Lens culinaris

Overview
GenusLens
Speciesculinaris
Common Namelentil
AbbreviationL. culinaris
PloidyDiploid
Chromosome Number2n=14
Genome Size~4 Gbp
Available Markers89,198
Available Maps44
Available QTLs379
Available MTLs10
Available Traits65
Available Genomes1
Libraries
The following libraries are associated with this organism.
Library NameType
LIBEST_025390 LCUSE1NGcDNA
SAMN05180529 Lens culinaris resistance genesclone
EFGC fragment amplified from Lens culinarisclone
CysPr1 fragment amplified from Lens culinarisclone
CTP fragment amplified from Lens culinarisclone
6DCS fragment amplified from Lens culinarisclone
UDPGD fragment amplified from Lens culinarisclone
CYB6 fragment amplified from Lens culinarisclone
lambda gt10clone
tRALS fragment amplified from Lens culinarisclone
CALTL fragment amplified from Lens culinaris genomic DNAclone
Maps
Map Name Map Details
lentil-CDCRobinx964a-46-RIL-2013
Map Type : genetic
Population Type : RIL
lentil-ILL5588xL692-16-1-RIL
Map Type : genetic
Population Type : RIL
lentil-LupaxBG16880-F2
Map Type : genetic
Population Type : F2
lentil-L830xILWL77-F2
Map Type : genetic
Population Type : F2
lentil-ILL5588xILL5722-F5-RIL
Map Type : genetic
Population Type : F5-RIL
lentil-CassabxILL2024-F6
Map Type : genetic
Population Type : F6-RIL
lentil-PrecozxWA8949041-F7
Map Type : genetic
Population Type : F7-RIL
lentil-PrecozxWA8649041-F7-2015
Map Type : genetic
Population Type : F7-RIL
lentil-CDCRobinx964a-46-RIL
Map Type : genetic
Population Type : RIL
lentil-ILL5588xL692-16-1-RIL-1998
Map Type : genetic
Population Type : RIL
lentil-ILL5588xILL7537-F2
Map Type : genetic
Population Type : F2
lentil-ILL7537xILL6002-F2
Map Type : genetic
Population Type : F2
lentil-ILL5588xILL5722-F5-RIL-2012
Map Type : genetic
Population Type : F5-RIL
lentil-EstonxPI320937-F8-RIL
Map Type : genetic
Population Type : F8-RIL
lentil-WA8649090xPrecoz-F6-RIL
Map Type : genetic
Population Type : F6-RIL
lentil-ILL6002xILL5888-F7-RIL
Map Type : genetic
Population Type : F7-RIL
lentil-LupaxBG16880-F2-2007
Map Type : genetic
Population Type : F2
lentil-PrecozxL830-RIL
Map Type : genetic
Population Type : RIL
Lentil-Lupa_X_orientalis-RIL-2017
Software : MapMaker v 3.0b
Map Type : genetic
Population Type : RIL
Population Size : 94
Lentil-Indianhead_x_Northfield-RIL-2016
Map Type : genetic
Population Type : RIL
Population Size : 117
Lentil-Indianhead_x_Digger-RIL-2016
Map Type : genetic
Population Type : RIL
Population Size : 112
Lentil- Northfield_x_Digger-RIL-2016
Map Type : genetic
Population Type : RIL
Population Size : 114
Lentil-Consensus-RIL-2016
Software : MergeMap
Map Type : genetic
Population Type : RIL
Lentil-LR8-F1-2018
Population Type : F1
Population Size : 120
Map Type : genetic
Lentil-LR11-F1-2018
Population Type : F1
Population Size : 118
Map Type : genetic
Lentil-LR39-F1-2018
Population Type : F1
Population Size : 96
Map Type : genetic
Lentil-LR8LR11LR39Consensus-F1-2018
Map Type : genetic
Lentil-ILL6002_x_ILL5888-RIL-2016
Map Type : genetic
Population Type : RIL
Population Size : 132
Lentil-PI 320937_x_Eston-RIL
Map Type : genetic
Population Type : RIL
Population Size : 96
Lentil-WA864909_x_Precoz-RIL-2017
Software : JoinMap v. 4.0
Population Type : RIL
Population Size : 94
Map Type : genetic
Lentil-CDC_Robin/964a-46-RIL-2017
Map Type : genetic
Population Type : RIL
Population Size : 127
Lentil-K192-1/K191-2-F6-RIL
Map Type : genetic
Population Type : RIL
Population Size : 173
Lentil-ILL2024/ILL6788-F6-RIL
Map Type : genetic
Population Type : RIL
Population Size : 178
Lentil-WA8649090/Precoz-F10-RIL
Map Type : genetic
Population Type : RIL
Population Size : 94
Lentil-JL-3/PDL-1-F2
Map Type : genetic
Population Type : F2
Population Size : 101
Lentil-BM4/L4602-F2
Map Type : genetic
Population Type : F2
Population Size : 149
Lentil-BM4/L4602-F3
Map Type : genetic
Population Type : F3
Population Size : 149
Lentil-BM4/L7903-F3
Map Type : genetic
Population Type : F3
Population Size : 94
Lentil-BM4/L7903-F6
Map Type : genetic
Population Type : F6
Population Size : 146
Germplasm
NameType
10-2-B-2accession
10-3-Y-26accession
1220/11accession
210/11accession
381277accession
39-S-66Laccession
964a-46accession
Aarialaccession
ADIaccession
AKCA MUCIMEGIaccession
Alpoaccession
ALTAMURAaccession
Arunaccession
B-77accession
Baitadi 6Aaccession
Bari Masuro-4accession
BG16880accession
BM-4accession
BM4/L4602-F2population
BM4/L4602-F3population

Page of 34
Unigenes
Below is a list of unigenes available for Lens culinaris. Click the unigene name for further details.
Unigene NameAnalysis NameDate ConstructedStats
Lens culinaris unigene v1Lens culinaris unigene v12010-12-27Reads: 9,434
Contigs: 961
Singlets: 3,092
Transcripts

Below is a list of transcript assemblies that are available for Lens culinaris. Click the assembly name for further details.

 
Unigene Name Analysis Name Date Constructed Stats
Lens culinaris RefTrans V2 L. culinaris CSFL RefTrans V2 2017-08-28 RNA-Seq Reads: 1.1 billion
EST Reads: 9,539
Assembled Contigs: 33,613
Lens culinaris RefTrans V1 L. culinaris CSFL RefTrans V1 2015-12-23 RNA-Seq Reads: 237 million
EST Reads: 9,434
Assembled Contigs: 33,936
Lens culinaris unigene v1 Lens culinaris unigene v1 2010-12-27 Reads: 9,434
Contigs: 961
Singlets: 3,092