Lens culinaris

Overview
GenusLens
Speciesculinaris
Common Namelentil
AbbreviationL. culinaris
PloidyDiploid
Chromosome Number2n=14
Genome Size~4 Gbp
Available Markers84,149
Available Maps38
Available QTLs355
Available MTLs10
Available Traits60
Available Genomes 
Libraries
The following libraries are associated with this organism.
Library NameType
LIBEST_025390 LCUSE1NGcDNA
EFGC fragment amplified from Lens culinarisclone
CysPr1 fragment amplified from Lens culinarisclone
CTP fragment amplified from Lens culinarisclone
6DCS fragment amplified from Lens culinarisclone
UDPGD fragment amplified from Lens culinarisclone
CYB6 fragment amplified from Lens culinarisclone
lambda gt10clone
tRALS fragment amplified from Lens culinarisclone
CALTL fragment amplified from Lens culinaris genomic DNAclone
Maps
Map Name Map Details
lentil-CDCRobinx964a-46-RIL-2013
Map Type : genetic
Population Type : RIL
lentil-ILL5588xL692-16-1-RIL
Map Type : genetic
Population Type : RIL
lentil-LupaxBG16880-F2
Map Type : genetic
Population Type : F2
lentil-L830xILWL77-F2
Map Type : genetic
Population Type : F2
lentil-ILL5588xILL5722-F5-RIL
Map Type : genetic
Population Type : F5-RIL
lentil-CassabxILL2024-F6
Map Type : genetic
Population Type : F6-RIL
lentil-PrecozxWA8949041-F7
Map Type : genetic
Population Type : F7-RIL
lentil-PrecozxWA8649041-F7-2015
Map Type : genetic
Population Type : F7-RIL
lentil-CDCRobinx964a-46-RIL
Map Type : genetic
Population Type : RIL
lentil-ILL5588xL692-16-1-RIL-1998
Map Type : genetic
Population Type : RIL
lentil-ILL5588xILL7537-F2
Map Type : genetic
Population Type : F2
lentil-ILL7537xILL6002-F2
Map Type : genetic
Population Type : F2
lentil-ILL5588xILL5722-F5-RIL-2012
Map Type : genetic
Population Type : F5-RIL
lentil-EstonxPI320937-F8-RIL
Map Type : genetic
Population Type : F8-RIL
lentil-WA8649090xPrecoz-F6-RIL
Map Type : genetic
Population Type : F6-RIL
lentil-ILL6002xILL5888-F7-RIL
Map Type : genetic
Population Type : F7-RIL
lentil-LupaxBG16880-F2-2007
Map Type : genetic
Population Type : F2
lentil-PrecozxL830-RIL
Map Type : genetic
Population Type : RIL
Lentil-Lupa_X_orientalis-RIL-2017
Software : MapMaker v 3.0b
Map Type : genetic
Population Type : RIL
Population Size : 94
Lentil-Indianhead_x_Northfield-RIL-2016
Map Type : genetic
Population Type : RIL
Population Size : 117
Lentil-Indianhead_x_Digger-RIL-2016
Map Type : genetic
Population Type : RIL
Population Size : 112
Lentil- Northfield_x_Digger-RIL-2016
Map Type : genetic
Population Type : RIL
Population Size : 114
Lentil-Consensus-RIL-2016
Software : MergeMap
Map Type : genetic
Population Type : RIL
Lentil-LR8-F1-2018
Population Type : F1
Population Size : 120
Map Type : genetic
Lentil-LR11-F1-2018
Population Type : F1
Population Size : 118
Map Type : genetic
Lentil-LR39-F1-2018
Population Type : F1
Population Size : 96
Map Type : genetic
Lentil-LR8LR11LR39Consensus-F1-2018
Map Type : genetic
Lentil-ILL6002_x_ILL5888-RIL-2016
Map Type : genetic
Population Type : RIL
Population Size : 132
Lentil-PI 320937_x_Eston-RIL
Map Type : genetic
Population Type : RIL
Population Size : 96
Lentil-WA864909_x_Precoz-RIL-2017
Software : JoinMap v. 4.0
Population Type : RIL
Population Size : 94
Map Type : genetic
Lentil-CDC_Robin/964a-46-RIL-2017
Map Type : genetic
Population Type : RIL
Population Size : 127
Lentil-K192-1/K191-2-F6-RIL
Map Type : genetic
Population Type : RIL
Population Size : 173
Lentil-ILL2024/ILL6788-F6-RIL
Map Type : genetic
Population Type : RIL
Population Size : 178
Lentil-WA8649090/Precoz-F10-RIL
Map Type : genetic
Population Type : RIL
Population Size : 94
Lentil-JL-3/PDL-1-F2
Map Type : genetic
Population Type : F2
Population Size : 101
Germplasm
NameType
10-2-B-2cultivar
10-3-Y-26cultivar
1220/11breeding_research_material
210/11breeding_research_material
381277cultivar
39-S-66Lcultivar
964a-46cultivar
Aarialcultivar
ADIcultivar
AKCA MUCIMEGIcultivar
Alpocultivar
ALTAMURAcultivar
Aruncultivar
B-77cultivar
Baitadi 6Acultivar
Bari Masuro-4cultivar
BG16880breeding_research_material
BR-25-1cultivar
Brewercultivar
Cassabbreeding_research_material

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Unigenes
Below is a list of unigenes available for Lens culinaris. Click the unigene name for further details.
Unigene NameAnalysis NameDate ConstructedStats
Lens culinaris unigene v1Lens culinaris unigene v12010-12-27Reads: 9,434
Contigs: 961
Singlets: 3,092
Transcripts

Below is a list of transcript assemblies that are available for Lens culinaris. Click the assembly name for further details.

 
Unigene Name Analysis Name Date Constructed Stats
Lens culinaris RefTrans V2 L. culinaris CSFL RefTrans V2 2017-08-28 RNA-Seq Reads: 1.1 billion
EST Reads: 9,539
Assembled Contigs: 33,613
Lens culinaris RefTrans V1 L. culinaris CSFL RefTrans V1 2015-12-23 RNA-Seq Reads: 237 million
EST Reads: 9,434
Assembled Contigs: 33,936
Lens culinaris unigene v1 Lens culinaris unigene v1 2010-12-27 Reads: 9,434
Contigs: 961
Singlets: 3,092