSDPPKNQ-------IDDKLFKGSAMTKRGAYAAISYMSCAVLLVMFNKAALSSYNFPSANVITLLQM 76
BLAST of Ca_20874 vs. DB:Swiss
Match:
NSTU3_ARATH (Nucleotide-sugar uncharacterized transporter 3 OS=Arabidopsis thaliana OX=3702 GN=At4g32272 PE=2 SV=1)
HSP 1 Score: 96.2857 bits (238), Expect = 3.043e-24
Identity = 47/78 (60.26%), Postives = 59/78 (75.64%), Query Frame = 1
Query: 28 ENLILPVSDPP----NDEDRERLLKSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQV 249
N +LPVSDPP ND D + + DD + +GS+MTKRGA+AA+SYM+CAV+LV+FNKAALSSYDFP N I L Q+
Sbjct: 3 NNPVLPVSDPPLAGENDSDGKGV---DDRLFKGSAMTKRGAYAALSYMACAVMLVLFNKAALSSYDFPCVNVITLFQM 77
The following BLAST results are available for this feature:
BLAST of Ca_20874 vs. TrEMBL
Analysis Date: 2013-10-24 (
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL )
Total hits: 25
20 40 60 80 100 120 140 160 180 200 220 240 260 Expect = 6.15e-24 / Id = 72.29 Expect = 6.15e-24 / Id = 72.29 Expect = 8.03e-24 / Id = 70.59 Expect = 3.99e-23 / Id = 69.88 Expect = 5.21e-23 / Id = 71.76 Expect = 4.41e-22 / Id = 70.00 Expect = 9.82e-22 / Id = 69.88 Expect = 9.82e-22 / Id = 69.88 Expect = 1.28e-21 / Id = 69.88 Expect = 3.73e-21 / Id = 67.47 Sequence I1MWS9_SOYBN C6TGJ6_SOYBN M5XBU0_PRUPE I1M9I8_SOYBN I3RZB0_LOTJA B9RP33_RICCO K7KTH9_SOYBN K7KTH8_SOYBN B9HAF2_POPTR G7I715_MEDTR
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>Ca_20874_v1.0_kabuli ID=Ca_20874_v1.0_kabuli; Name=Ca_20874; organism=Cicer arietinum; type=mRNA; length=261bp ATGTCTCTGAAAGCATCTTATTCATCGGAGAATCTGATTCTTCCGGTATC CGATCCTCCAAACGATGAAGACCGAGAGAGGCTTTTGAAGAGCGATGATA CGATCCTCAGAGGTTCTTCCATGACTAAACGTGGAGCATTCGCTGCTATC TCTTACATGTCTTGCGCTGTGCTCTTGGTGATGTTCAATAAGGCGGCTCT TTCATCTTATGACTTTCCATCTGCAAATTTCATCGCTCTTCTTCAGGTTC ATCCTCATTAA back to top protein sequence of Ca_20874_v1.0_kabuli
>Ca_20874_v1.0_kabuli ID=Ca_20874_v1.0_kabuli; Name=Ca_20874_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=86bp MSLKASYSSENLILPVSDPPNDEDRERLLKSDDTILRGSSMTKRGAFAAI SYMSCAVLLVMFNKAALSSYDFPSANFIALLQVHPH back to top mRNA from alignment at Ca3:33746126..33746478-
Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_20874_v1.0_kabuli ID=Ca_20874_v1.0_kabuli; Name=Ca_20874; organism=Cicer arietinum; type=mRNA; length=353bp; location=Sequence derived from: Ca3:33746126..33746478- (Cicer arietinumATGTCTCTGAAAGCATCTTATTCATCGGAGAATCTGATTCTTCCGGTATC
CGATCCTCCAAACGATGAAGACCGAGAGAGGCTTTTGAAGAGCGATGATA
CGATCCTCAGAGGTTCTTCCATGACTAAACGTGGAGCATTCGCTGCTATC
TCTTACATGTCTTGCGCTG GTTCGCTTCATACTATTTTTATTTTGAAACC
ACTGTTTAATTAATTAATTAATTGTTTAGGCTTTCATTAATTCTCTATTT
TTGTTTTGTAGTGCTCTTGGTGATGTTCAATAAGGCGGCTCTTTCATCTT
ATGACTTTCCATCTGCAAATTTCATCGCTCTTCTTCAGGTTCATCCTCAT
TAA back to top Coding sequence (CDS) from alignment at Ca3:33746126..33746478-
>Ca_20874_v1.0_kabuli ID=Ca_20874_v1.0_kabuli; Name=Ca_20874; organism=Cicer arietinum; type=CDS; length=261bp; location=Sequence derived from: Ca3:33746126..33746478- (Cicer arietinum ATGTCTCTGAAAGCATCTTATTCATCGGAGAATCTGATTCTTCCGGTATC CGATCCTCCAAACGATGAAGACCGAGAGAGGCTTTTGAAGAGCGATGATA CGATCCTCAGAGGTTCTTCCATGACTAAACGTGGAGCATTCGCTGCTATC TCTTACATGTCTTGCGCTGTGCTCTTGGTGATGTTCAATAAGGCGGCTCT TTCATCTTATGACTTTCCATCTGCAAATTTCATCGCTCTTCTTCAGGTTC ATCCTCATTAA back to top